Lag0012070 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0012070
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr1: 37053504 .. 37058855 (+)
RNA-Seq ExpressionLag0012070
SyntenyLag0012070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCAGATTAACATGCTTTCTTCCTCATAGACGGCGCCAACTTTTGATGGTCAAATTTGGTCAGAGGAACTCACCTGACCTTCACGTGCCACCAACGGTAAATTTGTTGGAGAGGGGGGAAGATGTGGCCTGCAAGACGGTAAACCTACACACCGGTGTGGTGCTAGCCACACCGGCTTCGATGCTTAAGTCAGAAAACGGAAGTAGGAGGGCTAGAGAGTAAGAGAAGAGAGTAAGAGAAGAGAGTAGAGAGTTCGGGTCCCCTTCTTCAGTGGCGAAGAGGGGTATAAATACATGCTCATCCTCCTAGGATTTTTAGAAATTCGAAGGCGTTTCGGGACAAACCAGGTGAAACCGGGGCGGCTAGAGGCTACAAGGACCGAATGGAGTCGGAGGGACTCGGCTAGAGGCCAAAGGCCGAGGCCGAGCATGGGGTCGGGCCAAAAGCCCGACCCCTTCGGTCTCGGCCCGACCCACTGGCCCGTTTCGCCCTTAGAGTCCATTCTCTAGTCTGATTTCTGCCCGATTGTCCTCGCTCCTTGTGCACCGAGGTGGTCCAAAATCACCTATACACATGGACTAATGTTATTTACTATTTTTATATAAAATAATGTGATTTAATGTCTTAGAAACTATTGATATAAAAAAATTGGTATTGCTTACTATTATTATCATCACTATTGTTGTTGTTATTTATCTTATTTTTGTAGAGACCAAAATAATAATAAGAATAATAAAATAAAATAACTCCTTCCATTTGTGTTGTGTTGAAATTTATATAAATTCCATTGAATGGTGAAACTTCGTTGTGGGGTCTCTAATTGAATTTGATTGTAATGATATGACAAGTATCAAACTTTATAAAAAATTATTTGACTTTGTGGACATATCAATATAACAAAAAGAAAACTTCAAAAAAAAAAAAAGGGAAAAATACACTTTTGGTCCCTGAGGTTTGGGTTAAGTGACACTTAGGTCCCTGAGTTTTCAAACTCAACAAAAATACCCCTGAGTTTTGAGATAAGTAGCACTTTGGTCCCTGCCGTCAATTTTTCTGTTAAATCTTAACAGCTGCTGCTGATGTGGCACTATTATTTTAATAAAAAAATTATTTTTTAATTTTTTTAATACAAAAATATTAAAATATTATTATTTTATATATTTTTTTTAAATACTTTTCCCCTTTTCTCTTTCTTCCTCTTCTCCACCTCCTTCTCCTAACTTCTTCTTCCCAACTTCATCTTCTTCAACTCTGGCGGCCGGCCGCCGCCGCCGTTCGTGGCGATTTTTTTTTTTTTTTTTTTTTTAATTTCTTTCTTTCCCTCTCTTTTCTTCTCTTTCTCTTCCCTTTCTTCACATTTTCTTTTTTTTTTTTAAATATAGAAGAGGGAGAGGGAGGAGGCTTTTCCCTCCCTTTCCGGCGCCGGCGACGGGAGGAGGGAGGCCCTCCTCCCTCACGGCTTCAAATCTATAAGTTTACAAGCGAAAAGGGATGGCTTTGTCTACAAGCGCAAGAGGCGTCGGCTGGACCCGACAGAAGGCGTTGCAACTCGTTCGTCGGTGGCTCAGGCGGCGGACCTTCAGGCGGAGGAGAATCGGCGGCGAGAGCGCAGGAGGAAGACGTTGTTGAAGGTTAGAGCGAAGTATCAGAGAGAGATTGAGCAGTGGGAGGTTTTGTCGAACAACTTGCGGGCGATGGAGGAGATGACTCGGAAGCTGCAGGAACTGTACAGACGGGAAGAGGAAGAAGGAACCGCGTCGCTTCTGGGCGCTTCCTTGTTGAACGTGGTTCAGGAGAAGGAGTTGTCCTGCGCGTCGATGGTGGAGGAACTTCTCTCTCAGGTAAATCGATATTCAGTCTTGTGTCATAATTTAGGGAAAATAGACAAGGAATTGAAATTTTCAGCTTCAGGCGTCCAGTCATTTAGGAATTTCCTCAATTTGCTTGAAATTCATCATTCGTGGTAAAATTTCATGGCTTGAAGAACGAATTTCCAGTTCAGTTTGCCTTTTTTTTTTTGCAAATTGGGTAAAATCGCGTTGAACCCATTATTCCTTTTGTCACTTAACAAATTCTGCGAAGAAAAGTGTCCCTCTTTTAGTGGTATGAGGTTTAGATTAGAGAAATCCATTAGAAAGACCCACTATCAACGCCATATTCAAGCAGATCTGGACGGGGAGGGAGGAAGGCCTCCCTCCTCCTCTGTTTCGCGCCGGAAACGGAGGAGGAGACAGTCTCCTCCTCTGTTTCGCGCCGGAAATGGAGGAGGTCCTCCCTCCTCCTCTTGTTCATTTAAAAAAAAAATTGAAAAGAAAAATGGGATAAGAGAGAAGAAGAAAAGAGAAGAAGAGAAGAAAAAAAAAACAGTCGCCGGCGACCGCCGCCGTCGCCGGTCGACGGAGTTAGGAAGAAGAAGAAGGAAGATGAAGGATATGGAGAAAGAGAAGAAAGAGAAAGGGAGAAAAAAGAATAAAAAAATAAAAATATATTAATATTTTATTATTTTATTATTTTTATTTTTAAAAATTAAAAAAATAATTTTTTATTAAAATAATAGTGCCACGTCAGCAACTGTTAAGATTTAACAGAAAAATTAACGGCAGGGACTAAAATGCTTCTTATCTCAAACCTCAGGGGTATTTTTGTTGAGTTTGAAAACTCAGGGACCAAAGTGTCACTTAACCCAAACCTCAGGGACCAAAAGTGTATTTTTCCCAAAAATTTATCTCTCCTACTAGCCATCTCATTTGGGAATGTAAATGCTTGAGAGCGACGTGGCTATGTTTTATTCCTAAATGTCTCACTTTCTAAAATTTGTGTAAGGGAAAGGTGGAATCCCCTGGATCATTGGTCATGACCGGTCGAAAATGTTGAGGAAGGTGATCTCGAAAAGACAATCATCATTATGTGGAGTGTTTGGAAATGGACGGAACAAATGTACATCATCAAATTCATCCCCATAATAAACACATATTTTCAAACAGATTCATGATAGTATCATAGAGCAAATGGATGATAAGTGTTGAGGATCCCACATTGAAAAGTTTAGTGGAGACCTCACAATATATAAGCTACAAGGGTCACTCCACTCATAGCCAATTGGTTTTGAGATGGAAACCCATATAATATAATATGGTATCAGAGCCCATTAAACCCAAACGGGTATTTGGTCCAATAAAAAGAAATTGAGATCCGATCCAAGAATGGTGAACCCAAAGAATACCTCAGGCGTGCAAAGATGGAAACTTCAGGGAGCCACCCGAGTCATGGTTGTTGGCTGAATTAGTCGAAGAATATCTGGAAGATGAACACTGATGCTACCTGGAATGAGAAGAATGACACATTGGAGGAATTGGGTGGGCTATCCATGACTCCACTGGCTCCCCGACTAGTTTTGTACTAAATCCAATCAAAAGGAAATGACCTATAAAAGCCAAGCCAAAGCAATTTGGGAAGTGTTAATTTGCACGGCTAACCTTTGTAAGGAGTATCGCCCTCAGATGATTGAATCAGACGCGTTGGAGGTGATCAACGTTCTACGAAAGACTTCTTTGAGATGAAGAATTTTACGGACGTCATATCGCCCTTTTGTGCCGACTTGGGAGATGTGAAGTTTCGCCACTGCCCTAAGTATCATAACACAGTAACCCACTGTATAGCTCGTTTGTTTCATCGGATTTTGGCTAGAATTAGAGATCCTCCTTTTTGCGGGAGGATGGGCGCGACTGTGTTCCCCTGGTTTATTTCCCTCATTAGGAGGGTAGGTGTAACAAACATTTGTTTATTTAACATATTTCCTATTTAAAAAAAAAAAAAAAAAAAAAAAAAACTCCACCTTGTTATTTAAAAAAAAAAAAAAAAAAAAATCTCTCTCCACCTTTTTACTTATTTCCCAATGGAAGATAATAAAGAAACTCATAGTTCATGAGATATTTTTATAGAAAATTTGTTAGTTTTTACTCAAAACGTTTTTAGGTATACAAAAATAACCTACTTTTTAAAACTCATGAAACATATATGGTGTATCTATCTATCTATATATCTATATATATATATATATATATATATAAACGATTAATCTAAATTGAAGGTAAATAAAGATTTATATTTTAAAAAATAAATATATAACAAACAAATCTAGGTTTTTTTTCTCCACAAAACGAAACAAATCTAAGTCGAATGTCGATGTCGACGAAAATGTAGAGGTCTCAATTTTGTGGAAACGTGGATGGAAATAATCGACAAAAATTCGATGTCGATGGAAAAATGTTTAAAATAAAATAATTCAAAAAATATTAAAATTAACAAATAAATGTTTTCCATCTTAAAAATAAGAAAAATACTTCTTCTAAGTATTATCTCCACATTAGTTACATTTTGTTATTGTTTTTTTTTTTTTATTTTATCAATTTATTTACTATATAATGAAAATGTCGATTCACTCCGCATGTTCAGTGGGAGTGTAGAGGGTCGAAGATTTATTGGAGAGAGTCTCCTTTTGTCCCTCGGCTTGGGCCTTCGACTATAAGGAGACCGACAGATTTGTTGTGGTGCTGCTGGAGGGAGATGGTGGGGACTGAATTTGAGGATTTTTGTGGTGATGTGTTGGTGGGTGTGGAATAGGAGAACTAAGGAACTGTTTGAGGATCGTGTTTCGGGGGAAAGGAGGAGAGTGGTTGGCAATGGGTTGTTGACTACCTATCGCATTTTAGGGCCTTTCACCGTATGGGCAGTGCAAGTGTGGTGAGGAGGGTACTACCTATCACATTTTAGGGTCTTTCACCGTAGGGGCCGTGCAAGTGTGGTGAGGGGGGTGATAATGAAGTTTGGTTTCCCTCTGTTTTCCCAAATTACAAGCTCAATACTGATATAGCAGTCAACAAAGAACTCTATTTGAGTAGTATTGGGACAATGATCAGAAATGAAAGAGGGGAAGTGATGCTTACCTTGATGAAGCTGATCAGATATGTGCTTGATGTCGATGTTTTGGAGGTGATGGCTATTCGCGAAGGGCTGGCAGTAGTTGTTGAGGCCGGCTTCTCACAGATGGAGGTGGAGTCGGATTCGGCTAGAGTGGTGAGAAGGATCAGATCTGAGTCTAATGAGTGTTCGGAGTTGGGTTTAATAGTAGAAGATATCAAGAGTTTAGCCGGTGTGTTGAGCTTTTGCTCGTTTAGCTGGTGTCGGCGGTCGAGGAACCTGGTGGCGCACGAGATAGCGAAAGCAGCGTTGAGGTCGGAACTGGAAGGGGTGTGGCTGGAGGAGTTGCCGACGGATGCTGGGAATTCCTTCGTTGCAGAGCTGAGGCCTTTCGATTTGGGGGCTAGGGATTTCTGTAATGATTCTTAG

