
Sed0020172 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCTTGGCAAAGAAGTTCAGCAATATCTGACCCTTTCGCCCTTCCTCTCATTTCTTCCATATCAATCTTCTTCGTCTTCTTCACAGAGCTCAAGAGAGACAACAATGGCGTGGTTGACGCGATTCTTAACGGCGGTGGCCTTTTTAGCCATCGGAGTTGTCTTTTCGCCGGAAACCTTCGGATCCAACTCCAAATCCTTCAATGCGCCGAACCTCGCAGTGTATCTCAAACTGGCTCATCTCCTCTGCTACTCCACCGCCTGGGGCGCTTCTCTTTGGGTCACCTTCATCGGCGGCATCATCATGTTCAAGTAAATCACTCGTTTCCTGCTTCTCAGTTGAAATTTTGTTGTCTGCTCTGATTGAAACGCGCTTTTAGGTATCCCGGATTTTGGTTTTGTTTTTCTGTTCGGGCTGATTGAGTACGTTTATTACTGTTTTGAACCATTTCTTTGACTGAGTGGAGATTTGGTGGTTTGGATATTGAATATTTTGGGGTAAATTATAAATTTAGATAAAGTAAATCACTCGTTTCCTACTTCTCAATTGAAATTTTGGTATCTGCTCTGATTATTGTACATGCGGGGGATGTAACGCGATTTTAGGTCACTGGGAATTTGGTTTTTGTTTTTTGATCGGTTAGTTTTTCTTGCTGATTGAGTACTTTTATTGCTGTTTTTAACTATTTCTTATGCGTCAATGTAATTGTATAGATTATTTTGGGGTAAATTATAAATTTTTCTGTATGGTTCGAAGAAAGTCAAAGTTTAGTCCCGTAGCTTCGAAAACTAGGATTTAGTCACCTATGTTTTGACAAACCTTGGAATTTTGTCCTTATGTTTTTAAAAACTAGAATTTAGTTACCTCGAGGTTTCTGATGGGAGACTCACCGACATTAATTTGTAAATACTTCACGTGTCTTCATTCATTTTATGTCTTCCGGTGTCTGGCTTAGGGACGAATGTAGTTACCTTGAGTATAGTGAAGTGAAACTCTGATTTACCGGTTTCCAAAACAGAAAAACTAGAATTTAGGTCCCCAAGGAGTGACACAATGGTTGAAGACTTGGGTTTTGAGGATATGCTCCCCTCAAGGTCTTAGGCTCGAGAATCACCTGTGACATTACTCATTCGATGTCTCTGGTGCCCGACCTAAGGACGGGCGTGGTTACCCTTGTTTAAAAAAAAAAACTAAAATTTAGTCTATATGGTTTGACAATATCTAAAGTTTAGTCCTTGTCGTGAATTATATGTATGAAAATTAGCTATTCATGCTTAAATGATGTATTTTTTTTATATTTAATTAATCATTGACACATGAATAACTAAATTTCACGTACTCAATTCGCTAACGATTAGAAATTTTAAAGACTATTTTTTGGATTTTATCAAACCATTGAAACCAAATTCTAGTTTTTAAAATTATGGGGACTATATTCCAACTTTTTTCAAATCATAGAAACCAAGTTCTAATTTTTGAAACCATGGGGATTAAACTCTAACTTTCTTGAAACCATAAGGACCAAACGTTTAATTTACCCATTATTTTGTGTATACTGTATAGAGAATGGTGGTATCTTTGATGTGTTTCAGATATTGTTAGAGGAAATCTTCAATGATTCTTATGATTTTAAGATATTTAATGTGAGTTTAGATCAATTTTGAAAACCTAGCTTCAATTGGATAGACGGCATTCACTGTGATTGAAATGGCCAAATGGGTGTATATCAAGATTGAATTTCTTTGAAAATTTGAAGTCCTTATTTTATCAATATAAAGAGTTGCCGTTTTCATTAATTTCTACCTTTGACTGAAAAATCAATACCAACACTATATATTCAAGCGGCAATAAGGCCATGACTCAACTAGGATAAAGTAGGTTTATGATCAAGAGGACATAGGTTTCCTGAATGTTGTTGAACTATAAAAACCACTTGAGTTATTGATTTTGTTGGCTATAAAAACTACTACATTTTTTTGAGTTCAACAATTGGGGGTGGTGGGCGTGGGATTCGAACCTGTAAAAACTATATTTTTTTGAGTTCAACAATGGGGGGATTCGAACCTATGACCATGAGGTCATAGATATACACTTAATCGGCTCAACAATAGTTTTGATTGGCTACAAAAACCACTATATCTTTGAGTGAAGTGTAATTTTTCATATTGTTTAGTAATTTCTTTAATCCCTCTATCAATCCTAGGAATCTGCCGAGGCACCAATTTGGTAATCTTCAAAGCAAGATGTTCCCTGCCTACTTCTCAATGGTTGGGATTTGCTGTGCCACATCCGTTGCAGCTTTTGGTTATCTTCATCCATGGAAGTCTGCTGCAACTTCTGAGAGATACCAGCTTGGGTTTTTGATATCAGCTTTTGCATTCAATTTGTCCAACCTGTTTGTCTTCACACCCATGACCATTGAGGTAATTTCTCTAATTTCTGGAAAGTTTTTTCGCCATAACATATATGCGTTATCGCTATTATGCTGCTGTGAAAATGTCTGTTGTGATCTTTTTGTGTGTATACTTCTCACCCACTATATACAACGTGTATCACGTGGTTTCTTTTCATGTTTTAATGGAAAATTCATGCCTTGAAAATTATCTCATGGACTTCTGATAGGGAGTCCATTCTTATAAAAAAAAAAGAAGCAAAAAGTTGCCACTCTAGTTTTCACTTTTTACAGTACTTGGTGTAGCTAATGTAAGAGTTAAAACTCTCTTACCGATCATAAATGGAATATCCCTCTCATTTAAATACATAAGCTATTGATGTCAACATAAAGAATAACCAATGTTATGTTACCACTGTAATTAAATACAAAGTAACAGCTGTGATAGAAAGGAGAGTACTACGAAACAACTAAATACAACAAAGAACTAACTTAGTTTACTAATATAATCAATAGAAGTTTCAAGGTCCCAGGTTCGAGACTCACCTGTGACATTACTCTTTCGATGTCTCCTGGTGCCTGGCTTAGAGATGGGCGTGGTTACCCTTGTTTCAAAAAAAAAAAATATATAATCAATAGAAGTAGTAGTGATTCAGTCCTAAATTCAGAATAGGGCAGGGTCTAAAAGTCCTCATCTAGATTTGTAATCGCTATTCCTATAATTTCTCACATTTGAACCTTTTCTTGGAATTGATGATTCTTTTACTTTCTTTTCTTTCCTTTCCCTTTTTTTAACTGCTTAGAAAGATTCCTACTAGCTTATGTGAAAATTCAGTGTAATGACAAGAATACAACTACAATACTCTTCTTAATGCCTAAGAGAGTATACATGTATTTTTGACCAAGGGGTTGGAGGTTTAAATTTAAACTCCCGTTCTCAAATGTTAGTTTAACTAAAAACATAATATTCTCTTAAGAAAAAATTATTATGAAACCTAATAAAACTATAATGGGTTAGCCATGACCAATATGAACCTTATCATGAGTTCAATTCATGATTGCCACCTATCTTAGAATTAATATCCTATGAGTTACTTTGACAACCAACTATAAAAAGATGTAATGGTTGTCATGTGAACAATAGTCGAGATATTCGTAAGCTGACGCAAACACATCTATATTCATCATAATTTCATCTGCTTTGAGCTTCTTATATCTCATCAACATATATACAATAAGACAATTCAACTCCATCTCTACTGCCTTTTCCATTGATGTACATCAGCTGATGAAGCAAAGGCACAAAGTTGAGAGGGAAAATAACATTGGCGAGGAAGTTGGGTGGTCGAAGAACGTAGAAGTTGCAAAGGCGAATCCAAAACTTGCTGCAATGAACAAGAAATTCGGTATGGTTCACGGCTTATCGTCACTCGCTAATATCCTAGCATTTGGTAGTCTTGCTATGCACTCCTGGTACTTGGCAGGTAAAATTAATCTGTAACTCAAAAATTGTCCTTCCCCTTTTATGGGAGATGAAAGTGTATGAGCAATCACCCTAGTGCTCTTTCTTTGCTATACTGACATATCATCTTGTTGTAGAACAATACAGTTGCCTGTTTAGTTTGGATGGTTTGATAAAGAAACAGTGGAAAATAAGAGTGTTGTATAGATATCATTGTCTATGAGAAGTGATATCTATCTTCAAATCATGTTGTTTGTTTATTGTCCTGTGCTGCATAGTGCATAGTGATTTTTATCTGTTTAATGTTTGTCTGTTTCTGCAAGTTATTCATAAAATCATAGAATCATATTCAAATTCCCAAGCCTCCCTGTTAAGTTAACATATAATCTGCACTTTTTTCATATCTTAAAATTGTCCTTCTTTTAAC