Lag0015622 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAACCACCCACGATAACACGATCTCAGTAGATAGAGTGATGCTACTCTATTGCATTATGAAGGGGTTGGAGATCAACGTAGGGAACATTATCAGGGATGAGATTTTAGCCTGTGGGAGAAAATGGGCAGGCAAGCTTTTCTTTCGATCGCTTATCACCCAACTCTGCCAAAGGGTGAAGATCGTTCCGGGCAAGGACGAGGAGCGTCACTTCTTCAAGCCGACCATTGACCTGTCCTTGATTGGGAAGCTCCAGCAGAACAACATCCAGAGGAAAGACAAAGCCTCCACATCTCTGGTCACTCCGACATCAGGGTCGAGCATGGCTTCTCCATCCCAGCACAGTTCTTTTACAGGGCCTTCACCGTCATCGGAAGCCCTAGCCATTGCCTACCACCAGCTAGATCAAATTAGGGAGAATCTGAGAACATATTGGGCATATGCAAAGGAGCGGGATGAAGCCATTAGAGAGTTCTACCTCTCTATCGCTCCAAGTATTGCTTCGATCTTTCCCAATTCCCCTTAG ATGCCAACCACCCACGATAACACGATCTCAGTAGATAGAGTGATGCTACTCTATTGCATTATGAAGGGGTTGGAGATCAACGTAGGGAACATTATCAGGGATGAGATTTTAGCCTGTGGGAGAAAATGGGCAGGCAAGCTTTTCTTTCGATCGCTTATCACCCAACTCTGCCAAAGGGTGAAGATCGTTCCGGGCAAGGACGAGGAGCGTCACTTCTTCAAGCCGACCATTGACCTGTCCTTGATTGGGAAGCTCCAGCAGAACAACATCCAGAGGAAAGACAAAGCCTCCACATCTCTGGTCACTCCGACATCAGGGTCGAGCATGGCTTCTCCATCCCAGCACAGTTCTTTTACAGGGCCTTCACCGTCATCGGAAGCCCTAGCCATTGCCTACCACCAGCTAGATCAAATTAGGGAGAATCTGAGAACATATTGGGCATATGCAAAGGAGCGGGATGAAGCCATTAGAGAGTTCTACCTCTCTATCGCTCCAAGTATTGCTTCGATCTTTCCCAATTCCCCTTAG ATGCCAACCACCCACGATAACACGATCTCAGTAGATAGAGTGATGCTACTCTATTGCATTATGAAGGGGTTGGAGATCAACGTAGGGAACATTATCAGGGATGAGATTTTAGCCTGTGGGAGAAAATGGGCAGGCAAGCTTTTCTTTCGATCGCTTATCACCCAACTCTGCCAAAGGGTGAAGATCGTTCCGGGCAAGGACGAGGAGCGTCACTTCTTCAAGCCGACCATTGACCTGTCCTTGATTGGGAAGCTCCAGCAGAACAACATCCAGAGGAAAGACAAAGCCTCCACATCTCTGGTCACTCCGACATCAGGGTCGAGCATGGCTTCTCCATCCCAGCACAGTTCTTTTACAGGGCCTTCACCGTCATCGGAAGCCCTAGCCATTGCCTACCACCAGCTAGATCAAATTAGGGAGAATCTGAGAACATATTGGGCATATGCAAAGGAGCGGGATGAAGCCATTAGAGAGTTCTACCTCTCTATCGCTCCAAGTATTGCTTCGATCTTTCCCAATTCCCCTTAG MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGKLQQNNIQRKDKASTSLVTPTSGSSMASPSQHSSFTGPSPSSEALAIAYHQLDQIRENLRTYWAYAKERDEAIREFYLSIAPSIASIFPNSP Homology
BLAST of Lag0015622 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii]) HSP 1 Score: 87.0 bits (214), Expect = 1.7e-13 Identity = 58/179 (32.40%), Postives = 86/179 (48.04%), Query Frame = 0
BLAST of Lag0015622 vs. NCBI nr
Match: KAF4375842.1 (hypothetical protein G4B88_026421 [Cannabis sativa]) HSP 1 Score: 82.0 bits (201), Expect = 5.5e-12 Identity = 51/153 (33.33%), Postives = 75/153 (49.02%), Query Frame = 0
BLAST of Lag0015622 vs. NCBI nr
Match: MCI09484.1 (hypothetical protein [Trifolium medium]) HSP 1 Score: 79.7 bits (195), Expect = 2.7e-11 Identity = 55/153 (35.95%), Postives = 84/153 (54.90%), Query Frame = 0
BLAST of Lag0015622 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]) HSP 1 Score: 77.4 bits (189), Expect = 1.4e-10 Identity = 50/162 (30.86%), Postives = 80/162 (49.38%), Query Frame = 0
BLAST of Lag0015622 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii]) HSP 1 Score: 77.4 bits (189), Expect = 1.4e-10 Identity = 50/158 (31.65%), Postives = 79/158 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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