mRNA sequence

ATGTGCAGATTAACATGCTTTCTTCCTCATAGACGGCGCCAACTTTTGATGGTCAAATTTGGTCAGAGGAACTCACCTGACCTTCACGTGCCACCAACGGTAAATTTGTTGGAGAGGGGGGAAGATGTGGCCTGCAAGACGGTAAACCTACACACCGGTGTGGTGCTAGCCACACCGGCTTCGATGCTTAAGTCAGAAAACGGAAGTAGGAGGGCTAGAGAGCGTTTCGGGACAAACCAGGTGAAACCGGGGCGGCTAGAGGCTACAAGGACCGAATGGAGTCGGAGGGACTCGGCTAGAGGCCAAAGGCCGAGGCCGAGCATGGGGTCGGGCCAAAAGCCCGACCCCTTCGGTCTCGGCCCGACCCACTGGCCCAAGAGGGAGAGGGAGGAGGCTTTTCCCTCCCTTTCCGGCGCCGGCGACGGGAGGAGGGAGGCCCTCCTCCCTCACGGCTTCAAATCTATAAGTTTACAAGCGAAAAGGGATGGCTTTGTCTACAAGCGCAAGAGGCGTCGGCTGGACCCGACAGAAGGCGTTGCAACTCGTTCGTCGGTGGCTCAGGCGGCGGACCTTCAGGCGGAGGAGAATCGGCGGCGAGAGCGCAGGAGGAAGACGTTGTTGAAGGTTAGAGCGAAGTATCAGAGAGAGATTGAGCAGTGGGAGGTTTTGTCGAACAACTTGCGGGCGATGGAGGAGATGACTCGGAAGCTGCAGGAACTGTACAGACGGGAAGAGGAAGAAGGAACCGCGTCGCTTCTGGGCGCTTCCTTGTTGAACGTGGTTCAGGAGAAGGAGTTGTCCTGCGCGTCGATGGTGGAGGAACTTCTCTCTCAGATCTGGACGGGGAGGGAGGAAGGCCTCCCTCCTCCTCTGTTTCGCGCCGGAAACGGAGGAGGAGACAGTCTCCTCCTCTGTTTCGCGCCGGAAATGGAGGAGTCGAAGAATATCTGGAAGATGAACACTGATGCTACCTGGAATGAGAAGAATGACACATTGGAGGAATTGGGTGGGCTATCCATGACTCCACTGGCTCCCCGACTAGTTTTACGCGTTGGAGGTGATCAACGTTCTACGAAAGACTTCTTTGAGATGAAGAATTTTACGGACGTCATATCGCCCTTTTGTGCCGACTTGGGAGATGTGAAGTTTCGCCACTGCCCTAAGTATCATAACACAGTAACCCACTGTATAGCTCGTTTGTTTCATCGGATTTTGGCTAGAATTAGAGATCCTCCTTTTTGCGGGAGGATGGGCGCGACTGTGTTCCCCTGGTTTATTTCCCTCATTAGGAGGTGGGAGTGTAGAGGGTCGAAGATTTATTGGAGAGAGTCTCCTTTTGTCCCTCGGCTTGGGCCTTCGACTATAAGGAGACCGACAGATTTGTTGTGGTGCTGCTGGAGGGAGATGGTGGGGACTGAATTTGAGGATTTTTGTGGTGATGTGTTGGGGCCGTGCAAGTGTGGTGAGGGGGGTGATAATGAAGTTTGGTTTCCCTCTGTTTTCCCAAATTACAAGCTCAATACTGATATAGCAGTCAACAAAGAACTCTATTTGAGTAGTATTGGGACAATGATCAGAAATGAAAGAGGGGAAGTGATGCTTACCTTGATGAAGCTGATCAGATATGTGCTTGATGTCGATGTTTTGGAGGTGATGGCTATTCGCGAAGGGCTGGCAGTAGTTGTTGAGGCCGGCTTCTCACAGATGGAGGTGGAGTCGGATTCGGCTAGAGTGGTGAGAAGGATCAGATCTGAGTCTAATGAGTGTTCGGAGTTGGGTTTAATAGTAGAAGATATCAAGAGTTTAGCCGGTGTGTTGAGCTTTTGCTCGTTTAGCTGGTGTCGGCGGTCGAGGAACCTGGTGGCGCACGAGATAGCGAAAGCAGCGTTGAGGTCGGAACTGGAAGGGGTGTGGCTGGAGGAGTTGCCGACGGATGCTGGGAATTCCTTCGTTGCAGAGCTGAGGCCTTTCGATTTGGGGGCTAGGGATTTCTGTAATGATTCTTAG

