Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGGACTGCGGAGGAGCCCCGCTCCTCGAGTTCAACGGGACGATGTACCGAGACTGGAGTTGGAGAGGAGGTACTTTGAGGAGACCAACCCGTCGGTCCAACTCAAATTGGACAAGCTTGAGGAGAAGTACAAAAACCTCCACCTCGAGATGGACGAGGATGCAGTCAGGGTCACGTTGGTTTATTACACGGAGGTGGCAACGATGGGGAAGAACAAGAGCAAGAGTTGCGTCAACAGAACACTGTTCGAGGACGTTGAAGACCTAGATTATTACAACAGCAGAGACTGAGGTAATATCCTATGGGAGCGAACACTGAAGGGCCTGAAGGTTGCCTTGAAGGATAAGGCCAAGGCTCATAAGAGGAAGGTCAGTGCGGGAGACGATAGGCAGATCAAGTATTCGCTACCCAAATTTCCACACGCCTTTCAGGTAACGTTTTGGAACTGTACATGTATAAAATTTGTAGTATTAATCGAGAACCAACCTGACATGTTATTTTCAGGTCTGGGCGTATGAGATATTGTCGCATGTTCCGGGGAGGGTTACCATCAGGGGTAGGGAATTGGCAGTGCCTCGGTTTCTCAGATGGTCCTACAGCAGCTCGCTGCAGCTTGTGGTGTTGCAGTATGACGTTTTTGAGTTAGCAATGGGTAAGGACATCTCATCACAACCACTGTTCATCGACCCCCTCTTTACACTGATGCCTCCTTCGAGCGTCTCTCACCACCACATCAGTTCAACACCTTTTGAACCTTAA
mRNA sequence
ATGACGGGACTGCGGAGGAGCCCCGCTCCTCGAGTTCAACGGGACGATGTACCGAGACTGGAGTTGGAGAGGAGGTACTTTGAGGAGACCAACCCGTCGGTCCAACTCAAATTGGACAAGCTTGAGGAGAAGTACAAAAACCTCCACCTCGAGATGGACGAGGATGCAGTCAGGGTCACGTTGGTTTATTACACGGAGGTGGCAACGATGGGGAAGAACAAGAGCAAGAGTTGCGTCAACAGAACACTGTTCGAGGACGGCCTGAAGGTTGCCTTGAAGGATAAGGCCAAGGCTCATAAGAGGAAGGTCAGTGCGGGAGACGATAGGCAGATCAAGTATTCGCTACCCAAATTTCCACACGCCTTTCAGGTCTGGGCGTATGAGATATTGTCGCATGTTCCGGGGAGGGTTACCATCAGGGGTAGGGAATTGGCAGTGCCTCGGTTTCTCAGATGGTCCTACAGCAGCTCGCTGCAGCTTGTGGTGTTGCAGTATGACGTTTTTGAGTTAGCAATGGGTAAGGACATCTCATCACAACCACTGTTCATCGACCCCCTCTTTACACTGATGCCTCCTTCGAGCGTCTCTCACCACCACATCAGTTCAACACCTTTTGAACCTTAA
Coding sequence (CDS)
ATGACGGGACTGCGGAGGAGCCCCGCTCCTCGAGTTCAACGGGACGATGTACCGAGACTGGAGTTGGAGAGGAGGTACTTTGAGGAGACCAACCCGTCGGTCCAACTCAAATTGGACAAGCTTGAGGAGAAGTACAAAAACCTCCACCTCGAGATGGACGAGGATGCAGTCAGGGTCACGTTGGTTTATTACACGGAGGTGGCAACGATGGGGAAGAACAAGAGCAAGAGTTGCGTCAACAGAACACTGTTCGAGGACGGCCTGAAGGTTGCCTTGAAGGATAAGGCCAAGGCTCATAAGAGGAAGGTCAGTGCGGGAGACGATAGGCAGATCAAGTATTCGCTACCCAAATTTCCACACGCCTTTCAGGTCTGGGCGTATGAGATATTGTCGCATGTTCCGGGGAGGGTTACCATCAGGGGTAGGGAATTGGCAGTGCCTCGGTTTCTCAGATGGTCCTACAGCAGCTCGCTGCAGCTTGTGGTGTTGCAGTATGACGTTTTTGAGTTAGCAATGGGTAAGGACATCTCATCACAACCACTGTTCATCGACCCCCTCTTTACACTGATGCCTCCTTCGAGCGTCTCTCACCACCACATCAGTTCAACACCTTTTGAACCTTAA
Protein sequence
MTGLRRSPAPRVQRDDVPRLELERRYFEETNPSVQLKLDKLEEKYKNLHLEMDEDAVRVTLVYYTEVATMGKNKSKSCVNRTLFEDGLKVALKDKAKAHKRKVSAGDDRQIKYSLPKFPHAFQVWAYEILSHVPGRVTIRGRELAVPRFLRWSYSSSLQLVVLQYDVFELAMGKDISSQPLFIDPLFTLMPPSSVSHHHISSTPFEP
Homology
