Sed0014077 (gene) Chayote v1

Overview


Name	Sed0014077
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pentatricopeptide repeat-containing protein
Location	LG09: 34447284 .. 34449112 (+)
RNA-Seq Expression	Sed0014077
Synteny	Sed0014077

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCATTTATCGTCGTTGCCAAATCCATTTCCAACCCATTAAGCTTTCAGTTCTTTGAATCCAAATACATGGTTTCCAAATCAAAGCTTTCGTCTTTGTTCATCATTCAATCCCCACGAATTGCATCTTCAAATCCCAACAAATATTCGCAGCCAAAATCGACAAAATCGCCTGCAATTTCGTCTCAAGAACAGCTTCGGAAGTTCCTTCAGAATTGCAAAACAGGTAATAATGTTACCAAATCTGAATCATTTCAATTCTTTAATCTTATGATTCGAGCAAATCCCACCATTCCCATTTCTGCATTCAATGTTTTACTTACTGGGCTTGCTAAACTTAAGTATTGTTCTGAAGTTTTTCAGCTCTATCATAGAATGGCCTCATCTGGGCTTTTGCCTGATTTTTTCACGCTTAATATCTTGCTTAATTGCCTTTCTAATGTCAATCGGGTGACCGAAGGTCTCGCGGTCGCGGCCGTGATGATAAGGAGAGGTTATAATCCTAATGTGGTCACATATACGTCTCTGATTAAGGGATTGTGTAGGGAGAATAGGACTAGTGAAGCCACACGCTTGTTTATGAGAATGCAAAAGTTGGGTTGCAACCCAAGTGTGGTCACTTTTAATGTGATTATGGATATGCTTTGCAAAAATGGAAAAGTTCTCGAGGCAAAGGAATTGTTGAAGGTCATGATTCAGAGCGGTAATGTTCCTAGTTTGTTTACTTACAATTCATTGATGTATGGGTTTTGTTTGGTTGGCGACCTAAAGAGTGCGATGGAGTTGTTTGGTAGTATGAAAAGTAATGGGTGTGAACCAGATGCGACCACTTATGGGACTTTATTAAAGGGGCATTTTCAAACTGGCAATACTAAGCTTGCTCTTAAGTTGCATGAGGAATTGCTCAATGGAACGGGTCAATATGCAGATAGTTGTAAGGTGAATATTATTTGTTATAATACCATTATAGATGGACTTTGTAAAAATGGACGGAAAACAAGGCGATGGAAATGTTTGAGGAAATGAAAGCTCAGGGAGTGCTTCCTGATGTGATTTCTTATAACTCTTTGATTCATGGATTTTGTAATGGTGGAAAGTGGGAGGAGGCTAAACTTCTATTCAATGAGATGGTGGATCAAGGTGTACGTCTAAATGTGGCTACTTTTAATGTGATTATGGATATGCATTGTAAGAAAGGAAAGGTTATCGAGGCTAAGAAATTGTGGGAGGTCATGATTCAAAGAGGTAATGTTCCTGATTTATTTTCTTACAATATATTGATGGACGGGTTCTGTTTGGTTGGTGACTTAAAGAGTGCGAAAAAGTTGTTTGTTAGTATGACAAGTAAGGGTTGTGAACCAAATGTGATAAGCTATGGTGTGCTAATCAATGGGTATTGCAAAAATTTGAAGGTGGAAGAGGCAATGAACCTTTACAACGAAATGCTTCAAGTTGGAGTTAGGCCAAATGTGATAACATATAATGCCTTGTTGACGGGTCTTTTTCTTGCAGGCAAGGTTGATGATGCGAGAAAAATATTTTGTGTCATTCAAGATAATGGTGTTGCATTGAGTTCATGTACTGTTTGTATTGTTCTGGATGGGCTTTGTAAGAATGATTATTTGTTAGAAGCATTAAAACTTTTTAATGAGCTCTCATATAAGTCGAACATTGATATTCTTAATTGTGTTATCAATGGTCTATGTAAAGCAGGAAAACTTGAAACTGCTTGGGAGGTTTTCAACAAATTGTCTCATAATGGGTTTCTACCAAATGTCGTGACTTATAGCACTATCATTCAGGGTGTTGTAGAAACGGACAAATAG

mRNA sequence

ATGGAAGCATTTATCGTCGTTGCCAAATCCATTTCCAACCCATTAAGCTTTCAGTTCTTTGAATCCAAATACATGGTTTCCAAATCAAAGCTTTCGTCTTTGTTCATCATTCAATCCCCACGAATTGCATCTTCAAATCCCAACAAATATTCGCAGCCAAAATCGACAAAATCGCCTGCAATTTCGTCTCAAGAACAGCTTCGGAAGTTCCTTCAGAATTGCAAAACAGGTAATAATGTTACCAAATCTGAATCATTTCAATTCTTTAATCTTATGATTCGAGCAAATCCCACCATTCCCATTTCTGCATTCAATGTTTTACTTACTGGGCTTGCTAAACTTAAGTATTGTTCTGAAGTTTTTCAGCTCTATCATAGAATGGCCTCATCTGGGCTTTTGCCTGATTTTTTCACGCTTAATATCTTGCTTAATTGCCTTTCTAATGTCAATCGGGTGACCGAAGGTCTCGCGGTCGCGGCCGTGATGATAAGGAGAGGTTATAATCCTAATGTGGTCACATATACGTCTCTGATTAAGGGATTGTGTAGGGAGAATAGGACTAGTGAAGCCACACGCTTGTTTATGAGAATGCAAAAGTTGGGTTGCAACCCAAGTGTGGTCACTTTTAATGTGATTATGGATATGCTTTGCAAAAATGGAAAAGTTCTCGAGGCAAAGGAATTGTTGAAGGTCATGATTCAGAGCGGTAATGTTCCTAGTTTGTTTACTTACAATTCATTGATGTATGGGTTTTGTTTGGTTGGCGACCTAAAGAGTGCGATGGAGTTGTTTGGTAGTATGAAAAGTAATGGGTGTGAACCAGATGCGACCACTTATGGGACTTTATTAAAGGGGCATTTTCAAACTGGCAATACTAAGCTTGCTCTTAAGTTGCATGAGGAATTGCTCAATGGAACGGGTCAATATGCAGATAGTTGTAAGGCGATGGAAATGTTTGAGGAAATGAAAGCTCAGGGAGTGCTTCCTGATGTGATTTCTTATAACTCTTTGATTCATGGATTTTGTAATGGTGGAAAGTGGGAGGAGGCTAAACTTCTATTCAATGAGATGGTGGATCAAGGTGTACGTCTAAATGTGGCTACTTTTAATGTGATTATGGATATGCATTGTAAGAAAGGAAAGGTTATCGAGGCTAAGAAATTGTGGGAGGTCATGATTCAAAGAGGTAATGTTCCTGATTTATTTTCTTACAATATATTGATGGACGGGTTCTGTTTGGTTGGTGACTTAAAGAGTGCGAAAAAGTTGTTTGTTAGTATGACAAGTAAGGGTTGTGAACCAAATGTGATAAGCTATGGTGTGCTAATCAATGGGTATTGCAAAAATTTGAAGGTGGAAGAGGCAATGAACCTTTACAACGAAATGCTTCAAGTTGGAGTTAGGCCAAATGTGATAACATATAATGCCTTGTTGACGGGTCTTTTTCTTGCAGGCAAGGTTGATGATGCGAGAAAAATATTTTGTGTCATTCAAGATAATGGTGTTGCATTGAGTTCATGTACTGTTTGTATTGTTCTGGATGGGCTTTGTAAGAATGATTATTTGTTAGAAGCATTAAAACTTTTTAATGAGCTCTCATATAAGTCGAACATTGATATTCTTAATTGTGTTATCAATGGTCTATGTAAAGCAGGAAAACTTGAAACTGCTTGGGAGGTTTTCAACAAATTGTCTCATAATGGGTTTCTACCAAATGTCGTGACTTATAGCACTATCATTCAGGGTGTTGTAGAAACGGACAAATAG

Coding sequence (CDS)

ATGGAAGCATTTATCGTCGTTGCCAAATCCATTTCCAACCCATTAAGCTTTCAGTTCTTTGAATCCAAATACATGGTTTCCAAATCAAAGCTTTCGTCTTTGTTCATCATTCAATCCCCACGAATTGCATCTTCAAATCCCAACAAATATTCGCAGCCAAAATCGACAAAATCGCCTGCAATTTCGTCTCAAGAACAGCTTCGGAAGTTCCTTCAGAATTGCAAAACAGGTAATAATGTTACCAAATCTGAATCATTTCAATTCTTTAATCTTATGATTCGAGCAAATCCCACCATTCCCATTTCTGCATTCAATGTTTTACTTACTGGGCTTGCTAAACTTAAGTATTGTTCTGAAGTTTTTCAGCTCTATCATAGAATGGCCTCATCTGGGCTTTTGCCTGATTTTTTCACGCTTAATATCTTGCTTAATTGCCTTTCTAATGTCAATCGGGTGACCGAAGGTCTCGCGGTCGCGGCCGTGATGATAAGGAGAGGTTATAATCCTAATGTGGTCACATATACGTCTCTGATTAAGGGATTGTGTAGGGAGAATAGGACTAGTGAAGCCACACGCTTGTTTATGAGAATGCAAAAGTTGGGTTGCAACCCAAGTGTGGTCACTTTTAATGTGATTATGGATATGCTTTGCAAAAATGGAAAAGTTCTCGAGGCAAAGGAATTGTTGAAGGTCATGATTCAGAGCGGTAATGTTCCTAGTTTGTTTACTTACAATTCATTGATGTATGGGTTTTGTTTGGTTGGCGACCTAAAGAGTGCGATGGAGTTGTTTGGTAGTATGAAAAGTAATGGGTGTGAACCAGATGCGACCACTTATGGGACTTTATTAAAGGGGCATTTTCAAACTGGCAATACTAAGCTTGCTCTTAAGTTGCATGAGGAATTGCTCAATGGAACGGGTCAATATGCAGATAGTTGTAAGGCGATGGAAATGTTTGAGGAAATGAAAGCTCAGGGAGTGCTTCCTGATGTGATTTCTTATAACTCTTTGATTCATGGATTTTGTAATGGTGGAAAGTGGGAGGAGGCTAAACTTCTATTCAATGAGATGGTGGATCAAGGTGTACGTCTAAATGTGGCTACTTTTAATGTGATTATGGATATGCATTGTAAGAAAGGAAAGGTTATCGAGGCTAAGAAATTGTGGGAGGTCATGATTCAAAGAGGTAATGTTCCTGATTTATTTTCTTACAATATATTGATGGACGGGTTCTGTTTGGTTGGTGACTTAAAGAGTGCGAAAAAGTTGTTTGTTAGTATGACAAGTAAGGGTTGTGAACCAAATGTGATAAGCTATGGTGTGCTAATCAATGGGTATTGCAAAAATTTGAAGGTGGAAGAGGCAATGAACCTTTACAACGAAATGCTTCAAGTTGGAGTTAGGCCAAATGTGATAACATATAATGCCTTGTTGACGGGTCTTTTTCTTGCAGGCAAGGTTGATGATGCGAGAAAAATATTTTGTGTCATTCAAGATAATGGTGTTGCATTGAGTTCATGTACTGTTTGTATTGTTCTGGATGGGCTTTGTAAGAATGATTATTTGTTAGAAGCATTAAAACTTTTTAATGAGCTCTCATATAAGTCGAACATTGATATTCTTAATTGTGTTATCAATGGTCTATGTAAAGCAGGAAAACTTGAAACTGCTTGGGAGGTTTTCAACAAATTGTCTCATAATGGGTTTCTACCAAATGTCGTGACTTATAGCACTATCATTCAGGGTGTTGTAGAAACGGACAAATAG