Coding sequence (CDS)

ATGTGCAGATTAACATGCTTTCTTCCTCATAGACGGCGCCAACTTTTGATGGTCAAATTTGGTCAGAGGAACTCACCTGACCTTCACGTGCCACCAACGGTAAATTTGTTGGAGAGGGGGGAAGATGTGGCCTGCAAGACGGTAAACCTACACACCGGTGTGGTGCTAGCCACACCGGCTTCGATGCTTAAGTCAGAAAACGGAAGTAGGAGGGCTAGAGAGCGTTTCGGGACAAACCAGGTGAAACCGGGGCGGCTAGAGGCTACAAGGACCGAATGGAGTCGGAGGGACTCGGCTAGAGGCCAAAGGCCGAGGCCGAGCATGGGGTCGGGCCAAAAGCCCGACCCCTTCGGTCTCGGCCCGACCCACTGGCCCAAGAGGGAGAGGGAGGAGGCTTTTCCCTCCCTTTCCGGCGCCGGCGACGGGAGGAGGGAGGCCCTCCTCCCTCACGGCTTCAAATCTATAAGTTTACAAGCGAAAAGGGATGGCTTTGTCTACAAGCGCAAGAGGCGTCGGCTGGACCCGACAGAAGGCGTTGCAACTCGTTCGTCGGTGGCTCAGGCGGCGGACCTTCAGGCGGAGGAGAATCGGCGGCGAGAGCGCAGGAGGAAGACGTTGTTGAAGGTTAGAGCGAAGTATCAGAGAGAGATTGAGCAGTGGGAGGTTTTGTCGAACAACTTGCGGGCGATGGAGGAGATGACTCGGAAGCTGCAGGAACTGTACAGACGGGAAGAGGAAGAAGGAACCGCGTCGCTTCTGGGCGCTTCCTTGTTGAACGTGGTTCAGGAGAAGGAGTTGTCCTGCGCGTCGATGGTGGAGGAACTTCTCTCTCAGATCTGGACGGGGAGGGAGGAAGGCCTCCCTCCTCCTCTGTTTCGCGCCGGAAACGGAGGAGGAGACAGTCTCCTCCTCTGTTTCGCGCCGGAAATGGAGGAGTCGAAGAATATCTGGAAGATGAACACTGATGCTACCTGGAATGAGAAGAATGACACATTGGAGGAATTGGGTGGGCTATCCATGACTCCACTGGCTCCCCGACTAGTTTTACGCGTTGGAGGTGATCAACGTTCTACGAAAGACTTCTTTGAGATGAAGAATTTTACGGACGTCATATCGCCCTTTTGTGCCGACTTGGGAGATGTGAAGTTTCGCCACTGCCCTAAGTATCATAACACAGTAACCCACTGTATAGCTCGTTTGTTTCATCGGATTTTGGCTAGAATTAGAGATCCTCCTTTTTGCGGGAGGATGGGCGCGACTGTGTTCCCCTGGTTTATTTCCCTCATTAGGAGGTGGGAGTGTAGAGGGTCGAAGATTTATTGGAGAGAGTCTCCTTTTGTCCCTCGGCTTGGGCCTTCGACTATAAGGAGACCGACAGATTTGTTGTGGTGCTGCTGGAGGGAGATGGTGGGGACTGAATTTGAGGATTTTTGTGGTGATGTGTTGGGGCCGTGCAAGTGTGGTGAGGGGGGTGATAATGAAGTTTGGTTTCCCTCTGTTTTCCCAAATTACAAGCTCAATACTGATATAGCAGTCAACAAAGAACTCTATTTGAGTAGTATTGGGACAATGATCAGAAATGAAAGAGGGGAAGTGATGCTTACCTTGATGAAGCTGATCAGATATGTGCTTGATGTCGATGTTTTGGAGGTGATGGCTATTCGCGAAGGGCTGGCAGTAGTTGTTGAGGCCGGCTTCTCACAGATGGAGGTGGAGTCGGATTCGGCTAGAGTGGTGAGAAGGATCAGATCTGAGTCTAATGAGTGTTCGGAGTTGGGTTTAATAGTAGAAGATATCAAGAGTTTAGCCGGTGTGTTGAGCTTTTGCTCGTTTAGCTGGTGTCGGCGGTCGAGGAACCTGGTGGCGCACGAGATAGCGAAAGCAGCGTTGAGGTCGGAACTGGAAGGGGTGTGGCTGGAGGAGTTGCCGACGGATGCTGGGAATTCCTTCGTTGCAGAGCTGAGGCCTTTCGATTTGGGGGCTAGGGATTTCTGTAATGATTCTTAG