BLAST of Lag0040963 vs. NCBI nr
Match:
XP_038888550.1 (uncharacterized protein LOC120078361 isoform X1 [Benincasa hispida])
HSP 1 Score: 139.4 bits (350), Expect = 3.4e-29
Identity = 84/190 (44.21%), Postives = 106/190 (55.79%), Query Frame = 0
Query: 1 MTGLRRSPAPRVQRDDVPRLELERRYFEETNPSVQLKLDKLEEKYKNLHLEMDEDAVRVT 60
+TGL RS RV R + EL +YF S L LEE+YK L E D+DAV++T
Sbjct: 97 ITGLWRS-LTRVGRSEESSHELFTKYFGSRLASDTFHLHLLEEEYKELVFENDDDAVKIT 156
Query: 61 LVYYTEVATMGKNKSKSCVNRTLFE----------------------DGLKVALKDKAKA 120
LVYYTEVA M KNK K+ V+RTLF+ D LK+ALKDK
Sbjct: 157 LVYYTEVAMMSKNKQKNVVDRTLFDDVEDIDYYNSLDWGTIIWQRTPDSLKIALKDKVGL 216
Query: 121 HKRKVSAGDDRQIKYSLPKFPHAFQVWAYEILSHVPGRVTIRGRELAVPRFLRWSYSSSL 169
+K K+ + +KYSL FP AFQVW Y+ILS + G V R +A+PR LRWS S S+
Sbjct: 217 YKEKMRGNKNYVVKYSLRGFPQAFQVWTYKILSLIAGNVATRKSNVAIPRILRWSCSHSV 276
BLAST of Lag0040963 vs. NCBI nr
Match:
KGN49944.1 (hypothetical protein Csa_000148 [Cucumis sativus])
HSP 1 Score: 135.6 bits (340), Expect = 5.0e-28
Identity = 83/190 (43.68%), Postives = 109/190 (57.37%), Query Frame = 0
Query: 1 MTGLRRSPAPRVQRDDVPRLELERRYFEETNPSVQLKLDKLEEKYKNLHLEMDEDAVRVT 60
+TGL SP V R + + L +YF V + EE+YKNL+ D DAV+VT
Sbjct: 98 VTGLWPSPTKPVPRVEATK-SLGTKYF-GNELVVDMNPLTFEERYKNLNFYDDLDAVKVT 157
Query: 61 LVYYTEVATMGKNKSKSCVNRTLFED----------------------GLKVALKDKAKA 120
LVYYTE+A MGK+++KS +N++L +D GL+ ALK+K
Sbjct: 158 LVYYTELAMMGKDRTKSIINKSLLDDVEDLKYYNSLDWGHILWEKTLRGLQNALKNKVDM 217
Query: 121 HKRKVSAGDDRQIKYSLPKFPHAFQVWAYEILSHVPGRVTIRGRELAVPRFLRWSYSSSL 169
+K+KV + +KYSLP FPHAFQVWAYEI+S + G+ R AVPR LRWS S SL
Sbjct: 218 YKKKVKLNKNYNVKYSLPGFPHAFQVWAYEIISSIAGKAVTRLNNEAVPRILRWSCSYSL 277
BLAST of Lag0040963 vs. NCBI nr
Match:
XP_031741885.1 (uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus])
HSP 1 Score: 135.6 bits (340), Expect = 5.0e-28
Identity = 83/190 (43.68%), Postives = 109/190 (57.37%), Query Frame = 0
Query: 1 MTGLRRSPAPRVQRDDVPRLELERRYFEETNPSVQLKLDKLEEKYKNLHLEMDEDAVRVT 60
+TGL SP V R + + L +YF V + EE+YKNL+ D DAV+VT
Sbjct: 181 VTGLWPSPTKPVPRVEATK-SLGTKYF-GNELVVDMNPLTFEERYKNLNFYDDLDAVKVT 240
Query: 61 LVYYTEVATMGKNKSKSCVNRTLFED----------------------GLKVALKDKAKA 120
LVYYTE+A MGK+++KS +N++L +D GL+ ALK+K
Sbjct: 241 LVYYTELAMMGKDRTKSIINKSLLDDVEDLKYYNSLDWGHILWEKTLRGLQNALKNKVDM 300
Query: 121 HKRKVSAGDDRQIKYSLPKFPHAFQVWAYEILSHVPGRVTIRGRELAVPRFLRWSYSSSL 169
