Lag0018403 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0018403
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionGag/pol protein
Locationchr5: 25982531 .. 25987183 (+)
RNA-Seq ExpressionLag0018403
SyntenyLag0018403
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAGGTATTTATACCCCTCTTCGTCGCTGAAGAAGGGACTCCGAATTCTATCCCTAAACACTATTCGATATTTTCTACTCTCTCCTCTTGCTCTTACTTTTCCACTCCCTACCGTTCTATTTGCTGACTTAAGCATCGGAGCTGGTGTGGCGAGCACCACACCGGTGTGCAGGTTTACTGTCTTGCAGGCCACGTCTTCCCCCTTATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAAGTGAGTTCCTCTGGCCAAAATCGACCATCAACAAACATCATCAAGAAATTTCCAAATATCATATGCATATGTAAAATGTGAAAGTTTATCACATATATTTTTATCTAAAGCACAACATATGATATTTATAGCTTGAGCATTTAACGAAAGCATTTCATTATTCAATTTTGATTTTGATAAATCATTTTCACAAACATACCAAATATCAAAATCAATAGCAAGCAAAAACGTTTTCATTCTATGGCTCCAAACATCATATTTTTTACCATCAAACAATGGAGGTTTATCAATAAATTAACTTTCCATAAAATCTAAAGTTGTCATAGCTCTAGCAATTAAGCTTATCAAGAAAAAAATATTTCAAGAAGAGCAACCCGCTCTGATACCAATTGTTGGATCGATATGACAACCCTAGAGGGGGGTGGGGGTGAATAGGGTTTAATTCAATTTTATAAATTTTTTACTACGGTGGGTCCAATTTAAACAAATAAGTGAACTTTTTACAAATAATTAATTTTAACACAAGTTGATAAACAAATTAGAAATATGTTTCAAGCACAAAAAATAATTCCAAATGTAAATATTGTTCATAAACATTAACAATAAATTATAGGAATTAATTTCATGCAAATAACGATAAAGAAAATTACTTGCAAAAATTAAATAGTGGAGGGTTAGAGAAAATAACACCAGAAATTTATAGTGGTTCGGAAAACGGCCTACTCCACTCCCCAAGCTCCTCTTGGGTATTCGATTCAAGAACACGACTCTTTCCACGACTTAGAGTCCAACCGGTACAATGTTCTCTTTTCAGGAGCAAGAACAAACCCGATCCTTTCCACGGTTTAGGATCAAACCGTTACAACCGCTCCTTTTGGGCTCAAGAACAACCCTTACAAGATTTGAAAATTTCAAGAACAAAATTACAAACTCTCTCAAAGAGTGGATATACAAATTTTCGCTCACAAATTTGTAAGAAAAATTCTTACAAATTAATGCCCTCAAATGGCTAAGAAAAATAAAATTGAAAGCTCAAGAATTCTCTCAAAAATAAAATCTCACAATAAATTTAAATGAACATTGAAGAATTTGAGAGAAGAAACATGTAGAATTTGGAGAGAATTTAGAGAGGGAAATTGTTGTTATTTTGTGAAAGAACGGGGGTATAAATAAGAAGAATATGAGTTGAAAGAAATTTGAAATTTGAGCTTAATTTGGACCATTGGATTTGAGTTAAAGAAAAATAAAGGGTGGAGATTAAAAGAAATTAAATATAAAATAAATAATAAAATAATATTAAAAAAACTTTTTTTTTTTAATTTTAGAAAACCATCTAACGGTAAACTCAAAACTCAAAACATAATAATAATAATAATAATAATAGTAATATATAAAAGAATGAGAGTAACGGTAAAGTAAAAAAAAAAACAAACTTTTTCAAACCAGCATTTAATGATTCTGAATTTTGATTTTTATTTTGATTTTTTTTTAAATTACCGTTACACACAATGTTTTTTTTTTTTAAATAAAATTATATATATATTTAAATAACAAAAAATGTCCATGTGTTGCTCTCCCATTGGTCCACGTGTTGTCGCCAGATTAATCCATGATGCTGACTCAGCTGCCACGTCATCAGTACATGTATTTTTCGTTAAAACTTGTTTCGGCTATAACTTCTTCGTTTTAGCTCCGATTGGAGTGATTCAAGAGGCGTTGGAATCGTTGTTCCGAGCTCTACGCTATGGGCACATTAAAACAATGAGATTTTCAGTAATTATAAATTGGGTTTGTTATCATCAAAACATTGATTAATTAATTAATTAAAATTAATTAATTTGAGATTAAGGGCCAAAAAGCCAACAGATACCAATCTAATCCAGGGTTAGACCACTGGACTGTAGTGAAAAACATCATCAAGTATCTTCGGAGAACGAGGGACTATCAGCTTGTGTATGGCGCTAAGGATTTGATCCTTACAGAATACACAGACTGTGACTTTCAGACTGATAAGGATTCTAAGAAACCTACATCAGGATCAGTGTTTACCCTCAATGTGGATGCCCTAAAGGATAGTATGCTACCGCCTACGTAATCATAACCTTGCTACCTCTAGCAATGTTTGTTGTTATTGAATTTAGGGAAAAATACACTTTTGGTCCCTGAGGTTTAGGTTAAGTTACACTTTGGTCCCTGAGTTTTCAAACTCAACAAAAATACCCCTGCGGTTTGAGATAGGCAGCATTTTGGTCCATGCCGTCTATTTTTCTGTTTAATCCTAACGACTGTTGACGTGACACTATTATTTTAATAAAAAACAATAAAAAACAATAAAAATATTTTTGTTTTAATTATTTTTGAAAACTCAACCCTCAACCCTCAACCCTCATCTTCATCCTCTTCCATCAACCCCTCATTCTTCTTAAAATTTCTAGCAGCCGGCGGCGACTTTTTTTTCTCTTCTCTTTTATTCTCCTTTCTTTTTCTCTTACAACATTTTTCTTCTTTTCTTTTTTTTTAAAAAAAAAATACAAGAGGGAGGAGGGACCTCTCTCCTCCTCCGTTTCGCACCAGAAATGGAGGAGGAGGGAGGTCCCTCCTCCCTCTTGTATTTTTTTTTAAAAAAGAAAAGAATAAAAATGGGGTAAGAGAAGAAGAAAGGAGAACAAAAGAGAAGAACAATAAGAAAAAAAAAGTCACCGGCGACAGCGAGCGGTGGTCGGCCGCCGAGTGCCGGGTGCCGGAGATTTGAAGAAGAAGAATGAGGGGTTGAGGGAAGAGGATGAAGAAGAGGGTTGAGGGTTGAGTTTTCAAAAATAATTAAAATAATAATATTTTTATAGTTTTTTTATTGATTTCTATTTATTTTTATTTTAAAATAAAAAAATACTTTTTTTTTATAAAATAATAGTGCCTGTAGACCCCTAAATTTTTCCGATATTTTATTCTTTTAACTGATTTTGTTTTTTAAAATGAAAGGAAAAAAAAGAATATTCTAGAGGATTTAATTTTCCAATTCAAATATTATTAAATATGGTAGAAATATTTTATTTTAATTAACTGATTTGCCAAATCAAATATTATGTTTATTTGGCAAGGTTAATTAAACAAAATATTATGTTTATTTGATTGTGTTGAAGGAGAAATTTCGACCAATCACAAATTTCCACGTCATTAATATAAATTAATGATAAAATAAATTTGGGACCAATTACACATTTACACGTGTGCCTAAATTAAATTAATAGACATTAAAATTCGGCAAATCAAAGGATGCTACTTGTCTATTAGTGATCCATCAGATAACATCAGTCAAGTTCAATCAGATTATGCCACGTGGCAATTGGACCTAAGCCCAAGCCCATATGAGGTCCATCAAACTCTATAAATAGAGGAGGCCACCATTCATTCAGGGGGGATTCAGATTTGGAGATTCAGATCAGAGAACTCAGAGTCCAGAGAATTCTGCCAGAGTCCAGAGTCATCAGAAGTCAGAGAGTCTAGAGAATTCAGAAGATCCAAGATTCAAAATTCAACCAACTCAAGACTCAGAAGGTTTGAAGACTAGAAGACTCTAAGAAGAGATCAATAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAAGCCGACCATCCAAGAAGAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGTCGATCATCGAAGAAGATCAACAAGTCACAACAGGTCGATCCAAGAGATCATTAAGCCAACAGGCCGATCATCCAAGAAGATCATCAAGTCAACAGGCCGATCCAAGAGATCATCAACCTAGCAAGTCGATCATCCAAGAAGCTCAACAAACCAGCCCAAGAAGATCAAGAAGCTAGAGACCAAAGTTTATATATTTAAAAGAGAGAATAAGAGGATTAAAGTTAGAGATTGTACACCCACACGCATACAACATTAATACAATATATTATTTATTCCATGTGTCTCCATCCTCGAAGTTACGTGTGAACAGATTGGCACGCCCAGTGGGACCATCTCTACCTCTCGTCTCTCTCTCTTATCTCAAAACACAAGTGTAAACATGTCGTTCAAGACTTCTTCAATGGTCGTTGTCATGAACAAGTCTTACATGGGTTCTACTGCCCATTGTTGCTTCAATGAACTGACGTTGCAAGAAGATAAAGCTTTTATCGTTGCAGGTCAAGAAACAACCTTGCAGGGGCATATACTAGTGACAAGTTTATTGTTAAGTATAACCCTCTGTTTGAACCTGATTCTGACGTAGTGACTATCATGATGACTGAGACAAGAACTATGGAAGAAAGAATGATTGAGATGCAAGAGCACATCAACAACTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATCGCGCAACTAAAGTGCTAA

mRNA sequence

ATGAACAGGTATTTATACCCCTCTTCGTCGCTGAAGAAGGGACTCCGAATTCTATCCCTAAACACTATTCGATATTTTCTACTCTCTCCTCTTGCTCTTACTTTTCCACTCCCTACCGTTCTATTTGCTGACTTAAGCATCGGAGCTGGTGTGGCGAGCACCACACCGGTGTGCAGGTTTACTGTCTTGCAGGCCACGTCTTCCCCCTTATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAAGGCCAAAAAGCCAACAGATACCAATCTAATCCAGGGTTAGACCACTGGACTGTAGTGAAAAACATCATCAAGTATCTTCGGAGAACGAGGGACTATCAGCTTGTGTATGGCGCTAAGGATTTGATCCTTACAGAATACACAGACTGTGACTTTCAGACTGATAAGGATTCTAAGAAACCTACATCAGGATCAGTGTTTACCCTCAATGTGGATGCCCTAAAGGATAGTATGCTACCGCCTACATCAGAGAACTCAGAGTCCAGAGAATTCTGCCAGAGTCCAGAGTCATCAGAAGTCAGAGAGTCTAGAGAATTCAGAAGATCCAAGATTCAAAATTCAACCAACTCAAGACTCAGAAGGTCAAGAAACAACCTTGCAGGGGCATATACTAGTGACAAGTTTATTGTTAAGTATAACCCTCTGTTTGAACCTGATTCTGACGTAGTGACTATCATGATGACTGAGACAAGAACTATGGAAGAAAGAATGATTGAGATGCAAGAGCACATCAACAACTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATCGCGCAACTAAAGTGCTAA

Coding sequence (CDS)

ATGAACAGGTATTTATACCCCTCTTCGTCGCTGAAGAAGGGACTCCGAATTCTATCCCTAAACACTATTCGATATTTTCTACTCTCTCCTCTTGCTCTTACTTTTCCACTCCCTACCGTTCTATTTGCTGACTTAAGCATCGGAGCTGGTGTGGCGAGCACCACACCGGTGTGCAGGTTTACTGTCTTGCAGGCCACGTCTTCCCCCTTATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAAGGCCAAAAAGCCAACAGATACCAATCTAATCCAGGGTTAGACCACTGGACTGTAGTGAAAAACATCATCAAGTATCTTCGGAGAACGAGGGACTATCAGCTTGTGTATGGCGCTAAGGATTTGATCCTTACAGAATACACAGACTGTGACTTTCAGACTGATAAGGATTCTAAGAAACCTACATCAGGATCAGTGTTTACCCTCAATGTGGATGCCCTAAAGGATAGTATGCTACCGCCTACATCAGAGAACTCAGAGTCCAGAGAATTCTGCCAGAGTCCAGAGTCATCAGAAGTCAGAGAGTCTAGAGAATTCAGAAGATCCAAGATTCAAAATTCAACCAACTCAAGACTCAGAAGGTCAAGAAACAACCTTGCAGGGGCATATACTAGTGACAAGTTTATTGTTAAGTATAACCCTCTGTTTGAACCTGATTCTGACGTAGTGACTATCATGATGACTGAGACAAGAACTATGGAAGAAAGAATGATTGAGATGCAAGAGCACATCAACAACTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATCGCGCAACTAAAGTGCTAA

Protein sequence

MNRYLYPSSSLKKGLRILSLNTIRYFLLSPLALTFPLPTVLFADLSIGAGVASTTPVCRFTVLQATSSPLSTNLPLVAREGQGQKANRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDALKDSMLPPTSENSESREFCQSPESSEVRESREFRRSKIQNSTNSRLRRSRNNLAGAYTSDKFIVKYNPLFEPDSDVVTIMMTETRTMEERMIEMQEHINNLMKAIEEKDSQIAQLKC
Homology
[Close]
BLAST of Lag0018403 vs. NCBI nr
Match: TYK16417.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-23
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0 

Query: 87  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGS 146
           +RYQSNPGLDHWTVVK I+KYLRRTRDY LVYGAKDLILT YTD DFQTDKDS+K TSGS
Sbjct: 288 SRYQSNPGLDHWTVVKMILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGS 347

Query: 147 VFTLNVDAL 156
           VFTLN  A+
Sbjct: 348 VFTLNGGAV 356

[Close]
BLAST of Lag0018403 vs. NCBI nr
Match: KAA0062926.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-23
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0 

Query: 87  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGS 146
           +RYQSNPGLDHWTVVK I+KYLRRTRDY LVYGAKDLILT YTD DFQTDKDS+K TSGS
Sbjct: 288 SRYQSNPGLDHWTVVKMILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGS 347

Query: 147 VFTLNVDAL 156
           VFTLN  A+
Sbjct: 348 VFTLNGGAV 356

[Close]
BLAST of Lag0018403 vs. NCBI nr
Match: KAA0050103.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 120.6 bits (301), Expect = 2.2e-23
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0 

Query: 87  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGS 146
           +RYQSNPGLDHWTVVK I+KYLRRTRDY LVYGAKDLILT YTD DFQTDKDS+K TSGS
Sbjct: 267 SRYQSNPGLDHWTVVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGS 326

Query: 147 VFTLNVDAL 156
           VFTLN  A+
Sbjct: 327 VFTLNGGAV 335

[Close]
BLAST of Lag0018403 vs. NCBI nr
Match: TYK25899.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 120.2 bits (300), Expect = 2.8e-23
Identity = 54/65 (83.08%), Postives = 60/65 (92.31%), Query Frame = 0 

Query: 87  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGS 146
           +RYQSNPG DHWTVVKNI+KYLRRT+DY LVYG KDLILTEYTD DFQTDKD++K TSGS
Sbjct: 116 SRYQSNPGRDHWTVVKNILKYLRRTKDYMLVYGTKDLILTEYTDSDFQTDKDARKSTSGS 175

Query: 147 VFTLN 152
           +FTLN
Sbjct: 176 IFTLN 180

[Close]
BLAST of Lag0018403 vs. NCBI nr
Match: KAA0061170.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 119.8 bits (299), Expect = 3.7e-23
Identity = 57/69 (82.61%), Postives = 61/69 (88.41%), Query Frame = 0 

Query: 87  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGS 146
           +RYQSNPGLDHWT VK I+KYLRRTRDY LVYGAKDLILT YTD DFQTDKDS+K TSGS
Sbjct: 199 SRYQSNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGS 258

Query: 147 VFTLNVDAL 156
           VFTLN  A+
Sbjct: 259 VFTLNEGAV 267

[Close]
BLAST of Lag0018403 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.7e-08
Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 0 

Query: 87   NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGS 146
            +R+  NPG +HW  VK I++YLR T    L +G  D IL  YTD D   D D++K ++G 
Sbjct: 1137 SRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGY 1196

Query: 147  VFTLNVDAL 156
            +FT +  A+
Sbjct: 1197 LFTFSGGAI 1205

[Close]
BLAST of Lag0018403 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.0e-04
Identity = 23/66 (34.85%), Postives = 40/66 (60.61%), Query Frame = 0 

