Lag0014378 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0014378
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Polyketide_cyc domain-containing protein
Location	chr12: 111541 .. 114134 (+)
RNA-Seq Expression	Lag0014378
Synteny	Lag0014378

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAATATTGAGCACAATCGTATAAAGCTTGCTGGAATAGGTTTCTTCCTTACCCAATTCCGATTTCTTGTTGTTAGACATCCTTCTTGGTTGGATCTTGATTCAAGCTATGATACCAATCTTGGTGGAGCCGAAAGCCTTATGGCGGTATTTTATTAATCTTCCAAAAAAGTGATACAAAAGGGGAAGCCTTAGCCTTTAGATCATCACTTGGTCCAAGATCAGATGTCGAAGAATCTTGTAGTGTAGGACATGTGCCTGAAGGTTCTTGTGGTGGTTGCCTGGAGTATACCTGAGTAATGGGTGGACGAATTTCCCTCTCTGCCCTTCCTAATGTAGGTATTTACTATGAGGGCCTTTACCGTTTATAGAAGAGTAATAAGAGAAGGGTAGAGTGAGCCGGCTCTCTCGAATGGGTTGTGGTGCATTCAGCACCTATCTTCTATAGGGCTGTACAATTTTCTATTGTGCATTCAACCCTTAATTCAATATATTCATAGAGATATCTCATAGTTGTATTATATAATTTTTCTTACCTATGCACGTGACATTGAATTTTAATGCGATCAACTACTTCTATTTACTGTCAGATGCTCTATTCCTTGGCAAATTATAGGAAACACTTGATTTGTGTTCCTGCCACTTGCTTTCATTAATTTTGTCTAATAAGTGAATGAATTAGTATATCTCCACATACGTAGACTTTCTAATTGAAGCTGGTGCTACACATTGAGCTCATTCAGTTGTGGCTTGGTCTCCTCTCTTGTTATCCATTGTTGCATCGGTTGCTAATGCATATTTCTATGTACTAAAATAGTGTTTTTTTTCTAAATTTAAAGATGCTATTTGAAATGAGAAGTATTATTCAATCCTATGGAACTTAAAACCACTTTTGCTTTTCTACATGTCTATGCTTTGACATTCTTTCAATAGGTTGGACAGCAAAACTTGGCCTTTGGTTTGAAATTTAATGCTAAAGGAACCATTGATTGTTATGAGAACGATCTTGAAAGATTTCCTTTTGGTAAAAAGCGAGTTATCAAATTCAAGATGATTGAAGGTGACTTTGAATTCTTTGAGGGTGAATGGTCAATTGAGCAGGTAATTATCCTTAGCATAGATAAAAATTTACATTACTATTCATGTTACAATCATAAGAAATTATATCAGTAGGTTCCCTACATTTCTCTTAATCCTTTTATTTGTTTTTTTTAAAAAAAAAAACTCTTGATCCTTTTATTTATCATTAATACCACGAACCATTAATTTCATAACTATTTTTTTTTAAATTTTAATTTTATTTTTATTTTTATTTTAAAAAAAGTTCGTAACTTGTTGGGGCACATGTCTGCTCTCATACTGTTAAATTAAACTTCTGGCTGAGATTTCCTTTTCATTTATTTCTTCAAGTTTCAATACTCGTGTTTCTTACCTATAAGACCTCCTGCAATATAATAGACTTTAAGCTTTCAGTTTTAATTATTTCATGATTTTACTTTTTGTTGAGTTGCAATCCAGCATTGGTTACATTATGTTTTTGTTAAAAAAAGCAGCCGCCAGATCTGTAATAGCAGATTTTAGAATAGTTACTCGGGGTAGTTGTTAACTACTATAGTTAAAAGAAGAAATTGAGGAAGTTGAAAGTGAATTCGTAGGGGTGACTAATAATGCTGTATTGATATTTCCTGCAACCTAGTGACTGCTAATATATTGAGGCTGATCAATATTTCATCCAAAAGAAAGTAGGATTGTATTGTACTTATAACCTTATCAGAACAGCCAGATCCGTGTATTTGAAGCAAGCTGAACATGATCAGTATACTTTATCCACAAAATAGTCGTTTGATAAGCAAACTGAACATGATCAGTACATTTGGACCAGCTTGAAGGATAGTTCGAAAATAACAATACGAGCGAATGCAAGTTAAACTATTGTAATTTAAGGTAAAAATTAAATTTATGCTGTATAAACAGACAATGTTGTTGTGGTTTGTACTTACCACTTGTATCAAATCATGCGATGCATTTTGTAGATAAGTGAATCATGTGACATTCATGTATATTTAATTGCAACCCACATTACATAGGCGTATTTAATTTGAGGTTTATAATTTGAGATTTATTTGCTCTTACCACTGATTTTATTCCTTAAAATAGCTGGACTGTGTTCGAAAATTCTGCTTAAAAATTAATTACTCTTGCTGACTAGAAAAAATTGTGTTTTTTGCATGGTGATCTGATGCAATACTTACTCTAATCCGTGATCAATAGTTAGGTTGAATGGTTGTTTCCCAGAAACTGCCGGGAATGATTTTTGTCCATTTCTTTTGAGGTTGAAATTTAAACTTGCTGTACAATTTGTCTCATGCTTGTGATTGGTTTTATTGATGCAGTTTGATAAAGATAGGTTCCAAGGTGATGATAACTTGCAATATCAAGAAATACATACAACTCTATCGTATAGGGTTGATGTAAAGCCAAAACTTATGTTGCCCGTTCGGCTTCTTGAGGGTAGGCTTTGTGATGAGATAAAGGTGAACCTAATGTGCATCCGAGAACAAGTATATAAAGTTGGTTCAACCACCCGCTGA