+K+KV + +KYSLP FPHAFQVWAYEI+S + G+ R AVPR LRWS S SL
Sbjct: 301 YKKKVKLNKNYNVKYSLPGFPHAFQVWAYEIISSIAGKAVTRLNNEAVPRILRWSCSYSL 360
BLAST of Lag0040963 vs. NCBI nr
Match:
XP_011654656.1 (uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus])
HSP 1 Score: 135.6 bits (340), Expect = 5.0e-28
Identity = 83/190 (43.68%), Postives = 109/190 (57.37%), Query Frame = 0
Query: 1 MTGLRRSPAPRVQRDDVPRLELERRYFEETNPSVQLKLDKLEEKYKNLHLEMDEDAVRVT 60
+TGL SP V R + + L +YF V + EE+YKNL+ D DAV+VT
Sbjct: 181 VTGLWPSPTKPVPRVEATK-SLGTKYF-GNELVVDMNPLTFEERYKNLNFYDDLDAVKVT 240
Query: 61 LVYYTEVATMGKNKSKSCVNRTLFED----------------------GLKVALKDKAKA 120
LVYYTE+A MGK+++KS +N++L +D GL+ ALK+K
Sbjct: 241 LVYYTELAMMGKDRTKSIINKSLLDDVEDLKYYNSLDWGHILWEKTLRGLQNALKNKVDM 300
Query: 121 HKRKVSAGDDRQIKYSLPKFPHAFQVWAYEILSHVPGRVTIRGRELAVPRFLRWSYSSSL 169
+K+KV + +KYSLP FPHAFQVWAYEI+S + G+ R AVPR LRWS S SL
Sbjct: 301 YKKKVKLNKNYNVKYSLPGFPHAFQVWAYEIISSIAGKAVTRLNNEAVPRILRWSCSYSL 360
BLAST of Lag0040963 vs. NCBI nr
Match:
XP_008437500.1 (PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo])
HSP 1 Score: 134.4 bits (337), Expect = 1.1e-27
Identity = 84/191 (43.98%), Postives = 111/191 (58.12%), Query Frame = 0
Query: 1 MTGLRRSPAPRVQRDDVPRLELERRYFEETNPSVQLKLDKLEEKYKNLHLEMDEDAVRVT 60
+TGL SP V+R + + L +YF V + EE+YKNL+ D DAV+VT
Sbjct: 181 VTGLWPSPTKSVRRVEASK-SLGTKYF-GNELVVDMNPITFEERYKNLNFYDDLDAVKVT 240
Query: 61 LVYYTEVATMGKNKSKSCVNRTLFED----------------------GLKVALKDKAKA 120
LVYYTE+A MGK+++KS +N++L +D GL+ ALK+K
Sbjct: 241 LVYYTELAMMGKDRTKSIINKSLLDDVEDLKYYNSLDWGHILWERTLRGLQNALKNKVDM 300
Query: 121 HKRKVSAGDDRQIKYSLPKFPHAFQVWAYEILSHV-PGRVTIRGRELAVPRFLRWSYSSS 169
+K+KV + +KYSLP FPHAFQVWAYEI+S + GR R AVPRFLRWS S S
Sbjct: 301 YKKKVKLNKNYNVKYSLPGFPHAFQVWAYEIISSMAAGRAVTRLNNDAVPRFLRWSCSYS 360
BLAST of Lag0040963 vs. ExPASy TrEMBL
Match:
A0A0A0KM59 (DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=4 SV=1)
HSP 1 Score: 135.6 bits (340), Expect = 2.4e-28
Identity = 83/190 (43.68%), Postives = 109/190 (57.37%), Query Frame = 0
Query: 1 MTGLRRSPAPRVQRDDVPRLELERRYFEETNPSVQLKLDKLEEKYKNLHLEMDEDAVRVT 60
+TGL SP V R + + L +YF V + EE+YKNL+ D DAV+VT
Sbjct: 98 VTGLWPSPTKPVPRVEATK-SLGTKYF-GNELVVDMNPLTFEERYKNLNFYDDLDAVKVT 157
Query: 61 LVYYTEVATMGKNKSKSCVNRTLFED----------------------GLKVALKDKAKA 120
LVYYTE+A MGK+++KS +N++L +D GL+ ALK+K
Sbjct: 158 LVYYTELAMMGKDRTKSIINKSLLDDVEDLKYYNSLDWGHILWEKTLRGLQNALKNKVDM 217
