Lag0004912 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0004912
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	DUF1985 domain-containing protein
Location	chr6: 8389634 .. 8390807 (+)
RNA-Seq Expression	Lag0004912
Synteny	Lag0004912

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAACTGGGTGGCAGACGTACATCCTGAATGGAAAGACTTGACTATGAAAGTCTTTGAACACAAAAATGTAAGTTATATTATATAGAAAATTACATTAAATAAGAAATATACCCTGGTTTATAATTTTGTTTATTTTTTAATATTTCCAGTTTCAAATATATGAGTTGATTGATGAGGAAGTTCCCGAAAAAAGAACGTCGGGCTCAAAAGAAATTCAGCAGCTAAAAGAGACAGGACGAGAGGATGCATCAACGTCACGCTCAAAAGAAATGGACCCAAATGAGCAAACTAACTTGGAAGACGTTAAGGATATGATTCTTACCAGCTTGGAGGAATTGAATATGAAAATGTCCCAGCTCTTCCGAGAAATTGCTGAAATGAAGAAAATGTTGACGACAAAGCAATCGGGGGAAATTATGTCGACAATAATGAGAATGATGACAATAACGAAAGGGACAACATGGGTGGGAATGGTGGAAAAGGGGCTGGTAATGAAAATAGGACTCAAGAAAATATGAAGGACGACAAAAAGATGGAAAAACTGAGGGTGAAGGAAATGAGAACAACAATAAGGTACATGTAAGCTATATATGAATATCAATCGTTGAATTTTTTTTAAGACTGTATATATGAAATGTCTAAAATGTAGGATAACACGATGGAAGAGGTAGATGAAGATATTGTCACCAGTAGTTTCTTAGTGGAGGTGGAAAAAATTGAGAAGGCTGCAATATCAAATATTCATAAGGTAAGAGGTCCAAATTGTAAACTTTTTTATTGAATCTGTTTTGATTTGTTATGTATTTATTAATTGATGGTCTGGGATGTAGAGAAAAAAGTTCAGACGAGAAGAAAAGAAAATGTGTTCGAGGGGGTATATGTTCATGCTGTAAGTTATGATCTTATTCATTCATCATAAAAACATGATTATATATTAAATAAACTAATGTTTATAATATAATTTTCAATTGCAGATGAAAGGAACGGGACCGTTTGCAGATAGTCAGACTTGTTTGAGGAGGGAACGAAGGAAGATCATACCATCGAAACTAATGAAGTCTCCCTTCACAACAAAGTTTGGGTCTGCGAAAGAAAAGGAACGACCGAACAAAATACTTACAACACAAGATTTCAATGCTCCCAGTTTTAATCTCCTTTCTCAATTGTGA

mRNA sequence

ATGAACAACTGGGTGGCAGACGTACATCCTGAATGGAAAGACTTGACTATGAAAGTCTTTGAACACAAAAATTTTCAAATATATGAGTTGATTGATGAGGAAGTTCCCGAAAAAAGAACGTCGGGCTCAAAAGAAATTCAGCAGCTAAAAGAGACAGGACGAGAGGATGCATCAACGTCACGCTCAAAAGAAATGGACCCAAATGAGCAAACTAACTTGGAAGACGTTAAGGATATGATTCTTACCAGCTTGGAGGAATTGAATATGAAAATGTCCCAGCTCTTCCGAGAAATTGCTGAAATGAAGAAAATGTTGACGACAAAGCAATCGGGGGAAATTATGTCGACAATAATGAGAATGATGACAATAACGAAAGGGACAACATGGGTGGGAATGGTGGAAAAGGGGCTGGATAACACGATGGAAGAGGTAGATGAAGATATTGTCACCAGTAGTTTCTTAGTGGAGGTGGAAAAAATTGAGAAGGCTGCAATATCAAATATTCATAAGATGAAAGGAACGGGACCGTTTGCAGATAGTCAGACTTGTTTGAGGAGGGAACGAAGGAAGATCATACCATCGAAACTAATGAAGTCTCCCTTCACAACAAAGTTTGGGTCTGCGAAAGAAAAGGAACGACCGAACAAAATACTTACAACACAAGATTTCAATGCTCCCAGTTTTAATCTCCTTTCTCAATTGTGA

Coding sequence (CDS)