GGCTTGGCAAAGAAGTTCAGCAATATCTGACCCTTTCGCCCTTCCTCTCATTTCTTCCATATCAATCTTCTTCGTCTTCTTCACAGAGCTCAAGAGAGACAACAATGGCGTGGTTGACGCGATTCTTAACGGCGGTGGCCTTTTTAGCCATCGGAGTTGTCTTTTCGCCGGAAACCTTCGGATCCAACTCCAAATCCTTCAATGCGCCGAACCTCGCAGTGTATCTCAAACTGGCTCATCTCCTCTGCTACTCCACCGCCTGGGGCGCTTCTCTTTGGGTCACCTTCATCGGCGGCATCATCATGTTCAAGAATCTGCCGAGGCACCAATTTGGTAATCTTCAAAGCAAGATGTTCCCTGCCTACTTCTCAATGGTTGGGATTTGCTGTGCCACATCCGTTGCAGCTTTTGGTTATCTTCATCCATGGAAGTCTGCTGCAACTTCTGAGAGATACCAGCTTGGGTTTTTGATATCAGCTTTTGCATTCAATTTGTCCAACCTGTTTGTCTTCACACCCATGACCATTGAGCTGATGAAGCAAAGGCACAAAGTTGAGAGGGAAAATAACATTGGCGAGGAAGTTGGGTGGTCGAAGAACGTAGAAGTTGCAAAGGCGAATCCAAAACTTGCTGCAATGAACAAGAAATTCGGTATGGTTCACGGCTTATCGTCACTCGCTAATATCCTAGCATTTGGTAGTCTTGCTATGCACTCCTGGTACTTGGCAGGTAAAATTAATCTGTAACTCAAAAATTGTCCTTCCCCTTTTATGGGAGATGAAAGTGTATGAGCAATCACCCTAGTGCTCTTTCTTTGCTATACTGACATATCATCTTGTTGTAGAACAATACAGTTGCCTGTTTAGTTTGGATGGTTTGATAAAGAAACAGTGGAAAATAAGAGTGTTGTATAGATATCATTGTCTATGAGAAGTGATATCTATCTTCAAATCATGTTGTTTGTTTATTGTCCTGTGCTGCATAGTGCATAGTGATTTTTATCTGTTTAATGTTTGTCTGTTTCTGCAAGTTATTCATAAAATCATAGAATCATATTCAAATTCCCAAGCCTCCCTGTTAAGTTAACATATAATCTGCACTTTTTTCATATCTTAAAATTGTCCTTCTTTTAAC ATGGCGTGGTTGACGCGATTCTTAACGGCGGTGGCCTTTTTAGCCATCGGAGTTGTCTTTTCGCCGGAAACCTTCGGATCCAACTCCAAATCCTTCAATGCGCCGAACCTCGCAGTGTATCTCAAACTGGCTCATCTCCTCTGCTACTCCACCGCCTGGGGCGCTTCTCTTTGGGTCACCTTCATCGGCGGCATCATCATGTTCAAGAATCTGCCGAGGCACCAATTTGGTAATCTTCAAAGCAAGATGTTCCCTGCCTACTTCTCAATGGTTGGGATTTGCTGTGCCACATCCGTTGCAGCTTTTGGTTATCTTCATCCATGGAAGTCTGCTGCAACTTCTGAGAGATACCAGCTTGGGTTTTTGATATCAGCTTTTGCATTCAATTTGTCCAACCTGTTTGTCTTCACACCCATGACCATTGAGCTGATGAAGCAAAGGCACAAAGTTGAGAGGGAAAATAACATTGGCGAGGAAGTTGGGTGGTCGAAGAACGTAGAAGTTGCAAAGGCGAATCCAAAACTTGCTGCAATGAACAAGAAATTCGGTATGGTTCACGGCTTATCGTCACTCGCTAATATCCTAGCATTTGGTAGTCTTGCTATGCACTCCTGGTACTTGGCAGGTAAAATTAATCTGTAA MAWLTRFLTAVAFLAIGVVFSPETFGSNSKSFNAPNLAVYLKLAHLLCYSTAWGASLWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSMVGICCATSVAAFGYLHPWKSAATSERYQLGFLISAFAFNLSNLFVFTPMTIELMKQRHKVERENNIGEEVGWSKNVEVAKANPKLAAMNKKFGMVHGLSSLANILAFGSLAMHSWYLAGKINL Homology
BLAST of Sed0020172 vs. NCBI nr
Match: XP_022959796.1 (transmembrane protein 205 [Cucurbita moschata] >XP_023004653.1 transmembrane protein 205 [Cucurbita maxima] >XP_023004654.1 transmembrane protein 205 [Cucurbita maxima] >XP_023515109.1 transmembrane protein 205 [Cucurbita pepo subsp. pepo] >KAG6593230.1 Transmembrane protein 205, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 417.5 bits (1072), Expect = 6.7e-113 Identity = 204/213 (95.77%), Postives = 210/213 (98.59%), Query Frame = 0