Query: 121 HKRKVSAGDDRQIKYSLPKFPHAFQVWAYEILSHVPGRVTIRGRELAVPRFLRWSYSSSL 169
+K+KV + +KYSLP FPHAFQVWAYEI+S + G+ R AVPR LRWS S SL
Sbjct: 218 YKKKVKLNKNYNVKYSLPGFPHAFQVWAYEIISSIAGKAVTRLNNEAVPRILRWSCSYSL 277
BLAST of Lag0040963 vs. ExPASy TrEMBL
Match:
A0A1S3ATU8 (uncharacterized protein LOC103482899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 5.3e-28
Identity = 84/191 (43.98%), Postives = 111/191 (58.12%), Query Frame = 0
Query: 1 MTGLRRSPAPRVQRDDVPRLELERRYFEETNPSVQLKLDKLEEKYKNLHLEMDEDAVRVT 60
+TGL SP V+R + + L +YF V + EE+YKNL+ D DAV+VT
Sbjct: 181 VTGLWPSPTKSVRRVEASK-SLGTKYF-GNELVVDMNPITFEERYKNLNFYDDLDAVKVT 240
Query: 61 LVYYTEVATMGKNKSKSCVNRTLFED----------------------GLKVALKDKAKA 120
LVYYTE+A MGK+++KS +N++L +D GL+ ALK+K
Sbjct: 241 LVYYTELAMMGKDRTKSIINKSLLDDVEDLKYYNSLDWGHILWERTLRGLQNALKNKVDM 300
Query: 121 HKRKVSAGDDRQIKYSLPKFPHAFQVWAYEILSHV-PGRVTIRGRELAVPRFLRWSYSSS 169
+K+KV + +KYSLP FPHAFQVWAYEI+S + GR R AVPRFLRWS S S
Sbjct: 301 YKKKVKLNKNYNVKYSLPGFPHAFQVWAYEIISSMAAGRAVTRLNNDAVPRFLRWSCSYS 360
BLAST of Lag0040963 vs. ExPASy TrEMBL
Match:
A0A1S3AUB0 (uncharacterized protein LOC103482899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 5.3e-28
Identity = 84/191 (43.98%), Postives = 111/191 (58.12%), Query Frame = 0
Query: 1 MTGLRRSPAPRVQRDDVPRLELERRYFEETNPSVQLKLDKLEEKYKNLHLEMDEDAVRVT 60
+TGL SP V+R + + L +YF V + EE+YKNL+ D DAV+VT
Sbjct: 179 VTGLWPSPTKSVRRVEASK-SLGTKYF-GNELVVDMNPITFEERYKNLNFYDDLDAVKVT 238
Query: 61 LVYYTEVATMGKNKSKSCVNRTLFED----------------------GLKVALKDKAKA 120
LVYYTE+A MGK+++KS +N++L +D GL+ ALK+K
Sbjct: 239 LVYYTELAMMGKDRTKSIINKSLLDDVEDLKYYNSLDWGHILWERTLRGLQNALKNKVDM 298
Query: 121 HKRKVSAGDDRQIKYSLPKFPHAFQVWAYEILSHV-PGRVTIRGRELAVPRFLRWSYSSS 169
+K+KV + +KYSLP FPHAFQVWAYEI+S + GR R AVPRFLRWS S S
Sbjct: 299 YKKKVKLNKNYNVKYSLPGFPHAFQVWAYEIISSMAAGRAVTRLNNDAVPRFLRWSCSYS 358
BLAST of Lag0040963 vs. ExPASy TrEMBL
Match:
A0A5A7TGU0 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001140 PE=4 SV=1)
HSP 1 Score: 133.7 bits (335), Expect = 9.1e-28
Identity = 84/191 (43.98%), Postives = 111/191 (58.12%), Query Frame = 0
Query: 1 MTGLRRSPAPRVQRDDVPRLELERRYFEETNPSVQLKLDKLEEKYKNLHLEMDEDAVRVT 60
+TGL SP V+R + + L +YF V + EE+YKNL+ D DAV+VT
Sbjct: 104 VTGLWPSPTKSVRRVEASK-SLGTKYF-GNELVVDMNPITFEERYKNLNFCDDLDAVKVT 163
Query: 61 LVYYTEVATMGKNKSKSCVNRTLFED----------------------GLKVALKDKAKA 120
