Lag0036879 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0036879
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionexocyst complex component SEC3A
Locationchr2: 1838485 .. 1841392 (+)
RNA-Seq ExpressionLag0036879
SyntenyLag0036879
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCTGTGCAAGTCCGGGAATCTGGATCGAGCTCAGAATATTCCATAAACTACCCCAGAAAGGTTTATCACCCACTGTTGTTACATACAATACTCTGATTGATGGATATTGTAAGGCTGGTAGAACAATAGAGGCTTTCAAACTCAAGGATAGAATGAGAGAAGGCATTTCTCCCTCTTCTGTTACCTATTCTACCTTGATACATGGGCTTCATAAGCGAGGAGATATTGAACAATCTGTGGGGCTTTTGAATGAAATGATCAAGGCAAGTAAAGACTCAAGTGTAATTGATCCACTTGTGGTTCGAGTTTACGTCAAATGGAGAGACAGGCAGAAGACATCCAAATTGAACTGTTGAACCAAAGTCCAATTTGCCGCGCTGCATCGAGCTTGAATCGATTATTCATCCTAGTGAGTTAAGTTCCAACACTTCTTTCAAGCTAGTTAGTCAATTTAAAGGTTGCATGTGAAAATTACTGCTTATTTTTATGTTTTTAAATAGAGAAGACAAGAAGAAGCCCGATCATGCTGACTTGCAGTACAAATGCAGGACTTATACTTGTATTTTGCAACATTTAAAGGTCAAATTACTCAAAGGACTTGCTGTATGATTGCTTCTATTGCCTCCTTTTGTACTAATTTTTCTTCCTTTTATTACTTGTAGAGTCTTGATAAGAATTGCATGGATCTGTTGAGAAAAGCCTATTGTAGCTACCTTAACTTGCTTCTTCGCAGGGAGGTGAGTGAAAATACCGTACTACCTAGCTTTTGAACATTGCATGGGAGTTTTTGTTGAATATTTTTACGCTTTTAATCAAGTTTCAAATAAAATTTATGTTGATGCTATTTCTCAATGAGCTCATATTACCAGTTGAATCCATGCGTTTCTGAGCATGGCTGGGTTTGGCTAAATGAAAATGCAATCATGAATCAATAGGTTTTCTAATAATTTTAATAGATTTCTTCCTCCATTATGCTTCAGTTAAAGTTTTCTTTTACCTTTTTATTCACCTCTGTATTTTGTCTAGAATAATATGAGAACAACTTTATCTGCCACGAAGTCGTCCTTGGCTTTGAAAAATTTGTGTTCTTCCTTGCAGGCTGAGTTCACTTGTGTAGAATTTTTTTTAATCTTTTTTAAATCTTATGTTTTTTTTTTAATCTTTAGGCTCGTGAATATGCTAATGAGCTTCGTGCTAGCACCAAAGCATCAAGAATTTCAACTGTCCGGCTTGAAGCTTCCTTTGGGTCTGGTCAAAATGTGAGTGCAGCTGACACCTCTACTGTTTCAGAGGCTTATGGGAAGATGTTGACCATTTTTATCCCTCTTCTTGTAGATGAGGTTAAAATTCTGATTCTACACCAGGGTGCAAGGCAAAACGGAAAAAACCGGAAAACCGCTAAAACCGACGGTTCGGGTTCATACCGGTTCGGTTGGCGGTTCAGGTTTAAACCGCTTAAAAATCGGTCGGTTTAAGGTTTTGAAATGGTTAGACTGATTTTAGCCCGAGCCGACCGATAAATATATATAATATCAACTAAACGTAAATCAAAAAACATGCATGGTCCACGTGGTTTCACTATCATCAGGTACGTTTGAGGTCTTGTGTTCGAATCCTATTATCTTCACTCTTCACATTAATTTTGATATATATTTTGCGACCCGCGACCCAACACAAACATGCGCCCGCGGTTCGCCGTTTACATAACCGAACCGAACCGTCGGTCTAGAGTCAGTTCGGATCGGTTTCACATAACAACCGGTTTGGTGGCGGTTTTCAATGTTTCCTTAACCGAATAGTCAGTTCGGCTCCGGTTTTGTACAGTAATCGAGCTGAACCAACCCGTTTACACCCCTTTTCTACACGACTTGATCATTTGATAATTTTGTAAATGATCTTTTTCATGACAATAAATGCAAAGTTTATTTTTTGCTCACTTTATGTCCTTTCCTGCCCACGTGCCACCCGGTGGTAAACCAGGATATGATACAAAAACGACAATTTGGGCATTATGGTTATTGATGAAAACGACAGCAAATCTGATATTCGTACTGGCTGCTAACTCTATTCTTCCTCCAGATTTTGTGGGTGGGGAATATCTTATAGTTTATGATCATAAATAATTAAATATATAGTATCAGTTTTGAGTCTTTTGACATGCAACATTGTATGTTTGGGGAAAAATTCTGTCGAGCTTGCAGCATTAAATGAATCACGTCAGGACTTGCTTGATGGAATTCAGGTGATACTCCTTTGTTTTACATACCTTGTGCTCTGTTTTCACCATATTATTTTTCTCTTTACTGATAAGTGATAACTAACCATATTATTTTATATCAATCATTGATACGTTCTGCATATCAATGCATGGCATTACAGAGCTGCTCTGTCCAGCAGGATTGGCCGTCTTTTGCTTGGTGACTTGGAGTCAAGAATATCCATGCAGTTTAATCGTGTAAGTTTTGGCAATAAACTAAGGTTTAACATGTGCATGTACAAATTTGACTTGAAGCCAAGGCTGAGCGAGCGTTTAGCATTATGGTTTCACGCTTCTTGAAATTCCCTTTCTGTTTCAATTATCTTTGCATAGGGGTCAAGCAGTGCACGCGCAGGGGCCTGGGTGGGCGGTCCGCACGCGCGCAGGGGCTGGGTGGTGGTCGTGCAAGGGTTGGGCCGTGGGTGTGGGGTATGTGCGGGTGGATGTGTGGGCGTAAGGGGCTGGGTGGTGGTCGTGCAAGGGTTGGGTCGTGGGTGTGGGGTATGTGCGGGTGGATGTGTGGGCGTAGCACATATTGGAGAGTGTTGCTAACTTCTGTTTTTGCCCCACACCTGGACACTTGGGCTTGCTCGCACTCCTTCGACCATGTTATTGGCCTTAGCATGAATGCGAGCATCCTCGCATAG

