Lag0021937 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0021937
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Protein kinase domain-containing protein
Location	chr7: 14207314 .. 14207873 (+)
RNA-Seq Expression	Lag0021937
Synteny	Lag0021937

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTATTTGCACAATTTATCATCAAGGTACAGTAACTAAATGAGAAATATATATATATATATATATATATATATGCAGATGATAAGAAAAATGTGTGCTTGCATTATGAACATTTTTCTTCATAGTTTGAAAATGAGCAAAAAAAAAAAAAAAAAAAGAATTGTTTAAGGCTACTCCTTAAGGCTTTACATCTAACCATCTGGAGAATTTTGCAATGCAGAATATGGTTTTGGAGAAAATCCAACAACAGTAGGAGATGTGTATAGTTTTGGAGTGACATTGCTAAAACTTTTTACATGGAAAAGTCCAACAGATGAATATTTCACTGGAGAAGTGAATTTAGTGAAGTGGGTGGAGTCATGTTTCCCAGAAGATGTGATGGAAGTGATAGATTTCAAGTTGTCAAAAGTTTGTGTGAATTTGGAGTATGAGAGTCGAATGATAAGTTTAGATATGTCATTGAATTGTTTGATCAAAGTGATTGGAGTGGCACTCGCTTGCACTATGAATTCTCCGAAAAACTGCATGAACATCAAAGATGCCCTTTTGAAGCTTTAG

mRNA sequence

ATGTGTATTTGCACAATTTATCATCAAGAATATGGTTTTGGAGAAAATCCAACAACAGTAGGAGATGTGTATAGTTTTGGAGTGACATTGCTAAAACTTTTTACATGGAAAAGTCCAACAGATGAATATTTCACTGGAGAAGTGAATTTAGTGAAGTGGGTGGAGTCATGTTTCCCAGAAGATGTGATGGAAGTGATAGATTTCAAGTTGTCAAAAGTTTGTGTGAATTTGGAGTATGAGAGTCGAATGATAAGTTTAGATATGTCATTGAATTGTTTGATCAAAGTGATTGGAGTGGCACTCGCTTGCACTATGAATTCTCCGAAAAACTGCATGAACATCAAAGATGCCCTTTTGAAGCTTTAG

Coding sequence (CDS)

ATGTGTATTTGCACAATTTATCATCAAGAATATGGTTTTGGAGAAAATCCAACAACAGTAGGAGATGTGTATAGTTTTGGAGTGACATTGCTAAAACTTTTTACATGGAAAAGTCCAACAGATGAATATTTCACTGGAGAAGTGAATTTAGTGAAGTGGGTGGAGTCATGTTTCCCAGAAGATGTGATGGAAGTGATAGATTTCAAGTTGTCAAAAGTTTGTGTGAATTTGGAGTATGAGAGTCGAATGATAAGTTTAGATATGTCATTGAATTGTTTGATCAAAGTGATTGGAGTGGCACTCGCTTGCACTATGAATTCTCCGAAAAACTGCATGAACATCAAAGATGCCCTTTTGAAGCTTTAG

Protein sequence

MCICTIYHQEYGFGENPTTVGDVYSFGVTLLKLFTWKSPTDEYFTGEVNLVKWVESCFPEDVMEVIDFKLSKVCVNLEYESRMISLDMSLNCLIKVIGVALACTMNSPKNCMNIKDALLKL

Homology

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BLAST of Lag0021937 vs. NCBI nr
Match: XP_022132281.1 (putative receptor-like protein kinase At3g47110 [Momordica charantia])

HSP 1 Score: 178.7 bits (452), Expect = 3.0e-41
Identity = 87/112 (77.68%), Postives = 97/112 (86.61%), Query Frame = 0


Query: 10  EYGFGENPTTVGDVYSFGVTLLKLFTWKSPTDEYFTGEVNLVKWVESCFPEDVMEVIDFK 69
           EYGFG  PTT GDVYSFGVTLL+LFT KSPTDEYFTGE NLVKWVESCFP DVMEVIDFK
Sbjct: 886 EYGFGVKPTTAGDVYSFGVTLLELFTGKSPTDEYFTGEQNLVKWVESCFPADVMEVIDFK 945

Query: 70  LSKVCVNLEYESRMISLDMSLNCLIKVIGVALACTMNSPKNCMNIKDALLKL 122
           LSK+C++LEYE  +ISLD   +CLIKVIGVAL CTMNSP N +++KDA+ KL
Sbjct: 946 LSKLCMDLEYERHIISLDKQKDCLIKVIGVALLCTMNSPTNRIDMKDAVSKL 997

[Close]

BLAST of Lag0021937 vs. NCBI nr
Match: XP_022131467.1 (putative receptor-like protein kinase At3g47110 [Momordica charantia])

HSP 1 Score: 171.8 bits (434), Expect = 3.6e-39
Identity = 83/112 (74.11%), Postives = 97/112 (86.61%), Query Frame = 0