Protein sequence

MEAFIVVAKSISNPLSFQFFESKYMVSKSKLSSLFIIQSPRIASSNPNKYSQPKSTKSPAISSQEQLRKFLQNCKTGNNVTKSESFQFFNLMIRANPTIPISAFNVLLTGLAKLKYCSEVFQLYHRMASSGLLPDFFTLNILLNCLSNVNRVTEGLAVAAVMIRRGYNPNVVTYTSLIKGLCRENRTSEATRLFMRMQKLGCNPSVVTFNVIMDMLCKNGKVLEAKELLKVMIQSGNVPSLFTYNSLMYGFCLVGDLKSAMELFGSMKSNGCEPDATTYGTLLKGHFQTGNTKLALKLHEELLNGTGQYADSCKAMEMFEEMKAQGVLPDVISYNSLIHGFCNGGKWEEAKLLFNEMVDQGVRLNVATFNVIMDMHCKKGKVIEAKKLWEVMIQRGNVPDLFSYNILMDGFCLVGDLKSAKKLFVSMTSKGCEPNVISYGVLINGYCKNLKVEEAMNLYNEMLQVGVRPNVITYNALLTGLFLAGKVDDARKIFCVIQDNGVALSSCTVCIVLDGLCKNDYLLEALKLFNELSYKSNIDILNCVINGLCKAGKLETAWEVFNKLSHNGFLPNVVTYSTIIQGVVETDK

Homology

[Close]

BLAST of Sed0014077 vs. NCBI nr
Match: XP_022992036.1 (pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita maxima])

HSP 1 Score: 634.8 bits (1636), Expect = 7.4e-178
Identity = 352/620 (56.77%), Postives = 418/620 (67.42%), Query Frame = 0


Query: 6   VVAKSISNPLSFQFFESKYMVSKSKLSSLFI-----------------IQSPRIASSNPN 65
           +V+K++++ +S     +    SK KLSSLF                   +SP + S  PN
Sbjct: 1   MVSKTVASAISSSLLPAP---SKGKLSSLFTHPTIIASSKPQNPSPISAESPPVISKPPN 60

Query: 66  KYSQPK---STKSPAISSQEQLRKFLQNCKTGNNVTKSESFQFFNLMIRANPTIPISAFN 125
               P+      +  IS  E+LR FLQNCKTG N T SE+ QFF+LM+ ANPT  +S+FN
Sbjct: 61  SNVSPEVSLEKSTTEISFHERLRTFLQNCKTG-NFTVSEALQFFDLMMLANPTPAMSSFN 120

Query: 126 VLLTGLAKLKYCSEVFQLYHRMASSGLLPDFFTLNILLNCLSNVNRVTEGLAVAAVMIRR 185
           +LL GLAK K+ SEV +LY+RM+ +GLLP++ TLNILLNCL NVNR++EGLA  A +IRR
Sbjct: 121 LLLGGLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRR 180

Query: 186 GYNPNVVTYTSLIKGLCRENRTSEATRLFMRMQKLGCNPSVVTFNVIMDMLCKNGKVLEA 245
           GY PN+VTYTSLIKGLC E+R SEATRLFMRMQKLGC P+V+                  
Sbjct: 181 GYVPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVI------------------ 240

Query: 246 KELLKVMIQSGNVPSLFTYNSLMYGFCLVGDLKSAMELFGSMKSNGCEPDATTYGTLLKG 305
                                                               TYGTL+KG
Sbjct: 241 ----------------------------------------------------TYGTLIKG 300

Query: 306 HFQTGNTKLALKLHEELLNGTGQYADSC---------------------KAMEMFEEMKA 365
             QTGNT +ALKLHEE+LNGTG+Y  SC                     KA E+FEEMKA
Sbjct: 301 LCQTGNTNIALKLHEEMLNGTGRYGISCKPNVICYSTIIDGLCKDGREDKARELFEEMKA 360

Query: 366 QGVLPDVISYNSLIHGFCNGGKWEEAKLLFNEMVDQGVRLNVATFNVIMDMHCKKGKVIE 425
           + +LPDVISY+SLIHGFCNGGKWEEAK LFNEMVD G++ N  TFNV+MD+ CK GKVIE
Sbjct: 361 RRMLPDVISYSSLIHGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIE 420

Query: 426 AKKLWEVMIQRGNVPDLFSYNILMDGFCLVGDLKSAKKLFVSMTSKGCEPNVISYGVLIN 485
           A KL EVMIQRGNVPDLF YN LMDGFCLV DL+SA++LF+SM SKGCEPNVISY VLIN
Sbjct: 421 ANKLLEVMIQRGNVPDLFIYNTLMDGFCLVSDLESARELFLSMPSKGCEPNVISYNVLIN 480

Query: 486 GYCKNLKVEEAMNLYNEMLQVGVRPNVITYNALLTGLFLAGKVDDARKIFCVIQDNGVAL 545
           GYCKN KVEEAM +YNEMLQVGV+P+VITYNALLTGLF AGKVDDA+KIF VIQ +G+  
Sbjct: 481 GYCKNWKVEEAMKIYNEMLQVGVKPSVITYNALLTGLFQAGKVDDAKKIFGVIQAHGLVP 540

Query: 546 SSCTVCIVLDGLCKNDYLLEALKLFNELSY--KSNIDILNCVINGLCKAGKLETAWEVFN 583
           SS T+ I +DGLCKND LLEA+++FNELSY  K +IDI NC+I+GLCKAGKLETAWE F+
Sbjct: 541 SSSTLSIFVDGLCKNDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFD 546

[Close]

BLAST of Sed0014077 vs. NCBI nr
Match: KAG7014482.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 632.9 bits (1631), Expect = 2.8e-177
Identity = 353/621 (56.84%), Postives = 422/621 (67.95%), Query Frame = 0


Query: 6   VVAKSISNPLSFQFFESKYMVSKSKLSSLFIIQSPRIASSNPNKYS------------QP 65
           +V+K++++ +S     +    SK KLSSLF  + P IASSNP   S             P
Sbjct: 1   MVSKTVASAISSSLSPAP---SKGKLSSLF-TRPPIIASSNPQNPSPIPAESPPIISKPP 60

Query: 66  KSTKSPAISSQ---------EQLRKFLQNCKTGNNVTKSESFQFFNLMIRANPTIPISAF 125
            S  SP +S +         E+LR FLQNCKTG N T SE+FQFF+LM+ ANPT  +S+F
Sbjct: 61  NSNVSPEVSLEKSTTEIPFHERLRTFLQNCKTG-NFTVSEAFQFFDLMMLANPTPAMSSF 120

Query: 126 NVLLTGLAKLKYCSEVFQLYHRMASSGLLPDFFTLNILLNCLSNVNRVTEGLAVAAVMIR 185
           N+LL GLAK K+ SEV +LY+RM+ +GLLP++ TLNILLNCL NVNR++EGLA  A +IR
Sbjct: 121 NLLLGGLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIR 180

Query: 186 RGYNPNVVTYTSLIKGLCRENRTSEATRLFMRMQKLGCNPSVVTFNVIMDMLCKNGKVLE 245
           RG+ PN+VTYTSLIKGLC E+R SEATRLFMRMQKLGC P+V+                 
Sbjct: 181 RGFIPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVI----------------- 240

Query: 246 AKELLKVMIQSGNVPSLFTYNSLMYGFCLVGDLKSAMELFGSMKSNGCEPDATTYGTLLK 305
                                                                TYGTL+K
Sbjct: 241 -----------------------------------------------------TYGTLIK 300

Query: 306 GHFQTGNTKLALKLHEELLNGTGQYADSC---------------------KAMEMFEEMK 365
           G  QTGNT +ALKLHEE+LNGTG+Y  SC                     KA E+FEEMK
Sbjct: 301 GLCQTGNTNIALKLHEEMLNGTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMK 360

Query: 366 AQGVLPDVISYNSLIHGFCNGGKWEEAKLLFNEMVDQGVRLNVATFNVIMDMHCKKGKVI 425
           A+ +LPDVISY+SLIHGFCNGGKWEEAK LFNEMVD G++ N  TFNV+MD+ CK GKVI
Sbjct: 361 ARRMLPDVISYSSLIHGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVI 420

Query: 426 EAKKLWEVMIQRGNVPDLFSYNILMDGFCLVGDLKSAKKLFVSMTSKGCEPNVISYGVLI 485
           EA +L EVMIQRGNVPDLF+YN LMDGFCLV DL SA++LF+SM SKGCEPNVISY VLI
Sbjct: 421 EANELLEVMIQRGNVPDLFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLI 480

Query: 486 NGYCKNLKVEEAMNLYNEMLQVGVRPNVITYNALLTGLFLAGKVDDARKIFCVIQDNGVA 545
           NGYCKN KVEEAM +YNEMLQVG++P+VITYNALLTGLF AGKV+DA+KIF VIQ +G+ 
Sbjct: 481 NGYCKNWKVEEAMKIYNEMLQVGIKPSVITYNALLTGLFQAGKVNDAKKIFGVIQAHGLV 540

Query: 546 LSSCTVCIVLDGLCKNDYLLEALKLFNELSY--KSNIDILNCVINGLCKAGKLETAWEVF 583
            SS T+ I +DGLCKND LLEA+++FNELSY  K +IDI NC+I+GLCKAGKLETAWE F
Sbjct: 541 PSSSTLSIFVDGLCKNDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFF 546

[Close]

BLAST of Sed0014077 vs. NCBI nr
Match: XP_023548637.1 (pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 632.9 bits (1631), Expect = 2.8e-177
Identity = 352/621 (56.68%), Postives = 421/621 (67.79%), Query Frame = 0