mRNA sequence

ATGGTCTGTGCAAGTCCGGGAATCTGGATCGAGCTCAGAATATTCCATAAACTACCCCAGAAAGGTTTATCACCCACTGTTGTTACATACAATACTCTGATTGATGGATATTGTAAGGCTGGTAGAACAATAGAGGCTTTCAAACTCAAGGATAGAATGAGAGAAGGCATTTCTCCCTCTTCTGTTACCTATTCTACCTTGATACATGGGCTTCATAAGCGAGGAGATATTGAACAATCTGTGGGGCTTTTGAATGAAATGATCAAGGCAAGTAAAGACTCAAGTGTAATTGATCCACTTGTGAGTCTTGATAAGAATTGCATGGATCTGTTGAGAAAAGCCTATTGTAGCTACCTTAACTTGCTTCTTCGCAGGGAGGCTCGTGAATATGCTAATGAGCTTCGTGCTAGCACCAAAGCATCAAGAATTTCAACTGTCCGGCTTGAAGCTTCCTTTGGGTCTGGTCAAAATGTGAGTGCAGCTGACACCTCTACTGTTTCAGAGGCTTATGGGAAGATGTTGACCATTTTTATCCCTCTTCTTGTAGATGAGGTTAAAATTCTGATTCTACACCAGGGTGCAAGGCAAAACGGAAAAAACCGGAAAACCGCTAAAACCGACGGTTCGGGTTCATACCGGTTCGGTTGGCGGTTCAGAGCTGCTCTGTCCAGCAGGATTGGCCGTCTTTTGCTTGGTGACTTGGAGTCAAGAATATCCATGCAGTTTAATCGTGTAAGGGTCAAGCAGTGCACGCGCAGGGGCCTGGGTGGGCGGTCCGCACGCGCGCAGGGGCTGGGTGGTGGTCGTGCAAGGGTTGGGCCGTGGGTGTGGGGTATGTGCGGGTGGATGTGTGGGCGTAAGGGGCTGGGTGGTGGTCGTGCAAGGGTTGGGTCGTGGGTGTGGGGTATGTGCGGGTGGATGTGTGGGCGTAGCACATATTGGAGAGTGTTGCTAACTTCTGTTTTTGCCCCACACCTGGACACTTGGGCTTGCTCGCACTCCTTCGACCATGTTATTGGCCTTAGCATGAATGCGAGCATCCTCGCATAG