BLAST of Sed0020172 vs. NCBI nr
Match: KAG7025584.1 (Transmembrane protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 410.6 bits (1054), Expect = 8.2e-111 Identity = 200/210 (95.24%), Postives = 207/210 (98.57%), Query Frame = 0
BLAST of Sed0020172 vs. NCBI nr
Match: XP_011659389.1 (transmembrane protein 205 [Cucumis sativus]) HSP 1 Score: 408.3 bits (1048), Expect = 4.1e-110 Identity = 200/213 (93.90%), Postives = 207/213 (97.18%), Query Frame = 0
BLAST of Sed0020172 vs. NCBI nr
Match: XP_038900060.1 (transmembrane protein 205 [Benincasa hispida]) HSP 1 Score: 407.9 bits (1047), Expect = 5.3e-110 Identity = 200/213 (93.90%), Postives = 207/213 (97.18%), Query Frame = 0
BLAST of Sed0020172 vs. NCBI nr
Match: XP_008451494.1 (PREDICTED: LOW QUALITY PROTEIN: transmembrane protein 205 [Cucumis melo]) HSP 1 Score: 407.1 bits (1045), Expect = 9.1e-110 Identity = 199/213 (93.43%), Postives = 207/213 (97.18%), Query Frame = 0
BLAST of Sed0020172 vs. ExPASy Swiss-Prot
Match: Q6GPW4 (Transmembrane protein 205 OS=Xenopus laevis OX=8355 GN=tmem205 PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.2e-24 Identity = 58/159 (36.48%), Postives = 92/159 (57.86%), Query Frame = 0
BLAST of Sed0020172 vs. ExPASy Swiss-Prot
Match: Q28GF8 (Transmembrane protein 205 OS=Xenopus tropicalis OX=8364 GN=tmem205 PE=2 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 3.3e-22 Identity = 55/159 (34.59%), Postives = 89/159 (55.97%), Query Frame = 0
BLAST of Sed0020172 vs. ExPASy Swiss-Prot
Match: Q5REM8 (Transmembrane protein 205 OS=Pongo abelii OX=9601 GN=TMEM205 PE=2 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 3.7e-21 Identity = 62/179 (34.64%), Postives = 88/179 (49.16%), Query Frame = 0
BLAST of Sed0020172 vs. ExPASy Swiss-Prot
Match: Q6UW68 (Transmembrane protein 205 OS=Homo sapiens OX=9606 GN=TMEM205 PE=1 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 4.8e-21 Identity = 62/179 (34.64%), Postives = 88/179 (49.16%), Query Frame = 0
BLAST of Sed0020172 vs. ExPASy Swiss-Prot