Query: 6   VVAKSISNPLSFQFFESKYMVSKSKLSSLFIIQSPRIASSNPNKYS------------QP 65
           +V+K++++ +S     +    SK KLSSL + +  RIASSNP   S             P
Sbjct: 1   MVSKTVASAISSSLSPAP---SKGKLSSL-VTRPLRIASSNPQNLSPIPAESPPIISKPP 60

Query: 66  KSTKSPAISSQ---------EQLRKFLQNCKTGNNVTKSESFQFFNLMIRANPTIPISAF 125
            S  SP +S +         E+LR FLQNCKTG N T SE+FQFF+LM+ ANPT  +S+F
Sbjct: 61  NSNVSPEVSLEKSTTEISFHERLRTFLQNCKTG-NFTASEAFQFFDLMMLANPTPAMSSF 120

Query: 126 NVLLTGLAKLKYCSEVFQLYHRMASSGLLPDFFTLNILLNCLSNVNRVTEGLAVAAVMIR 185
           N+LL GLAK K+ SEV +LY+RM+ +GLLP++ TLNILLNCL NVNR++EGLA  A +IR
Sbjct: 121 NLLLGGLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIR 180

Query: 186 RGYNPNVVTYTSLIKGLCRENRTSEATRLFMRMQKLGCNPSVVTFNVIMDMLCKNGKVLE 245
           RG+ PN+VTYTSLIKGLC E+R SEATRLFMRMQKLGC P+V+                 
Sbjct: 181 RGFIPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVI----------------- 240

Query: 246 AKELLKVMIQSGNVPSLFTYNSLMYGFCLVGDLKSAMELFGSMKSNGCEPDATTYGTLLK 305
                                                                TYGTL+K
Sbjct: 241 -----------------------------------------------------TYGTLIK 300

Query: 306 GHFQTGNTKLALKLHEELLNGTGQYADSC---------------------KAMEMFEEMK 365
           G  QTGNT +ALKLHEE+LNGTG+Y  SC                     KA E+FEEMK
Sbjct: 301 GLCQTGNTNIALKLHEEMLNGTGRYGISCKPNVICYSTIIDGLCKDGREDKARELFEEMK 360

Query: 366 AQGVLPDVISYNSLIHGFCNGGKWEEAKLLFNEMVDQGVRLNVATFNVIMDMHCKKGKVI 425
           A+ +LPDVISY+SLIHGFCNGGKWEEAK LFNEMVD G++ N  TFNV+MD+ CK GKVI
Sbjct: 361 ARRMLPDVISYSSLIHGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVI 420

Query: 426 EAKKLWEVMIQRGNVPDLFSYNILMDGFCLVGDLKSAKKLFVSMTSKGCEPNVISYGVLI 485
           EA +L EVMIQRGN PDLF+YN LMDGFCLV DL SA++LF+SM SKGCEPNVISY VLI
Sbjct: 421 EANELLEVMIQRGNAPDLFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLI 480

Query: 486 NGYCKNLKVEEAMNLYNEMLQVGVRPNVITYNALLTGLFLAGKVDDARKIFCVIQDNGVA 545
           NGYCKN KVEEAM +YNEMLQVG++P+VITYNALLTGLF AGKVDDA+KIF VIQ +G+ 
Sbjct: 481 NGYCKNWKVEEAMKIYNEMLQVGIKPSVITYNALLTGLFQAGKVDDAKKIFGVIQAHGLV 540

Query: 546 LSSCTVCIVLDGLCKNDYLLEALKLFNELSY--KSNIDILNCVINGLCKAGKLETAWEVF 583
            SS T+ I +DGLCKND LLEA+++FNELSY  K +IDI NC+I+GLCKAGKLETAWE F
Sbjct: 541 PSSSTLSIFVDGLCKNDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFF 546

[Close]

BLAST of Sed0014077 vs. NCBI nr
Match: KAG6575949.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 632.9 bits (1631), Expect = 2.8e-177
Identity = 353/621 (56.84%), Postives = 422/621 (67.95%), Query Frame = 0


Query: 6   VVAKSISNPLSFQFFESKYMVSKSKLSSLFIIQSPRIASSNPNKYS------------QP 65
           +V+K++++ +S     +    SK KLSSLF  + P IASSNP   S             P
Sbjct: 1   MVSKTVASAISSSLSPAP---SKGKLSSLF-TRPPIIASSNPQNPSPIPAESPPIISKPP 60

Query: 66  KSTKSPAISSQ---------EQLRKFLQNCKTGNNVTKSESFQFFNLMIRANPTIPISAF 125
            S  SP +S +         E+LR FLQNCKTG N T SE+FQFF+LM+ ANPT  +S+F
Sbjct: 61  NSNVSPEVSLEKSTTEIPFHERLRTFLQNCKTG-NFTVSEAFQFFDLMMLANPTPAMSSF 120

Query: 126 NVLLTGLAKLKYCSEVFQLYHRMASSGLLPDFFTLNILLNCLSNVNRVTEGLAVAAVMIR 185
           N+LL GLAK K+ SEV +LY+RM+ +GLLP++ TLNILLNCL NVNR++EGLA  A +IR
Sbjct: 121 NLLLGGLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIR 180

Query: 186 RGYNPNVVTYTSLIKGLCRENRTSEATRLFMRMQKLGCNPSVVTFNVIMDMLCKNGKVLE 245
           RG+ PN+VTYTSLIKGLC E+R SEATRLFMRMQKLGC P+V+                 
Sbjct: 181 RGFIPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVI----------------- 240

Query: 246 AKELLKVMIQSGNVPSLFTYNSLMYGFCLVGDLKSAMELFGSMKSNGCEPDATTYGTLLK 305
                                                                TYGTL+K
Sbjct: 241 -----------------------------------------------------TYGTLIK 300

Query: 306 GHFQTGNTKLALKLHEELLNGTGQYADSC---------------------KAMEMFEEMK 365
           G  QTGNT +ALKLHEE+LNGTG+Y  SC                     KA E+FEEMK
Sbjct: 301 GLCQTGNTNIALKLHEEMLNGTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMK 360

Query: 366 AQGVLPDVISYNSLIHGFCNGGKWEEAKLLFNEMVDQGVRLNVATFNVIMDMHCKKGKVI 425
           A+ +LPDVISY+SLIHGFCNGGKWEEAK LFNEMVD G++ N  TFNV+MD+ CK GKVI
Sbjct: 361 ARRMLPDVISYSSLIHGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVI 420

Query: 426 EAKKLWEVMIQRGNVPDLFSYNILMDGFCLVGDLKSAKKLFVSMTSKGCEPNVISYGVLI 485
           EA +L EVMIQRGNVPDLF+YN LMDGFCLV DL SA++LF+SM SKGCEPNVISY VLI
Sbjct: 421 EANELLEVMIQRGNVPDLFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLI 480

Query: 486 NGYCKNLKVEEAMNLYNEMLQVGVRPNVITYNALLTGLFLAGKVDDARKIFCVIQDNGVA 545
           NGYCKN KVEEAM +YNEMLQVG++P+VITYNALLTGLF AGKV+DA+KIF VIQ +G+ 
Sbjct: 481 NGYCKNWKVEEAMKIYNEMLQVGIKPSVITYNALLTGLFQAGKVNDAKKIFGVIQAHGLV 540

Query: 546 LSSCTVCIVLDGLCKNDYLLEALKLFNELSY--KSNIDILNCVINGLCKAGKLETAWEVF 583
            SS T+ I +DGLCKND LLEA+++FNELSY  K +IDI NC+I+GLCKAGKLETAWE F
Sbjct: 541 PSSSTLSIFVDGLCKNDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFF 546

[Close]

BLAST of Sed0014077 vs. NCBI nr
Match: KAG6575955.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 632.9 bits (1631), Expect = 2.8e-177
Identity = 353/621 (56.84%), Postives = 422/621 (67.95%), Query Frame = 0


Query: 6   VVAKSISNPLSFQFFESKYMVSKSKLSSLFIIQSPRIASSNPNKYS------------QP 65
           +V+K++++ +S     +    SK KLSSLF  + P IASSNP   S             P
Sbjct: 1   MVSKTVASAISSSLSPAP---SKGKLSSLF-TRPPIIASSNPQNPSPIPAESPPIISKPP 60

Query: 66  KSTKSPAISSQ---------EQLRKFLQNCKTGNNVTKSESFQFFNLMIRANPTIPISAF 125
            S  SP +S +         E+LR FLQNCKTG N T SE+FQFF+LM+ ANPT  +S+F
Sbjct: 61  NSNVSPEVSLEKSTTEIPFHERLRTFLQNCKTG-NFTVSEAFQFFDLMMLANPTPAMSSF 120

Query: 126 NVLLTGLAKLKYCSEVFQLYHRMASSGLLPDFFTLNILLNCLSNVNRVTEGLAVAAVMIR 185
           N+LL GLAK K+ SEV +LY+RM+ +GLLP++ TLNILLNCL NVNR++EGLA  A +IR
Sbjct: 121 NLLLGGLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIR 180

Query: 186 RGYNPNVVTYTSLIKGLCRENRTSEATRLFMRMQKLGCNPSVVTFNVIMDMLCKNGKVLE 245
           RG+ PN+VTYTSLIKGLC E+R SEATRLFMRMQKLGC P+V+                 
Sbjct: 181 RGFIPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVI----------------- 240

Query: 246 AKELLKVMIQSGNVPSLFTYNSLMYGFCLVGDLKSAMELFGSMKSNGCEPDATTYGTLLK 305
                                                                TYGTL+K
Sbjct: 241 -----------------------------------------------------TYGTLIK 300

Query: 306 GHFQTGNTKLALKLHEELLNGTGQYADSC---------------------KAMEMFEEMK 365
           G  QTGNT +ALKLHEE+LNGTG+Y  SC                     KA E+FEEMK
Sbjct: 301 GLCQTGNTNIALKLHEEMLNGTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMK 360

Query: 366 AQGVLPDVISYNSLIHGFCNGGKWEEAKLLFNEMVDQGVRLNVATFNVIMDMHCKKGKVI 425
           A+ +LPDVISY+SLIHGFCNGGKWEEAK LFNEMVD G++ N  TFNV+MD+ CK GKVI
Sbjct: 361 ARRMLPDVISYSSLIHGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVI 420

Query: 426 EAKKLWEVMIQRGNVPDLFSYNILMDGFCLVGDLKSAKKLFVSMTSKGCEPNVISYGVLI 485
           EA +L EVMIQRGNVPDLF+YN LMDGFCLV DL SA++LF+SM SKGCEPNVISY VLI
Sbjct: 421 EANELLEVMIQRGNVPDLFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLI 480