Coding sequence (CDS)

ATGGTCTGTGCAAGTCCGGGAATCTGGATCGAGCTCAGAATATTCCATAAACTACCCCAGAAAGGTTTATCACCCACTGTTGTTACATACAATACTCTGATTGATGGATATTGTAAGGCTGGTAGAACAATAGAGGCTTTCAAACTCAAGGATAGAATGAGAGAAGGCATTTCTCCCTCTTCTGTTACCTATTCTACCTTGATACATGGGCTTCATAAGCGAGGAGATATTGAACAATCTGTGGGGCTTTTGAATGAAATGATCAAGGCAAGTAAAGACTCAAGTGTAATTGATCCACTTGTGAGTCTTGATAAGAATTGCATGGATCTGTTGAGAAAAGCCTATTGTAGCTACCTTAACTTGCTTCTTCGCAGGGAGGCTCGTGAATATGCTAATGAGCTTCGTGCTAGCACCAAAGCATCAAGAATTTCAACTGTCCGGCTTGAAGCTTCCTTTGGGTCTGGTCAAAATGTGAGTGCAGCTGACACCTCTACTGTTTCAGAGGCTTATGGGAAGATGTTGACCATTTTTATCCCTCTTCTTGTAGATGAGGTTAAAATTCTGATTCTACACCAGGGTGCAAGGCAAAACGGAAAAAACCGGAAAACCGCTAAAACCGACGGTTCGGGTTCATACCGGTTCGGTTGGCGGTTCAGAGCTGCTCTGTCCAGCAGGATTGGCCGTCTTTTGCTTGGTGACTTGGAGTCAAGAATATCCATGCAGTTTAATCGTGTAAGGGTCAAGCAGTGCACGCGCAGGGGCCTGGGTGGGCGGTCCGCACGCGCGCAGGGGCTGGGTGGTGGTCGTGCAAGGGTTGGGCCGTGGGTGTGGGGTATGTGCGGGTGGATGTGTGGGCGTAAGGGGCTGGGTGGTGGTCGTGCAAGGGTTGGGTCGTGGGTGTGGGGTATGTGCGGGTGGATGTGTGGGCGTAGCACATATTGGAGAGTGTTGCTAACTTCTGTTTTTGCCCCACACCTGGACACTTGGGCTTGCTCGCACTCCTTCGACCATGTTATTGGCCTTAGCATGAATGCGAGCATCCTCGCATAG

Protein sequence

MVCASPGIWIELRIFHKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRMREGISPSSVTYSTLIHGLHKRGDIEQSVGLLNEMIKASKDSSVIDPLVSLDKNCMDLLRKAYCSYLNLLLRREAREYANELRASTKASRISTVRLEASFGSGQNVSAADTSTVSEAYGKMLTIFIPLLVDEVKILILHQGARQNGKNRKTAKTDGSGSYRFGWRFRAALSSRIGRLLLGDLESRISMQFNRVRVKQCTRRGLGGRSARAQGLGGGRARVGPWVWGMCGWMCGRKGLGGGRARVGSWVWGMCGWMCGRSTYWRVLLTSVFAPHLDTWACSHSFDHVIGLSMNASILA
Homology
[Close]
BLAST of Lag0036879 vs. NCBI nr
Match: XP_022140720.1 (putative pentatricopeptide repeat-containing protein At1g19290 [Momordica charantia])

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-35
Identity = 81/101 (80.20%), Postives = 88/101 (87.13%), Query Frame = 0 

Query: 2   VCASPGIWIELRIFHKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRM-REGISPS 61
           +C S  +    R+FHKL +KGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRM +EGISPS
Sbjct: 796 LCKSGNLDRAQRLFHKLHRKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRMTKEGISPS 855