ATGAACAACTGGGTGGCAGACGTACATCCTGAATGGAAAGACTTGACTATGAAAGTCTTTGAACACAAAAATTTTCAAATATATGAGTTGATTGATGAGGAAGTTCCCGAAAAAAGAACGTCGGGCTCAAAAGAAATTCAGCAGCTAAAAGAGACAGGACGAGAGGATGCATCAACGTCACGCTCAAAAGAAATGGACCCAAATGAGCAAACTAACTTGGAAGACGTTAAGGATATGATTCTTACCAGCTTGGAGGAATTGAATATGAAAATGTCCCAGCTCTTCCGAGAAATTGCTGAAATGAAGAAAATGTTGACGACAAAGCAATCGGGGGAAATTATGTCGACAATAATGAGAATGATGACAATAACGAAAGGGACAACATGGGTGGGAATGGTGGAAAAGGGGCTGGATAACACGATGGAAGAGGTAGATGAAGATATTGTCACCAGTAGTTTCTTAGTGGAGGTGGAAAAAATTGAGAAGGCTGCAATATCAAATATTCATAAGATGAAAGGAACGGGACCGTTTGCAGATAGTCAGACTTGTTTGAGGAGGGAACGAAGGAAGATCATACCATCGAAACTAATGAAGTCTCCCTTCACAACAAAGTTTGGGTCTGCGAAAGAAAAGGAACGACCGAACAAAATACTTACAACACAAGATTTCAATGCTCCCAGTTTTAATCTCCTTTCTCAATTGTGA

Protein sequence

MNNWVADVHPEWKDLTMKVFEHKNFQIYELIDEEVPEKRTSGSKEIQQLKETGREDASTSRSKEMDPNEQTNLEDVKDMILTSLEELNMKMSQLFREIAEMKKMLTTKQSGEIMSTIMRMMTITKGTTWVGMVEKGLDNTMEEVDEDIVTSSFLVEVEKIEKAAISNIHKMKGTGPFADSQTCLRRERRKIIPSKLMKSPFTTKFGSAKEKERPNKILTTQDFNAPSFNLLSQL

Homology

[Close]

BLAST of Lag0004912 vs. NCBI nr
Match: TYK22552.1 (uncharacterized protein E5676_scaffold584G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 60.1 bits (144), Expect = 3.0e-05
Identity = 64/227 (28.19%), Postives = 101/227 (44.49%), Query Frame = 0


Query: 4   WVADVHPEWKDLTMKVFEHKNFQIYELIDEEVPEKRTSGSKEIQQLKETGREDASTSRSK 63
           WV D HPEWK+L   VF++  FQ   +   +  E+      E++       E    SR  
Sbjct: 196 WVVDSHPEWKELAEMVFDNYQFQYQVMFQNDFVERSMFHETEMRDETHVTFERGECSRQP 255

Query: 64  EMDPNEQTNLEDVK--DMILTSLEELNMKMSQLFREIAEMKKMLTTKQSGEIMSTIMRMM 123
           E  PNE+     +K  ++I+ + E LN K+  L +E AE  K +   +  EI+     + 
Sbjct: 256 E-PPNEKIAYYFLKFQELIMANNECLNQKLDNLIKE-AECLKNIFKDKVTEIVENNENIQ 315

Query: 124 TITKGTTWVGMVEKGLDNTMEEVDEDIVT---------------SSFLVEVEKIEKAAIS 183
                    G  +   +N   EVD D+ T               ++ L E++KIEK AI 
Sbjct: 316 KDDNNDGGEG--DTNNENVDNEVDRDVTTQQGGQNDLLDDVVYNTALLNEIDKIEKKAI- 375

Query: 184 NIHKMKGTGPFADSQTCLRRERRKIIPSKLMKSPFTTKFGSAKEKER 214
              KMK     A  Q   +  RR  +PS++++SP+TTK     ++ +
Sbjct: 376 ---KMK-----AYQQVVRKSMRRGNLPSRILRSPYTTKLTLQSQRRK 409

[Close]

BLAST of Lag0004912 vs. NCBI nr
Match: KAA0065453.1 (uncharacterized protein E6C27_scaffold17G001390 [Cucumis melo var. makuwa])

HSP 1 Score: 59.7 bits (143), Expect = 3.9e-05
Identity = 62/236 (26.27%), Postives = 96/236 (40.68%), Query Frame = 0