mRNA sequence

ATGTTGAATATTGAGCACAATCGTATAAAGCTTGCTGGAATAGGTTTCTTCCTTACCCAATTCCGATTTCTTGTTGTTAGACATCCTTCTTGGTTGGATCTTGATTCAAGCTATGATACCAATCTTGGTGGAGCCGAAAGCCTTATGGCGGTTGGACAGCAAAACTTGGCCTTTGGTTTGAAATTTAATGCTAAAGGAACCATTGATTGTTATGAGAACGATCTTGAAAGATTTCCTTTTGGTAAAAAGCGAGTTATCAAATTCAAGATGATTGAAGGTGACTTTGAATTCTTTGAGGGTGAATGGTCAATTGAGCAGTTTGATAAAGATAGGTTCCAAGGTGATGATAACTTGCAATATCAAGAAATACATACAACTCTATCGTATAGGGTTGATGTAAAGCCAAAACTTATGTTGCCCGTTCGGCTTCTTGAGGGTAGGCTTTGTGATGAGATAAAGGTGAACCTAATGTGCATCCGAGAACAAGTATATAAAGTTGGTTCAACCACCCGCTGA

Coding sequence (CDS)

ATGTTGAATATTGAGCACAATCGTATAAAGCTTGCTGGAATAGGTTTCTTCCTTACCCAATTCCGATTTCTTGTTGTTAGACATCCTTCTTGGTTGGATCTTGATTCAAGCTATGATACCAATCTTGGTGGAGCCGAAAGCCTTATGGCGGTTGGACAGCAAAACTTGGCCTTTGGTTTGAAATTTAATGCTAAAGGAACCATTGATTGTTATGAGAACGATCTTGAAAGATTTCCTTTTGGTAAAAAGCGAGTTATCAAATTCAAGATGATTGAAGGTGACTTTGAATTCTTTGAGGGTGAATGGTCAATTGAGCAGTTTGATAAAGATAGGTTCCAAGGTGATGATAACTTGCAATATCAAGAAATACATACAACTCTATCGTATAGGGTTGATGTAAAGCCAAAACTTATGTTGCCCGTTCGGCTTCTTGAGGGTAGGCTTTGTGATGAGATAAAGGTGAACCTAATGTGCATCCGAGAACAAGTATATAAAGTTGGTTCAACCACCCGCTGA