Query: 10  EYGFGENPTTVGDVYSFGVTLLKLFTWKSPTDEYFTGEVNLVKWVESCFPEDVMEVIDFK 69
           EYGFG  PTT GDVYSFGVTLL+LFT KSPTDE FTG++NLVKWVESCFPEDVM+VIDFK
Sbjct: 886 EYGFGVKPTTAGDVYSFGVTLLELFTGKSPTDESFTGDLNLVKWVESCFPEDVMKVIDFK 945

Query: 70  LSKVCVNLEYESRMISLDMSLNCLIKVIGVALACTMNSPKNCMNIKDALLKL 122
           L ++CV+ EYE R+IS DM  +CLIKVIGVAL+CT+NSP +  +IKDA+ KL
Sbjct: 946 LLELCVDFEYEGRVISSDMHKDCLIKVIGVALSCTVNSPASRTDIKDAVAKL 997

[Close]

BLAST of Lag0021937 vs. NCBI nr
Match: XP_023002895.1 (probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Cucurbita maxima])

HSP 1 Score: 163.7 bits (413), Expect = 9.9e-37
Identity = 78/112 (69.64%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 10  EYGFGENPTTVGDVYSFGVTLLKLFTWKSPTDEYFTGEVNLVKWVESCFPEDVMEVIDFK 69
           EYG+G   T  GDVYSFGVTLL+LFT K+PTDEYFTGE+NLVKWVESCFP D+MEVIDFK
Sbjct: 881 EYGYGVKATKAGDVYSFGVTLLELFTGKNPTDEYFTGELNLVKWVESCFPNDLMEVIDFK 940

Query: 70  LSKVCVNLEYESRMISLDMSLNCLIKVIGVALACTMNSPKNCMNIKDALLKL 122
           LSK+CV+L+YE+++I+ D    CLI+ I VAL+CT+NSP N ++IKDAL KL
Sbjct: 941 LSKLCVDLKYENQIINSDKQKGCLIQTIEVALSCTVNSPTNRIDIKDALSKL 992

[Close]

BLAST of Lag0021937 vs. NCBI nr
Match: KAG6585692.1 (putative LRR receptor-like serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 163.3 bits (412), Expect = 1.3e-36
Identity = 78/112 (69.64%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 10  EYGFGENPTTVGDVYSFGVTLLKLFTWKSPTDEYFTGEVNLVKWVESCFPEDVMEVIDFK 69
           EYG+G   T  GDVYSFGVTLL+LFT K+PTDEYFTGE+NLVKWVESCFP D+MEVIDFK
Sbjct: 881 EYGYGVKATKAGDVYSFGVTLLELFTGKNPTDEYFTGELNLVKWVESCFPNDLMEVIDFK 940

Query: 70  LSKVCVNLEYESRMISLDMSLNCLIKVIGVALACTMNSPKNCMNIKDALLKL 122
           LSK+CV+L++E+++I+ D    CLI+ I VAL+CTMNSP N ++IKDAL KL
Sbjct: 941 LSKLCVDLKHENQIINSDKQKGCLIQTIEVALSCTMNSPTNRIDIKDALSKL 992

[Close]

BLAST of Lag0021937 vs. NCBI nr
Match: XP_038886079.1 (probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Benincasa hispida])

HSP 1 Score: 162.5 bits (410), Expect = 2.2e-36
Identity = 78/112 (69.64%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 10  EYGFGENPTTVGDVYSFGVTLLKLFTWKSPTDEYFTGEVNLVKWVESCFPEDVMEVIDFK 69
           EYGFG  PTT GDVYSFGVTLL+LFT KSPTDEYFTGE+NL+KWVES +PED+MEVID K
Sbjct: 884 EYGFGVKPTTAGDVYSFGVTLLELFTGKSPTDEYFTGELNLIKWVESSYPEDIMEVIDHK 943

Query: 70  LSKVCVNLEYESRMISLDMSLNCLIKVIGVALACTMNSPKNCMNIKDALLKL 122
           L ++CV+LEYE   ISL+M  +CLIKVI VAL+CT+N+P N +++ DA+ KL
Sbjct: 944 LLELCVDLEYEGLTISLEMQKDCLIKVIEVALSCTVNTPVNRIDMVDAVSKL 995

[Close]

BLAST of Lag0021937 vs. ExPASy Swiss-Prot
Match: C0LGP4 (Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-11
Identity = 36/101 (35.64%), Postives = 54/101 (53.47%), Query Frame = 0


Query: 10  EYGFGENPTTVGDVYSFGVTLLKLFTWKSPTDEYFTGEVNLVKWVESCFPEDVMEVIDFK 69
           EYG G  P+  GDVYSFG+ LL++FT K PT+E F G   L  + +S  PE +++++D  
Sbjct: 891 EYGVGGQPSINGDVYSFGILLLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVDES 950

Query: 70  LSKVCVNLEYESRMISLDMSLNCLIKVIGVALACTMNSPKN 111
           +  + + + +          + CL  V  V L C   SP N
Sbjct: 951 ILHIGLRVGFP--------VVECLTMVFEVGLRCCEESPMN 983

[Close]

BLAST of Lag0021937 vs. ExPASy Swiss-Prot
Match: Q9SD62 (Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana OX=3702 GN=At3g47110 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.1e-09
Identity = 34/113 (30.09%), Postives = 61/113 (53.98%), Query Frame = 0


Query: 10   EYGFGENPTTVGDVYSFGVTLLKLFTWKSPTDEYFTGEVNLVKWVESCFPE-DVMEVIDF 69
            EYG G +P+ +GDVYSFG+ LL++FT K PT++ F   + L  + +S   +   +++ D 
Sbjct: 908  EYGMGGHPSIMGDVYSFGIVLLEIFTGKRPTNKLFVDGLTLHSFTKSALQKRQALDITDE 967

Query: 70   KLSKVCVNLEYESRMISLDMSLNCLIKVIGVALACTMNSPKNCMNIKDALLKL 122
             + +      +          + CL  V  V ++C+  SP N +++ +A+ KL
Sbjct: 968  TILRGAYAQHFN--------MVECLTLVFRVGVSCSEESPVNRISMAEAISKL 1012

[Close]

BLAST of Lag0021937 vs. ExPASy Swiss-Prot
Match: C0LGT6 (LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana OX=3702 GN=EFR PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.9e-08
Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 10  EYGFGENPTTVGDVYSFGVTLLKLFTWKSPTDEYFTGEVNLVKWVES 57
           EYG G  P+  GDVYSFG+ LL++F+ K PTDE F G+ NL  + +S
Sbjct: 901 EYGMGGQPSIQGDVYSFGILLLEMFSGKKPTDESFAGDYNLHSYTKS 947

[Close]

BLAST of Lag0021937 vs. ExPASy Swiss-Prot
Match: Q2R2D5 (Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. japonica OX=39947 GN=XA21 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.5e-07
Identity = 30/99 (30.30%), Postives = 51/99 (51.52%), Query Frame = 0


Query: 10   EYGFGENPTTVGDVYSFGVTLLKLFTWKSPTDEYFTGEVNLVKWVESCFPEDVMEVIDFK 69
            EYG G   +T GD+YS+G+ +L++ T K PTD  F  ++ L ++VE      V +V+D K
Sbjct: 905  EYGVGHIASTHGDIYSYGILVLEIVTGKRPTDSTFRPDLGLRQYVELGLHGRVTDVVDTK 964

Query: 70   LSKVCVNLEYESRMISLDMSLNCLIKVIGVALACTMNSP 109
            L     N    +          C++ ++ + L+C+   P
Sbjct: 965  LILDSENWLNSTNNSPCRRITECIVSLLRLGLSCSQVLP 1003

[Close]

BLAST of Lag0021937 vs. ExPASy Swiss-Prot
Match: Q1MX30 (Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-06
Identity = 30/101 (29.70%), Postives = 52/101 (51.49%), Query Frame = 0


Query: 10  EYGFGENPTTVGDVYSFGVTLLKLFTWKSPTDEYFTGEVNLVKWVESCFPEDVMEVIDFK 69
           EYG G   +T GD+YS+G+ +L++ T K PTD  F  ++ L ++VE      V +V+D K
Sbjct: 893 EYGVGLIASTHGDIYSYGILVLEIVTGKRPTDSTFRPDLGLRQYVELGLHGRVTDVVDTK 952

Query: 70  LSKVCVNLEYESRMISLDMSLNCLIKVIGVALACTMNSPKN 111
           L     N    +          C++ ++ + L+C+   P +
Sbjct: 953 LILDSENWLNSTNNSPCRRITECIVWLLRLGLSCSQELPSS 993

The following BLAST results are available for this feature:

BLAST of Lag0021937 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132281.1	3.0e-41	77.68	putative receptor-like protein kinase At3g47110 [Momordica charantia]	[more]
XP_022131467.1	3.6e-39	74.11	putative receptor-like protein kinase At3g47110 [Momordica charantia]	[more]
XP_023002895.1	9.9e-37	69.64	probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Cucurbita ...	[more]
KAG6585692.1	1.3e-36	69.64	putative LRR receptor-like serine/threonine-protein kinase, partial [Cucurbita a...	[more]
XP_038886079.1	2.2e-36	69.64	probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Benincasa ...	[more]

BLAST of Lag0021937 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C0LGP4	1.1e-11	35.64	Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidop...	[more]
Q9SD62	9.1e-09	30.09	Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana OX=3702 ...	[more]
C0LGT6	5.9e-08	53.19	LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana OX...	[more]
Q2R2D5	6.5e-07	30.30	Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. japonica OX=39947 GN=XA...	[more]
Q1MX30	1.1e-06	29.70	Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 5..121 e-value: 1.1E-14 score: 56.4
None	No IPR available	PANTHER	PTHR27008:SF357	PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED	coord: 9..119
None	No IPR available	PANTHER	PTHR27008	OS04G0122200 PROTEIN	coord: 9..119
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 10..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0021937.1	Lag0021937.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004674	protein serine/threonine kinase activity