Lag0017506 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATGCCTTCTTTGGTTCTCATTCTCCTATTCTTATCAACATTGCATGCATATGATGCTCGTCATCTTCGATTCTTCGAGATCAGTTTGAGTTCTGTTTCAAGGATCGAACAAGCGTTTTGGACAAATCAGCTAACGAGAAGTTTTGACAAAAACGATAGTAACAAGGTTTCTTCTATGGAGATTGTTGGAGTTGAAATATTACAGGTATATTAAATATATCTCATCTCCCTTAGTTCTTGTGCTTTCTAAGTATCACAATTTTCAATTCTTAACCTAATAACTATATGAGAAAGAGAAGATTGAGTAAAACTTATCTAGATATATTAGCATGCATTTTTATTGATATTTCTATATCTATCAAAAAAAGGCTCAACATGGATATACGAGAAGATACCAACTTCTTTTCTTTTTAAAATATTAGAGATATTGACAAAATATCATATAATATATCAACAATTCGATAAAGTGTCGAGGATATGCGTATAAGAACAAATAATAATGATCAAGAGCTTATTCTATATATTTAAAAATTCAAACCATTCTAACGTGAGAATTATAAATTACGATCATTTCCATGATCTTTTGTCGAACTATTCACCAACATATTATCATTTTATCATTATTTCTATTTACATTTTTATAAACTTGAAATCTCATCATTTCCATCAACATCAACATTTAATGCCCGGGTCAAGACAAGCCATTAATATAGACAAAAGCATATGAAATGATAATAAATGCATGGAAAAAAAGGATTTGGAAATAGTGAGTGTGCTGCCATTAATGGACCTTGGAATTTTAGCAGGGAATGAAGAAGCATAGAAGGTTGGTAATGGAGATTCCAATGAAAGACAAAGACAAAGACAAAGACAAAGTGATGAACTCTGAGGAAAATGAGGTTGGAGAAGACATGGTAGTGATGGATTATGCACAACCTCACAGGAAACCTCCTATTCACAATGAAAAACCCTAG ATGGCCATGCCTTCTTTGGTTCTCATTCTCCTATTCTTATCAACATTGCATGCATATGATGCTCGTCATCTTCGATTCTTCGAGATCAGTTTGAGTTCTGTTTCAAGGATCGAACAAGCGTTTTGGACAAATCAGCTAACGAGAAGTTTTGACAAAAACGATAGTAACAAGGTTTCTTCTATGGAGATTGTTGGAGTTGAAATATTACAGGGAATGAAGAAGCATAGAAGGTTGGTAATGGAGATTCCAATGAAAGACAAAGACAAAGACAAAGACAAAGTGATGAACTCTGAGGAAAATGAGGTTGGAGAAGACATGGTAGTGATGGATTATGCACAACCTCACAGGAAACCTCCTATTCACAATGAAAAACCCTAG ATGGCCATGCCTTCTTTGGTTCTCATTCTCCTATTCTTATCAACATTGCATGCATATGATGCTCGTCATCTTCGATTCTTCGAGATCAGTTTGAGTTCTGTTTCAAGGATCGAACAAGCGTTTTGGACAAATCAGCTAACGAGAAGTTTTGACAAAAACGATAGTAACAAGGTTTCTTCTATGGAGATTGTTGGAGTTGAAATATTACAGGGAATGAAGAAGCATAGAAGGTTGGTAATGGAGATTCCAATGAAAGACAAAGACAAAGACAAAGACAAAGTGATGAACTCTGAGGAAAATGAGGTTGGAGAAGACATGGTAGTGATGGATTATGCACAACCTCACAGGAAACCTCCTATTCACAATGAAAAACCCTAG MAMPSLVLILLFLSTLHAYDARHLRFFEISLSSVSRIEQAFWTNQLTRSFDKNDSNKVSSMEIVGVEILQGMKKHRRLVMEIPMKDKDKDKDKVMNSEENEVGEDMVVMDYAQPHRKPPIHNEKP Homology
BLAST of Lag0017506 vs. NCBI nr
Match: XP_023540680.1 (uncharacterized protein LOC111800973 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 145.2 bits (365), Expect = 3.8e-31 Identity = 86/129 (66.67%), Postives = 98/129 (75.97%), Query Frame = 0
BLAST of Lag0017506 vs. NCBI nr
Match: KAG7028383.1 (Root meristem growth factor 6 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 143.3 bits (360), Expect = 1.4e-30 Identity = 86/129 (66.67%), Postives = 98/129 (75.97%), Query Frame = 0
BLAST of Lag0017506 vs. NCBI nr
Match: XP_023005579.1 (uncharacterized protein LOC111498521 [Cucurbita maxima]) HSP 1 Score: 142.1 bits (357), Expect = 3.2e-30 Identity = 85/131 (64.89%), Postives = 98/131 (74.81%), Query Frame = 0
BLAST of Lag0017506 vs. NCBI nr
Match: XP_038905997.1 (uncharacterized protein LOC120091906 isoform X2 [Benincasa hispida]) HSP 1 Score: 136.0 bits (341), Expect = 2.3e-28 Identity = 86/131 (65.65%), Postives = 100/131 (76.34%), Query Frame = 0
BLAST of Lag0017506 vs. NCBI nr
Match: XP_038905996.1 (uncharacterized protein LOC120091906 isoform X1 [Benincasa hispida]) HSP 1 Score: 132.9 bits (333), Expect = 1.9e-27 Identity = 87/132 (65.91%), Postives = 100/132 (75.76%), Query Frame = 0
BLAST of Lag0017506 vs. ExPASy Swiss-Prot
Match: Q93VK8 (Protein GOLVEN 1 OS=Arabidopsis thaliana OX=3702 GN=GLV1 PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 8.2e-05 Identity = 20/24 (83.33%), Postives = 22/24 (91.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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