Protein sequence

MLNIEHNRIKLAGIGFFLTQFRFLVVRHPSWLDLDSSYDTNLGGAESLMAVGQQNLAFGLKFNAKGTIDCYENDLERFPFGKKRVIKFKMIEGDFEFFEGEWSIEQFDKDRFQGDDNLQYQEIHTTLSYRVDVKPKLMLPVRLLEGRLCDEIKVNLMCIREQVYKVGSTTR

Homology

[Close]

BLAST of Lag0014378 vs. NCBI nr
Match: XP_022158713.1 (uncharacterized protein LOC111025172 isoform X1 [Momordica charantia])

HSP 1 Score: 215.7 bits (548), Expect = 3.1e-52
Identity = 105/122 (86.07%), Postives = 108/122 (88.52%), Query Frame = 0


Query: 48  LMAVGQQNLAFGLKFNAKGTIDCYENDLERFPFGKKRVIKFKMIEGDFEFFEGEWSIEQF 107
           L  VGQQNLAFGLKFNAKGTIDCYE DLER PFGKKRVIKFKMIEGDFE FEGEWSIEQF
Sbjct: 181 LFQVGQQNLAFGLKFNAKGTIDCYEKDLERLPFGKKRVIKFKMIEGDFELFEGEWSIEQF 240

Query: 108 DKDRFQGDDNLQYQEIHTTLSYRVDVKPKLMLPVRLLEGRLCDEIKVNLMCIREQVYKVG 167
           DKDR Q DDNLQ QE HTTL Y VDVKPKL+LPVRLLEGRLCDEIKVNL CIRE+V+K  
Sbjct: 241 DKDRCQDDDNLQEQETHTTLYYSVDVKPKLLLPVRLLEGRLCDEIKVNLTCIREEVHKAN 300

Query: 168 ST 170
           ST
Sbjct: 301 ST 302

[Close]

BLAST of Lag0014378 vs. NCBI nr
Match: XP_023006623.1 (uncharacterized protein LOC111499296 [Cucurbita maxima])

HSP 1 Score: 205.3 bits (521), Expect = 4.2e-49
Identity = 99/128 (77.34%), Postives = 108/128 (84.38%), Query Frame = 0


Query: 43  GGAESLMAVGQQNLAFGLKFNAKGTIDCYENDLERFPFGKKRVIKFKMIEGDFEFFEGEW 102
           G    L  VGQQNLAFG KFNAKGTIDCYENDLE  P GK+RVIKFKMIEGDF  FEGEW
Sbjct: 169 GNHARLFQVGQQNLAFGFKFNAKGTIDCYENDLEILPSGKRRVIKFKMIEGDFALFEGEW 228

Query: 103 SIEQFDKDRFQGDDNLQYQEIHTTLSYRVDVKPKLMLPVRLLEGRLCDEIKVNLMCIREQ 162
           SIEQFD+DR + D NLQ QE++T LSYRVDVKPKLMLPVRL+EGRLCDEIK+NLMCIRE+
Sbjct: 229 SIEQFDEDRLEDDGNLQDQELNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREE 288

Query: 163 VYKVGSTT 171
            +K  STT
Sbjct: 289 AHKTSSTT 296

[Close]

BLAST of Lag0014378 vs. NCBI nr
Match: XP_008458275.1 (PREDICTED: uncharacterized protein LOC103497743 [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 6.1e-48
Identity = 98/129 (75.97%), Postives = 108/129 (83.72%), Query Frame = 0


Query: 42  LGGAESLMAVGQQNLAFGLKFNAKGTIDCYENDLERFPFGKKRVIKFKMIEGDFEFFEGE 101
           +G    L  VG+QNLAFG KFNAKGTIDCYENDLER PFGK+RVIKFKMIEGDFE FEGE
Sbjct: 173 IGNHARLFQVGEQNLAFGFKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGE 232

Query: 102 WSIEQFDKDRFQGDDNLQYQEIHTTLSYRVDVKPKLMLPVRLLEGRLCDEIKVNLMCIRE 161
           WSIEQF +D    DD+ Q QE+H+TLSY VDVKPKL+LPVRLLEGRLC EIK NLMCIRE
Sbjct: 233 WSIEQFGED----DDSFQDQEVHSTLSYSVDVKPKLLLPVRLLEGRLCSEIKANLMCIRE 292

Query: 162 QVYKVGSTT 171
           +V+K  STT
Sbjct: 293 EVHKTSSTT 297

[Close]

BLAST of Lag0014378 vs. NCBI nr
Match: XP_022959182.1 (uncharacterized protein LOC111460246 isoform X2 [Cucurbita moschata])

HSP 1 Score: 201.1 bits (510), Expect = 7.9e-48
Identity = 97/128 (75.78%), Postives = 106/128 (82.81%), Query Frame = 0


Query: 43  GGAESLMAVGQQNLAFGLKFNAKGTIDCYENDLERFPFGKKRVIKFKMIEGDFEFFEGEW 102
           G    L  VGQQNLAFG KFNAKGTIDCYENDLE  P GK+RVIKFKMIEGDF  FEGEW
Sbjct: 169 GNHARLFQVGQQNLAFGFKFNAKGTIDCYENDLEILPSGKRRVIKFKMIEGDFALFEGEW 228

Query: 103 SIEQFDKDRFQGDDNLQYQEIHTTLSYRVDVKPKLMLPVRLLEGRLCDEIKVNLMCIREQ 162
           SIEQFD+DR + D N Q QE +T LSYRVDVKPKLMLP+RL+EGRLCDEIK+NLMCIRE+
Sbjct: 229 SIEQFDEDRLKDDGNSQDQEANTILSYRVDVKPKLMLPIRLIEGRLCDEIKLNLMCIREE 288

Query: 163 VYKVGSTT 171
            +K  STT
Sbjct: 289 AHKTSSTT 296

[Close]

BLAST of Lag0014378 vs. NCBI nr
Match: XP_023548259.1 (uncharacterized protein LOC111806945 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 201.1 bits (510), Expect = 7.9e-48
Identity = 96/128 (75.00%), Postives = 107/128 (83.59%), Query Frame = 0


Query: 43  GGAESLMAVGQQNLAFGLKFNAKGTIDCYENDLERFPFGKKRVIKFKMIEGDFEFFEGEW 102
           G    L  VGQQNLAFG KFNAKGTIDCYENDLE  P G++RVIKFKMIEGDF  FEGEW
Sbjct: 170 GNHARLFQVGQQNLAFGFKFNAKGTIDCYENDLEILPSGRRRVIKFKMIEGDFALFEGEW 229

Query: 103 SIEQFDKDRFQGDDNLQYQEIHTTLSYRVDVKPKLMLPVRLLEGRLCDEIKVNLMCIREQ 162
           SIEQFD+DR + D N Q Q+++T LSYRVDVKPKLMLPVRL+EGRLCDEIK+NLMCIRE+
Sbjct: 230 SIEQFDEDRLEDDGNSQDQDVNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREE 289

Query: 163 VYKVGSTT 171
            +K  STT
Sbjct: 290 AHKTSSTT 297

The following BLAST results are available for this feature:

BLAST of Lag0014378 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158713.1	3.1e-52	86.07	uncharacterized protein LOC111025172 isoform X1 [Momordica charantia]	[more]
XP_023006623.1	4.2e-49	77.34	uncharacterized protein LOC111499296 [Cucurbita maxima]	[more]
XP_008458275.1	6.1e-48	75.97	PREDICTED: uncharacterized protein LOC103497743 [Cucumis melo]	[more]
XP_022959182.1	7.9e-48	75.78	uncharacterized protein LOC111460246 isoform X2 [Cucurbita moschata]	[more]
XP_023548259.1	7.9e-48	75.00	uncharacterized protein LOC111806945 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lag0014378 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023393	START-like domain superfamily	GENE3D	3.30.530.20		coord: 56..164 e-value: 9.7E-7 score: 30.6
IPR005031	Coenzyme Q-binding protein COQ10, START domain	PFAM	PF03364	Polyketide_cyc	coord: 54..159 e-value: 4.6E-12 score: 46.3
None	No IPR available	PANTHER	PTHR34060:SF1	POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN	coord: 47..168
None	No IPR available	PANTHER	PTHR34060	POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN	coord: 47..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0014378.1	Lag0014378.1	mRNA