Query: 87  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVY-GAKDLILTEYTDCDFQTDKDSKKPTSG 146
           +++ S+P   HW  +K +++YL+ T+ Y L +  A    L  Y+D D+  D +S++ TSG
Sbjct: 32  SQFASDPCPTHWQALKRVLRYLQSTQTYGLEFTRAGTAKLVGYSDADWAGDVESRRSTSG 91

Query: 147 SVFTLN 152
            +F LN
Sbjct: 92  YLFKLN 97

[Close]
BLAST of Lag0018403 vs. ExPASy TrEMBL
Match: A0A5D3CWZ1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002130 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.1e-24
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0 

Query: 87  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGS 146
           +RYQSNPGLDHWTVVK I+KYLRRTRDY LVYGAKDLILT YTD DFQTDKDS+K TSGS
Sbjct: 288 SRYQSNPGLDHWTVVKMILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGS 347

Query: 147 VFTLNVDAL 156
           VFTLN  A+
Sbjct: 348 VFTLNGGAV 356

[Close]
BLAST of Lag0018403 vs. ExPASy TrEMBL
Match: A0A5A7V901 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00180 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.1e-24
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0 

Query: 87  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGS 146
           +RYQSNPGLDHWTVVK I+KYLRRTRDY LVYGAKDLILT YTD DFQTDKDS+K TSGS
Sbjct: 288 SRYQSNPGLDHWTVVKMILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGS 347

Query: 147 VFTLNVDAL 156
           VFTLN  A+
Sbjct: 348 VFTLNGGAV 356

[Close]
BLAST of Lag0018403 vs. ExPASy TrEMBL
Match: A0A5A7U2H0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001170 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.0e-23
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0 

Query: 87  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGS 146
           +RYQSNPGLDHWTVVK I+KYLRRTRDY LVYGAKDLILT YTD DFQTDKDS+K TSGS
Sbjct: 267 SRYQSNPGLDHWTVVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGS 326

Query: 147 VFTLNVDAL 156
           VFTLN  A+
Sbjct: 327 VFTLNGGAV 335

[Close]
BLAST of Lag0018403 vs. ExPASy TrEMBL
Match: A0A5D3DRC2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G001290 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-23
Identity = 54/65 (83.08%), Postives = 60/65 (92.31%), Query Frame = 0 

Query: 87  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGS 146
           +RYQSNPG DHWTVVKNI+KYLRRT+DY LVYG KDLILTEYTD DFQTDKD++K TSGS
Sbjct: 116 SRYQSNPGRDHWTVVKNILKYLRRTKDYMLVYGTKDLILTEYTDSDFQTDKDARKSTSGS 175

Query: 147 VFTLN 152
           +FTLN
Sbjct: 176 IFTLN 180

[Close]
BLAST of Lag0018403 vs. ExPASy TrEMBL
Match: A0A5A7V1F5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00440 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-23
Identity = 57/69 (82.61%), Postives = 61/69 (88.41%), Query Frame = 0 

Query: 87  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGS 146
           +RYQSNPGLDHWT VK I+KYLRRTRDY LVYGAKDLILT YTD DFQTDKDS+K TSGS
Sbjct: 199 SRYQSNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGS 258

Query: 147 VFTLNVDAL 156
           VFTLN  A+
Sbjct: 259 VFTLNEGAV 267

The following BLAST results are available for this feature:
BLAST of Lag0018403 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK16417.11.3e-2384.06gag/pol protein [Cucumis melo var. makuwa][more]
KAA0062926.11.3e-2384.06gag/pol protein [Cucumis melo var. makuwa][more]
KAA0050103.12.2e-2384.06gag/pol protein [Cucumis melo var. makuwa][more]
TYK25899.12.8e-2383.08gag/pol protein [Cucumis melo var. makuwa][more]
KAA0061170.13.7e-2382.61gag/pol protein [Cucumis melo var. makuwa][more]
BLAST of Lag0018403 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P109782.7e-0842.03Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P0CV723.0e-0434.85Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P... [more]
BLAST of Lag0018403 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CWZ16.1e-2484.06Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00213... [more]
A0A5A7V9016.1e-2484.06Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G0018... [more]
A0A5A7U2H01.0e-2384.06Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G0011... [more]
A0A5D3DRC21.4e-2383.08Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G0012... [more]
A0A5A7V1F51.8e-2382.61Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G0044... [more]
BLAST of Lag0018403 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 245..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..201

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0018403.1Lag0018403.1mRNA