Query: 486 NGYCKNLKVEEAMNLYNEMLQVGVRPNVITYNALLTGLFLAGKVDDARKIFCVIQDNGVA 545
           NGYCKN KVEEAM +YNEMLQVG++P+VITYNALLTGLF AGKV+DA+KIF VIQ +G+ 
Sbjct: 481 NGYCKNWKVEEAMKIYNEMLQVGIKPSVITYNALLTGLFQAGKVNDAKKIFGVIQAHGLV 540

Query: 546 LSSCTVCIVLDGLCKNDYLLEALKLFNELSY--KSNIDILNCVINGLCKAGKLETAWEVF 583
            SS T+ I +DGLCKND LLEA+++FNELSY  K +IDI NC+I+GLCKAGKLETAWE F
Sbjct: 541 PSSSTLSIFVDGLCKNDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFF 546

[Close]

BLAST of Sed0014077 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 345.9 bits (886), Expect = 9.0e-94
Identity = 190/502 (37.85%), Postives = 286/502 (56.97%), Query Frame = 0


Query: 84  ESFQFFNLMIRANPTIPISAFNVLLTGLAKLKYCSEVFQLYHRMASSGLLPDFFTLNILL 143
           ++   F  M+++ P   I  FN LL+ +AK+     V  L  RM +  +  D ++ NIL+
Sbjct: 63  DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122

Query: 144 NCLSNVNRVTEGLAVAAVMIRRGYNPNVVTYTSLIKGLCRENRTSEATRLFMRMQKLGCN 203
           NC    +++   LAV   M++ GY P++VT +SL+ G C   R SEA  L  +M  +   
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182

Query: 204 PSVVTFNVIMDMLCKNGKVLEAKELLKVMIQSGNVPSLFTYNSLMYGFCLVGDLKSAMEL 263
           P+ VTFN ++  L  + K  EA  L+  M+  G  P LFTY +++ G C  GD+  A+ L
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242

Query: 264 FGSMKSNGCEPDATTYGTLLKGHFQTGNTKLALKLHEELLNGTGQYADSCKAMEMFEEMK 323
              M+    E D   Y T++                + L N    Y +   A+ +F EM 
Sbjct: 243 LKKMEKGKIEADVVIYTTII----------------DALCN----YKNVNDALNLFTEMD 302

Query: 324 AQGVLPDVISYNSLIHGFCNGGKWEEAKLLFNEMVDQGVRLNVATFNVIMDMHCKKGKVI 383
            +G+ P+V++YNSLI   CN G+W +A  L ++M+++ +  NV TF+ ++D   K+GK++
Sbjct: 303 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 362

Query: 384 EAKKLWEVMIQRGNVPDLFSYNILMDGFCLVGDLKSAKKLFVSMTSKGCEPNVISYGVLI 443
           EA+KL++ MI+R   PD+F+Y+ L++GFC+   L  AK +F  M SK C PNV++Y  LI
Sbjct: 363 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 422

Query: 444 NGYCKNLKVEEAMNLYNEMLQVGVRPNVITYNALLTGLFLAGKVDDARKIFCVIQDNGVA 503
            G+CK  +VEE M L+ EM Q G+  N +TYN L+ GLF AG  D A+KIF  +  +GV 
Sbjct: 423 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 482

Query: 504 LSSCTVCIVLDGLCKNDYLLEALKLFNEL---SYKSNIDILNCVINGLCKAGKLETAWEV 563
               T  I+LDGLCK   L +AL +F  L     + +I   N +I G+CKAGK+E  W++
Sbjct: 483 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 542

Query: 564 FNKLSHNGFLPNVVTYSTIIQG 583
           F  LS  G  PNV+ Y+T+I G
Sbjct: 543 FCSLSLKGVKPNVIIYTTMISG 544

[Close]

BLAST of Sed0014077 vs. ExPASy Swiss-Prot
Match: Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.3e-92
Identity = 187/524 (35.69%), Postives = 294/524 (56.11%), Query Frame = 0


Query: 62  SSQEQLRKFLQNCKTGNNVTKSESFQFFNLMIRANPTIPISAFNVLLTGLAKLKYCSEVF 121
           S+    R+ L+N +  + +   ++   F  M+++ P   I  FN LL+ +AK+     V 
Sbjct: 45  SASGDYREILRN-RLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVI 104

Query: 122 QLYHRMASSGLLPDFFTLNILLNCLSNVNRVTEGLAVAAVMIRRGYNPNVVTYTSLIKGL 181
            L  +M + G+  D +T +I +NC    ++++  LAV A M++ GY P++VT +SL+ G 
Sbjct: 105 SLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGY 164

Query: 182 CRENRTSEATRLFMRMQKLGCNPSVVTFNVIMDMLCKNGKVLEAKELLKVMIQSGNVPSL 241
           C   R S+A  L  +M ++G  P   TF  ++  L  + K  EA  L+  M+Q G  P L
Sbjct: 165 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 224

Query: 242 FTYNSLMYGFCLVGDLKSAMELFGSMKSNGCEPDATTYGTLLKGHFQTGNTKLALKLHEE 301
            TY +++ G C  GD+  A+ L   M+    E D   Y T                    
Sbjct: 225 VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT-------------------- 284

Query: 302 LLNGTGQYADSCKAMEMFEEMKAQGVLPDVISYNSLIHGFCNGGKWEEAKLLFNEMVDQG 361
           +++G  +Y     A+ +F EM  +G+ PDV +Y+SLI   CN G+W +A  L ++M+++ 
Sbjct: 285 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 344

Query: 362 VRLNVATFNVIMDMHCKKGKVIEAKKLWEVMIQRGNVPDLFSYNILMDGFCLVGDLKSAK 421
           +  NV TF+ ++D   K+GK++EA+KL++ MI+R   PD+F+Y+ L++GFC+   L  AK
Sbjct: 345 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 404

Query: 422 KLFVSMTSKGCEPNVISYGVLINGYCKNLKVEEAMNLYNEMLQVGVRPNVITYNALLTGL 481
            +F  M SK C PNV++Y  LI G+CK  +VEE M L+ EM Q G+  N +TY  L+ G 
Sbjct: 405 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 464

Query: 482 FLAGKVDDARKIFCVIQDNGVALSSCTVCIVLDGLCKNDYLLEALKLFNEL---SYKSNI 541
           F A   D+A+ +F  +   GV  +  T  I+LDGLCKN  L +A+ +F  L   + + +I
Sbjct: 465 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 524

Query: 542 DILNCVINGLCKAGKLETAWEVFNKLSHNGFLPNVVTYSTIIQG 583
              N +I G+CKAGK+E  WE+F  LS  G  PNV+ Y+T+I G
Sbjct: 525 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG 547

[Close]

BLAST of Sed0014077 vs. ExPASy Swiss-Prot
Match: Q9CAN0 (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.9e-91
Identity = 182/508 (35.83%), Postives = 289/508 (56.89%), Query Frame = 0


Query: 78  NNVTKSESFQFFNLMIRANPTIPISAFNVLLTGLAKLKYCSEVFQLYHRMASSGLLPDFF 137
           N++   ++   F  M+++ P   I  F+ LL+ +AK+     V  L  +M + G+  + +
Sbjct: 58  NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117

Query: 138 TLNILLNCLSNVNRVTEGLAVAAVMIRRGYNPNVVTYTSLIKGLCRENRTSEATRLFMRM 197
           T +IL+NC    ++++  LAV A M++ GY P++VT  SL+ G C  NR S+A  L  +M
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177

Query: 198 QKLGCNPSVVTFNVIMDMLCKNGKVLEAKELLKVMIQSGNVPSLFTYNSLMYGFCLVGDL 257
            ++G  P   TFN ++  L ++ +  EA  L+  M+  G  P L TY  ++ G C  GD+
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237

Query: 258 KSAMELFGSMKSNGCEPDATTYGTLLKGHFQTGNTKLALKLHEELLNGTGQYADSCKAME 317
             A+ L   M+    EP    Y T++                + L N    Y +   A+ 
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTII----------------DALCN----YKNVNDALN 297

Query: 318 MFEEMKAQGVLPDVISYNSLIHGFCNGGKWEEAKLLFNEMVDQGVRLNVATFNVIMDMHC 377
           +F EM  +G+ P+V++YNSLI   CN G+W +A  L ++M+++ +  NV TF+ ++D   
Sbjct: 298 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 357

Query: 378 KKGKVIEAKKLWEVMIQRGNVPDLFSYNILMDGFCLVGDLKSAKKLFVSMTSKGCEPNVI 437
           K+GK++EA+KL++ MI+R   PD+F+Y+ L++GFC+   L  AK +F  M SK C PNV+
Sbjct: 358 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 417

Query: 438 SYGVLINGYCKNLKVEEAMNLYNEMLQVGVRPNVITYNALLTGLFLAGKVDDARKIFCVI 497
           +Y  LI G+CK  +V+E M L+ EM Q G+  N +TY  L+ G F A + D+A+ +F  +
Sbjct: 418 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 477

Query: 498 QDNGVALSSCTVCIVLDGLCKNDYLLEALKLFNEL---SYKSNIDILNCVINGLCKAGKL 557
             +GV     T  I+LDGLC N  +  AL +F  L     + +I   N +I G+CKAGK+
Sbjct: 478 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 537

Query: 558 ETAWEVFNKLSHNGFLPNVVTYSTIIQG 583
           E  W++F  LS  G  PNVVTY+T++ G
Sbjct: 538 EDGWDLFCSLSLKGVKPNVVTYTTMMSG 545

[Close]

BLAST of Sed0014077 vs. ExPASy Swiss-Prot
Match: Q9C8T7 (Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX=3702 GN=At1g63330 PE=2 SV=2)

HSP 1 Score: 333.2 bits (853), Expect = 6.0e-90
Identity = 175/495 (35.35%), Postives = 285/495 (57.58%), Query Frame = 0


Query: 92  MIRANPTIPISAFNVLLTGLAKLKYCSEVFQLYHRMASSGLLPDFFTLNILLNCLSNVNR 151
           M+++ P   I  FN LL+ +AK+K    V  L  +M   G+  + +T NIL+NC    ++
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 152 VTEGLAVAAVMIRRGYNPNVVTYTSLIKGLCRENRTSEATRLFMRMQKLGCNPSVVTFNV 211
           ++  LA+   M++ GY P++VT +SL+ G C   R S+A  L  +M ++G  P  +TF  
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 212 IMDMLCKNGKVLEAKELLKVMIQSGNVPSLFTYNSLMYGFCLVGDLKSAMELFGSMKSNG 271
           ++  L  + K  EA  L+  M+Q G  P+L TY  ++ G C  GD+  A  L   M++  
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 272 CEPDATTYGTLLKGHFQTGNTKLALKLHEELLNGTGQYADSCKAMEMFEEMKAQGVLPDV 331
            E D   + T                    +++   +Y     A+ +F+EM+ +G+ P+V
Sbjct: 181 IEADVVIFNT--------------------IIDSLCKYRHVDDALNLFKEMETKGIRPNV 240