Match: Q91XE8 (Transmembrane protein 205 OS=Mus musculus OX=10090 GN=Tmem205 PE=1 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.2e-19 Identity = 55/159 (34.59%), Postives = 81/159 (50.94%), Query Frame = 0
BLAST of Sed0020172 vs. ExPASy TrEMBL
Match: A0A6J1KWX6 (transmembrane protein 205 OS=Cucurbita maxima OX=3661 GN=LOC111497883 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 3.3e-113 Identity = 204/213 (95.77%), Postives = 210/213 (98.59%), Query Frame = 0
BLAST of Sed0020172 vs. ExPASy TrEMBL
Match: A0A6J1H5V3 (transmembrane protein 205 OS=Cucurbita moschata OX=3662 GN=LOC111460756 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 3.3e-113 Identity = 204/213 (95.77%), Postives = 210/213 (98.59%), Query Frame = 0
BLAST of Sed0020172 vs. ExPASy TrEMBL
Match: A0A0A0K6C4 (DUF4149 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G407560 PE=4 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 2.0e-110 Identity = 200/213 (93.90%), Postives = 207/213 (97.18%), Query Frame = 0
BLAST of Sed0020172 vs. ExPASy TrEMBL
Match: A0A1S3BSQ1 (LOW QUALITY PROTEIN: transmembrane protein 205 OS=Cucumis melo OX=3656 GN=LOC103492767 PE=4 SV=1) HSP 1 Score: 407.1 bits (1045), Expect = 4.4e-110 Identity = 199/213 (93.43%), Postives = 207/213 (97.18%), Query Frame = 0
BLAST of Sed0020172 vs. ExPASy TrEMBL
Match: A0A6J1DHW6 (transmembrane protein 205 OS=Momordica charantia OX=3673 GN=LOC111020205 PE=4 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 5.4e-108 Identity = 198/213 (92.96%), Postives = 203/213 (95.31%), Query Frame = 0
BLAST of Sed0020172 vs. TAIR 10
Match: AT3G62580.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 349.7 bits (896), Expect = 1.6e-96 Identity = 163/213 (76.53%), Postives = 192/213 (90.14%), Query Frame = 0
BLAST of Sed0020172 vs. TAIR 10
Match: AT1G72100.1 (late embryogenesis abundant domain-containing protein / LEA domain-containing protein ) HSP 1 Score: 65.9 bits (159), Expect = 4.6e-11 Identity = 52/190 (27.37%), Postives = 86/190 (45.26%), Query Frame = 0
BLAST of Sed0020172 vs. TAIR 10
Match: AT1G22600.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 52.8 bits (125), Expect = 4.0e-07 Identity = 47/183 (25.68%), Postives = 77/183 (42.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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