Protein sequence

MCRLTCFLPHRRRQLLMVKFGQRNSPDLHVPPTVNLLERGEDVACKTVNLHTGVVLATPASMLKSENGSRRARERFGTNQVKPGRLEATRTEWSRRDSARGQRPRPSMGSGQKPDPFGLGPTHWPKREREEAFPSLSGAGDGRREALLPHGFKSISLQAKRDGFVYKRKRRRLDPTEGVATRSSVAQAADLQAEENRRRERRRKTLLKVRAKYQREIEQWEVLSNNLRAMEEMTRKLQELYRREEEEGTASLLGASLLNVVQEKELSCASMVEELLSQIWTGREEGLPPPLFRAGNGGGDSLLLCFAPEMEESKNIWKMNTDATWNEKNDTLEELGGLSMTPLAPRLVLRVGGDQRSTKDFFEMKNFTDVISPFCADLGDVKFRHCPKYHNTVTHCIARLFHRILARIRDPPFCGRMGATVFPWFISLIRRWECRGSKIYWRESPFVPRLGPSTIRRPTDLLWCCWREMVGTEFEDFCGDVLGPCKCGEGGDNEVWFPSVFPNYKLNTDIAVNKELYLSSIGTMIRNERGEVMLTLMKLIRYVLDVDVLEVMAIREGLAVVVEAGFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGVLSFCSFSWCRRSRNLVAHEIAKAALRSELEGVWLEELPTDAGNSFVAELRPFDLGARDFCNDS
Homology
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BLAST of Lag0012070 vs. NCBI nr
Match: XP_022989565.1 (uncharacterized protein LOC111486625 [Cucurbita maxima])

HSP 1 Score: 189.5 bits (480), Expect = 9.3e-44
Identity = 103/118 (87.29%), Postives = 109/118 (92.37%), Query Frame = 0 

Query: 162 DGFVYKRKRRRLDPTEGVATRSSVAQAADLQAEENRRRERRRKTLLKVRAKYQREIEQWE 221
           DGFVYKRKRRRLDPTE VA RSSVAQAADL+AEENRRRERRRKTLLKVRAKYQREIEQWE
Sbjct: 24  DGFVYKRKRRRLDPTEAVAARSSVAQAADLEAEENRRRERRRKTLLKVRAKYQREIEQWE 83

Query: 222 VLSNNLRAMEEMTRKLQELYRREEEEGTASLLGASLLNVVQEKELSCASMVEELLSQI 280
           VLSNNLRAMEE TRKLQE YRRE EEGTAS L AS LN++ EKELSC+SMVE+LLSQ+
Sbjct: 84  VLSNNLRAMEERTRKLQEQYRREGEEGTASFLEASSLNLIPEKELSCSSMVEDLLSQV 141

[Close]
BLAST of Lag0012070 vs. NCBI nr
Match: KAG6588936.1 (hypothetical protein SDJN03_17501, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022706.1 hypothetical protein SDJN02_16440, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184.1 bits (466), Expect = 3.9e-42
Identity = 102/118 (86.44%), Postives = 106/118 (89.83%), Query Frame = 0 

Query: 162 DGFVYKRKRRRLDPTEGVATRSSVAQAADLQAEENRRRERRRKTLLKVRAKYQREIEQWE 221
           DGFVYKRKRRRLDP E VA RSSVAQAADL+AEENRRRERRR TLLKVRAKYQREIEQWE
Sbjct: 24  DGFVYKRKRRRLDPAEAVAARSSVAQAADLEAEENRRRERRRMTLLKVRAKYQREIEQWE 83