LVYYTE+A MGK+++KS +N++L +D GL+ ALK+K
Sbjct: 164 LVYYTELAMMGKDRTKSIINKSLLDDVEDLKYYNSLDWGHILWERTLRGLQNALKNKVDM 223
Query: 121 HKRKVSAGDDRQIKYSLPKFPHAFQVWAYEILSHV-PGRVTIRGRELAVPRFLRWSYSSS 169
+K+KV + +KYSLP FPHAFQVWAYEI+S + GR R AVPRFLRWS S S
Sbjct: 224 YKKKVKLNKNYNVKYSLPGFPHAFQVWAYEIISSMAAGRAVTRLNNDAVPRFLRWSCSYS 283
BLAST of Lag0040963 vs. ExPASy TrEMBL
Match:
A0A6J1DSS5 (uncharacterized protein LOC111023969 OS=Momordica charantia OX=3673 GN=LOC111023969 PE=4 SV=1)
HSP 1 Score: 120.9 bits (302), Expect = 6.1e-24
Identity = 77/190 (40.53%), Postives = 109/190 (57.37%), Query Frame = 0
Query: 1 MTGLRRSPAPRVQRDDVPRLELERRYFEETNPSVQLKLDKLEEKYKNLHLEMDEDAVRVT 60
MTGL RS + RV + V + L R YF++ V L+L++ E++YK + D+DAV+V+
Sbjct: 98 MTGLWRS-SGRVLQKKVSKNRLRREYFKDV---VDLRLEEFEQEYKKIVFANDDDAVKVS 157
Query: 61 LVYYTEVATMGKNKSKSCVNRTLF---ED-------------------GLKVALKDKAKA 120
L+YYTE+ MGKNK KS V++ L+ ED GL+ A+KDK
Sbjct: 158 LIYYTEIVMMGKNKGKSNVDKDLYGQVEDLDYFNNMDWGTTIWQRTLKGLQSAMKDKVVN 217
Query: 121 HKRKVSAGDDRQIKYSLPKFPHAFQVWAYEILSHVPGRVTIRGRELAVPRFLRWSYSSSL 169
+K KV+ Q++YSL FP AFQVWAYEI+ + R + A+PR R+S S S+
Sbjct: 218 YKNKVTTNKKFQVRYSLTGFPVAFQVWAYEIIPSLMRNGVNRLSDTAMPRIFRYSCSQSI 277
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038888550.1 | 3.4e-29 | 44.21 | uncharacterized protein LOC120078361 isoform X1 [Benincasa hispida] | [more] |
| KGN49944.1 | 5.0e-28 | 43.68 | hypothetical protein Csa_000148 [Cucumis sativus] | [more] |
| XP_031741885.1 | 5.0e-28 | 43.68 | uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus] | [more] |
| XP_011654656.1 | 5.0e-28 | 43.68 | uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus] | [more] |
| XP_008437500.1 | 1.1e-27 | 43.98 | PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KM59 | 2.4e-28 | 43.68 | DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=... | [more] |
| A0A1S3ATU8 | 5.3e-28 | 43.98 | uncharacterized protein LOC103482899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
| A0A1S3AUB0 | 5.3e-28 | 43.98 | uncharacterized protein LOC103482899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
| A0A5A7TGU0 | 9.1e-28 | 43.98 | Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G... | [more] |
| A0A6J1DSS5 | 6.1e-24 | 40.53 | uncharacterized protein LOC111023969 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