Query: 332 ISYNSLIHGFCNGGKWEEAKLLFNEMVDQGVRLNVATFNVIMDMHCKKGKVIEAKKLWEV 391
           ++Y+SLI   C+ G+W +A  L ++M+++ +  N+ TFN ++D   K+GK +EA+KL + 
Sbjct: 241 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 300

Query: 392 MIQRGNVPDLFSYNILMDGFCLVGDLKSAKKLFVSMTSKGCEPNVISYGVLINGYCKNLK 451
           MI+R   PD+F+YN L++GFC+   L  AK++F  M SK C P++ +Y  LI G+CK+ +
Sbjct: 301 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 360

Query: 452 VEEAMNLYNEMLQVGVRPNVITYNALLTGLFLAGKVDDARKIFCVIQDNGVALSSCTVCI 511
           VE+   L+ EM   G+  + +TY  L+ GLF  G  D+A+K+F  +  +GV     T  I
Sbjct: 361 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 420

Query: 512 VLDGLCKNDYLLEALKLFNEL---SYKSNIDILNCVINGLCKAGKLETAWEVFNKLSHNG 571
           +LDGLC N  L +AL++F+ +     K +I I   +I G+CKAGK++  W++F  LS  G
Sbjct: 421 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 475

Query: 572 FLPNVVTYSTIIQGV 584
             PNVVTY+T+I G+
Sbjct: 481 VKPNVVTYNTMISGL 475

[Close]

BLAST of Sed0014077 vs. ExPASy Swiss-Prot
Match: Q9SXD8 (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX=3702 GN=At1g62590 PE=2 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.0e-89
Identity = 187/551 (33.94%), Postives = 308/551 (55.90%), Query Frame = 0


Query: 39  SPRIASSNPNKYSQ---PKSTKSPAISSQEQLRKFLQNCKTGNNVTKSESFQFFNLMIRA 98
           +PRIA S+ +        ++  S +   +E LR  L + K        ++   F  M+++
Sbjct: 26  NPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHDMKL------DDAIGLFGGMVKS 85

Query: 99  NPTIPISAFNVLLTGLAKLKYCSEVFQLYHRMASSGLLPDFFTLNILLNCLSNVNRVTEG 158
            P   I  FN LL+ +AK+K    V  L  +M    ++   +T NIL+NC    ++++  
Sbjct: 86  RPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLA 145

Query: 159 LAVAAVMIRRGYNPNVVTYTSLIKGLCRENRTSEATRLFMRMQKLGCNPSVVTFNVIMDM 218
           LA+   M++ GY P++VT +SL+ G C   R S+A  L  +M ++G  P  +TF  ++  
Sbjct: 146 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 205

Query: 219 LCKNGKVLEAKELLKVMIQSGNVPSLFTYNSLMYGFCLVGDLKSAMELFGSMKSNGCEPD 278
           L  + K  EA  L+  M+Q G  P+L TY  ++ G C  GD   A+ L   M++   E D
Sbjct: 206 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 265

Query: 279 ATTYGTLLKGHFQTGNTKLALKLHEELLNGTGQYADSCKAMEMFEEMKAQGVLPDVISYN 338
              + T                    +++   +Y     A+ +F+EM+ +G+ P+V++Y+
Sbjct: 266 VVIFNT--------------------IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 325

Query: 339 SLIHGFCNGGKWEEAKLLFNEMVDQGVRLNVATFNVIMDMHCKKGKVIEAKKLWEVMIQR 398
           SLI   C+ G+W +A  L ++M+++ +  N+ TFN ++D   K+GK +EA+KL++ MI+R
Sbjct: 326 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 385

Query: 399 GNVPDLFSYNILMDGFCLVGDLKSAKKLFVSMTSKGCEPNVISYGVLINGYCKNLKVEEA 458
              PD+F+YN L++GFC+   L  AK++F  M SK C P+V++Y  LI G+CK+ +VE+ 
Sbjct: 386 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 445

Query: 459 MNLYNEMLQVGVRPNVITYNALLTGLFLAGKVDDARKIFCVIQDNGVALSSCTVCIVLDG 518
             L+ EM   G+  + +TY  L+ GLF  G  D+A+K+F  +  +GV     T  I+LDG
Sbjct: 446 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 505

Query: 519 LCKNDYLLEALKLFNEL---SYKSNIDILNCVINGLCKAGKLETAWEVFNKLSHNGFLPN 578
           LC N  L +AL++F+ +     K +I I   +I G+CKAGK++  W++F  LS  G  PN
Sbjct: 506 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 550

Query: 579 VVTYSTIIQGV 584
           VVTY+T+I G+
Sbjct: 566 VVTYNTMISGL 550

[Close]

BLAST of Sed0014077 vs. ExPASy TrEMBL
Match: A0A6J1JSG4 (pentatricopeptide repeat-containing protein At1g63330-like OS=Cucurbita maxima OX=3661 GN=LOC111488506 PE=4 SV=1)

HSP 1 Score: 634.8 bits (1636), Expect = 3.6e-178
Identity = 352/620 (56.77%), Postives = 418/620 (67.42%), Query Frame = 0


Query: 6   VVAKSISNPLSFQFFESKYMVSKSKLSSLFI-----------------IQSPRIASSNPN 65
           +V+K++++ +S     +    SK KLSSLF                   +SP + S  PN
Sbjct: 1   MVSKTVASAISSSLLPAP---SKGKLSSLFTHPTIIASSKPQNPSPISAESPPVISKPPN 60

Query: 66  KYSQPK---STKSPAISSQEQLRKFLQNCKTGNNVTKSESFQFFNLMIRANPTIPISAFN 125
               P+      +  IS  E+LR FLQNCKTG N T SE+ QFF+LM+ ANPT  +S+FN
Sbjct: 61  SNVSPEVSLEKSTTEISFHERLRTFLQNCKTG-NFTVSEALQFFDLMMLANPTPAMSSFN 120

Query: 126 VLLTGLAKLKYCSEVFQLYHRMASSGLLPDFFTLNILLNCLSNVNRVTEGLAVAAVMIRR 185
           +LL GLAK K+ SEV +LY+RM+ +GLLP++ TLNILLNCL NVNR++EGLA  A +IRR
Sbjct: 121 LLLGGLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRR 180

Query: 186 GYNPNVVTYTSLIKGLCRENRTSEATRLFMRMQKLGCNPSVVTFNVIMDMLCKNGKVLEA 245
           GY PN+VTYTSLIKGLC E+R SEATRLFMRMQKLGC P+V+                  
Sbjct: 181 GYVPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVI------------------ 240

Query: 246 KELLKVMIQSGNVPSLFTYNSLMYGFCLVGDLKSAMELFGSMKSNGCEPDATTYGTLLKG 305
                                                               TYGTL+KG
Sbjct: 241 ----------------------------------------------------TYGTLIKG 300

Query: 306 HFQTGNTKLALKLHEELLNGTGQYADSC---------------------KAMEMFEEMKA 365
             QTGNT +ALKLHEE+LNGTG+Y  SC                     KA E+FEEMKA
Sbjct: 301 LCQTGNTNIALKLHEEMLNGTGRYGISCKPNVICYSTIIDGLCKDGREDKARELFEEMKA 360

Query: 366 QGVLPDVISYNSLIHGFCNGGKWEEAKLLFNEMVDQGVRLNVATFNVIMDMHCKKGKVIE 425
           + +LPDVISY+SLIHGFCNGGKWEEAK LFNEMVD G++ N  TFNV+MD+ CK GKVIE
Sbjct: 361 RRMLPDVISYSSLIHGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIE 420

Query: 426 AKKLWEVMIQRGNVPDLFSYNILMDGFCLVGDLKSAKKLFVSMTSKGCEPNVISYGVLIN 485
           A KL EVMIQRGNVPDLF YN LMDGFCLV DL+SA++LF+SM SKGCEPNVISY VLIN
Sbjct: 421 ANKLLEVMIQRGNVPDLFIYNTLMDGFCLVSDLESARELFLSMPSKGCEPNVISYNVLIN 480

Query: 486 GYCKNLKVEEAMNLYNEMLQVGVRPNVITYNALLTGLFLAGKVDDARKIFCVIQDNGVAL 545
           GYCKN KVEEAM +YNEMLQVGV+P+VITYNALLTGLF AGKVDDA+KIF VIQ +G+  
Sbjct: 481 GYCKNWKVEEAMKIYNEMLQVGVKPSVITYNALLTGLFQAGKVDDAKKIFGVIQAHGLVP 540

Query: 546 SSCTVCIVLDGLCKNDYLLEALKLFNELSY--KSNIDILNCVINGLCKAGKLETAWEVFN 583
           SS T+ I +DGLCKND LLEA+++FNELSY  K +IDI NC+I+GLCKAGKLETAWE F+
Sbjct: 541 SSSTLSIFVDGLCKNDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFD 546

[Close]

BLAST of Sed0014077 vs. ExPASy TrEMBL
Match: A0A6J1GP31 (putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111456184 PE=4 SV=1)

HSP 1 Score: 627.9 bits (1618), Expect = 4.4e-176
Identity = 353/620 (56.94%), Postives = 418/620 (67.42%), Query Frame = 0


Query: 7   VAKSISNPLSFQFFESKYMVSKSKLSSLFIIQSPRIASSNPNKYS------------QPK 66
           VA +IS+ LS          SK KLSSLF  + P IASSNP   S             P 
Sbjct: 6   VASAISSSLS-------PAPSKGKLSSLF-TRPPIIASSNPQNPSPIPAESPPIISKPPN 65

Query: 67  STKSPAISSQE---------QLRKFLQNCKTGNNVTKSESFQFFNLMIRANPTIPISAFN 126
           S  SP +S ++         +LR FLQNCKTG N T SE+ QFF+LM+ ANPT  +S+FN
Sbjct: 66  SNVSPEVSLEKSTTEISFHGRLRTFLQNCKTG-NFTVSEALQFFDLMMLANPTPAMSSFN 125

Query: 127 VLLTGLAKLKYCSEVFQLYHRMASSGLLPDFFTLNILLNCLSNVNRVTEGLAVAAVMIRR 186
           +LL GLAK K+ SEV +LY+RM+ +GLLP++ TLNILLNCL NVNR++EGLA  A +IRR
Sbjct: 126 LLLGGLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRR 185

Query: 187 GYNPNVVTYTSLIKGLCRENRTSEATRLFMRMQKLGCNPSVVTFNVIMDMLCKNGKVLEA 246
           G+ PN+VTYTSLIKGLC E+R SEATRLFMRMQKLGC P+V+                  
Sbjct: 186 GFIPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVI------------------ 245

Query: 247 KELLKVMIQSGNVPSLFTYNSLMYGFCLVGDLKSAMELFGSMKSNGCEPDATTYGTLLKG 306
                                                               TYGTL+KG
Sbjct: 246 ----------------------------------------------------TYGTLIKG 305

Query: 307 HFQTGNTKLALKLHEELLNGTGQYADSC---------------------KAMEMFEEMKA 366
             QTGNT +ALKLHEE+LNGTG+Y  SC                     KA E+FEEMKA
Sbjct: 306 LCQTGNTNIALKLHEEMLNGTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKA 365

Query: 367 QGVLPDVISYNSLIHGFCNGGKWEEAKLLFNEMVDQGVRLNVATFNVIMDMHCKKGKVIE 426
           + +LPDVISY+SLIHGFCNGGKWEEAK LFNEMVD G++ N  TFNV+MD+ CK GKVIE
Sbjct: 366 RRMLPDVISYSSLIHGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIE 425

Query: 427 AKKLWEVMIQRGNVPDLFSYNILMDGFCLVGDLKSAKKLFVSMTSKGCEPNVISYGVLIN 486
           A +L EVMIQRGNVPDLF+YN LMDGFCLV DL SA++LF+SM SKGCEPNVISY VLIN
Sbjct: 426 ANELLEVMIQRGNVPDLFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLIN 485

Query: 487 GYCKNLKVEEAMNLYNEMLQVGVRPNVITYNALLTGLFLAGKVDDARKIFCVIQDNGVAL 546
           GYCKN KVEEAM +YNEMLQVG++P++ITYNALLTGLF AGKV+DA+KIF VIQ +G+  
Sbjct: 486 GYCKNWKVEEAMKIYNEMLQVGIKPSMITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVP 545

Query: 547 SSCTVCIVLDGLCKNDYLLEALKLFNELSY--KSNIDILNCVINGLCKAGKLETAWEVFN 583
           SS T+ I +DGLCKND LLEA+++FNELSY  K +IDI NC+I+GLCKAGKLETAWE F+
Sbjct: 546 SSSTLSIFVDGLCKNDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFD 546

[Close]

BLAST of Sed0014077 vs. ExPASy TrEMBL
Match: A0A6J1DSW3 (pentatricopeptide repeat-containing protein At1g63330-like OS=Momordica charantia OX=3673 GN=LOC111022854 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 1.2e-173
Identity = 352/624 (56.41%), Postives = 416/624 (66.67%), Query Frame = 0


Query: 6   VVAKSISNPLSFQFFESKYMVSKSKLSSLFIIQSPRIASSNPN------------KYSQP 65
           +V+KS+++  S     S    +K KLSSLF  QSPRI SSNP                 P
Sbjct: 1   MVSKSVASASSVVAVSSS-APAKGKLSSLF-TQSPRIRSSNPQVSPGSSSKRPPLLSRPP 60

Query: 66  KSTKSP---------AISSQEQLRKFLQNCKTGNNVTKSESFQFFNLMIRANPTIPISAF 125
           K T SP          IS Q++ R FLQNCKTG NVT +E+ QFF+LM+R  PT  +S+F
Sbjct: 61  KPTVSPEDSPEELTTGISFQDRHRTFLQNCKTG-NVTAAEALQFFDLMLRTKPTPAMSSF 120

Query: 126 NVLLTGLAKLKYCSEVFQLYHRMASSGLLPDFFTLNILLNCLSNVNRVTEGLAVAAVMIR 185
           N+LL GLAK+K+ SEV  LY RM+ +G+LP++ TLNILLNCL NVNRV+EGLA  A +IR
Sbjct: 121 NLLLGGLAKIKHYSEVLSLYDRMSLAGILPNYITLNILLNCLCNVNRVSEGLAAMAGIIR 180

Query: 186 RGYNPNVVTYTSLIKGLCRENRTSEATRLFMRMQKLGCNPSVVTFNVIMDMLCKNGKVLE 245
           RGY PN+VTYTSLIKGLC E+R SEATRLFMRMQKLGC P+V+                 
Sbjct: 181 RGYIPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCTPNVI----------------- 240

Query: 246 AKELLKVMIQSGNVPSLFTYNSLMYGFCLVGDLKSAMELFGSMKSNGCEPDATTYGTLLK 305
                                                                TYGTL+K
Sbjct: 241 -----------------------------------------------------TYGTLIK 300

Query: 306 GHFQTGNTKLALKLHEELLNGTGQYADSC---------------------KAMEMFEEMK 365
           G  QTGNT +ALKLHEE+LNGTG+Y  +C                     KA E+FEEMK
Sbjct: 301 GLCQTGNTNIALKLHEEMLNGTGRYGITCKPNVICYSTIIDGLCKDGLEDKARELFEEMK 360

Query: 366 AQGVLPDVISYNSLIHGFCNGGKWEEAKLLFNEMVDQGVRLNVATFNVIMDMHCKKGKVI 425
           AQG+LPDVISY+SLIHGFC GGKWEEAK LFNEMVD GV+ NV TFNV+MDM CK GKVI
Sbjct: 361 AQGMLPDVISYSSLIHGFCYGGKWEEAKSLFNEMVDHGVQPNVVTFNVLMDMLCKAGKVI 420

Query: 426 EAKKLWEVMIQRG-NVPDLFSYNILMDGFCLVGDLKSAKKLFVSMTSKGCEPNVISYGVL 485
           EAK+L E+M+Q G N PDLF+YN LMDGFCLVGDL SA++LF++M +KGCEPNVISY VL
Sbjct: 421 EAKELLELMVQGGNNAPDLFTYNTLMDGFCLVGDLNSARELFINMPNKGCEPNVISYNVL 480

Query: 486 INGYCKNLKVEEAMNLYNEMLQVGVRPNVITYNALLTGLFLAGKVDDARKIFCVIQDNGV 545
           INGYCKN K+EEAM LYNEMLQVG+RP+VITYN+LLTGLF AG V DA+K+F VIQ NG+
Sbjct: 481 INGYCKNWKMEEAMKLYNEMLQVGIRPSVITYNSLLTGLFQAGMVVDAKKLFGVIQANGL 540

Query: 546 ALSSCTVCIVLDGLCKNDYLLEALKLFNEL---SYKSNIDILNCVINGLCKAGKLETAWE 584
           A SS T    LDGLCKND LLEA++LFN L   + K NI+I NC+I+GLCKAGKLETAWE
Sbjct: 541 APSSSTYSTFLDGLCKNDCLLEAIELFNGLKPYNLKLNIEIFNCLIDGLCKAGKLETAWE 551

[Close]

BLAST of Sed0014077 vs. ExPASy TrEMBL
Match: A0A1S4DYL6 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103492586 PE=4 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 3.1e-153
Identity = 298/547 (54.48%), Postives = 369/547 (67.46%), Query Frame = 0


Query: 61  ISSQEQLRKFLQNCKTGNNVTKSESFQFFNLMIRANPTIPISAFNVLLTGLAKLKYCSEV 120
           ++S  Q+  FL+NCKTG N+T +++F FF+LM+R+ P  PIS+F+ LL GLAK+K+ S +
Sbjct: 1   MASTSQIPIFLRNCKTG-NITATQAFHFFDLMLRSYPIPPISSFDCLLGGLAKIKHYSLL 60

Query: 121 FQLYHRMASSGLLPDFFTLNILLNCLSNVNRVTEGLAVAAVMIRRGYNPNVVTYTSLIKG 180
           F LY++M  +GL P   TLNIL+NCL NVNRV+E LA  A ++RRGY PNVVTYT+LIKG
Sbjct: 61  FSLYNKMRLAGLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKG 120

Query: 181 LCRENRTSEATRLFMRMQKLGCNPSVVTFNVIMDMLCKNGKVLEAKELLKVMIQSGNVPS 240
           LC E+R SEATRLF+RMQKLGC P+VV                                 
Sbjct: 121 LCMEHRISEATRLFLRMQKLGCTPNVV--------------------------------- 180

Query: 241 LFTYNSLMYGFCLVGDLKSAMELFGSMKSNGCEPDATTYGTLLKGHFQTGNTKLALKLHE 300
                                                TYGTL+KG  QTGN  +ALKLH+
Sbjct: 181 -------------------------------------TYGTLVKGLCQTGNVNIALKLHQ 240

Query: 301 ELLNGTGQYADSCK---------------------AMEMFEEMKAQGVLPDVISYNSLIH 360
           E+LN T QY  +CK                     A E+FEEMKAQG++P+VISY+SLIH
Sbjct: 241 EMLNDTSQYGINCKPNVFNYNIIIDGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIH 300

Query: 361 GFCNGGKWEEAKLLFNEMVDQGVRLNVATFNVIMDMHCKKGKVIEAKKLWEVMIQRGNVP 420
           GFC   KWEE+K LF+EMVDQGV+ +  TF+V++D  CK+GKVIEAKKL+EVMIQRG VP
Sbjct: 301 GFCCARKWEESKRLFDEMVDQGVQPDKVTFSVLIDTLCKEGKVIEAKKLFEVMIQRGIVP 360

Query: 421 DLFSYNILMDGFCLVGDLKSAKKLFVSMTSKGCEPNVISYGVLINGYCKNLKVEEAMNLY 480
           DLF Y+ LM+GFC+VGDL SA++LFVSM SKGCEP+VISY VLINGYCK LKVEEAM LY
Sbjct: 361 DLFIYSSLMEGFCMVGDLNSARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLY 420

Query: 481 NEMLQVGVRPNVITYNALLTGLFLAGKVDDARKIFCVIQDNGVALSSCTVCIVLDGLCKN 540
           NEML VG RPNVITY ALLTGLFLAGKV DA+K+F  ++  G++ +S    I+LDGLCKN
Sbjct: 421 NEMLLVGKRPNVITYGALLTGLFLAGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKN 476

Query: 541 DYLLEALKLFNEL---SYKSNIDILNCVINGLCKAGKLETAWEVFNKLSHNGFLPNVVTY 584
             L EA+KLF EL   ++K +I+  +C+I+GLCK GKLETAWE+F KLS  G  PNVVTY
Sbjct: 481 GCLFEAMKLFTELKSYNFKLDIETYSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTY 476

[Close]

BLAST of Sed0014077 vs. ExPASy TrEMBL
Match: A0A5D3C8J0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00440 PE=4 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 2.6e-152
Identity = 297/547 (54.30%), Postives = 368/547 (67.28%), Query Frame = 0


Query: 61  ISSQEQLRKFLQNCKTGNNVTKSESFQFFNLMIRANPTIPISAFNVLLTGLAKLKYCSEV 120
           ++S  Q+  FL+NCKTG N+T +++F FF+LM+R+ P   IS+F+ LL GLAK+K+ S +
Sbjct: 1   MASTSQIPIFLRNCKTG-NITATQAFHFFDLMLRSYPIPSISSFDCLLGGLAKIKHYSLL 60