Query: 222 VLSNNLRAMEEMTRKLQELYRREEEEGTASLLGASLLNVVQEKELSCASMVEELLSQI 280
           VLSNNLRAMEE TRKL+E YRRE EEGTA  L AS LN VQEKELSCASMVE+LLSQ+
Sbjct: 84  VLSNNLRAMEERTRKLREQYRREGEEGTALFLEASSLNSVQEKELSCASMVEDLLSQV 141

[Close]
BLAST of Lag0012070 vs. NCBI nr
Match: XP_022928186.1 (uncharacterized protein LOC111435083 [Cucurbita moschata])

HSP 1 Score: 183.3 bits (464), Expect = 6.7e-42
Identity = 102/118 (86.44%), Postives = 105/118 (88.98%), Query Frame = 0 

Query: 162 DGFVYKRKRRRLDPTEGVATRSSVAQAADLQAEENRRRERRRKTLLKVRAKYQREIEQWE 221
           DGFVYKRKRRRLDP E VA RSSVAQAADL+AEENRRRERRR TLLKVRAKYQREIEQWE
Sbjct: 24  DGFVYKRKRRRLDPAEAVAARSSVAQAADLEAEENRRRERRRMTLLKVRAKYQREIEQWE 83

Query: 222 VLSNNLRAMEEMTRKLQELYRREEEEGTASLLGASLLNVVQEKELSCASMVEELLSQI 280
           VLSNNLRA EE TRKLQE YRRE EEGTA  L AS LN VQEKELSCASMVE+LLSQ+
Sbjct: 84  VLSNNLRATEERTRKLQEQYRREGEEGTALFLEASSLNSVQEKELSCASMVEDLLSQV 141

[Close]
BLAST of Lag0012070 vs. NCBI nr
Match: XP_023530399.1 (uncharacterized protein LOC111792986 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 178.3 bits (451), Expect = 2.2e-40
Identity = 100/118 (84.75%), Postives = 104/118 (88.14%), Query Frame = 0 

Query: 162 DGFVYKRKRRRLDPTEGVATRSSVAQAADLQAEENRRRERRRKTLLKVRAKYQREIEQWE 221
           DGFVYKRKRRRLDP E VA RSSVAQAADL+AEENRRRERRR TLLKVRAKYQREIEQWE
Sbjct: 24  DGFVYKRKRRRLDPAEAVAARSSVAQAADLEAEENRRRERRRMTLLKVRAKYQREIEQWE 83

Query: 222 VLSNNLRAMEEMTRKLQELYRREEEEGTASLLGASLLNVVQEKELSCASMVEELLSQI 280
           VLSNNLRAMEE TRKL+E  RRE EEG A  L AS LN VQEKELSCASMVE+LLSQ+
Sbjct: 84  VLSNNLRAMEERTRKLREQSRREGEEGMALFLEASSLNSVQEKELSCASMVEDLLSQV 141

[Close]
BLAST of Lag0012070 vs. NCBI nr
Match: XP_038904940.1 (uncharacterized protein LOC120091144 [Benincasa hispida])

HSP 1 Score: 177.2 bits (448), Expect = 4.8e-40
Identity = 97/118 (82.20%), Postives = 105/118 (88.98%), Query Frame = 0 

Query: 162 DGFVYKRKRRRLDPTEGVATRSSVAQAADLQAEENRRRERRRKTLLKVRAKYQREIEQWE 221
           DGFVYKRKRRRLDP E VA RSSVAQA DL+AEENRRRE RRKTLLKVRAKYQRE+EQWE
Sbjct: 24  DGFVYKRKRRRLDPAEAVAARSSVAQAVDLEAEENRRREGRRKTLLKVRAKYQREMEQWE 83

Query: 222 VLSNNLRAMEEMTRKLQELYRREEEEGTASLLGASLLNVVQEKELSCASMVEELLSQI 280
           VLS NLR MEE TRKLQE YRR+ EEGTASLL AS L VV+EKE+SCASMV++LLSQ+
Sbjct: 84  VLSGNLREMEERTRKLQEQYRRDGEEGTASLLEASSLTVVREKEVSCASMVDDLLSQV 141

[Close]
BLAST of Lag0012070 vs. ExPASy TrEMBL
Match: A0A6J1JMQ6 (uncharacterized protein LOC111486625 OS=Cucurbita maxima OX=3661 GN=LOC111486625 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.5e-44
Identity = 103/118 (87.29%), Postives = 109/118 (92.37%), Query Frame = 0 

Query: 162 DGFVYKRKRRRLDPTEGVATRSSVAQAADLQAEENRRRERRRKTLLKVRAKYQREIEQWE 221
           DGFVYKRKRRRLDPTE VA RSSVAQAADL+AEENRRRERRRKTLLKVRAKYQREIEQWE
Sbjct: 24  DGFVYKRKRRRLDPTEAVAARSSVAQAADLEAEENRRRERRRKTLLKVRAKYQREIEQWE 83

