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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGAAAGAAGAAAACCCAGAAGACTAAGCAGATTGCAGTCGCCATAGCTGAAACCTCCACCTCCAAATTACCCGATGATGGCGGCGACGGCCAATCCGTACGGCCCAGGAAGAGAGGCCGACCTCGTAAGATCCTCGATGAACCACAGAACGAACAGGATAGCCAGAAACTGCCTTCGCCGCCGCCGGAAGTTGCAGATAAACCACCGGAGAAGAAGGCGAAAACCACCGGCGATGAGCCGCCGCCGCCGGCGGCTTCCATGGAAGGAGGTTCGACGCGAGAACAAGAACAGGAAGAACGCAAATCGGGAGATGGGTTGAGAAGCAGAGGAAGGCGGAAGAACAAACCCAGAAAAAGTAGCTAA mRNA sequence ATGGGAAAGAAGAAAACCCAGAAGACTAAGCAGATTGCAGTCGCCATAGCTGAAACCTCCACCTCCAAATTACCCGATGATGGCGGCGACGGCCAATCCGTACGGCCCAGGAAGAGAGGCCGACCTCGTAAGATCCTCGATGAACCACAGAACGAACAGGATAGCCAGAAACTGCCTTCGCCGCCGCCGGAAGTTGCAGATAAACCACCGGAGAAGAAGGCGAAAACCACCGGCGATGAGCCGCCGCCGCCGGCGGCTTCCATGGAAGGAGGTTCGACGCGAGAACAAGAACAGGAAGAACGCAAATCGGGAGATGGGTTGAGAAGCAGAGGAAGGCGGAAGAACAAACCCAGAAAAAGTAGCTAA Coding sequence (CDS) ATGGGAAAGAAGAAAACCCAGAAGACTAAGCAGATTGCAGTCGCCATAGCTGAAACCTCCACCTCCAAATTACCCGATGATGGCGGCGACGGCCAATCCGTACGGCCCAGGAAGAGAGGCCGACCTCGTAAGATCCTCGATGAACCACAGAACGAACAGGATAGCCAGAAACTGCCTTCGCCGCCGCCGGAAGTTGCAGATAAACCACCGGAGAAGAAGGCGAAAACCACCGGCGATGAGCCGCCGCCGCCGGCGGCTTCCATGGAAGGAGGTTCGACGCGAGAACAAGAACAGGAAGAACGCAAATCGGGAGATGGGTTGAGAAGCAGAGGAAGGCGGAAGAACAAACCCAGAAAAAGTAGCTAA Protein sequence MGKKKTQKTKQIAVAIAETSTSKLPDDGGDGQSVRPRKRGRPRKILDEPQNEQDSQKLPSPPPEVADKPPEKKAKTTGDEPPPPAASMEGGSTREQEQEERKSGDGLRSRGRRKNKPRKSS
Homology
BLAST of Lag0004374 vs. NCBI nr
Match: KAG7020516.1 (hypothetical protein SDJN02_17201, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 144.8 bits (364), Expect = 4.8e-31 Identity = 92/124 (74.19%), Postives = 101/124 (81.45%), Query Frame = 0 Query: 1 MGKKKTQKTKQIAVAIAETSTSKLPDDG---GDGQSVRPRKRGRPRKILDEPQNEQDSQK 60 MGKKKTQKTKQI+VAIAETSTSKLPDDG G GQSV+PRKRGRPRK+LDEP D +K Sbjct: 1 MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEP---PDDKK 60
Query: 61 LPSPPPEVADKPPEKKAKTTGDEPPPPAASMEGGSTREQEQEERKSGDGLRSRGRRKNKP 120 LP PP +VADKP +KK K+TGDEPP SMEG S ++ E EE KSGDG RSRGRRKNKP Sbjct: 61 LPPPPADVADKPLQKKGKSTGDEPPD---SMEGAS-KQHESEEPKSGDGSRSRGRRKNKP 117
Query: 121 RKSS 122 RKSS Sbjct: 121 RKSS 117
BLAST of Lag0004374 vs. NCBI nr
Match: XP_023002541.1 (uncharacterized protein LOC111496353 [Cucurbita maxima]) HSP 1 Score: 141.4 bits (355), Expect = 5.3e-30 Identity = 91/124 (73.39%), Postives = 100/124 (80.65%), Query Frame = 0 Query: 1 MGKKKTQKTKQIAVAIAETSTSKLPDDG---GDGQSVRPRKRGRPRKILDEPQNEQDSQK 60 MGKKKTQKTKQI+VAIAETSTSKLPDDG G GQS +PRKRGRPRK+LDEP + D + Sbjct: 33 MGKKKTQKTKQISVAIAETSTSKLPDDGGGHGGGQSEQPRKRGRPRKVLDEPPD--DKKL 92
Query: 61 LPSPPPEVADKPPEKKAKTTGDEPPPPAASMEGGSTREQEQEERKSGDGLRSRGRRKNKP 120 LP P +VADKP +KK KTTGDEPP SMEG S ++QE EE KSGDG RSRGRRKNKP Sbjct: 93 LPPPAADVADKPLQKKGKTTGDEPP---ISMEGAS-KQQESEEPKSGDGSRSRGRRKNKP 150
Query: 121 RKSS 122 RKSS Sbjct: 153 RKSS 150
BLAST of Lag0004374 vs. NCBI nr
