ClCG06G016280 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTTCCTTTCCCTTTGCCTACCTTTTCCTCGTTTTTCTTTTTCCCTCTGGAAAGTTCGTAACACTAAACAGTTTATATAAAGTTATAAACAGAGAGATGGTGAGAGTTTTTACCAAACCTCCCATTGGTTTATCCGCTAATTTCCTTTTTTATCACTTCACTTCAGCACTTGTTTGATGATTAAGGCGCGAAGTTCCAATCTTTCCAGTCACTCTCTTTCTGGGCTACCGAACCGGACAGAACGCAAGAGCCCCCTTTACGAGGAATTGATTATCCAGAAGCTTCAGATCAAACGGAGAACGGGAACTGGTCTACAATCCATTGACCGACGCTAAATGGGATCTGGGGCGGGCAGTTTTTTCAAGGTCATCCTCAAAAACTTCGATGTTCTTGCCGGGTATGTTTCTCTTCTCTTGATTTTGATTATCCCAGAAGAGGGATCGTTTTTTCTCTGAGGGTGGGCCTTAACTTTGCCATGGCGGACTAGAAAACTTCTTTACACTAATTCTCTGTTAACCTTAATATCATCTGTTCATGAACGATCAAGTTAGCTTCCTGTTTAGTGGAAGGAATAATCCGAACCCCCAAACTCGTGTTCTCAGAAGAAAGCTTCCCAATAACCCTCAGTTGCAGCCTGGGCTGTGCCACCAATTTGTGTTTGCTAGGGCTCCGGGTTAGGAGGGATGGGTTCTGAAATGTACTGTAGCCACGAGTAGAAAATTGATATTAACTCTGTTTACTCAGTCAGCATTAGTTGGGGCTCTGAGAACTGACATAAAGCTTTGTTTACTGTAGATCTGAGGCCTTGTCATTGTTAGGTATTGTAGGCTGTGGCCCAACTAAATCTATCATGACATAGTGAAGGATCTTGAACACTCTGTGCAGTTCCATTAGTTAAGGACTTGGTTTTGCTGTTGAATATTTCAGTTTTTGCTAGTGGATCTCGAGTATATTTGGTCTGAGAAAGATGAACACTCATCACTGCAATTTACCTCAAAACCAAGAATGTAGCTCTTTGATCCAAGAGTTTGGAGAGCATTAGTCAGCTGGATTCTGAATTGGTAACTTGAACCTTAGCTTGTGAGAACCCAGTAATTAGAGTATTATCAACATACACGTAAAGAAAAATAGAATAATGAGTGGATTTATATCAATTAAACTAGGCTCTACTCTTGGACCTTCACAATGACCATGCAAGGCATTGTGTAGTTTACTCATCACACATGTAATCTTCCTGTCAAGGGACTAAGAAACCAGCTAGTTGTTTTGTTTCATACTACCAATAACCAATTAACTGTATTATTTAACAGAACAAGACTCCCATCGTAGAGGCTTCACAACAGGACTAATTATATAAAATTAATCAACACCTGGAGTTTGTTGAAACCCGTAGGTAACCAAACAAACCTTGGACCTATTAACTGTTTGTCCATCAAGACATCCATTTTAACCTAAAAAAGGTCTGCCTGCATACCTGAGGAGCAACTGCAAGTTTGATGCAGAGGACCGAGCAGGTGGAAGACCTGGACAGCCGGGGAAAGTCAAATTAAGAGCATAGAATTGAATCTCATCGTGTCGCTGATTATGCACCACTATAGTTTCGTGTTCTGACTAATGCAGCCATATAATAAGCCCAAAAATTTACGCACTTACTCATGAATAAGGAAATGGGAGGGATAGAAGAGTAAAAGAGCGTGAAGGTTGTTATAACTGAGCGGGTGACGGATAGGAATGGGAAAATGGTTAGAGTACGGAAGAAATGTAAAGCAGCAGAGAAAATTGAATTTGGAAAAATGATTGGCTAATCATTGGAAAAAATCCAGGTAGAGAGGGGAGACTTTTCATATGCCTACTTCAACTATTTTCTTTTCCACTCTATTTAAAAGATTTTCTGATGGCTATCAGCATCATGTAAGTGCACACCACCAAATTCTTAACTTCATTCCTGGGTTTTGTTTGCAGGCCTCTTGTGAGTCTTGTTTATCCTCTGTAAGTGGTTCTGCTTCTTTGTTTAACTTTCTGTCCTTTTCTTTAATGACACCTTTGGAGTTTGGACTGTTTGACAGTCACATCCCAAAATTGTAGCTCCAATATTTTCTATTTGGCAGATATGCATCAGTAAGAGCCATAGAAACAAAGTCTCCTGTGGACGATCAGCAATGGCTTACTTACTGGATTCTATATTCTATGCTCACCCTCTTTGAGCTGACATTTGCAAAAGTTCTTGAATGGTAAATTTGCTTCTTTTAGAAATCGCATTTTGCTCGTTTTATCATACTGTTCTGTGGTTTGCAATTTGTGAAAATAAAGGCTCTCTCTCAAGTCTATATGTGAGTTCTTTTTTCTCCTTCAACTGATGTTAGTTAATTTGCTAGAGATTAGGACTTGGAATTTCAAATCCCATATGATTATTATAATTTGATTCTTGAATAATTTTCACATAAATGTTGTTACTTTTTTGGTCTAATCTTGAAATGCTGGTATTATTATTTATTTTTATATTTGGTGCATCTAAAATTTGAAGCTAGTTTGTTTTGTTATCTTGGCCTTGTTCTGGATGATTTTAGTATGTACATTTCAAGATTATGTGGGTCTGCTTGCAATGGTTTTTTTACATATCGGATGATTCAAGTATCCCTCCTGTACTTCATATACTTTTCATTTTTGAAGTTTTCTAACCCAATCCTTTATTGAAAGTGTTTTCTTACACTAATATGTTGATATTTTATTAGAACTGGTTAAAAGTCACTGATGAAGTTCCAATTTTCCCCATTAAATCTTTACATAGGATCCCTATCTGGCCATATGCAAAGTTGATTTTGTCATGCTGGTTGGTCATTCCATACTTCAGTGGTGCTGCATATGTGTACGAGCATTTCGTGAGGCCTCTATTCGTCAACAAACAGACAGTTAACATTTGGTATGTTCCAAAGATGAAGGACTTCTTCAGCAAGCCCGATGACATCCTAACCGCTGCAGAGAAGTACATTGCAGAAAATGGAACTGCAGACCTCCAAAATATCATTAACAGGGTATATACACTGATCAATCTCAAGTGGTTGCTTTAAAATAATTCTGAATTTGTGTTGGTATGAATGACTCCATACAAGCGTACACAAGCAACCTATCAATTAGTTCAACTGACCTTGCTTATACATATGAATGTTTTTTCATTTCGTTTCTGTAGGCTGATAAGGCTCGGACAAGTAGTCGTTACATGAGCTATTCTGAGGACCATGACCATGACCACAACTACAACCACGATTACTGGCACTAGTCTAAATCAAGTGTTGGAGGGCAAGAGAGGATGATCTTTTGGCTGTCAGTTGATGATGTGTGATAACGTATATTTATATGTTTTGTATTGTTCATATTTTCACTAGGCACTCTGTGTAAGTATAAGATATTTACTTCTAAGTAGTTGGTCTAATATTATTATGGCTAATGTCTTGTTTGTTCTTCCCCTCAGATTTGACTTAACTTATGGTTGGAGAGTAAGTGTTCAGCTAGTTTGTTGTGCTTTCTCAGGAAGTAATTGATTGCTACTTATATC TTTTTTTTCCTTTCCCTTTGCCTACCTTTTCCTCGTTTTTCTTTTTCCCTCTGGAAAGTTCGTAACACTAAACAGTTTATATAAAGTTATAAACAGAGAGATGGTGAGAGTTTTTACCAAACCTCCCATTGGTTTATCCGCTAATTTCCTTTTTTATCACTTCACTTCAGCACTTGTTTGATGATTAAGGCGCGAAGTTCCAATCTTTCCAGTCACTCTCTTTCTGGGCTACCGAACCGGACAGAACGCAAGAGCCCCCTTTACGAGGAATTGATTATCCAGAAGCTTCAGATCAAACGGAGAACGGGAACTGGTCTACAATCCATTGACCGACGCTAAATGGGATCTGGGGCGGGCAGTTTTTTCAAGGTCATCCTCAAAAACTTCGATGTTCTTGCCGGGCCTCTTGTGAGTCTTGTTTATCCTCTATATGCATCAGTAAGAGCCATAGAAACAAAGTCTCCTGTGGACGATCAGCAATGGCTTACTTACTGGATTCTATATTCTATGCTCACCCTCTTTGAGCTGACATTTGCAAAAGTTCTTGAATGGCTCTCTCTCAAGTCTATATGTGAGTTCTTTTTTCTCCTTCAACTGATGATCCCTATCTGGCCATATGCAAAGTTGATTTTGTCATGCTGGTTGGTCATTCCATACTTCAGTGGTGCTGCATATGTGTACGAGCATTTCGTGAGGCCTCTATTCGTCAACAAACAGACAGTTAACATTTGGTATGTTCCAAAGATGAAGGACTTCTTCAGCAAGCCCGATGACATCCTAACCGCTGCAGAGAAGTACATTGCAGAAAATGGAACTGCAGACCTCCAAAATATCATTAACAGGGCTGATAAGGCTCGGACAAGTAGTCGTTACATGAGCTATTCTGAGGACCATGACCATGACCACAACTACAACCACGATTACTGGCACTAGTCTAAATCAAGTGTTGGAGGGCAAGAGAGGATGATCTTTTGGCTGTCAGTTGATGATGTGTGATAACGTATATTTATATGTTTTGTATTGTTCATATTTTCACTAGGCACTCTGTGTAAGTATAAGATATTTACTTCTAAGTAGTTGGTCTAATATTATTATGGCTAATGTCTTGTTTGTTCTTCCCCTCAGATTTGACTTAACTTATGGTTGGAGAGTAAGTGTTCAGCTAGTTTGTTGTGCTTTCTCAGGAAGTAATTGATTGCTACTTATATC ATGGGATCTGGGGCGGGCAGTTTTTTCAAGGTCATCCTCAAAAACTTCGATGTTCTTGCCGGGCCTCTTGTGAGTCTTGTTTATCCTCTATATGCATCAGTAAGAGCCATAGAAACAAAGTCTCCTGTGGACGATCAGCAATGGCTTACTTACTGGATTCTATATTCTATGCTCACCCTCTTTGAGCTGACATTTGCAAAAGTTCTTGAATGGCTCTCTCTCAAGTCTATATGTGAGTTCTTTTTTCTCCTTCAACTGATGATCCCTATCTGGCCATATGCAAAGTTGATTTTGTCATGCTGGTTGGTCATTCCATACTTCAGTGGTGCTGCATATGTGTACGAGCATTTCGTGAGGCCTCTATTCGTCAACAAACAGACAGTTAACATTTGGTATGTTCCAAAGATGAAGGACTTCTTCAGCAAGCCCGATGACATCCTAACCGCTGCAGAGAAGTACATTGCAGAAAATGGAACTGCAGACCTCCAAAATATCATTAACAGGGCTGATAAGGCTCGGACAAGTAGTCGTTACATGAGCTATTCTGAGGACCATGACCATGACCACAACTACAACCACGATTACTGGCACTAG MGSGAGSFFKVILKNFDVLAGPLVSLVYPLYASVRAIETKSPVDDQQWLTYWILYSMLTLFELTFAKVLEWLSLKSICEFFFLLQLMIPIWPYAKLILSCWLVIPYFSGAAYVYEHFVRPLFVNKQTVNIWYVPKMKDFFSKPDDILTAAEKYIAENGTADLQNIINRADKARTSSRYMSYSEDHDHDHNYNHDYWH Homology
BLAST of ClCG06G016280 vs. NCBI nr
Match: KAA0057935.1 (HVA22-like protein a [Cucumis melo var. makuwa] >TYJ98622.1 HVA22-like protein a [Cucumis melo var. makuwa]) HSP 1 Score: 350.9 bits (899), Expect = 7.1e-93 Identity = 175/197 (88.83%), Postives = 180/197 (91.37%), Query Frame = 0
BLAST of ClCG06G016280 vs. NCBI nr
Match: XP_008453193.1 (PREDICTED: HVA22-like protein a [Cucumis melo] >XP_008453194.1 PREDICTED: HVA22-like protein a [Cucumis melo]) HSP 1 Score: 343.6 bits (880), Expect = 1.1e-90 Identity = 174/197 (88.32%), Postives = 178/197 (90.36%), Query Frame = 0
BLAST of ClCG06G016280 vs. NCBI nr
Match: XP_004138159.1 (HVA22-like protein a [Cucumis sativus] >KGN63661.1 hypothetical protein Csa_014222 [Cucumis sativus]) HSP 1 Score: 343.2 bits (879), Expect = 1.5e-90 Identity = 174/201 (86.57%), Postives = 179/201 (89.05%), Query Frame = 0
BLAST of ClCG06G016280 vs. NCBI nr
Match: XP_038879287.1 (HVA22-like protein a [Benincasa hispida]) HSP 1 Score: 338.6 bits (867), Expect = 3.7e-89 Identity = 172/196 (87.76%), Postives = 176/196 (89.80%), Query Frame = 0
BLAST of ClCG06G016280 vs. NCBI nr
Match: KAG6589501.1 (HVA22-like protein a, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 336.7 bits (862), Expect = 1.4e-88 Identity = 169/197 (85.79%), Postives = 176/197 (89.34%), Query Frame = 0
BLAST of ClCG06G016280 vs. ExPASy Swiss-Prot
Match: Q9S7V4 (HVA22-like protein a OS=Arabidopsis thaliana OX=3702 GN=HVA22A PE=2 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 5.5e-64 Identity = 123/193 (63.73%), Postives = 149/193 (77.20%), Query Frame = 0
BLAST of ClCG06G016280 vs. ExPASy Swiss-Prot
Match: Q9S784 (HVA22-like protein c OS=Arabidopsis thaliana OX=3702 GN=HVA22C PE=2 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 2.0e-42 Identity = 97/196 (49.49%), Postives = 131/196 (66.84%), Query Frame = 0
BLAST of ClCG06G016280 vs. ExPASy Swiss-Prot
Match: Q9SYX7 (HVA22-like protein b OS=Arabidopsis thaliana OX=3702 GN=HVA22B PE=2 SV=2) HSP 1 Score: 172.9 bits (437), Expect = 3.5e-42 Identity = 94/187 (50.27%), Postives = 124/187 (66.31%), Query Frame = 0
BLAST of ClCG06G016280 vs. ExPASy Swiss-Prot
Match: Q682H0 (HVA22-like protein f OS=Arabidopsis thaliana OX=3702 GN=HVA22F PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.6e-26 Identity = 60/112 (53.57%), Postives = 74/112 (66.07%), Query Frame = 0
BLAST of ClCG06G016280 vs. ExPASy Swiss-Prot
Match: Q9FED2 (HVA22-like protein e OS=Arabidopsis thaliana OX=3702 GN=HVA22E PE=2 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.0e-21 Identity = 56/104 (53.85%), Postives = 65/104 (62.50%), Query Frame = 0
BLAST of ClCG06G016280 vs. ExPASy TrEMBL
Match: A0A5A7UWG1 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002450 PE=3 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 3.5e-93 Identity = 175/197 (88.83%), Postives = 180/197 (91.37%), Query Frame = 0
BLAST of ClCG06G016280 vs. ExPASy TrEMBL
Match: A0A1S3BWS9 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103493983 PE=3 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 5.5e-91 Identity = 174/197 (88.32%), Postives = 178/197 (90.36%), Query Frame = 0
BLAST of ClCG06G016280 vs. ExPASy TrEMBL
Match: A0A0A0LUH0 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G009650 PE=3 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 7.2e-91 Identity = 174/201 (86.57%), Postives = 179/201 (89.05%), Query Frame = 0
BLAST of ClCG06G016280 vs. ExPASy TrEMBL
Match: A0A6J1E1G0 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111429946 PE=3 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 3.3e-88 Identity = 168/197 (85.28%), Postives = 176/197 (89.34%), Query Frame = 0
BLAST of ClCG06G016280 vs. ExPASy TrEMBL
Match: A0A6J1JI83 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111484825 PE=3 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 1.8e-86 Identity = 168/197 (85.28%), Postives = 173/197 (87.82%), Query Frame = 0
BLAST of ClCG06G016280 vs. TAIR 10
Match: AT1G74520.1 (HVA22 homologue A ) HSP 1 Score: 245.4 bits (625), Expect = 3.9e-65 Identity = 123/193 (63.73%), Postives = 149/193 (77.20%), Query Frame = 0
BLAST of ClCG06G016280 vs. TAIR 10
Match: AT1G69700.1 (HVA22 homologue C ) HSP 1 Score: 173.7 bits (439), Expect = 1.5e-43 Identity = 97/196 (49.49%), Postives = 131/196 (66.84%), Query Frame = 0
BLAST of ClCG06G016280 vs. TAIR 10
Match: AT5G62490.1 (HVA22 homologue B ) HSP 1 Score: 172.9 bits (437), Expect = 2.5e-43 Identity = 94/187 (50.27%), Postives = 124/187 (66.31%), Query Frame = 0
BLAST of ClCG06G016280 vs. TAIR 10
Match: AT2G42820.1 (HVA22-like protein F ) HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27 Identity = 60/112 (53.57%), Postives = 74/112 (66.07%), Query Frame = 0
BLAST of ClCG06G016280 vs. TAIR 10
Match: AT5G50720.1 (HVA22 homologue E ) HSP 1 Score: 104.0 bits (258), Expect = 1.4e-22 Identity = 56/104 (53.85%), Postives = 65/104 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|