Query: 222 VLSNNLRAMEEMTRKLQELYRREEEEGTASLLGASLLNVVQEKELSCASMVEELLSQI 280
           VLSNNLRAMEE TRKLQE YRRE EEGTAS L AS LN++ EKELSC+SMVE+LLSQ+
Sbjct: 84  VLSNNLRAMEERTRKLQEQYRREGEEGTASFLEASSLNLIPEKELSCSSMVEDLLSQV 141

[Close]
BLAST of Lag0012070 vs. ExPASy TrEMBL
Match: A0A6J1EJL6 (uncharacterized protein LOC111435083 OS=Cucurbita moschata OX=3662 GN=LOC111435083 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.2e-42
Identity = 102/118 (86.44%), Postives = 105/118 (88.98%), Query Frame = 0 

Query: 162 DGFVYKRKRRRLDPTEGVATRSSVAQAADLQAEENRRRERRRKTLLKVRAKYQREIEQWE 221
           DGFVYKRKRRRLDP E VA RSSVAQAADL+AEENRRRERRR TLLKVRAKYQREIEQWE
Sbjct: 24  DGFVYKRKRRRLDPAEAVAARSSVAQAADLEAEENRRRERRRMTLLKVRAKYQREIEQWE 83

Query: 222 VLSNNLRAMEEMTRKLQELYRREEEEGTASLLGASLLNVVQEKELSCASMVEELLSQI 280
           VLSNNLRA EE TRKLQE YRRE EEGTA  L AS LN VQEKELSCASMVE+LLSQ+
Sbjct: 84  VLSNNLRATEERTRKLQEQYRREGEEGTALFLEASSLNSVQEKELSCASMVEDLLSQV 141

[Close]
BLAST of Lag0012070 vs. ExPASy TrEMBL
Match: A0A6J1F3L3 (uncharacterized protein LOC111442071 OS=Cucurbita moschata OX=3662 GN=LOC111442071 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.2e-39
Identity = 97/118 (82.20%), Postives = 104/118 (88.14%), Query Frame = 0 

Query: 162 DGFVYKRKRRRLDPTEGVATRSSVAQAADLQAEENRRRERRRKTLLKVRAKYQREIEQWE 221
           DGFVYKRKRRRLDP E VA RSSVAQA DL+AEENRRRERRRKTLLKVRAKY+REIEQWE
Sbjct: 24  DGFVYKRKRRRLDPAEAVAARSSVAQAVDLEAEENRRRERRRKTLLKVRAKYRREIEQWE 83

Query: 222 VLSNNLRAMEEMTRKLQELYRREEEEGTASLLGASLLNVVQEKELSCASMVEELLSQI 280
           VLS+NL+AMEE  RKLQE YR+E E G AS L ASLL VVQ KELSCASMVE+LLSQ+
Sbjct: 84  VLSSNLQAMEERARKLQEQYRQEGEVGMASRLEASLLTVVQHKELSCASMVEDLLSQV 141

[Close]
BLAST of Lag0012070 vs. ExPASy TrEMBL
Match: A0A6J1IZN1 (uncharacterized protein LOC111481397 OS=Cucurbita maxima OX=3661 GN=LOC111481397 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.5e-39
Identity = 97/118 (82.20%), Postives = 104/118 (88.14%), Query Frame = 0 

Query: 162 DGFVYKRKRRRLDPTEGVATRSSVAQAADLQAEENRRRERRRKTLLKVRAKYQREIEQWE 221
           DGFVYKRKRRRLDP E VA RSSVAQAADL+AEENRRRERRRKTLLKVRAKY++EIEQWE
Sbjct: 24  DGFVYKRKRRRLDPAEAVAARSSVAQAADLEAEENRRRERRRKTLLKVRAKYRKEIEQWE 83

Query: 222 VLSNNLRAMEEMTRKLQELYRREEEEGTASLLGASLLNVVQEKELSCASMVEELLSQI 280
           VLS+NLRAMEE  RKLQE YR+E E G AS L ASLL  VQ KELSCASMVE+LLSQ+
Sbjct: 84  VLSSNLRAMEERARKLQEQYRQEGEVGMASRLEASLLTEVQHKELSCASMVEDLLSQV 141

[Close]
BLAST of Lag0012070 vs. ExPASy TrEMBL
Match: A0A6J1DE60 (uncharacterized protein LOC111019962 OS=Momordica charantia OX=3673 GN=LOC111019962 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.6e-39
Identity = 96/118 (81.36%), Postives = 104/118 (88.14%), Query Frame = 0 

Query: 162 DGFVYKRKRRRLDPTEGVATRSSVAQAADLQAEENRRRERRRKTLLKVRAKYQREIEQWE 221
           DGFVYKRKRRRLDP E VA RSSVAQAAD++AEENRRRERRRKTLLKVRAKYQREIEQWE
Sbjct: 25  DGFVYKRKRRRLDPAEAVAARSSVAQAADIEAEENRRRERRRKTLLKVRAKYQREIEQWE 84