Match: XP_023537340.1 (uncharacterized protein LOC111798433 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 141.0 bits (354), Expect = 6.9e-30 Identity = 90/124 (72.58%), Postives = 100/124 (80.65%), Query Frame = 0 Query: 1 MGKKKTQKTKQIAVAIAETSTSKLPDDG---GDGQSVRPRKRGRPRKILDEPQNEQDSQK 60 MGKKKTQKTKQI+VAIAE STSKLPDDG G GQSV+PRKRGRPRK+LDEP + D + Sbjct: 1 MGKKKTQKTKQISVAIAEISTSKLPDDGGGHGGGQSVQPRKRGRPRKVLDEPPD--DKKL 60
Query: 61 LPSPPPEVADKPPEKKAKTTGDEPPPPAASMEGGSTREQEQEERKSGDGLRSRGRRKNKP 120 LP PP +VADKP +KK K+TGDEPP SMEG S ++ E EE KSGDG RSRGRRKNKP Sbjct: 61 LPPPPADVADKPLQKKGKSTGDEPP---ISMEGAS-KQHESEEPKSGDGSRSRGRRKNKP 118
Query: 121 RKSS 122 RKSS Sbjct: 121 RKSS 118
BLAST of Lag0004374 vs. NCBI nr
Match: KAA0065239.1 (zinc finger and BTB domain-containing protein 47 [Cucumis melo var. makuwa]) HSP 1 Score: 139.0 bits (349), Expect = 2.6e-29 Identity = 89/125 (71.20%), Postives = 100/125 (80.00%), Query Frame = 0 Query: 1 MGKKKTQKTKQIAVAIAETSTSKLPDDGGDGQSVRPRKRGRPRKILDEPQNEQDSQKLPS 60 MGKKKTQKTK+IAVAIAETSTSKL DD G GQS++PRKRGRPRK+LDE QNEQ+++KLP Sbjct: 1 MGKKKTQKTKEIAVAIAETSTSKLADD-GIGQSIQPRKRGRPRKVLDEQQNEQENKKLPP 60
Query: 61 PP---PEVADKPPEKKAKTTGDEPPPPAASMEGGSTRE-QEQEERKSGDGLRSRGRRKNK 120 PP PEV + PPEKK K T DEPPP GS +E +QEE K+GDG RSRGRRKNK Sbjct: 61 PPPLLPEVEENPPEKKIKATVDEPPP-------GSVKEGSKQEEPKTGDGSRSRGRRKNK 117
Query: 121 PRKSS 122 PRKSS Sbjct: 121 PRKSS 117
BLAST of Lag0004374 vs. NCBI nr
Match: XP_038884964.1 (uncharacterized protein LOC120075548 [Benincasa hispida]) HSP 1 Score: 139.0 bits (349), Expect = 2.6e-29 Identity = 88/121 (72.73%), Postives = 100/121 (82.64%), Query Frame = 0 Query: 1 MGKKKTQKTKQIAVAIAETSTSKLPDDGGDGQSVRPRKRGRPRKILDEPQNEQDSQKLPS 60 MGKKK QKTK+IAVAIAETS SKL DD G GQS++PRKRGRPRK+LDEPQN+Q+++KL Sbjct: 1 MGKKKPQKTKEIAVAIAETSASKLADD-GIGQSIQPRKRGRPRKVLDEPQNKQENKKLLP 60
Query: 61 PPPEVADKPPEKKAKTTGDEPPPPAASMEGGSTREQEQEERKSGDGLRSRGRRKNKPRKS 120 P PEVA+ PPEKKAKTT D+PPP SME GS +Q E K+GDG RSRGRRKNKPRKS Sbjct: 61 PLPEVAENPPEKKAKTTVDQPPP--GSMEEGS----KQGEPKTGDGSRSRGRRKNKPRKS 114
Query: 121 S 122 S Sbjct: 121 S 114
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7020516.1 | 4.8e-31 | 74.19 | hypothetical protein SDJN02_17201, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_023002541.1 | 5.3e-30 | 73.39 | uncharacterized protein LOC111496353 [Cucurbita maxima] | [more] |
XP_023537340.1 | 6.9e-30 | 72.58 | uncharacterized protein LOC111798433 [Cucurbita pepo subsp. pepo] | [more] |
KAA0065239.1 | 2.6e-29 | 71.20 | zinc finger and BTB domain-containing protein 47 [Cucumis melo var. makuwa] | [more] |
XP_038884964.1 | 2.6e-29 | 72.73 | uncharacterized protein LOC120075548 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 93..107 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 30..51 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..121 |
None | No IPR available | PANTHER | PTHR37615 | NUCLEOPORIN NUP159-LIKE | coord: 1..121 |
Relationships
The following mRNA feature(s) are a part of this gene:
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