Lag0015669 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGGAAATAAGGCAAAAGCCTCCTCTTCAAAGGGCAAAAGCCCAGCTTCCTCTTCTTCAGCACCTCCACCTATGAGTGTTGATCAATATGCTATGGATTTAGGGTTTACTCCTGTAACCCGATCTAGAGCAAGAACGGACGGCATACGTCCAATGTCTCCAATGGAGTCATCCACTCCACCAAGGCCTTCGGTCAACCTAGTCCGTCCTTCTGGCGGTGTTGTTCAATTGAGACCTCCAGTCTCACTAGATTCTAGGATAGGGTCATCACCCCCGTCACCTTCTTCCTATTCTCAGGTTGTTACTCCAGAAAAGAGGTTTGTACCTCGACCTGAGATCAAATCACATTTTCAAAAATCTCTGGATATCACTAAACCCATCATTGAACCAGAATTTCAAGGTCTCAACCTTGAAGAGACCATTTCAAATATGTATCCATCAGGCTTTAACTTTATGCTTGAAGACCTTCAAAAAACAAGAACCTTTTATGAGTTTATATAATTGGAACTCTTTGGGACTCTGAACCTTCAAGTGCACTCGATCACGGGGGATAGTGGAGGCGTACGTTCTAGGCAATAACCACTGCTTGACAAAGTTGAGCCAAGTGTTAGCCTCACACTTCAGGTATGCTGACTGGAATGTTCTTGCCCTCATCCTAGACAACCTCCACTAG ATGAGTGGAAATAAGGCAAAAGCCTCCTCTTCAAAGGGCAAAAGCCCAGCTTCCTCTTCTTCAGCACCTCCACCTATGAGTGTTGATCAATATGCTATGGATTTAGGGTTTACTCCTGTAACCCGATCTAGAGCAAGAACGGACGGCATACGTCCAATGTCTCCAATGGAGTCATCCACTCCACCAAGGCCTTCGGTCAACCTAGTCCGTCCTTCTGGCGGTGTTGTTCAATTGAGACCTCCAGTCTCACTAGATTCTAGGATAGGGTCATCACCCCCGTCACCTTCTTCCTATTCTCAGGTTGTTACTCCAGAAAAGAGGTTTGTACCTCGACCTGAGATCAAATCACATTTTCAAAAATCTCTGGATATCACTAAACCCATCATTGAACCAGAATTTCAAGTGGAGGCGTACGTTCTAGGCAATAACCACTGCTTGACAAAGTTGAGCCAAGTGTTAGCCTCACACTTCAGGTATGCTGACTGGAATGTTCTTGCCCTCATCCTAGACAACCTCCACTAG ATGAGTGGAAATAAGGCAAAAGCCTCCTCTTCAAAGGGCAAAAGCCCAGCTTCCTCTTCTTCAGCACCTCCACCTATGAGTGTTGATCAATATGCTATGGATTTAGGGTTTACTCCTGTAACCCGATCTAGAGCAAGAACGGACGGCATACGTCCAATGTCTCCAATGGAGTCATCCACTCCACCAAGGCCTTCGGTCAACCTAGTCCGTCCTTCTGGCGGTGTTGTTCAATTGAGACCTCCAGTCTCACTAGATTCTAGGATAGGGTCATCACCCCCGTCACCTTCTTCCTATTCTCAGGTTGTTACTCCAGAAAAGAGGTTTGTACCTCGACCTGAGATCAAATCACATTTTCAAAAATCTCTGGATATCACTAAACCCATCATTGAACCAGAATTTCAAGTGGAGGCGTACGTTCTAGGCAATAACCACTGCTTGACAAAGTTGAGCCAAGTGTTAGCCTCACACTTCAGGTATGCTGACTGGAATGTTCTTGCCCTCATCCTAGACAACCTCCACTAG MSGNKAKASSSKGKSPASSSSAPPPMSVDQYAMDLGFTPVTRSRARTDGIRPMSPMESSTPPRPSVNLVRPSGGVVQLRPPVSLDSRIGSSPPSPSSYSQVVTPEKRFVPRPEIKSHFQKSLDITKPIIEPEFQVEAYVLGNNHCLTKLSQVLASHFRYADWNVLALILDNLH Homology
BLAST of Lag0015669 vs. NCBI nr
Match: ADN34145.1 (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 148.3 bits (373), Expect = 6.2e-32 Identity = 85/131 (64.89%), Postives = 100/131 (76.34%), Query Frame = 0
BLAST of Lag0015669 vs. NCBI nr
Match: KAA0043136.1 (putative Retrotransposon protein [Cucumis melo var. makuwa] >TYK23922.1 putative Retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 146.0 bits (367), Expect = 3.1e-31 Identity = 83/131 (63.36%), Postives = 101/131 (77.10%), Query Frame = 0
BLAST of Lag0015669 vs. NCBI nr
Match: KAA0066384.1 (hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa] >TYK00900.1 hypothetical protein E5676_scaffold602G00610 [Cucumis melo var. makuwa]) HSP 1 Score: 141.4 bits (355), Expect = 7.5e-30 Identity = 81/134 (60.45%), Postives = 100/134 (74.63%), Query Frame = 0
BLAST of Lag0015669 vs. NCBI nr
Match: TYK11076.1 (hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]) HSP 1 Score: 141.4 bits (355), Expect = 7.5e-30 Identity = 80/126 (63.49%), Postives = 95/126 (75.40%), Query Frame = 0
BLAST of Lag0015669 vs. NCBI nr
Match: KAA0056175.1 (hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa]) HSP 1 Score: 140.2 bits (352), Expect = 1.7e-29 Identity = 80/126 (63.49%), Postives = 96/126 (76.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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