Query: 222 VLSNNLRAMEEMTRKLQELYRREEEEGTASLLGASLLNVVQEKELSCASMVEELLSQI 280
           VLS NLRAMEE  R+LQE YRRE EEGT  L  AS L+VVQ++ELS ASMVE+LLSQ+
Sbjct: 85  VLSRNLRAMEERNRRLQEQYRREGEEGTVPLAEASSLSVVQQRELSRASMVEDLLSQV 142

[Close]
BLAST of Lag0012070 vs. TAIR 10
Match: AT3G27520.1 (unknown protein; Has 28 Blast hits to 28 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 2.0e-07
Identity = 34/83 (40.96%), Postives = 47/83 (56.63%), Query Frame = 0 

Query: 162 DGFVYKRKRRRLDPTEGVATRSSVAQAADLQAEENRRRERRRKTLLKVRAKYQREIEQWE 221
           DGFVY RK+R     +   T        D   EE  RR R+++ L+K++ KYQ EI+QWE
Sbjct: 22  DGFVYNRKKRTRF-ADAEETSKPPDPELDRVVEERNRRIRKKRLLVKLKRKYQSEIDQWE 81

Query: 222 VLSNNLRAMEEMTRKLQELYRRE 245
           +LSN+  AM+E   + Q   R E
Sbjct: 82  ILSNSFNAMQEKADRFQTAQREE 103

[Close]
BLAST of Lag0012070 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 43.9 bits (102), Expect = 5.9e-04
Identity = 55/210 (26.19%), Postives = 92/210 (43.81%), Query Frame = 0 

Query: 423 PWFISLIRRWECRGSKIYWRESPFVPRLGPSTIRRPTDLLWCCWREMVGTEFEDFCG--D 482
           PW   L R W+ R +++ +R   F  +     +RR  D L   WR  + TE E  CG   
Sbjct: 361 PWL--LWRLWKNR-NELVFRGREFNAQ---EVLRRAEDDLE-EWR--IRTEAES-CGTKP 420

Query: 483 VLGPCKCGEGGDNEVWFPSVFPNYKLNTDIAVNKELYLSSIGTMIRNERGEVMLTLMKLI 542
            +    CG       W P      K NTD   N++     IG ++RNE+GEV     + +
Sbjct: 421 QVNRSSCGR------WRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARAL 480

Query: 543 RYVLDVDVLEVMAIREGLAVVVEAGFSQMEVESDSARVVRRIRSESNECSELGLIVEDIK 602
             +  V   E+ A+R  +  +    ++ +  ESDS +V+  I +       L   ++D++
Sbjct: 481 PKLKSVLEAELEAMRWAVLSLSRFQYNYVIFESDS-QVLIEILNNDEIWPSLKPTIQDLQ 540

Query: 603 SLAGVLSFCSFSWCRRSRNLVAHEIAKAAL 631
            L    +   F +  R  N +A  +A+ +L
Sbjct: 541 RLLSQFTEVKFVFIPREGNTLAERVARESL 553

The following BLAST results are available for this feature:
BLAST of Lag0012070 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022989565.19.3e-4487.29uncharacterized protein LOC111486625 [Cucurbita maxima][more]
KAG6588936.13.9e-4286.44hypothetical protein SDJN03_17501, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022928186.16.7e-4286.44uncharacterized protein LOC111435083 [Cucurbita moschata][more]
XP_023530399.12.2e-4084.75uncharacterized protein LOC111792986 [Cucurbita pepo subsp. pepo][more]
XP_038904940.14.8e-4082.20uncharacterized protein LOC120091144 [Benincasa hispida][more]
BLAST of Lag0012070 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0012070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JMQ64.5e-4487.29uncharacterized protein LOC111486625 OS=Cucurbita maxima OX=3661 GN=LOC111486625... [more]
A0A6J1EJL63.2e-4286.44uncharacterized protein LOC111435083 OS=Cucurbita moschata OX=3662 GN=LOC1114350... [more]
A0A6J1F3L31.2e-3982.20uncharacterized protein LOC111442071 OS=Cucurbita moschata OX=3662 GN=LOC1114420... [more]
A0A6J1IZN11.5e-3982.20uncharacterized protein LOC111481397 OS=Cucurbita maxima OX=3661 GN=LOC111481397... [more]
A0A6J1DE602.6e-3981.36uncharacterized protein LOC111019962 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
BLAST of Lag0012070 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G27520.12.0e-0740.96unknown protein; Has 28 Blast hits to 28 proteins in 10 species: Archae - 0; Bac... [more]
AT4G29090.15.9e-0426.19Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 210..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..125
NoneNo IPR availablePANTHERPTHR33033POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 493..648
NoneNo IPR availablePANTHERPTHR33033:SF67SUBFAMILY NOT NAMEDcoord: 493..648
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 503..635
e-value: 2.2E-10
score: 42.6
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 507..629
e-value: 2.2E-21
score: 76.0
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 506..627
e-value: 4.69084E-16
score: 72.732
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 504..627

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0012070.1Lag0012070.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016757 glycosyltransferase activity
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0004497 monooxygenase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity