Lag0027994.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0027994.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr8: 9575116 .. 9575975 (+)
Sequence length	297
RNA-Seq Expression	Lag0027994.1
Synteny	Lag0027994.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGACCATGACTTTTGAGGTATTGTTATTTCTCCTTAATTTGATTTTATTACTTTCCTTTTGCAATATTTTCCATAATTAGTTTTCTTTCCTTATTTACTTTCTTTTCCAAATATAAAAACCTCCGATTAGACCGGTCATCGCAATAAATCTAAGATAAACAAGTTATAATCGTGCTCCCTGTGTTCGAACCCGACCACTACTGCTAAAGTTAGCTTTAGAGGTTGTGGATTATAAATTTATTTGATAAGAGACATCGACAATCTCTTCCGTCAAATTGGCGCCGTTGCCGGGGAGCCAATTTTAATTTGTTTATAATAGGTTTATTGTGATATCTTCTTTTAATTTGTTTATTTTTAATTAAGTCGATTTTTGATGGCATATCCTTTGAGGAGGGAAAGAGAAGCCCAATTAGTGAAGGAGGTAGGATTGCTCGATAATAAACTATCAATACTAACTTCTTTATGCGAGCAATTAGCGCATCGATATCAAATCAAACAGCCGCATCAACACTATCGACCTTCCAATTCAGGTTAATCTCTTGAGAATCAAATTTATGAGCTTGCTAAAAATATTCTTCAGTTTCAGGAAAGTACTCGAGCTGAGTTGAAAGACATGTCTAATAATATTAATAAGATAGAAGCATATGTTAAAAAACTGGAGAAGCATGTAGAGCAACAAGGACAACTGACCCAAGAGACAATCCTTACAACAGAAGTTCCCTTCATTCCAAAGGTTGATGATGAAGAAATTGAGTGTCCATTTCCATCTCACGATCGACCATGTGAGGTTAAAGAAGAGTCTGAACAAGATTGCAAGGAAATTCAAGTGATAGAGTTTCAGGCTAACGAGTCTTAA

mRNA sequence

ATGGTGACCATGACTTTTGAGTTTCAGGAAAGTACTCGAGCTGAGTTGAAAGACATGTCTAATAATATTAATAAGATAGAAGCATATGTTAAAAAACTGGAGAAGCATGTAGAGCAACAAGGACAACTGACCCAAGAGACAATCCTTACAACAGAAGTTCCCTTCATTCCAAAGGTTGATGATGAAGAAATTGAGTGTCCATTTCCATCTCACGATCGACCATGTGAGGTTAAAGAAGAGTCTGAACAAGATTGCAAGGAAATTCAAGTGATAGAGTTTCAGGCTAACGAGTCTTAA

Coding sequence (CDS)

ATGGTGACCATGACTTTTGAGTTTCAGGAAAGTACTCGAGCTGAGTTGAAAGACATGTCTAATAATATTAATAAGATAGAAGCATATGTTAAAAAACTGGAGAAGCATGTAGAGCAACAAGGACAACTGACCCAAGAGACAATCCTTACAACAGAAGTTCCCTTCATTCCAAAGGTTGATGATGAAGAAATTGAGTGTCCATTTCCATCTCACGATCGACCATGTGAGGTTAAAGAAGAGTCTGAACAAGATTGCAAGGAAATTCAAGTGATAGAGTTTCAGGCTAACGAGTCTTAA

Protein sequence

MVTMTFEFQESTRAELKDMSNNINKIEAYVKKLEKHVEQQGQLTQETILTTEVPFIPKVDDEEIECPFPSHDRPCEVKEESEQDCKEIQVIEFQANES

Homology

The following BLAST results are available for this feature:

BLAST of Lag0027994.1 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0027994.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 16..36

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0027994	Lag0027994	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0027994.1.exon1	Lag0027994.1.exon1	exon
Lag0027994.1.exon2	Lag0027994.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0027994.1	cds.Lag0027994.1	CDS
cds.Lag0027994.1	cds.Lag0027994.1_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0027994.1	Lag0027994.1-protein	polypeptide