Release note (April, 2022)

Version 2 of Cucurbit Genomics Database (CuGenDBv2; http://cucurbitgenomics.org/v2) includes the latest versions of 33 cucurbit genome assemblies. The list of these genome assemblies is provided here.

Protein-coding genes of the 33 cucurbit genomes were functionally annotated.

Pathways were predicted for each of the 33 cucurbit genomes.

RNA-Seq raw reads were downloaded from NCBI SRA and processed to derive gene expression values for each gene in the database. Here is an example (cucumber Chinese Long gene CsaV3_4G023380)

Synteny blocks were identified between and within the 33 cucurbit genomes.