Query: 62  SVTYSTLIHGLHKRGDIEQSVGLLNEMIKASKDSSVIDPLV 102
           SVTYSTLIHGL+KRGD+EQS GLLNEMIK  KDSSV DPLV
Sbjct: 856 SVTYSTLIHGLYKRGDVEQSAGLLNEMIKTCKDSSVTDPLV 896

[Close]
BLAST of Lag0036879 vs. NCBI nr
Match: XP_023523251.1 (putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita pepo subsp. pepo] >XP_023523252.1 putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 156.8 bits (395), Expect = 3.5e-34
Identity = 79/101 (78.22%), Postives = 87/101 (86.14%), Query Frame = 0 

Query: 2   VCASPGIWIELRIFHKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRM-REGISPS 61
           +C S  +   L +F KLP+KGLSPTVVTYNTLIDGYCKAGRT+EAFKLK+RM  EGISPS
Sbjct: 796 LCKSGNLDRALSLFRKLPRKGLSPTVVTYNTLIDGYCKAGRTVEAFKLKERMTEEGISPS 855

Query: 62  SVTYSTLIHGLHKRGDIEQSVGLLNEMIKASKDSSVIDPLV 102
           SVTYSTLIHGL KRGDIEQSVGLLNEMIKA KDSS +D L+
Sbjct: 856 SVTYSTLIHGLCKRGDIEQSVGLLNEMIKAGKDSSTLDSLL 896

[Close]
BLAST of Lag0036879 vs. NCBI nr
Match: KAG6608515.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 156.8 bits (395), Expect = 3.5e-34
Identity = 80/101 (79.21%), Postives = 87/101 (86.14%), Query Frame = 0 

Query: 2   VCASPGIWIELRIFHKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRM-REGISPS 61
           +C S  +   L +F KLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLK+RM  EGISPS
Sbjct: 219 LCKSGNLDRALSLFRKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKERMTEEGISPS 278

Query: 62  SVTYSTLIHGLHKRGDIEQSVGLLNEMIKASKDSSVIDPLV 102
           SVTYSTLIHGL KRGDIEQSVGLLNE+IKA KDSS +D L+
Sbjct: 279 SVTYSTLIHGLCKRGDIEQSVGLLNEIIKAGKDSSTMDSLL 319

[Close]
BLAST of Lag0036879 vs. NCBI nr
Match: XP_022940949.1 (putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita moschata])

HSP 1 Score: 156.8 bits (395), Expect = 3.5e-34
Identity = 80/101 (79.21%), Postives = 87/101 (86.14%), Query Frame = 0 

Query: 2   VCASPGIWIELRIFHKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRM-REGISPS 61
           +C S  +   L +F KLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLK+RM  EGISPS
Sbjct: 796 LCKSGNLDRALSLFRKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKERMTEEGISPS 855

Query: 62  SVTYSTLIHGLHKRGDIEQSVGLLNEMIKASKDSSVIDPLV 102
           SVTYSTLIHGL KRGDIEQSVGLLNE+IKA KDSS +D L+
Sbjct: 856 SVTYSTLIHGLCKRGDIEQSVGLLNEIIKAGKDSSTMDSLL 896

[Close]
BLAST of Lag0036879 vs. NCBI nr
Match: KAG7037839.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 156.8 bits (395), Expect = 3.5e-34
Identity = 80/101 (79.21%), Postives = 87/101 (86.14%), Query Frame = 0 

Query: 2   VCASPGIWIELRIFHKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRM-REGISPS 61
           +C S  +   L +F KLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLK+RM  EGISPS
Sbjct: 796 LCKSGNLDRALSLFRKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKERMTEEGISPS 855

Query: 62  SVTYSTLIHGLHKRGDIEQSVGLLNEMIKASKDSSVIDPLV 102
           SVTYSTLIHGL KRGDIEQSVGLLNE+IKA KDSS +D L+
Sbjct: 856 SVTYSTLIHGLCKRGDIEQSVGLLNEIIKAGKDSSTMDSLL 896

[Close]
BLAST of Lag0036879 vs. ExPASy Swiss-Prot
Match: Q9SX85 (Exocyst complex component SEC3A OS=Arabidopsis thaliana OX=3702 GN=SEC3A PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.2e-24
Identity = 91/241 (37.76%), Postives = 111/241 (46.06%), Query Frame = 0 

Query: 96  VIDPLVSLDKNCMDLLRKAYCSYLNLLLRREAREYANELRASTKASRISTVRLEASFGSG 155
           ++  L  LDKNC+  LRKAYCS LNLLLRREARE+ANELRASTK SR  TV LE S GS 
Sbjct: 435 LLQHLKGLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKVSRNPTVWLEGSTGSS 494

Query: 156 QNVSAADTSTVSEAYGKMLTIFIPLLVDEVKIL----------ILHQGARQNGKNRKTAK 215
           QN +  DTS VS+AY KMLTIFIPLLVDE              +   G   N K  ++  
Sbjct: 495 QNAN-TDTSAVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPALAPPGGAGNDKKSQSNN 554

Query: 216 TDGSGSYRFG-----------------------------------------WRFR----- 266
            DG+     G                                         W ++     
Sbjct: 555 DDGNDDDDLGIMDIDETDKKPGKNSPDLTALNESLQDLLDGIQEDFYAVVDWAYKIDPLR 614

[Close]
BLAST of Lag0036879 vs. ExPASy Swiss-Prot
Match: Q9SX86 (Exocyst complex component SEC3B OS=Arabidopsis thaliana OX=3702 GN=SEC3B PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 6.4e-23
Identity = 89/237 (37.55%), Postives = 108/237 (45.57%), Query Frame = 0 

Query: 100 LVSLDKNCMDLLRKAYCSYLNLLLRREAREYANELRASTKASRISTVRLEASFGSGQNVS 159
           L  L+KNC+  LRKAYCS LNLLLRREARE+A ELRASTK SR  TV LE S GS QN +
Sbjct: 439 LKGLNKNCLGPLRKAYCSSLNLLLRREAREFAKELRASTKVSRNPTVWLEGSTGSSQNAN 498

Query: 160 AADTSTVSEAYGKMLTIFIPLLVDEVKIL----------ILHQGARQNGKNRKTAKTDGS 219
             DTS VS+AY KMLTIFIPLLVDE              +   G   N K  ++   DG+
Sbjct: 499 -TDTSAVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPALAPPGGAGNDKKSQSNNDDGN 558

Query: 220 GSYRFG-----------------------------------------WRFR--------- 266
            +   G                                         W ++         
Sbjct: 559 DNDDLGIMDIDEADKKPGKNSPDLTALNESLQDLLDGIQEDFYAVVDWAYKIDPLRSISM 618

[Close]
BLAST of Lag0036879 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.5e-13
Identity = 38/78 (48.72%), Postives = 55/78 (70.51%), Query Frame = 0 

Query: 13  RIFHKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRM-REGISPSSVTYSTLIHGL 72
           ++FH++  KGL P  VT+  LI+GYCKAG   +AF++ + M + G SP+ VTY+TLI GL
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466

Query: 73  HKRGDIEQSVGLLNEMIK 90
            K GD++ +  LL+EM K
Sbjct: 467 CKEGDLDSANELLHEMWK 484

[Close]
BLAST of Lag0036879 vs. ExPASy Swiss-Prot
Match: Q9FMQ1 (Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g12100 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.6e-13
Identity = 34/76 (44.74%), Postives = 56/76 (73.68%), Query Frame = 0 

Query: 13  RIFHKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRMR-EGISPSSVTYSTLIHGL 72
           ++F ++  + L P+++TYNTLIDGYCKAG   ++FK+++RM+ + I PS +T++TL+ GL
Sbjct: 235 QLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGL 294

Query: 73  HKRGDIEQSVGLLNEM 88
            K G +E +  +L EM
Sbjct: 295 FKAGMVEDAENVLKEM 310

[Close]
BLAST of Lag0036879 vs. ExPASy Swiss-Prot
Match: Q9LUD6 (Pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g14580 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.9e-12
Identity = 34/87 (39.08%), Postives = 55/87 (63.22%), Query Frame = 0 

Query: 2   VCASPGIWIELRIFHKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRM-REGISPS 61
           +C S  +   L++  + PQ+   P V+T++ LI G+C  G+  EAFKL +RM +E I P 
Sbjct: 212 LCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPD 271

