Lag0005395 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0005395
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionIntegrase catalytic domain-containing protein
Locationchr6: 16355746 .. 16356722 (+)
RNA-Seq ExpressionLag0005395
SyntenyLag0005395
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCAACCACCACCACCACACCTTTTGTCAATCCTCTCAGTATTGTTTTAACAGTAAAATTAGATGAGAGAAACTACTTACTTTGGAGATCCATGGTCCTTGTTGTTTTACGAGGACAGAAACTAGATGGCTATGTGTTGGGTACAGTTGCCCAACCATCAGAACTTATCCAAAGCTCTGGAATTGAAAATGTTGGTTCCATCGCAAATCCAGCCTATGAAACATGGATGTCCACAGATCAGTCACTCTTGGCTTGGTTGTATGGATCCATGTTACCTACCATTGCCTGTGATATTTTAAATCACAAAACATCTCGAGAGGTATGGAAGGCGCTGGAAAACCTCTATGGAGTGGTGGACAAGGCACGCATTACCCAACTCCAACGCAATCTCCAAACAACCCGAAAAAATCAGCAGAAGATGAGTGACTACCTATCTTCAATGAAGCAGATCGCAGATGGACTGCCCCTTGCTAGTGAACCCGTAAGTGAAAGTTCACTAATAACAAGCACACTTATGGGTCTAGATGTTGAATACATACCGGTAGCATGCCAGATAAATGCCAAAGAATCAATCACTTGGCAAGAAGTTTATTCAACACTCATCAAGTAAGTGCAAATCTGGATTTGTCTAATGCTTTAGCTAACTATGTTTCTACCAAAAATTTCAGTCAAGAGACTAGATCACAGAACCATGGGTATGACCAAAGTAGAAGCCAACGAAACAATGGTAGAGGTAGAGGTAGAGGTGGAAGAAATTTCTACCCAAGAGGAAACTCAAAGCCCACATGTGAAGTGTGCGGAAAGATGGGGCACACTGTTGAAAAATGTTATCATCGACTCAATATGCGCTACATGGGAAGCGCACCCAAAGAAGGTGAACACTCTGCAGCTGCTTACATTGCAACCCCAGACATAATAAATGACCCAAGTTGGCTACTAGACAGTGGTGCCATTGTTGGGTTCCCAGAGTGA

mRNA sequence

ATGAAAGCAACCACCACCACCACACCTTTTGTCAATCCTCTCAGTATTGTTTTAACAGTAAAATTAGATGAGAGAAACTACTTACTTTGGAGATCCATGGTCCTTGTTGTTTTACGAGGACAGAAACTAGATGGCTATGTGTTGGGTACAGTTGCCCAACCATCAGAACTTATCCAAAGCTCTGGAATTGAAAATGTTGGTTCCATCGCAAATCCAGCCTATGAAACATGGATGTCCACAGATCAGTCACTCTTGGCTTGGTTGTATGGATCCATGTTACCTACCATTGCCTGTGATATTTTAAATCACAAAACATCTCGAGAGGTATGGAAGGCGCTGGAAAACCTCTATGGAGTGGTGGACAAGGCACGCATTACCCAACTCCAACGCAATCTCCAAACAACCCGAAAAAATCAGCAGAAGATGAGTGACTACCTATCTTCAATGAAGCAGATCGCAGATGGACTGCCCCTTGCTAGTGAACCCGTAAGTGAAAGTTCACTAATAACAAGCACACTTATGGGTCTAGATGTTGAATACATACCGGTAGCATGCCAGATAAATGCCAAAGAATCAATCACTTGGCAAGAAGTTTATTCAACACTCATCAATCAAGAGACTAGATCACAGAACCATGGGTATGACCAAAGTAGAAGCCAACGAAACAATGGTAGAGGTAGAGGTAGAGGTGGAAGAAATTTCTACCCAAGAGGAAACTCAAAGCCCACATGTGAAGTGTGCGGAAAGATGGGGCACACTGTTGAAAAATGTTATCATCGACTCAATATGCGCTACATGGGAAGCGCACCCAAAGAAGGTGAACACTCTGCAGCTGCTTACATTGCAACCCCAGACATAATAAATGACCCAAGTTGGCTACTAGACAGTGGTGCCATTGTTGGGTTCCCAGAGTGA

Coding sequence (CDS)

ATGAAAGCAACCACCACCACCACACCTTTTGTCAATCCTCTCAGTATTGTTTTAACAGTAAAATTAGATGAGAGAAACTACTTACTTTGGAGATCCATGGTCCTTGTTGTTTTACGAGGACAGAAACTAGATGGCTATGTGTTGGGTACAGTTGCCCAACCATCAGAACTTATCCAAAGCTCTGGAATTGAAAATGTTGGTTCCATCGCAAATCCAGCCTATGAAACATGGATGTCCACAGATCAGTCACTCTTGGCTTGGTTGTATGGATCCATGTTACCTACCATTGCCTGTGATATTTTAAATCACAAAACATCTCGAGAGGTATGGAAGGCGCTGGAAAACCTCTATGGAGTGGTGGACAAGGCACGCATTACCCAACTCCAACGCAATCTCCAAACAACCCGAAAAAATCAGCAGAAGATGAGTGACTACCTATCTTCAATGAAGCAGATCGCAGATGGACTGCCCCTTGCTAGTGAACCCGTAAGTGAAAGTTCACTAATAACAAGCACACTTATGGGTCTAGATGTTGAATACATACCGGTAGCATGCCAGATAAATGCCAAAGAATCAATCACTTGGCAAGAAGTTTATTCAACACTCATCAATCAAGAGACTAGATCACAGAACCATGGGTATGACCAAAGTAGAAGCCAACGAAACAATGGTAGAGGTAGAGGTAGAGGTGGAAGAAATTTCTACCCAAGAGGAAACTCAAAGCCCACATGTGAAGTGTGCGGAAAGATGGGGCACACTGTTGAAAAATGTTATCATCGACTCAATATGCGCTACATGGGAAGCGCACCCAAAGAAGGTGAACACTCTGCAGCTGCTTACATTGCAACCCCAGACATAATAAATGACCCAAGTTGGCTACTAGACAGTGGTGCCATTGTTGGGTTCCCAGAGTGA

Protein sequence

MKATTTTTPFVNPLSIVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQSSGIENVGSIANPAYETWMSTDQSLLAWLYGSMLPTIACDILNHKTSREVWKALENLYGVVDKARITQLQRNLQTTRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITSTLMGLDVEYIPVACQINAKESITWQEVYSTLINQETRSQNHGYDQSRSQRNNGRGRGRGGRNFYPRGNSKPTCEVCGKMGHTVEKCYHRLNMRYMGSAPKEGEHSAAAYIATPDIINDPSWLLDSGAIVGFPE
Homology
BLAST of Lag0005395 vs. NCBI nr
Match: XP_022157748.1 (uncharacterized protein LOC111024384 isoform X1 [Momordica charantia])

HSP 1 Score: 273.1 bits (697), Expect = 2.9e-69
Identity = 147/335 (43.88%), Postives = 198/335 (59.10%), Query Frame = 0

Query: 8   TPFVNPLSIVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQSSGIENVG 67
           T F +PL  VLTVKLD++NY LWR MVL VLRGQK DGYVLGT+A+P + + S   E   
Sbjct: 32  TSFGHPLGTVLTVKLDDKNYSLWRGMVLAVLRGQKFDGYVLGTLAKPPQFLVSPETEGTS 91

Query: 68  S--IANPAYETWMSTDQSLLAWLYGSMLPTIACDILNHKTSREVWKALENLYGVVDKARI 127
                NP Y  W + DQ+LL WL+GSM P+IACD+++ ++SREVWKALE+LYG   KARI
Sbjct: 92  DHLQVNPEYVEWQAVDQALLGWLFGSMTPSIACDVVDFRSSREVWKALEDLYGATSKARI 151

Query: 128 TQLQRNLQTTRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITSTLMGLDVEYIPVAC 187
            QL+  LQ T+KN  KMS+YL  MKQ ++ L LA EPV+ + L++  L GL+ EY+P+ C
Sbjct: 152 NQLRNVLQNTKKNSLKMSEYLGLMKQASESLKLAGEPVAFNYLMSCVLSGLEAEYLPIVC 211

Query: 188 QINAKESITWQEVYSTLI------------------------------------------ 247
           QI  K+S +WQE+++TL+                                          
Sbjct: 212 QIEGKDSTSWQELFATLVTFENTLMRLNIVSTATAEGISDGSXNYVHSKQNSVGNRQFHQ 271

Query: 248 NQETRSQNHGYDQSRSQRNNGRGRGRGGRNFYPRGNSKPTCEVCGKMGHTVEKCYHRLNM 299
           +Q  + Q  G   S   +NN RGRGRG  + Y   NSKP+C++CGK GH    CY R + 
Sbjct: 272 SQSGQGQGRGSYNSNDAKNNVRGRGRGRFSPYRGNNSKPSCQLCGKYGHIAAVCYKRFDE 331

BLAST of Lag0005395 vs. NCBI nr
Match: XP_022157750.1 (uncharacterized protein LOC111024384 isoform X2 [Momordica charantia])

HSP 1 Score: 273.1 bits (697), Expect = 2.9e-69
Identity = 147/335 (43.88%), Postives = 198/335 (59.10%), Query Frame = 0

Query: 8   TPFVNPLSIVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQSSGIENVG 67
           T F +PL  VLTVKLD++NY LWR MVL VLRGQK DGYVLGT+A+P + + S   E   
Sbjct: 32  TSFGHPLGTVLTVKLDDKNYSLWRGMVLAVLRGQKFDGYVLGTLAKPPQFLVSPETEGTS 91

Query: 68  S--IANPAYETWMSTDQSLLAWLYGSMLPTIACDILNHKTSREVWKALENLYGVVDKARI 127
                NP Y  W + DQ+LL WL+GSM P+IACD+++ ++SREVWKALE+LYG   KARI
Sbjct: 92  DHLQVNPEYVEWQAVDQALLGWLFGSMTPSIACDVVDFRSSREVWKALEDLYGATSKARI 151

Query: 128 TQLQRNLQTTRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITSTLMGLDVEYIPVAC 187
            QL+  LQ T+KN  KMS+YL  MKQ ++ L LA EPV+ + L++  L GL+ EY+P+ C
Sbjct: 152 NQLRNVLQNTKKNSLKMSEYLGLMKQASESLKLAGEPVAFNYLMSCVLSGLEAEYLPIVC 211

Query: 188 QINAKESITWQEVYSTLI------------------------------------------ 247
           QI  K+S +WQE+++TL+                                          
Sbjct: 212 QIEGKDSTSWQELFATLVTFENTLMRLNIVSTATAEGISDGSXNYVHSKQNSVGNRQFHQ 271

Query: 248 NQETRSQNHGYDQSRSQRNNGRGRGRGGRNFYPRGNSKPTCEVCGKMGHTVEKCYHRLNM 299
           +Q  + Q  G   S   +NN RGRGRG  + Y   NSKP+C++CGK GH    CY R + 
Sbjct: 272 SQSGQGQGRGSYNSNDAKNNVRGRGRGRFSPYRGNNSKPSCQLCGKYGHIAAVCYKRFDE 331

BLAST of Lag0005395 vs. NCBI nr
Match: XP_022142770.1 (uncharacterized protein LOC111012809 [Momordica charantia])

HSP 1 Score: 231.9 bits (590), Expect = 7.5e-57
Identity = 127/236 (53.81%), Postives = 158/236 (66.95%), Query Frame = 0

Query: 92  MLPTIACDILNHKTSREVWKALENLYGVVDKARITQLQRNLQTTRKNQQKMSDYLSSMKQ 151
           M P IACD+L+  TSR+VWKALE+LY   +KARI QL+ +LQTTRKNQ KMSDYLS+MKQ
Sbjct: 1   MSPIIACDVLSMATSRDVWKALEDLYETANKARINQLKTSLQTTRKNQLKMSDYLSTMKQ 60

Query: 152 IADGLPLASEPVSESSLITSTLMGLDVEYIPVACQINAKESITWQEVYSTLINQE----- 211
           +AD L LA EP+S SSL++S L GL+ EY+ + CQINAKE+I+WQEV++TLI  E     
Sbjct: 61  LADCLTLAGEPISTSSLLSSVLTGLNAEYLQIICQINAKENISWQEVHATLITFENILIH 120

Query: 212 --------------------TRSQN---HGYDQSRSQRNNGRGRGRGGRNFYPRGN-SKP 271
                               + SQN   H   Q R Q  N RGR RGGR    R N S+P
Sbjct: 121 LNNVSIADVSGPSANYTYNKSVSQNWNPHQQGQGRGQGRNSRGRNRGGRFQGQRSNSSRP 180

Query: 272 TCEVCGKMGHTVEKCYHRLNMRYMGSAPKEGEHSAAAYIATPDIINDPSWLLDSGA 299
           TC+VCGK+GH    CYHRLNM+YMG+ P+ G  +  AYI  P++I DP+WL+DSGA
Sbjct: 181 TCQVCGKIGHLAVVCYHRLNMQYMGNTPQGGNQAPNAYITGPEVIIDPNWLIDSGA 236

BLAST of Lag0005395 vs. NCBI nr
Match: TXG55646.1 (hypothetical protein EZV62_020902 [Acer yangbiense])

HSP 1 Score: 226.1 bits (575), Expect = 4.1e-55
Identity = 123/344 (35.76%), Postives = 186/344 (54.07%), Query Frame = 0

Query: 3   ATTTTTPFVNPLSIVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQS-- 62
           ++  ++PF N L+    +KLD +N++LW++MV  +++G +LDG++  T   P E + S  
Sbjct: 30  SSNESSPFGNKLNQSFAIKLDRQNFILWKTMVTTIIKGHRLDGHLYSTRPCPPEFLPSPT 89

Query: 63  -SGIENVGSIANPAYETWMSTDQSLLAWLYGSMLPTIACDILNHKTSREVWKALENLYGV 122
             G+ + GS +NP YE W+  DQ L+ WLY SM   +A  ++   T+  +WKALENL+G 
Sbjct: 90  TPGVSDSGSCSNPEYEKWLVNDQLLMGWLYSSMTENVALSVMGSTTAAGLWKALENLFGA 149

Query: 123 VDKARITQLQRNLQTTRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITSTLMGLDVE 182
             K++   ++ ++QTTRK    M +YL+ MK  AD L +A +P  E+ L  + L GLD E
Sbjct: 150 YSKSKANTIRTSIQTTRKGSSTMEEYLTQMKTWADSLAIAGDPYPENLLFANILAGLDSE 209

Query: 183 YIPVACQINAKESITWQEVYSTLI------------------------------------ 242
           Y+P+   I A+E  TWQE+Y TL+                                    
Sbjct: 210 YMPIVVLIEAREHFTWQEIYDTLLSYDSKLEHINNVSAKGNLLSSPSAHLATNKPNNTPN 269

Query: 243 -----NQETRSQ--NHGYDQSRSQRNNGRGRGRGGRNFYPRGNSKPTCEVCGKMGHTVEK 299
                NQ+  +Q  N   ++   +   GR RGRGGRN     NS+PTC+VCGK GH+   
Sbjct: 270 TNKTSNQQNLNQGGNRAPNRGGFRGGGGRFRGRGGRN----NNSRPTCQVCGKFGHSASV 329

BLAST of Lag0005395 vs. NCBI nr
Match: TXG67243.1 (hypothetical protein EZV62_008518 [Acer yangbiense])

HSP 1 Score: 223.8 bits (569), Expect = 2.0e-54
Identity = 123/352 (34.94%), Postives = 187/352 (53.12%), Query Frame = 0

Query: 3   ATTTTTPFVNPLSIVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQS-- 62
           ++  ++PF N L+    +KLD +N++LW++MV  +++G +LDG++  T   P E + S  
Sbjct: 30  SSNESSPFGNKLNQSFAIKLDRQNFILWKTMVTTIIKGHRLDGHLYSTRPCPPEFLPSPT 89

Query: 63  ---------SGIENVGSIANPAYETWMSTDQSLLAWLYGSMLPTIACDILNHKTSREVWK 122
                     G+ + GS +NP YE W+  DQ L+ WLY SM   +A  ++   T+  +WK
Sbjct: 90  TPGVPSPTTPGVSDSGSCSNPEYEKWLVNDQLLMGWLYSSMTENVALSVMGSTTAAGLWK 149

Query: 123 ALENLYGVVDKARITQLQRNLQTTRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITS 182
           ALENL+G   K++   ++ ++QTTRK    M +YL+ MK  AD L +A +P  E+ L  +
Sbjct: 150 ALENLFGAYSKSKANTIRTSIQTTRKGSSTMEEYLTQMKTWADSLAIAGDPYPENLLFAN 209

Query: 183 TLMGLDVEYIPVACQINAKESITWQEVYSTLI---------------------------- 242
           +L GLD EY+P+   I A+E  TWQE+Y TL+                            
Sbjct: 210 SLAGLDSEYMPIVVLIEAREHFTWQEIYDTLLSYDSKLEHINNVSAKGNLLSSPSAHLAT 269

Query: 243 -------------NQETRSQ--NHGYDQSRSQRNNGRGRGRGGRNFYPRGNSKPTCEVCG 299
                        NQ+  +Q  N   ++   +   GR RGRGGRN     NS+PTC+VCG
Sbjct: 270 NKPNNTPNTNKTSNQQNLNQGGNRAPNRGGFRGGGGRFRGRGGRN----NNSRPTCQVCG 329

BLAST of Lag0005395 vs. ExPASy TrEMBL
Match: A0A6J1DU77 (uncharacterized protein LOC111024384 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024384 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 1.4e-69
Identity = 147/335 (43.88%), Postives = 198/335 (59.10%), Query Frame = 0

Query: 8   TPFVNPLSIVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQSSGIENVG 67
           T F +PL  VLTVKLD++NY LWR MVL VLRGQK DGYVLGT+A+P + + S   E   
Sbjct: 32  TSFGHPLGTVLTVKLDDKNYSLWRGMVLAVLRGQKFDGYVLGTLAKPPQFLVSPETEGTS 91

Query: 68  S--IANPAYETWMSTDQSLLAWLYGSMLPTIACDILNHKTSREVWKALENLYGVVDKARI 127
                NP Y  W + DQ+LL WL+GSM P+IACD+++ ++SREVWKALE+LYG   KARI
Sbjct: 92  DHLQVNPEYVEWQAVDQALLGWLFGSMTPSIACDVVDFRSSREVWKALEDLYGATSKARI 151

Query: 128 TQLQRNLQTTRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITSTLMGLDVEYIPVAC 187
            QL+  LQ T+KN  KMS+YL  MKQ ++ L LA EPV+ + L++  L GL+ EY+P+ C
Sbjct: 152 NQLRNVLQNTKKNSLKMSEYLGLMKQASESLKLAGEPVAFNYLMSCVLSGLEAEYLPIVC 211

Query: 188 QINAKESITWQEVYSTLI------------------------------------------ 247
           QI  K+S +WQE+++TL+                                          
Sbjct: 212 QIEGKDSTSWQELFATLVTFENTLMRLNIVSTATAEGISDGSXNYVHSKQNSVGNRQFHQ 271

Query: 248 NQETRSQNHGYDQSRSQRNNGRGRGRGGRNFYPRGNSKPTCEVCGKMGHTVEKCYHRLNM 299
           +Q  + Q  G   S   +NN RGRGRG  + Y   NSKP+C++CGK GH    CY R + 
Sbjct: 272 SQSGQGQGRGSYNSNDAKNNVRGRGRGRFSPYRGNNSKPSCQLCGKYGHIAAVCYKRFDE 331

BLAST of Lag0005395 vs. ExPASy TrEMBL
Match: A0A6J1DTZ7 (uncharacterized protein LOC111024384 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024384 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 1.4e-69
Identity = 147/335 (43.88%), Postives = 198/335 (59.10%), Query Frame = 0

Query: 8   TPFVNPLSIVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQSSGIENVG 67
           T F +PL  VLTVKLD++NY LWR MVL VLRGQK DGYVLGT+A+P + + S   E   
Sbjct: 32  TSFGHPLGTVLTVKLDDKNYSLWRGMVLAVLRGQKFDGYVLGTLAKPPQFLVSPETEGTS 91

Query: 68  S--IANPAYETWMSTDQSLLAWLYGSMLPTIACDILNHKTSREVWKALENLYGVVDKARI 127
                NP Y  W + DQ+LL WL+GSM P+IACD+++ ++SREVWKALE+LYG   KARI
Sbjct: 92  DHLQVNPEYVEWQAVDQALLGWLFGSMTPSIACDVVDFRSSREVWKALEDLYGATSKARI 151

Query: 128 TQLQRNLQTTRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITSTLMGLDVEYIPVAC 187
            QL+  LQ T+KN  KMS+YL  MKQ ++ L LA EPV+ + L++  L GL+ EY+P+ C
Sbjct: 152 NQLRNVLQNTKKNSLKMSEYLGLMKQASESLKLAGEPVAFNYLMSCVLSGLEAEYLPIVC 211

Query: 188 QINAKESITWQEVYSTLI------------------------------------------ 247
           QI  K+S +WQE+++TL+                                          
Sbjct: 212 QIEGKDSTSWQELFATLVTFENTLMRLNIVSTATAEGISDGSXNYVHSKQNSVGNRQFHQ 271

Query: 248 NQETRSQNHGYDQSRSQRNNGRGRGRGGRNFYPRGNSKPTCEVCGKMGHTVEKCYHRLNM 299
           +Q  + Q  G   S   +NN RGRGRG  + Y   NSKP+C++CGK GH    CY R + 
Sbjct: 272 SQSGQGQGRGSYNSNDAKNNVRGRGRGRFSPYRGNNSKPSCQLCGKYGHIAAVCYKRFDE 331

BLAST of Lag0005395 vs. ExPASy TrEMBL
Match: A0A6J1CLV9 (uncharacterized protein LOC111012809 OS=Momordica charantia OX=3673 GN=LOC111012809 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 3.6e-57
Identity = 127/236 (53.81%), Postives = 158/236 (66.95%), Query Frame = 0

Query: 92  MLPTIACDILNHKTSREVWKALENLYGVVDKARITQLQRNLQTTRKNQQKMSDYLSSMKQ 151
           M P IACD+L+  TSR+VWKALE+LY   +KARI QL+ +LQTTRKNQ KMSDYLS+MKQ
Sbjct: 1   MSPIIACDVLSMATSRDVWKALEDLYETANKARINQLKTSLQTTRKNQLKMSDYLSTMKQ 60

Query: 152 IADGLPLASEPVSESSLITSTLMGLDVEYIPVACQINAKESITWQEVYSTLINQE----- 211
           +AD L LA EP+S SSL++S L GL+ EY+ + CQINAKE+I+WQEV++TLI  E     
Sbjct: 61  LADCLTLAGEPISTSSLLSSVLTGLNAEYLQIICQINAKENISWQEVHATLITFENILIH 120

Query: 212 --------------------TRSQN---HGYDQSRSQRNNGRGRGRGGRNFYPRGN-SKP 271
                               + SQN   H   Q R Q  N RGR RGGR    R N S+P
Sbjct: 121 LNNVSIADVSGPSANYTYNKSVSQNWNPHQQGQGRGQGRNSRGRNRGGRFQGQRSNSSRP 180

Query: 272 TCEVCGKMGHTVEKCYHRLNMRYMGSAPKEGEHSAAAYIATPDIINDPSWLLDSGA 299
           TC+VCGK+GH    CYHRLNM+YMG+ P+ G  +  AYI  P++I DP+WL+DSGA
Sbjct: 181 TCQVCGKIGHLAVVCYHRLNMQYMGNTPQGGNQAPNAYITGPEVIIDPNWLIDSGA 236

BLAST of Lag0005395 vs. ExPASy TrEMBL
Match: A0A5C7HHE9 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020902 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.0e-55
Identity = 123/344 (35.76%), Postives = 186/344 (54.07%), Query Frame = 0

Query: 3   ATTTTTPFVNPLSIVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQS-- 62
           ++  ++PF N L+    +KLD +N++LW++MV  +++G +LDG++  T   P E + S  
Sbjct: 30  SSNESSPFGNKLNQSFAIKLDRQNFILWKTMVTTIIKGHRLDGHLYSTRPCPPEFLPSPT 89

Query: 63  -SGIENVGSIANPAYETWMSTDQSLLAWLYGSMLPTIACDILNHKTSREVWKALENLYGV 122
             G+ + GS +NP YE W+  DQ L+ WLY SM   +A  ++   T+  +WKALENL+G 
Sbjct: 90  TPGVSDSGSCSNPEYEKWLVNDQLLMGWLYSSMTENVALSVMGSTTAAGLWKALENLFGA 149

Query: 123 VDKARITQLQRNLQTTRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITSTLMGLDVE 182
             K++   ++ ++QTTRK    M +YL+ MK  AD L +A +P  E+ L  + L GLD E
Sbjct: 150 YSKSKANTIRTSIQTTRKGSSTMEEYLTQMKTWADSLAIAGDPYPENLLFANILAGLDSE 209

Query: 183 YIPVACQINAKESITWQEVYSTLI------------------------------------ 242
           Y+P+   I A+E  TWQE+Y TL+                                    
Sbjct: 210 YMPIVVLIEAREHFTWQEIYDTLLSYDSKLEHINNVSAKGNLLSSPSAHLATNKPNNTPN 269

Query: 243 -----NQETRSQ--NHGYDQSRSQRNNGRGRGRGGRNFYPRGNSKPTCEVCGKMGHTVEK 299
                NQ+  +Q  N   ++   +   GR RGRGGRN     NS+PTC+VCGK GH+   
Sbjct: 270 TNKTSNQQNLNQGGNRAPNRGGFRGGGGRFRGRGGRN----NNSRPTCQVCGKFGHSASV 329

BLAST of Lag0005395 vs. ExPASy TrEMBL
Match: A0A5C7ID32 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_008518 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 9.8e-55
Identity = 123/352 (34.94%), Postives = 187/352 (53.12%), Query Frame = 0

Query: 3   ATTTTTPFVNPLSIVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQS-- 62
           ++  ++PF N L+    +KLD +N++LW++MV  +++G +LDG++  T   P E + S  
Sbjct: 30  SSNESSPFGNKLNQSFAIKLDRQNFILWKTMVTTIIKGHRLDGHLYSTRPCPPEFLPSPT 89

Query: 63  ---------SGIENVGSIANPAYETWMSTDQSLLAWLYGSMLPTIACDILNHKTSREVWK 122
                     G+ + GS +NP YE W+  DQ L+ WLY SM   +A  ++   T+  +WK
Sbjct: 90  TPGVPSPTTPGVSDSGSCSNPEYEKWLVNDQLLMGWLYSSMTENVALSVMGSTTAAGLWK 149

Query: 123 ALENLYGVVDKARITQLQRNLQTTRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITS 182
           ALENL+G   K++   ++ ++QTTRK    M +YL+ MK  AD L +A +P  E+ L  +
Sbjct: 150 ALENLFGAYSKSKANTIRTSIQTTRKGSSTMEEYLTQMKTWADSLAIAGDPYPENLLFAN 209

Query: 183 TLMGLDVEYIPVACQINAKESITWQEVYSTLI---------------------------- 242
           +L GLD EY+P+   I A+E  TWQE+Y TL+                            
Sbjct: 210 SLAGLDSEYMPIVVLIEAREHFTWQEIYDTLLSYDSKLEHINNVSAKGNLLSSPSAHLAT 269

Query: 243 -------------NQETRSQ--NHGYDQSRSQRNNGRGRGRGGRNFYPRGNSKPTCEVCG 299
                        NQ+  +Q  N   ++   +   GR RGRGGRN     NS+PTC+VCG
Sbjct: 270 NKPNNTPNTNKTSNQQNLNQGGNRAPNRGGFRGGGGRFRGRGGRN----NNSRPTCQVCG 329

BLAST of Lag0005395 vs. TAIR 10
Match: AT5G48050.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 8.9e-08
Identity = 57/252 (22.62%), Postives = 107/252 (42.46%), Query Frame = 0

Query: 16  IVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQSSGIENVGSIANPAYE 75
           I +T+ L++ NY +WR +   +     + G++ G+ + P+ + +               +
Sbjct: 22  IFVTLDLNKLNYDVWRELFETLCLSFGVLGHIDGS-STPTPMTE---------------K 81

Query: 76  TWMSTDQSLLAWLYGSMLPTIACDILN-HKTSREVWKALENLYGVVDKARITQLQRNLQT 135
            W   D  +  W+YG++  ++   I+    T+R++W +LENL+    +AR  Q +  L+T
Sbjct: 82  RWKERDGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRT 141

Query: 136 TRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITSTLMGLDVEYIPVACQINAKESI- 195
           T  +   + +Y   +K ++D L     P+S+  L+   L GL  +Y  +   I  K    
Sbjct: 142 TTIDDLSVHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFP 201

Query: 196 TWQEVYSTLINQETRSQNHG-------------------------YDQSRSQRNNGRGRG 241
           ++ E  S L+ +E+R  N                           Y Q     N+  GRG
Sbjct: 202 SFTEARSMLLMEESRLSNKSKSSLSHTNHPSLSNVLFTVPRQQERYPQEYHNNNSNMGRG 257

BLAST of Lag0005395 vs. TAIR 10
Match: AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 3.7e-06
Identity = 58/251 (23.11%), Postives = 100/251 (39.84%), Query Frame = 0

Query: 16  IVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQSSGIENVGSIANPAYE 75
           I + + ++E NY  WR + L       + G++ GT+                   N    
Sbjct: 20  IPVMLDIEESNYDAWRELFLTHCLSFDVMGHIDGTLLP----------------TNANDV 79

Query: 76  TWMSTDQSLLAWLYGSMLP-TIACDILNHKTSREVWKALENLYGVVDKARITQLQRNLQT 135
            W   D  +   LYG++ P       +   TSR++W  ++N +     AR  +L   L+T
Sbjct: 80  NWQKRDGIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRLDSELRT 139

Query: 136 TRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITSTLMGLDVEYIPVACQINAKESIT 195
                 +++DY   MK++AD L     PV++ +L+   L GL+ ++  +   I  ++   
Sbjct: 140 KDIGDMRVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKHRQPFP 199

Query: 196 WQEVYSTLINQE-------TRSQNHGYDQSRS---------------QRNNG-----RGR 239
             +  +T++ +E        +      D S S               QR+ G     RGR
Sbjct: 200 SFDDAATMLQEEEDRLKRAIKPNPTHVDHSSSSTVLACSEAPPVTNFQRSGGNQMGYRGR 254

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022157748.12.9e-6943.88uncharacterized protein LOC111024384 isoform X1 [Momordica charantia][more]
XP_022157750.12.9e-6943.88uncharacterized protein LOC111024384 isoform X2 [Momordica charantia][more]
XP_022142770.17.5e-5753.81uncharacterized protein LOC111012809 [Momordica charantia][more]
TXG55646.14.1e-5535.76hypothetical protein EZV62_020902 [Acer yangbiense][more]
TXG67243.12.0e-5434.94hypothetical protein EZV62_008518 [Acer yangbiense][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU771.4e-6943.88uncharacterized protein LOC111024384 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1DTZ71.4e-6943.88uncharacterized protein LOC111024384 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1CLV93.6e-5753.81uncharacterized protein LOC111012809 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A5C7HHE92.0e-5535.76Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020902 PE=4 SV=1[more]
A0A5C7ID329.8e-5534.94Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_008518 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G48050.18.9e-0822.62CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... [more]
AT1G34070.13.7e-0623.11CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 77..211
e-value: 8.7E-18
score: 64.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..226
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 24..299
NoneNo IPR availablePANTHERPTHR34222:SF48SUBFAMILY NOT NAMEDcoord: 24..299

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0005395.1Lag0005395.1mRNA