Query: 121 FQLYHRMASSGLLPDFFTLNILLNCLSNVNRVTEGLAVAAVMIRRGYNPNVVTYTSLIKG 180
           F LY++M  +GL P   TLNIL+NCL NVNRV+E LA  A ++RRGY PNVVTYT+LIKG
Sbjct: 61  FSLYNKMRLAGLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKG 120

Query: 181 LCRENRTSEATRLFMRMQKLGCNPSVVTFNVIMDMLCKNGKVLEAKELLKVMIQSGNVPS 240
           LC E+R SEATRLF+RMQKLGC P+VV                                 
Sbjct: 121 LCMEHRISEATRLFLRMQKLGCTPNVV--------------------------------- 180

Query: 241 LFTYNSLMYGFCLVGDLKSAMELFGSMKSNGCEPDATTYGTLLKGHFQTGNTKLALKLHE 300
                                                TYGTL+KG  QTGN  +ALKLH+
Sbjct: 181 -------------------------------------TYGTLVKGLCQTGNVNIALKLHQ 240

Query: 301 ELLNGTGQYADSCK---------------------AMEMFEEMKAQGVLPDVISYNSLIH 360
           E+LN T QY  +CK                     A E+FEEMKAQG++P+VISY+SLIH
Sbjct: 241 EMLNDTSQYGINCKPNVFNYNIIIDGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIH 300

Query: 361 GFCNGGKWEEAKLLFNEMVDQGVRLNVATFNVIMDMHCKKGKVIEAKKLWEVMIQRGNVP 420
           GFC   KWEE+K LF+EMVDQGV+ +  TF+V++D  CK+GKVIEAKKL+EVMIQRG VP
Sbjct: 301 GFCCARKWEESKRLFDEMVDQGVQPDKVTFSVLIDTLCKEGKVIEAKKLFEVMIQRGIVP 360

Query: 421 DLFSYNILMDGFCLVGDLKSAKKLFVSMTSKGCEPNVISYGVLINGYCKNLKVEEAMNLY 480
           DLF Y+ LM+GFC+VGDL SA++LFVSM SKGCEP+VISY VLINGYCK LKVEEAM LY
Sbjct: 361 DLFIYSSLMEGFCMVGDLNSARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLY 420

Query: 481 NEMLQVGVRPNVITYNALLTGLFLAGKVDDARKIFCVIQDNGVALSSCTVCIVLDGLCKN 540
           NEML VG RPNVITY ALLTGLFLAGKV DA+K+F  ++  G++ +S    I+LDGLCKN
Sbjct: 421 NEMLLVGKRPNVITYGALLTGLFLAGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKN 476

Query: 541 DYLLEALKLFNEL---SYKSNIDILNCVINGLCKAGKLETAWEVFNKLSHNGFLPNVVTY 584
             L EA+KLF EL   ++K +I+  +C+I+GLCK GKLETAWE+F KLS  G  PNVVTY
Sbjct: 481 GCLFEAMKLFTELKSYNFKLDIETYSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTY 476

[Close]

BLAST of Sed0014077 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 345.9 bits (886), Expect = 6.4e-95
Identity = 190/502 (37.85%), Postives = 286/502 (56.97%), Query Frame = 0


Query: 84  ESFQFFNLMIRANPTIPISAFNVLLTGLAKLKYCSEVFQLYHRMASSGLLPDFFTLNILL 143
           ++   F  M+++ P   I  FN LL+ +AK+     V  L  RM +  +  D ++ NIL+
Sbjct: 63  DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122

Query: 144 NCLSNVNRVTEGLAVAAVMIRRGYNPNVVTYTSLIKGLCRENRTSEATRLFMRMQKLGCN 203
           NC    +++   LAV   M++ GY P++VT +SL+ G C   R SEA  L  +M  +   
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182

Query: 204 PSVVTFNVIMDMLCKNGKVLEAKELLKVMIQSGNVPSLFTYNSLMYGFCLVGDLKSAMEL 263
           P+ VTFN ++  L  + K  EA  L+  M+  G  P LFTY +++ G C  GD+  A+ L
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242

Query: 264 FGSMKSNGCEPDATTYGTLLKGHFQTGNTKLALKLHEELLNGTGQYADSCKAMEMFEEMK 323
              M+    E D   Y T++                + L N    Y +   A+ +F EM 
Sbjct: 243 LKKMEKGKIEADVVIYTTII----------------DALCN----YKNVNDALNLFTEMD 302

Query: 324 AQGVLPDVISYNSLIHGFCNGGKWEEAKLLFNEMVDQGVRLNVATFNVIMDMHCKKGKVI 383
            +G+ P+V++YNSLI   CN G+W +A  L ++M+++ +  NV TF+ ++D   K+GK++
Sbjct: 303 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 362

Query: 384 EAKKLWEVMIQRGNVPDLFSYNILMDGFCLVGDLKSAKKLFVSMTSKGCEPNVISYGVLI 443
           EA+KL++ MI+R   PD+F+Y+ L++GFC+   L  AK +F  M SK C PNV++Y  LI
Sbjct: 363 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 422

Query: 444 NGYCKNLKVEEAMNLYNEMLQVGVRPNVITYNALLTGLFLAGKVDDARKIFCVIQDNGVA 503
            G+CK  +VEE M L+ EM Q G+  N +TYN L+ GLF AG  D A+KIF  +  +GV 
Sbjct: 423 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 482

Query: 504 LSSCTVCIVLDGLCKNDYLLEALKLFNEL---SYKSNIDILNCVINGLCKAGKLETAWEV 563
               T  I+LDGLCK   L +AL +F  L     + +I   N +I G+CKAGK+E  W++
Sbjct: 483 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 542

Query: 564 FNKLSHNGFLPNVVTYSTIIQG 583
           F  LS  G  PNV+ Y+T+I G
Sbjct: 543 FCSLSLKGVKPNVIIYTTMISG 544

[Close]

BLAST of Sed0014077 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 342.0 bits (876), Expect = 9.2e-94
Identity = 187/524 (35.69%), Postives = 294/524 (56.11%), Query Frame = 0


Query: 62  SSQEQLRKFLQNCKTGNNVTKSESFQFFNLMIRANPTIPISAFNVLLTGLAKLKYCSEVF 121
           S+    R+ L+N +  + +   ++   F  M+++ P   I  FN LL+ +AK+     V 
Sbjct: 45  SASGDYREILRN-RLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVI 104

Query: 122 QLYHRMASSGLLPDFFTLNILLNCLSNVNRVTEGLAVAAVMIRRGYNPNVVTYTSLIKGL 181
            L  +M + G+  D +T +I +NC    ++++  LAV A M++ GY P++VT +SL+ G 
Sbjct: 105 SLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGY 164

Query: 182 CRENRTSEATRLFMRMQKLGCNPSVVTFNVIMDMLCKNGKVLEAKELLKVMIQSGNVPSL 241
           C   R S+A  L  +M ++G  P   TF  ++  L  + K  EA  L+  M+Q G  P L
Sbjct: 165 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 224

Query: 242 FTYNSLMYGFCLVGDLKSAMELFGSMKSNGCEPDATTYGTLLKGHFQTGNTKLALKLHEE 301
            TY +++ G C  GD+  A+ L   M+    E D   Y T                    
Sbjct: 225 VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT-------------------- 284

Query: 302 LLNGTGQYADSCKAMEMFEEMKAQGVLPDVISYNSLIHGFCNGGKWEEAKLLFNEMVDQG 361
           +++G  +Y     A+ +F EM  +G+ PDV +Y+SLI   CN G+W +A  L ++M+++ 
Sbjct: 285 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 344

Query: 362 VRLNVATFNVIMDMHCKKGKVIEAKKLWEVMIQRGNVPDLFSYNILMDGFCLVGDLKSAK 421
           +  NV TF+ ++D   K+GK++EA+KL++ MI+R   PD+F+Y+ L++GFC+   L  AK
Sbjct: 345 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 404

Query: 422 KLFVSMTSKGCEPNVISYGVLINGYCKNLKVEEAMNLYNEMLQVGVRPNVITYNALLTGL 481
            +F  M SK C PNV++Y  LI G+CK  +VEE M L+ EM Q G+  N +TY  L+ G 
Sbjct: 405 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 464

Query: 482 FLAGKVDDARKIFCVIQDNGVALSSCTVCIVLDGLCKNDYLLEALKLFNEL---SYKSNI 541
           F A   D+A+ +F  +   GV  +  T  I+LDGLCKN  L +A+ +F  L   + + +I
Sbjct: 465 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 524

Query: 542 DILNCVINGLCKAGKLETAWEVFNKLSHNGFLPNVVTYSTIIQG 583
              N +I G+CKAGK+E  WE+F  LS  G  PNV+ Y+T+I G
Sbjct: 525 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG 547

[Close]

BLAST of Sed0014077 vs. TAIR 10
Match: AT1G63130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 338.2 bits (866), Expect = 1.3e-92
Identity = 182/508 (35.83%), Postives = 289/508 (56.89%), Query Frame = 0


Query: 78  NNVTKSESFQFFNLMIRANPTIPISAFNVLLTGLAKLKYCSEVFQLYHRMASSGLLPDFF 137
           N++   ++   F  M+++ P   I  F+ LL+ +AK+     V  L  +M + G+  + +
Sbjct: 58  NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117

Query: 138 TLNILLNCLSNVNRVTEGLAVAAVMIRRGYNPNVVTYTSLIKGLCRENRTSEATRLFMRM 197
           T +IL+NC    ++++  LAV A M++ GY P++VT  SL+ G C  NR S+A  L  +M
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177

Query: 198 QKLGCNPSVVTFNVIMDMLCKNGKVLEAKELLKVMIQSGNVPSLFTYNSLMYGFCLVGDL 257
            ++G  P   TFN ++  L ++ +  EA  L+  M+  G  P L TY  ++ G C  GD+
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237

Query: 258 KSAMELFGSMKSNGCEPDATTYGTLLKGHFQTGNTKLALKLHEELLNGTGQYADSCKAME 317
             A+ L   M+    EP    Y T++                + L N    Y +   A+ 
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTII----------------DALCN----YKNVNDALN 297

Query: 318 MFEEMKAQGVLPDVISYNSLIHGFCNGGKWEEAKLLFNEMVDQGVRLNVATFNVIMDMHC 377
           +F EM  +G+ P+V++YNSLI   CN G+W +A  L ++M+++ +  NV TF+ ++D   
Sbjct: 298 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 357

Query: 378 KKGKVIEAKKLWEVMIQRGNVPDLFSYNILMDGFCLVGDLKSAKKLFVSMTSKGCEPNVI 437
           K+GK++EA+KL++ MI+R   PD+F+Y+ L++GFC+   L  AK +F  M SK C PNV+
Sbjct: 358 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 417