Query: 1   MNNWVADVHPEWKDLTMKVFEHKNFQIYELIDEEVPEKRTSGSKEIQQLKETGREDASTS 60
           M NWV D HPEWKDL  KVF++  F+   + +E+  E+RT     +++      E   +S
Sbjct: 40  MLNWVVDSHPEWKDLAKKVFDNDQFKFEAMFEEDFVERRTFHEYVMREETNVTFERGESS 99

Query: 61  RSKEMDPNEQTN-LEDVKDMILTSLEELNMKMSQLFREIAEMKKMLTTKQSGEIMSTIMR 120
           R  E    +  +     +++ILT+ E LN K+  L +E+  +K ML  K           
Sbjct: 100 RQGEASNKKIPDYFLKFQELILTNNECLNNKLDLLIKEVESLKDMLKEK----------- 159

Query: 121 MMTITKGTTWVGMVEKGLDNTM--EEVDEDIVTSSFLVEVEKIEKAAISNIHKMKGTGPF 180
                     V  + +  DN    +  DE + TSS                         
Sbjct: 160 ----------VNQIVENNDNIPRDDNNDEGLSTSS------------------------- 219

Query: 181 ADSQTCLRRERRKIIPSKLMKSPFTTKFGSAKEKERPNKILTTQDFNAPSFNLLSQ 234
                  +    +     +++SP+TTK  S K K+   +    Q F AP+F LLSQ
Sbjct: 220 ------QKEHEERDFTFTVLRSPYTTKSDSTKPKKERIE-FNAQGFEAPTFKLLSQ 222

[Close]

BLAST of Lag0004912 vs. NCBI nr
Match: KAA0055493.1 (hypothetical protein E6C27_scaffold221G00720 [Cucumis melo var. makuwa] >TYK08973.1 hypothetical protein E5676_scaffold314G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 2.5e-04
Identity = 39/92 (42.39%), Postives = 48/92 (52.17%), Query Frame = 0


Query: 151 SSFLVEVEKIEKAAISNIHKMKGTGPFADS---------QTCLRRERRKIIPSKLMKSPF 210
           ++ L EV+KIEK AI    K    G    S             R  RR  +PSK+M+S F
Sbjct: 84  TTLLKEVDKIEKEAIKMKEKKMDKGQVRQSVIGKSAPVNWVVRRSMRRGTLPSKIMRSLF 143

Query: 211 TTKFGSAKEKERPNKILTTQDFNAPSFNLLSQ 234
           TTKFGSAK K+   K   ++ F  PSF LLSQ
Sbjct: 144 TTKFGSAKPKKEKVK-FNSEGFQGPSFKLLSQ 174

[Close]

BLAST of Lag0004912 vs. NCBI nr
Match: XP_008464748.1 (PREDICTED: uncharacterized protein LOC103502558 isoform X1 [Cucumis melo])

HSP 1 Score: 56.2 bits (134), Expect = 4.3e-04
Identity = 37/109 (33.94%), Postives = 58/109 (53.21%), Query Frame = 0


Query: 1   MNNWVADVHPEWKDLTMKVFEHKNFQIYELIDEEVPEKRTSGSKEIQQLKETGREDASTS 60
           M NWV D HPEWKDL  KVF++  F+   + +E+  E+RT     +++      E   +S
Sbjct: 65  MLNWVVDSHPEWKDLAKKVFDNDQFKFEAMFEEDFVERRTFHEYVMREETNVTFERGESS 124

Query: 61  RSKEMDPNEQTN-LEDVKDMILTSLEELNMKMSQLFREIAEMKKMLTTK 109
           R  E    +  +     +++ILT+ E LN K+  L +E+  +K ML  K
Sbjct: 125 RQGEASNKKIPDYFLKFQELILTNNECLNNKLDLLIKEVESLKDMLKEK 173

[Close]

BLAST of Lag0004912 vs. NCBI nr
Match: KAA0042894.1 (hypothetical protein E6C27_scaffold44G004110 [Cucumis melo var. makuwa] >TYK05296.1 hypothetical protein E5676_scaffold108G001160 [Cucumis melo var. makuwa])

HSP 1 Score: 55.5 bits (132), Expect = 7.4e-04
Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 0


Query: 144 VDEDIVTSSFLVEVEKIEKAAISNIHK-----------------MKGTGPFADSQTCLRR 203
           +D+ +  ++ L EV+KIEK AI    K                 +   G     Q  +R+
Sbjct: 56  IDDVVYNTAILNEVDKIEKKAIKMKKKKLEKRLAQRLVAVKTATITARGRDIAYQQAVRK 115

Query: 204 E-RRKIIPSKLMKSPFTTKFGSAKEKERPNKILTTQDFNAPSFNLLSQ 234
             RR  +PS+++KS FTTKFGSA+ K++  + L +Q F APSF LLSQ
Sbjct: 116 SMRRGNLPSRILKSSFTTKFGSARPKKKKIQ-LNSQGFEAPSFKLLSQ 162

[Close]

BLAST of Lag0004912 vs. ExPASy TrEMBL
Match: A0A5D3DG30 (DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold584G00070 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.4e-05
Identity = 64/227 (28.19%), Postives = 101/227 (44.49%), Query Frame = 0


Query: 4   WVADVHPEWKDLTMKVFEHKNFQIYELIDEEVPEKRTSGSKEIQQLKETGREDASTSRSK 63
           WV D HPEWK+L   VF++  FQ   +   +  E+      E++       E    SR  
Sbjct: 196 WVVDSHPEWKELAEMVFDNYQFQYQVMFQNDFVERSMFHETEMRDETHVTFERGECSRQP 255

Query: 64  EMDPNEQTNLEDVK--DMILTSLEELNMKMSQLFREIAEMKKMLTTKQSGEIMSTIMRMM 123
           E  PNE+     +K  ++I+ + E LN K+  L +E AE  K +   +  EI+     + 
Sbjct: 256 E-PPNEKIAYYFLKFQELIMANNECLNQKLDNLIKE-AECLKNIFKDKVTEIVENNENIQ 315

Query: 124 TITKGTTWVGMVEKGLDNTMEEVDEDIVT---------------SSFLVEVEKIEKAAIS 183
                    G  +   +N   EVD D+ T               ++ L E++KIEK AI 
Sbjct: 316 KDDNNDGGEG--DTNNENVDNEVDRDVTTQQGGQNDLLDDVVYNTALLNEIDKIEKKAI- 375

Query: 184 NIHKMKGTGPFADSQTCLRRERRKIIPSKLMKSPFTTKFGSAKEKER 214
              KMK     A  Q   +  RR  +PS++++SP+TTK     ++ +
Sbjct: 376 ---KMK-----AYQQVVRKSMRRGNLPSRILRSPYTTKLTLQSQRRK 409

[Close]

BLAST of Lag0004912 vs. ExPASy TrEMBL
Match: A0A5A7VB98 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001390 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.9e-05
Identity = 62/236 (26.27%), Postives = 96/236 (40.68%), Query Frame = 0


Query: 1   MNNWVADVHPEWKDLTMKVFEHKNFQIYELIDEEVPEKRTSGSKEIQQLKETGREDASTS 60
           M NWV D HPEWKDL  KVF++  F+   + +E+  E+RT     +++      E   +S
Sbjct: 40  MLNWVVDSHPEWKDLAKKVFDNDQFKFEAMFEEDFVERRTFHEYVMREETNVTFERGESS 99

Query: 61  RSKEMDPNEQTN-LEDVKDMILTSLEELNMKMSQLFREIAEMKKMLTTKQSGEIMSTIMR 120
           R  E    +  +     +++ILT+ E LN K+  L +E+  +K ML  K           
Sbjct: 100 RQGEASNKKIPDYFLKFQELILTNNECLNNKLDLLIKEVESLKDMLKEK----------- 159

Query: 121 MMTITKGTTWVGMVEKGLDNTM--EEVDEDIVTSSFLVEVEKIEKAAISNIHKMKGTGPF 180
                     V  + +  DN    +  DE + TSS                         
Sbjct: 160 ----------VNQIVENNDNIPRDDNNDEGLSTSS------------------------- 219

Query: 181 ADSQTCLRRERRKIIPSKLMKSPFTTKFGSAKEKERPNKILTTQDFNAPSFNLLSQ 234
                  +    +     +++SP+TTK  S K K+   +    Q F AP+F LLSQ
Sbjct: 220 ------QKEHEERDFTFTVLRSPYTTKSDSTKPKKERIE-FNAQGFEAPTFKLLSQ 222

[Close]

BLAST of Lag0004912 vs. ExPASy TrEMBL
Match: A0A5A7UHT1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00690 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-04
Identity = 39/92 (42.39%), Postives = 48/92 (52.17%), Query Frame = 0


Query: 151 SSFLVEVEKIEKAAISNIHKMKGTGPFADS---------QTCLRRERRKIIPSKLMKSPF 210
           ++ L EV+KIEK AI    K    G    S             R  RR  +PSK+M+S F
Sbjct: 84  TTLLKEVDKIEKEAIKMKEKKMDKGQVRQSVIGKSAPVNWVVRRSMRRGTLPSKIMRSLF 143

Query: 211 TTKFGSAKEKERPNKILTTQDFNAPSFNLLSQ 234
           TTKFGSAK K+   K   ++ F  PSF LLSQ
Sbjct: 144 TTKFGSAKPKKEKVK-FNSEGFQGPSFKLLSQ 174

[Close]

BLAST of Lag0004912 vs. ExPASy TrEMBL
Match: A0A1S3CMB6 (uncharacterized protein LOC103502558 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502558 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-04
Identity = 37/109 (33.94%), Postives = 58/109 (53.21%), Query Frame = 0


Query: 1   MNNWVADVHPEWKDLTMKVFEHKNFQIYELIDEEVPEKRTSGSKEIQQLKETGREDASTS 60
           M NWV D HPEWKDL  KVF++  F+   + +E+  E+RT     +++      E   +S
Sbjct: 65  MLNWVVDSHPEWKDLAKKVFDNDQFKFEAMFEEDFVERRTFHEYVMREETNVTFERGESS 124

Query: 61  RSKEMDPNEQTN-LEDVKDMILTSLEELNMKMSQLFREIAEMKKMLTTK 109
           R  E    +  +     +++ILT+ E LN K+  L +E+  +K ML  K
Sbjct: 125 RQGEASNKKIPDYFLKFQELILTNNECLNNKLDLLIKEVESLKDMLKEK 173

[Close]

BLAST of Lag0004912 vs. ExPASy TrEMBL
Match: A0A5A7THS6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001160 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.6e-04
Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 0


Query: 144 VDEDIVTSSFLVEVEKIEKAAISNIHK-----------------MKGTGPFADSQTCLRR 203
           +D+ +  ++ L EV+KIEK AI    K                 +   G     Q  +R+
Sbjct: 56  IDDVVYNTAILNEVDKIEKKAIKMKKKKLEKRLAQRLVAVKTATITARGRDIAYQQAVRK 115

Query: 204 E-RRKIIPSKLMKSPFTTKFGSAKEKERPNKILTTQDFNAPSFNLLSQ 234
             RR  +PS+++KS FTTKFGSA+ K++  + L +Q F APSF LLSQ
Sbjct: 116 SMRRGNLPSRILKSSFTTKFGSARPKKKKIQ-LNSQGFEAPSFKLLSQ 162

The following BLAST results are available for this feature:

BLAST of Lag0004912 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK22552.1	3.0e-05	28.19	uncharacterized protein E5676_scaffold584G00070 [Cucumis melo var. makuwa]	[more]
KAA0065453.1	3.9e-05	26.27	uncharacterized protein E6C27_scaffold17G001390 [Cucumis melo var. makuwa]	[more]
KAA0055493.1	2.5e-04	42.39	hypothetical protein E6C27_scaffold221G00720 [Cucumis melo var. makuwa] >TYK0897...	[more]
XP_008464748.1	4.3e-04	33.94	PREDICTED: uncharacterized protein LOC103502558 isoform X1 [Cucumis melo]	[more]
KAA0042894.1	7.4e-04	37.04	hypothetical protein E6C27_scaffold44G004110 [Cucumis melo var. makuwa] >TYK0529...	[more]

BLAST of Lag0004912 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0004912 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DG30	1.4e-05	28.19	DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7VB98	1.9e-05	26.27	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UHT1	1.2e-04	42.39	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CMB6	2.1e-04	33.94	uncharacterized protein LOC103502558 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7THS6	3.6e-04	37.04	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lag0004912 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 84..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0004912.1	Lag0004912.1	mRNA