Query: 62  SVTYSTLIHGLHKRGDIEQSVGLLNEM 88
           ++T++ LI GL K+G +E+ + LL  M
Sbjct: 272 TITFNILISGLRKKGRVEEGIDLLERM 298

[Close]
BLAST of Lag0036879 vs. ExPASy TrEMBL
Match: A0A6J1CFX4 (putative pentatricopeptide repeat-containing protein At1g19290 OS=Momordica charantia OX=3673 GN=LOC111011313 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 5.3e-36
Identity = 81/101 (80.20%), Postives = 88/101 (87.13%), Query Frame = 0 

Query: 2   VCASPGIWIELRIFHKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRM-REGISPS 61
           +C S  +    R+FHKL +KGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRM +EGISPS
Sbjct: 796 LCKSGNLDRAQRLFHKLHRKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRMTKEGISPS 855

Query: 62  SVTYSTLIHGLHKRGDIEQSVGLLNEMIKASKDSSVIDPLV 102
           SVTYSTLIHGL+KRGD+EQS GLLNEMIK  KDSSV DPLV
Sbjct: 856 SVTYSTLIHGLYKRGDVEQSAGLLNEMIKTCKDSSVTDPLV 896

[Close]
BLAST of Lag0036879 vs. ExPASy TrEMBL
Match: A0A6J1FLS8 (putative pentatricopeptide repeat-containing protein At1g19290 OS=Cucurbita moschata OX=3662 GN=LOC111446381 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.7e-34
Identity = 80/101 (79.21%), Postives = 87/101 (86.14%), Query Frame = 0 

Query: 2   VCASPGIWIELRIFHKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRM-REGISPS 61
           +C S  +   L +F KLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLK+RM  EGISPS
Sbjct: 796 LCKSGNLDRALSLFRKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKERMTEEGISPS 855

Query: 62  SVTYSTLIHGLHKRGDIEQSVGLLNEMIKASKDSSVIDPLV 102
           SVTYSTLIHGL KRGDIEQSVGLLNE+IKA KDSS +D L+
Sbjct: 856 SVTYSTLIHGLCKRGDIEQSVGLLNEIIKAGKDSSTMDSLL 896

[Close]
BLAST of Lag0036879 vs. ExPASy TrEMBL
Match: A0A6J1J3C3 (putative pentatricopeptide repeat-containing protein At1g19290 OS=Cucurbita maxima OX=3661 GN=LOC111480971 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.9e-34
Identity = 79/101 (78.22%), Postives = 86/101 (85.15%), Query Frame = 0 

Query: 2   VCASPGIWIELRIFHKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRM-REGISPS 61
           +C S  +   L +F KLP+KGLSPT VTYNTLIDGYCKAGRTIEAFKLK+RM  EGISPS
Sbjct: 796 LCKSGNLDRALSLFRKLPRKGLSPTAVTYNTLIDGYCKAGRTIEAFKLKERMTEEGISPS 855

Query: 62  SVTYSTLIHGLHKRGDIEQSVGLLNEMIKASKDSSVIDPLV 102
           SVTYSTLIHGL KRGDIEQSVGLLNEMIKA KDSS +D L+
Sbjct: 856 SVTYSTLIHGLCKRGDIEQSVGLLNEMIKAGKDSSTMDSLL 896

[Close]
BLAST of Lag0036879 vs. ExPASy TrEMBL
Match: A0A5A7U704 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G00740 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.5e-30
Identity = 71/102 (69.61%), Postives = 84/102 (82.35%), Query Frame = 0 

Query: 2   VCASPGIWIELRIFHKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRMR-EGISPS 61
           +C S  +    R+FHKL QKGLSPTVVTYN LIDGYCK GRTI+A KLK++MR EG+SPS
Sbjct: 796 LCKSGNLDRAKRLFHKLAQKGLSPTVVTYNILIDGYCKGGRTIDALKLKNKMREEGLSPS 855

Query: 62  SVTYSTLIHGLHKRGDIEQSVGLLNEMIKASKDSSVIDPLVS 103
           S+TYSTLIHGL K G  +QSV LLNEM+KA K+SSV+DPLV+
Sbjct: 856 SITYSTLIHGLDKEGKSKQSVELLNEMMKAGKESSVMDPLVA 897

[Close]
BLAST of Lag0036879 vs. ExPASy TrEMBL
Match: A0A5D3BIB2 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G00060 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.5e-30
Identity = 71/102 (69.61%), Postives = 84/102 (82.35%), Query Frame = 0 

Query: 2   VCASPGIWIELRIFHKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRMR-EGISPS 61
           +C S  +    R+FHKL QKGLSPTVVTYN LIDGYCK GRTI+A KLK++MR EG+SPS
Sbjct: 796 LCKSGNLDRAKRLFHKLAQKGLSPTVVTYNILIDGYCKGGRTIDALKLKNKMREEGLSPS 855

Query: 62  SVTYSTLIHGLHKRGDIEQSVGLLNEMIKASKDSSVIDPLVS 103
           S+TYSTLIHGL K G  +QSV LLNEM+KA K+SSV+DPLV+
Sbjct: 856 SITYSTLIHGLDKEGKSKQSVELLNEMMKAGKESSVMDPLVA 897

[Close]
BLAST of Lag0036879 vs. TAIR 10
Match: AT1G47550.1 (exocyst complex component sec3A )

HSP 1 Score: 115.5 bits (288), Expect = 8.3e-26
Identity = 91/241 (37.76%), Postives = 111/241 (46.06%), Query Frame = 0 

Query: 96  VIDPLVSLDKNCMDLLRKAYCSYLNLLLRREAREYANELRASTKASRISTVRLEASFGSG 155
           ++  L  LDKNC+  LRKAYCS LNLLLRREARE+ANELRASTK SR  TV LE S GS 
Sbjct: 435 LLQHLKGLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKVSRNPTVWLEGSTGSS 494

Query: 156 QNVSAADTSTVSEAYGKMLTIFIPLLVDEVKIL----------ILHQGARQNGKNRKTAK 215
           QN +  DTS VS+AY KMLTIFIPLLVDE              +   G   N K  ++  
Sbjct: 495 QNAN-TDTSAVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPALAPPGGAGNDKKSQSNN 554

Query: 216 TDGSGSYRFG-----------------------------------------WRFR----- 266
            DG+     G                                         W ++     
Sbjct: 555 DDGNDDDDLGIMDIDETDKKPGKNSPDLTALNESLQDLLDGIQEDFYAVVDWAYKIDPLR 614

[Close]
BLAST of Lag0036879 vs. TAIR 10
Match: AT1G47550.2 (exocyst complex component sec3A )

HSP 1 Score: 113.2 bits (282), Expect = 4.1e-25
Identity = 64/89 (71.91%), Postives = 70/89 (78.65%), Query Frame = 0 

Query: 96  VIDPLVSLDKNCMDLLRKAYCSYLNLLLRREAREYANELRASTKASRISTVRLEASFGSG 155
           ++  L  LDKNC+  LRKAYCS LNLLLRREARE+ANELRASTK SR  TV LE S GS 
Sbjct: 435 LLQHLKGLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKVSRNPTVWLEGSTGSS 494

Query: 156 QNVSAADTSTVSEAYGKMLTIFIPLLVDE 185
           QN +  DTS VS+AY KMLTIFIPLLVDE
Sbjct: 495 QNAN-TDTSAVSDAYAKMLTIFIPLLVDE 522

[Close]
BLAST of Lag0036879 vs. TAIR 10
Match: AT1G47560.1 (exocyst complex component sec3B )

HSP 1 Score: 109.8 bits (273), Expect = 4.6e-24
Identity = 89/237 (37.55%), Postives = 108/237 (45.57%), Query Frame = 0 

Query: 100 LVSLDKNCMDLLRKAYCSYLNLLLRREAREYANELRASTKASRISTVRLEASFGSGQNVS 159
           L  L+KNC+  LRKAYCS LNLLLRREARE+A ELRASTK SR  TV LE S GS QN +
Sbjct: 439 LKGLNKNCLGPLRKAYCSSLNLLLRREAREFAKELRASTKVSRNPTVWLEGSTGSSQNAN 498

Query: 160 AADTSTVSEAYGKMLTIFIPLLVDEVKIL----------ILHQGARQNGKNRKTAKTDGS 219
             DTS VS+AY KMLTIFIPLLVDE              +   G   N K  ++   DG+
Sbjct: 499 -TDTSAVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPALAPPGGAGNDKKSQSNNDDGN 558

Query: 220 GSYRFG-----------------------------------------WRFR--------- 266
            +   G                                         W ++         
Sbjct: 559 DNDDLGIMDIDEADKKPGKNSPDLTALNESLQDLLDGIQEDFYAVVDWAYKIDPLRSISM 618

[Close]
BLAST of Lag0036879 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 2.5e-14
Identity = 38/78 (48.72%), Postives = 55/78 (70.51%), Query Frame = 0 

Query: 13  RIFHKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRM-REGISPSSVTYSTLIHGL 72
           ++FH++  KGL P  VT+  LI+GYCKAG   +AF++ + M + G SP+ VTY+TLI GL
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466

Query: 73  HKRGDIEQSVGLLNEMIK 90
            K GD++ +  LL+EM K
Sbjct: 467 CKEGDLDSANELLHEMWK 484

[Close]
BLAST of Lag0036879 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 2.5e-14
Identity = 38/78 (48.72%), Postives = 55/78 (70.51%), Query Frame = 0 

Query: 13  RIFHKLPQKGLSPTVVTYNTLIDGYCKAGRTIEAFKLKDRM-REGISPSSVTYSTLIHGL 72
           ++FH++  KGL P  VT+  LI+GYCKAG   +AF++ + M + G SP+ VTY+TLI GL
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466

Query: 73  HKRGDIEQSVGLLNEMIK 90
            K GD++ +  LL+EM K
Sbjct: 467 CKEGDLDSANELLHEMWK 484

The following BLAST results are available for this feature:
BLAST of Lag0036879 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022140720.11.1e-3580.20putative pentatricopeptide repeat-containing protein At1g19290 [Momordica charan... [more]
XP_023523251.13.5e-3478.22putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita pepo s... [more]
KAG6608515.13.5e-3479.21putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros... [more]
XP_022940949.13.5e-3479.21putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita moscha... [more]
KAG7037839.13.5e-3479.21putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros... [more]
BLAST of Lag0036879 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SX851.2e-2437.76Exocyst complex component SEC3A OS=Arabidopsis thaliana OX=3702 GN=SEC3A PE=1 SV... [more]
Q9SX866.4e-2337.55Exocyst complex component SEC3B OS=Arabidopsis thaliana OX=3702 GN=SEC3B PE=2 SV... [more]
Q0WVK73.5e-1348.72Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
Q9FMQ14.6e-1344.74Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidop... [more]
Q9LUD63.9e-1239.08Pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Arabidop... [more]
BLAST of Lag0036879 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CFX45.3e-3680.20putative pentatricopeptide repeat-containing protein At1g19290 OS=Momordica char... [more]
A0A6J1FLS81.7e-3479.21putative pentatricopeptide repeat-containing protein At1g19290 OS=Cucurbita mosc... [more]
A0A6J1J3C34.9e-3478.22putative pentatricopeptide repeat-containing protein At1g19290 OS=Cucurbita maxi... [more]
A0A5A7U7042.5e-3069.61Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... [more]
A0A5D3BIB22.5e-3069.61Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... [more]
BLAST of Lag0036879 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G47550.18.3e-2637.76exocyst complex component sec3A [more]
AT1G47550.24.1e-2571.91exocyst complex component sec3A [more]
AT1G47560.14.6e-2437.55exocyst complex component sec3B [more]
AT1G05670.12.5e-1448.72Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G05670.22.5e-1448.72Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 8..179
e-value: 1.2E-24
score: 89.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 25..73
e-value: 2.2E-16
score: 59.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 62..90
e-value: 3.2E-4
score: 18.7
coord: 28..56
e-value: 4.2E-9
score: 34.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 26..56
score: 11.202506
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 60..94
score: 9.328124
NoneNo IPR availablePANTHERPTHR16092SEC3/SYNTAXIN-RELATEDcoord: 96..188
NoneNo IPR availablePANTHERPTHR16092:SF30EXOCYST COMPLEX COMPONENT SEC3Bcoord: 96..188

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0036879.1Lag0036879.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006887 exocytosis
cellular_component GO:0000145 exocyst
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0016740 transferase activity