Query: 438 SYGVLINGYCKNLKVEEAMNLYNEMLQVGVRPNVITYNALLTGLFLAGKVDDARKIFCVI 497
           +Y  LI G+CK  +V+E M L+ EM Q G+  N +TY  L+ G F A + D+A+ +F  +
Sbjct: 418 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 477

Query: 498 QDNGVALSSCTVCIVLDGLCKNDYLLEALKLFNEL---SYKSNIDILNCVINGLCKAGKL 557
             +GV     T  I+LDGLC N  +  AL +F  L     + +I   N +I G+CKAGK+
Sbjct: 478 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 537

Query: 558 ETAWEVFNKLSHNGFLPNVVTYSTIIQG 583
           E  W++F  LS  G  PNVVTY+T++ G
Sbjct: 538 EDGWDLFCSLSLKGVKPNVVTYTTMMSG 545

[Close]

BLAST of Sed0014077 vs. TAIR 10
Match: AT1G63330.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 333.2 bits (853), Expect = 4.3e-91
Identity = 175/495 (35.35%), Postives = 285/495 (57.58%), Query Frame = 0


Query: 92  MIRANPTIPISAFNVLLTGLAKLKYCSEVFQLYHRMASSGLLPDFFTLNILLNCLSNVNR 151
           M+++ P   I  FN LL+ +AK+K    V  L  +M   G+  + +T NIL+NC    ++
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 152 VTEGLAVAAVMIRRGYNPNVVTYTSLIKGLCRENRTSEATRLFMRMQKLGCNPSVVTFNV 211
           ++  LA+   M++ GY P++VT +SL+ G C   R S+A  L  +M ++G  P  +TF  
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 212 IMDMLCKNGKVLEAKELLKVMIQSGNVPSLFTYNSLMYGFCLVGDLKSAMELFGSMKSNG 271
           ++  L  + K  EA  L+  M+Q G  P+L TY  ++ G C  GD+  A  L   M++  
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 272 CEPDATTYGTLLKGHFQTGNTKLALKLHEELLNGTGQYADSCKAMEMFEEMKAQGVLPDV 331
            E D   + T                    +++   +Y     A+ +F+EM+ +G+ P+V
Sbjct: 181 IEADVVIFNT--------------------IIDSLCKYRHVDDALNLFKEMETKGIRPNV 240

Query: 332 ISYNSLIHGFCNGGKWEEAKLLFNEMVDQGVRLNVATFNVIMDMHCKKGKVIEAKKLWEV 391
           ++Y+SLI   C+ G+W +A  L ++M+++ +  N+ TFN ++D   K+GK +EA+KL + 
Sbjct: 241 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 300

Query: 392 MIQRGNVPDLFSYNILMDGFCLVGDLKSAKKLFVSMTSKGCEPNVISYGVLINGYCKNLK 451
           MI+R   PD+F+YN L++GFC+   L  AK++F  M SK C P++ +Y  LI G+CK+ +
Sbjct: 301 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 360

Query: 452 VEEAMNLYNEMLQVGVRPNVITYNALLTGLFLAGKVDDARKIFCVIQDNGVALSSCTVCI 511
           VE+   L+ EM   G+  + +TY  L+ GLF  G  D+A+K+F  +  +GV     T  I
Sbjct: 361 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 420

Query: 512 VLDGLCKNDYLLEALKLFNEL---SYKSNIDILNCVINGLCKAGKLETAWEVFNKLSHNG 571
           +LDGLC N  L +AL++F+ +     K +I I   +I G+CKAGK++  W++F  LS  G
Sbjct: 421 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 475

Query: 572 FLPNVVTYSTIIQGV 584
             PNVVTY+T+I G+
Sbjct: 481 VKPNVVTYNTMISGL 475

[Close]

BLAST of Sed0014077 vs. TAIR 10
Match: AT1G62590.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 332.4 bits (851), Expect = 7.3e-91
Identity = 187/551 (33.94%), Postives = 308/551 (55.90%), Query Frame = 0


Query: 39  SPRIASSNPNKYSQ---PKSTKSPAISSQEQLRKFLQNCKTGNNVTKSESFQFFNLMIRA 98
           +PRIA S+ +        ++  S +   +E LR  L + K        ++   F  M+++
Sbjct: 26  NPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHDMKL------DDAIGLFGGMVKS 85

Query: 99  NPTIPISAFNVLLTGLAKLKYCSEVFQLYHRMASSGLLPDFFTLNILLNCLSNVNRVTEG 158
            P   I  FN LL+ +AK+K    V  L  +M    ++   +T NIL+NC    ++++  
Sbjct: 86  RPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLA 145

Query: 159 LAVAAVMIRRGYNPNVVTYTSLIKGLCRENRTSEATRLFMRMQKLGCNPSVVTFNVIMDM 218
           LA+   M++ GY P++VT +SL+ G C   R S+A  L  +M ++G  P  +TF  ++  
Sbjct: 146 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 205

Query: 219 LCKNGKVLEAKELLKVMIQSGNVPSLFTYNSLMYGFCLVGDLKSAMELFGSMKSNGCEPD 278
           L  + K  EA  L+  M+Q G  P+L TY  ++ G C  GD   A+ L   M++   E D
Sbjct: 206 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 265

Query: 279 ATTYGTLLKGHFQTGNTKLALKLHEELLNGTGQYADSCKAMEMFEEMKAQGVLPDVISYN 338
              + T                    +++   +Y     A+ +F+EM+ +G+ P+V++Y+
Sbjct: 266 VVIFNT--------------------IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 325

Query: 339 SLIHGFCNGGKWEEAKLLFNEMVDQGVRLNVATFNVIMDMHCKKGKVIEAKKLWEVMIQR 398
           SLI   C+ G+W +A  L ++M+++ +  N+ TFN ++D   K+GK +EA+KL++ MI+R
Sbjct: 326 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 385

Query: 399 GNVPDLFSYNILMDGFCLVGDLKSAKKLFVSMTSKGCEPNVISYGVLINGYCKNLKVEEA 458
              PD+F+YN L++GFC+   L  AK++F  M SK C P+V++Y  LI G+CK+ +VE+ 
Sbjct: 386 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 445

Query: 459 MNLYNEMLQVGVRPNVITYNALLTGLFLAGKVDDARKIFCVIQDNGVALSSCTVCIVLDG 518
             L+ EM   G+  + +TY  L+ GLF  G  D+A+K+F  +  +GV     T  I+LDG
Sbjct: 446 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 505

Query: 519 LCKNDYLLEALKLFNEL---SYKSNIDILNCVINGLCKAGKLETAWEVFNKLSHNGFLPN 578
           LC N  L +AL++F+ +     K +I I   +I G+CKAGK++  W++F  LS  G  PN
Sbjct: 506 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 550

Query: 579 VVTYSTIIQGV 584
           VVTY+T+I G+
Sbjct: 566 VVTYNTMISGL 550

The following BLAST results are available for this feature:

BLAST of Sed0014077 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022992036.1	7.4e-178	56.77	pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita maxima]	[more]
KAG7014482.1	2.8e-177	56.84	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_023548637.1	2.8e-177	56.68	pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita pepo subsp...	[more]
KAG6575949.1	2.8e-177	56.84	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG6575955.1	2.8e-177	56.84	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]

BLAST of Sed0014077 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQ14	9.0e-94	37.85	Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop...	[more]
Q9LQ16	1.3e-92	35.69	Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX...	[more]
Q9CAN0	1.9e-91	35.83	Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop...	[more]
Q9C8T7	6.0e-90	35.35	Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX...	[more]
Q9SXD8	1.0e-89	33.94	Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX...	[more]

BLAST of Sed0014077 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JSG4	3.6e-178	56.77	pentatricopeptide repeat-containing protein At1g63330-like OS=Cucurbita maxima O...	[more]
A0A6J1GP31	4.4e-176	56.94	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS...	[more]
A0A6J1DSW3	1.2e-173	56.41	pentatricopeptide repeat-containing protein At1g63330-like OS=Momordica charanti...	[more]
A0A1S4DYL6	3.1e-153	54.48	pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cuc...	[more]
A0A5D3C8J0	2.6e-152	54.30	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Sed0014077 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62930.1	6.4e-95	37.85	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G62910.1	9.2e-94	35.69	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G63130.1	1.3e-92	35.83	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G63330.1	4.3e-91	35.35	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G62590.1	7.3e-91	33.94	pentatricopeptide (PPR) repeat-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 508..532 e-value: 0.0037 score: 17.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 435..481 e-value: 2.0E-15 score: 56.7 coord: 329..378 e-value: 8.3E-16 score: 57.9 coord: 239..286 e-value: 1.0E-13 score: 51.2 coord: 538..583 e-value: 1.7E-13 score: 50.5 coord: 169..218 e-value: 2.0E-18 score: 66.4 coord: 102..147 e-value: 1.7E-7 score: 31.3
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 398..427 e-value: 9.1E-9 score: 34.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 207..240 e-value: 2.9E-7 score: 28.2 coord: 172..205 e-value: 2.0E-9 score: 35.0 coord: 437..471 e-value: 1.5E-8 score: 32.3 coord: 541..573 e-value: 8.1E-9 score: 33.1 coord: 472..504 e-value: 2.2E-5 score: 22.3 coord: 332..365 e-value: 1.7E-10 score: 38.4 coord: 402..436 e-value: 3.0E-9 score: 34.5 coord: 368..400 e-value: 7.0E-7 score: 27.0 coord: 137..171 e-value: 0.0017 score: 16.4 coord: 242..276 e-value: 1.4E-10 score: 38.7 coord: 103..135 e-value: 1.7E-4 score: 19.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 365..399 score: 11.8273
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 330..364 score: 13.723605
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 170..204 score: 13.515341
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 470..504 score: 10.413293
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 135..169 score: 9.262356
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 240..274 score: 12.978237
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 435..469 score: 13.076888
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 537..571 score: 11.695765
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 205..239 score: 11.958836
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 400..434 score: 12.660359
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 100..134 score: 9.503505
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 428..492 e-value: 3.2E-22 score: 81.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 188..309 e-value: 7.7E-36 score: 126.1 coord: 310..427 e-value: 8.8E-37 score: 129.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 493..588 e-value: 7.6E-19 score: 70.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 35..187 e-value: 1.1E-21 score: 79.0
None	No IPR available	PANTHER	PTHR47934:SF11	OS07G0300200 PROTEIN	coord: 303..583
None	No IPR available	PANTHER	PTHR47934	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL	coord: 303..583
None	No IPR available	PANTHER	PTHR47934:SF11	OS07G0300200 PROTEIN	coord: 86..481
None	No IPR available	PANTHER	PTHR47934	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL	coord: 86..481
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 216..472

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0014077.1	Sed0014077.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding