ClCG02G004800 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCCAAAAGCAGAATCCTCATCGTCGGAGGCACCGGCTACATCGGTAAATTCATCGTCGAGGCTGGTCATCAGACATATGCTCTCGTTCGAGATTCCGCTCTCTCCGATCGAGCCACGTCTCTGATCGTACACAGCTTCAAAAGCGTTGGACTCATTCTTGTCTATGTAACTATACAAACCTTAATTTTCATCATTTTTCTCTCTCCTTTTTCTACTTTCATTATGGGTTTTGAGAAGGATATAAAAAGAATTTAGTGCAAAACCTTTCTCGTTGTTTTGAGTCTAGTTTCTATTTGGTCTCTATATTTCAAAATTTTACAATTTTACATTTTATTTCAATTTGATCCTTAAGTTTCAAGATTAACATTTTAAGCTCGATTTTTTACTAAATAATCACTTTCTTACATTAATTTAAAAGGATTAAAGGAAATTATAATTATTAAGTTTTACTATTTTTCATCATTATTAAAATTAAATTAATAGACATTAAAGCCAAAGGCTGAAATTAGTATAATATTGAAAATTTGAGGTTAAAAAATGTTAATCTTGAAATTTAGGGACCAAATTAAATTAAAAAAAAAAAAAACTCAAAATTTAAATATTAAAAGTGTTATATTTTGAAACTTATGGACTAAATTAAAATTAAATTTAAAATTTAAGGACTAAAAGTGTAATATTTTGAAATTTAGGGACCAAATAGAAAACTAAGCCCAAAATCTAAGGATTAAAAAGGTATTTTTTTATAAAGATTTGTGTGAACTTTTTTAAAAACTACATATTATTCTCATTGTTGGATGAAAATATTTCATCAACAACTCTTAGATTTAGGAAAATTATCTTAAATGGCAAAATTAGTAGCAAAATACACAGTGATAGACCGCGATAGATCGTGATAGACTACTATTGCAATCTATCGCGGTCTACTTAGATAGATAGTAAAATTTTGTTATATTTGTAAATATTTTAGTTACTTTTAATATATTTGAAAAGAGCCAGTGGATTTATTATCTTTCTTGGAGTTGAGTTTTTTTTTTTAAATATTCCTGGAGATGAAACTAATTTGATCTATGAAACTTTTTTCACTAGGAAATGCTTTTTTTTATTAATGTGGAAATTAATTTTAATGGCTTTTATTCATTATTTATATTACTAATTAAACGTCTAGTATAAATATGTTAATTTATTAAAATAGCTTTTAGGGCTATCTTCAAGGAGGAACCAAAATGTTTACAAATATAGCAAAATTTCACCGTCTAACTGCGATAGACTACTATTTGTGTCATACTAGACACAGATAATAGTCTATCACTATCTATCACAACCTATCACGGTCTATCATAGATAGATTGTGATATTTTGCTATTAATTGTACATATTTTCAGTAATTTTGCCACTTAAAGTAATTTCTCTCATTTTTAATCAAATCTGACCATTAAAATTTTTCACAAGAAAAATTTACATAATAACTTAATATATATTATTTTATGAGCAAAGAGAGTTAAAAAGTGGAGATGAGATATGGGATGGCTTGTATATGTTTACTTTTAATAAAAGAGTGCGATTTGCATGTTGATTTGAACTTGCTTAGTAGGTTTGAATAAGATGAAATATAAGCTTTGAAAATTTAAATTACCAAGTTAAATACAAAATTTAGTATCAAAACAAGATTTAAATCTCTAAAAAATATAATTTTTCTCAAAAAAAAAAAAAAAAATCTAAAATATAATATTGAATATTATTTTTTTTGTTAAGTTTAAATATAAAAACAAAGTAGTTGAAATTGACATGGTTCTCTCTTGATTTTCTTATATTGTGTGTCTATTAATGTCTTCATAAGATAAAGTGAAGTTTGTGTTTGTTTCCATTTTGTAGCAATTTTCAATAAGGAAGAAGATATTGCCTCCTACACTATTAGAGGTGTGGATGATCCAAGAACTTTGAACAAAGCCCTCTACATTAAGCCTCCTCAAAATGTCCTCTCAATCAATGAACTTGTGGCCCTATGGGAAAACAAAATTGGGAAAACCCTTGAAAAAACCTACATTTCAGAGGATCAGTTACTGAAGAATATCCAAGGTCAGAATTCAAAATTATAAGAGTCTTTCGTGAATAGTTTCGGTCTCATTTCGTAACCATTTCGTCTTTTAAAATTAAGCCTCTTTTCTCTCAATTGTTTATAATGATTTGCATCTTTCTTAAGTACAAGTGTTGAAATTGTTAGCCAAATTTCCAAAAAATAATAATAATAATAATAATAATAATAATAATAATAATTTTAAAAAACTACTTTTTTTTTTTAGTTTTCAAAATTTGGCTTGGTTTTTGAAAATATTGGTAAAAAGTAGATGACAAATCAAAAAATCTAGAGGTGGAAGAAGTGTTTTACTGGCTTTTTTTTAAACAACATAAAACAAAAAACCAACGAGGCCTTTGTTTTTTGTTTTTTATCTCTCAGTTTAGTACTATTATCTTTTCATATTTTTTAAACGAAAATTTTGAACTCTTAGTCGGTTGAGGTCTCCACATTCAAAAGATTGGGAGAATTGACAATCTAATTATTCAAAAATAATGGATTACTCCTCTCATTACCAATTAATTTTGATTTCAATACTATTCCTACTCCCATTGTCGTTTGTTAAAATTTTATTTTCTCTAAATTTCAGTACTTTTGTTTTCACATTTTTTAAAAAATATATCTTGAACTATTAGTCTATTGAGGACTTTGCGTTAAAAAGATGAGGAGAATTCACAATGTTTATAAGATAACGAGTTACTTCTCCCATTACCAATTTATTTTAAGATAAAAACTCATGTTTATCTAATATAGTCAAATTCAAAAAAATGAAAACATGTTTTTGATAACTATGACCCCATTTGGTAACTATTTTGTTTTTAGTTTTTAGTTTTTGAAAATTAAGCATATTTTCTCACATTTACTTATAATGGTTTGCATCTTTCTTGAGTACAAGAGTTTAATTCTTAGCCAAATTCCAATAACAAAAACTACTTTTTATTAGTTTTCAAATTTTGGTTTGATTTCTAAAAACATGGGGTAAACGTAGATAAGAAAACAAAACATTTAGGAGTGAGAGGAGTGTTTGTAGGCTCAAATTTCAAAAACTAAAAACCAAAAACCCAAATGATTACTAAATGAGATCTAAATTTTTTTAAGTACATAATAAAACAATGAGACTTATAGGTTTGTAAGTTGGTACTAAAAAAACCTTAAGATTATCCAACATTATTCTTATCGAGTACAAAAAATAAAAAATGATAAATTCAAAAGAGACACCATCTAGAGATGTAATGTTCAAAAGATGGAGCTCACAATCTTTAGAAAAATATATATGAGCTAATGCTCCCATTGTTAATTGGTTGTGGGATGAAATCTCATGTTTAATAATCTAATATGTCATCAAACCCGTGAACCCCAAAGATGGTATTCGATCCAAAAAAACAAAAAGTTAAAGATCTGACTCAAGATTAGTGAACTCAAGAGGCGCCATCTTGAGAGGTATATATTGGATCCCACGTACACATTGAATTCAATTTCATCTCATAATTAATTAACAATGGAAAAAGTAATTCATGTATGTTATAAATATCGTGAGGTATGGCCGGAAAAAGTGTTTAGGTATATTTTAAACTTTTATTAGGGTTCTTAAGAAAATAATAAATAAAAAAAATGACCCAAAATACTATGAATTAAGGGCTCTTAGCTTTATTTTTAGTTTCCTTGGATGAATATTGAATAGAAGTTGAAAGCTTTAAGGTTTATTATTGTGCAGAAGCAGTACCTCCATTGAATTTGCTACTGTCTTTAGATTACTCCATTTTTGTGAAGGGAGATCACACCAACCAAGAAATTGAAGCATCAGTTGGATTGGAAGCTTCAAAGTTATATCCAGATGTTAAATATACTTCTGTTAGTGAATATCTCAATCAATTTGTTTAGCTATTTTTCATCTCCATCTTCTCTGTAAAACTATATTAATAAAAAGACTAAACTTCAACATTCTAATATCGTAATTTAGTCTATGTACTTTGAGTCTCGTTCCATTTCAAGTTTCTGTATTTTCGAATTACTCTACATTTAGTCTTGTTGTATACTTCGAATAAAATTTTGAATTGTCGTTCCCGTTCATTGTCAACTTTTCAAAAGAAATTTTTTAATTTATATTAGCATCTCTGTGAATTTTGAAAATATGTTCACATCATGTATTTCTTTTCATAAAAATTATTATTATTAATTAAGTATGTTTATTTTAGGGTTTAGGATAACAAATTAATGACATAACTACGAGTGTGATTACTAATACATAGGAATACGAGTACAATTTCAAGTTGAATAATTAGAGACAACCTTGCACAAAGTTCATCCTCGCTAGACCATAATGTCTTGATATAAATGATGTGAATAGACTCCTATCTAAAGCTTTGTGTGTATGGAAGATGGACGGAATTGTCAATCTCTCCTTCAATGCTTTATGCATTTTCTTGTAAGTTAAGAAATCTTTAACTTGCATCTTCCAATGCCCAAAATTTGTCTTATCAAATTTTATGATTCCCTCAAAAAAAAAGGAAAAAAAAAAAAAAAAAAGACTCTGATGACTCCCATGAACTCCCTGATACCACTTGTTGGAAATTTATGTGAGATATAAATAAATGCGGAACAAATTAGATTAAATCTAAAACTCCCACTTTACAGGTTAGAGCTAAATAAGTAATCGATCAAAAATAACAAATATTAAAATGAAGGAAAAAAGAGAACGACATCGAAAAATATACTAGTTCGCCCCAAACTCGGTAATACATCCAGTCTTTTACAATAAAGGTAGATTCTACCATGATGGAGAGTGCAAAGAGACCCAAACTTCTACAAATTTGTCTCAAATAGCCCAATTACTTGAACTATTCAATTTCTAATACCCCAACTCAATAATTTGAATTAGACAATAAGAGAAATCCTCAATCCAATAAAAAAAAACAAACACTATTCTCTCCAGAATACCCTCCCTCCTCACTGGCACACTAATTAAAGTGACCCACTGGAATTTTAAAGAACTGCAAACTGAAGAAAGATTCTTGATTCATATTGTGGTTTGGTATGTTTAAAACTTCATGCAACACACGTATACTTCACTAGTAATGGGCCAACCCCAGTATCCTTGAAGAAATAAAAATCAGTCGCTGATGCAAGTGTCTGCTTCTCTTCTTTAATTTGATTTCTATTGAAGATTGATCCATGGCCATCCATTTCTTCTTTTAATAAATCCATGGCCATCCATTCTTCCCGATGGTCCCCTGCTGGTGCTGGGTGTTGGAAGTTGAACGTAGATGCTACTTGGTCCAATGAAAAGGGGAGAGGGGCTTAG ATGGCTGCCAAAAGCAGAATCCTCATCGTCGGAGGCACCGGCTACATCGGTAAATTCATCGTCGAGGCTGGTCATCAGACATATGCTCTCGTTCGAGATTCCGCTCTCTCCGATCGAGCCACGTCTCTGATCGTACACAGCTTCAAAAGCGTTGGACTCATTCTTGTCTATGAAGAAGATATTGCCTCCTACACTATTAGAGGTGTGGATGATCCAAGAACTTTGAACAAAGCCCTCTACATTAAGCCTCCTCAAAATGTCCTCTCAATCAATGAACTTGTGGCCCTATGGGAAAACAAAATTGGGAAAACCCTTGAAAAAACCTACATTTCAGAGGATCAGTTACTGAAGAATATCCAAGAAGCAGTACCTCCATTGAATTTGCTACTGTCTTTAGATTACTCCATTTTTGTGAAGGGAGATCACACCAACCAAGAAATTGAAGCATCAGTTGGATTGGAAGCTTCAAAGTTATATCCAGATGTTAAATATACTTCTATTGATCCATGGCCATCCATTTCTTCTTTTAATAAATCCATGGCCATCCATTCTTCCCGATGGTCCCCTGCTGGTGCTGGGTGTTGGAAGTTGAACGTAGATGCTACTTGGTCCAATGAAAAGGGGAGAGGGGCTTAG ATGGCTGCCAAAAGCAGAATCCTCATCGTCGGAGGCACCGGCTACATCGGTAAATTCATCGTCGAGGCTGGTCATCAGACATATGCTCTCGTTCGAGATTCCGCTCTCTCCGATCGAGCCACGTCTCTGATCGTACACAGCTTCAAAAGCGTTGGACTCATTCTTGTCTATGAAGAAGATATTGCCTCCTACACTATTAGAGGTGTGGATGATCCAAGAACTTTGAACAAAGCCCTCTACATTAAGCCTCCTCAAAATGTCCTCTCAATCAATGAACTTGTGGCCCTATGGGAAAACAAAATTGGGAAAACCCTTGAAAAAACCTACATTTCAGAGGATCAGTTACTGAAGAATATCCAAGAAGCAGTACCTCCATTGAATTTGCTACTGTCTTTAGATTACTCCATTTTTGTGAAGGGAGATCACACCAACCAAGAAATTGAAGCATCAGTTGGATTGGAAGCTTCAAAGTTATATCCAGATGTTAAATATACTTCTATTGATCCATGGCCATCCATTTCTTCTTTTAATAAATCCATGGCCATCCATTCTTCCCGATGGTCCCCTGCTGGTGCTGGGTGTTGGAAGTTGAACGTAGATGCTACTTGGTCCAATGAAAAGGGGAGAGGGGCTTAG MAAKSRILIVGGTGYIGKFIVEAGHQTYALVRDSALSDRATSLIVHSFKSVGLILVYEEDIASYTIRGVDDPRTLNKALYIKPPQNVLSINELVALWENKIGKTLEKTYISEDQLLKNIQEAVPPLNLLLSLDYSIFVKGDHTNQEIEASVGLEASKLYPDVKYTSIDPWPSISSFNKSMAIHSSRWSPAGAGCWKLNVDATWSNEKGRGA Homology
BLAST of ClCG02G004800 vs. NCBI nr
Match: TQD81953.1 (hypothetical protein C1H46_032500 [Malus baccata]) HSP 1 Score: 221.1 bits (562), Expect = 9.1e-54 Identity = 108/191 (56.54%), Postives = 142/191 (74.35%), Query Frame = 0
BLAST of ClCG02G004800 vs. NCBI nr
Match: TQD81957.1 (hypothetical protein C1H46_032504 [Malus baccata]) HSP 1 Score: 215.3 bits (547), Expect = 5.0e-52 Identity = 108/206 (52.43%), Postives = 142/206 (68.93%), Query Frame = 0
BLAST of ClCG02G004800 vs. NCBI nr
Match: XP_038887686.1 (phenylcoumaran benzylic ether reductase Pyrc5-like [Benincasa hispida]) HSP 1 Score: 213.0 bits (541), Expect = 2.5e-51 Identity = 136/304 (44.74%), Postives = 153/304 (50.33%), Query Frame = 0
BLAST of ClCG02G004800 vs. NCBI nr
Match: XP_004148526.1 (phenylcoumaran benzylic ether reductase Pyrc5 [Cucumis sativus] >KAE8645643.1 hypothetical protein Csa_020447 [Cucumis sativus]) HSP 1 Score: 205.7 bits (522), Expect = 4.0e-49 Identity = 134/304 (44.08%), Postives = 150/304 (49.34%), Query Frame = 0
BLAST of ClCG02G004800 vs. NCBI nr
Match: XP_008448081.1 (PREDICTED: isoflavone reductase-like protein [Cucumis melo]) HSP 1 Score: 203.8 bits (517), Expect = 1.5e-48 Identity = 131/304 (43.09%), Postives = 148/304 (48.68%), Query Frame = 0
BLAST of ClCG02G004800 vs. ExPASy Swiss-Prot
Match: O81355 (Phenylcoumaran benzylic ether reductase Pyrc5 OS=Pyrus communis OX=23211 GN=PYRC5 PE=1 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.4e-44 Identity = 111/303 (36.63%), Postives = 143/303 (47.19%), Query Frame = 0
BLAST of ClCG02G004800 vs. ExPASy Swiss-Prot
Match: Q9FUW6 (Phenylcoumaran benzylic ether reductase Betv6 OS=Betula pendula OX=3505 GN=BETV6 PE=1 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 2.0e-43 Identity = 109/303 (35.97%), Postives = 144/303 (47.52%), Query Frame = 0
BLAST of ClCG02G004800 vs. ExPASy Swiss-Prot
Match: B9HRL7 (Phenylcoumaran benzylic ether reductase POP1 OS=Populus trichocarpa OX=3694 GN=PCBER PE=1 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 2.6e-43 Identity = 108/299 (36.12%), Postives = 142/299 (47.49%), Query Frame = 0
BLAST of ClCG02G004800 vs. ExPASy Swiss-Prot
Match: B2WSN0 (Eugenol synthase 2 OS=Clarkia breweri OX=36903 GN=EGS2 PE=1 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 3.7e-42 Identity = 106/304 (34.87%), Postives = 141/304 (46.38%), Query Frame = 0
BLAST of ClCG02G004800 vs. ExPASy Swiss-Prot
Match: P52578 (Isoflavone reductase homolog OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 7.1e-41 Identity = 106/301 (35.22%), Postives = 136/301 (45.18%), Query Frame = 0
BLAST of ClCG02G004800 vs. ExPASy TrEMBL
Match: A0A540L646 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_032500 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 4.4e-54 Identity = 108/191 (56.54%), Postives = 142/191 (74.35%), Query Frame = 0
BLAST of ClCG02G004800 vs. ExPASy TrEMBL
Match: A0A540L652 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_032504 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 2.4e-52 Identity = 108/206 (52.43%), Postives = 142/206 (68.93%), Query Frame = 0
BLAST of ClCG02G004800 vs. ExPASy TrEMBL
Match: A0A1S3BJT1 (isoflavone reductase-like protein OS=Cucumis melo OX=3656 GN=LOC103490365 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 7.3e-49 Identity = 131/304 (43.09%), Postives = 148/304 (48.68%), Query Frame = 0
BLAST of ClCG02G004800 vs. ExPASy TrEMBL
Match: A0A6J1IIK0 (isoflavone reductase-like protein OS=Cucurbita maxima OX=3661 GN=LOC111474287 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 9.6e-49 Identity = 128/303 (42.24%), Postives = 149/303 (49.17%), Query Frame = 0
BLAST of ClCG02G004800 vs. ExPASy TrEMBL
Match: A0A6J1C1B8 (isoflavone reductase-like protein OS=Momordica charantia OX=3673 GN=LOC111007550 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 1.5e-46 Identity = 125/304 (41.12%), Postives = 147/304 (48.36%), Query Frame = 0
BLAST of ClCG02G004800 vs. TAIR 10
Match: AT1G75290.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 165.2 bits (417), Expect = 5.5e-41 Identity = 77/131 (58.78%), Postives = 102/131 (77.86%), Query Frame = 0
BLAST of ClCG02G004800 vs. TAIR 10
Match: AT4G39230.1 (NmrA-like negative transcriptional regulator family protein ) HSP 1 Score: 165.2 bits (417), Expect = 5.5e-41 Identity = 82/146 (56.16%), Postives = 104/146 (71.23%), Query Frame = 0
HSP 2 Score: 59.3 bits (142), Expect = 4.3e-09 Identity = 29/57 (50.88%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of ClCG02G004800 vs. TAIR 10
Match: AT1G75280.1 (NmrA-like negative transcriptional regulator family protein ) HSP 1 Score: 163.7 bits (413), Expect = 1.6e-40 Identity = 106/304 (34.87%), Postives = 140/304 (46.05%), Query Frame = 0
BLAST of ClCG02G004800 vs. TAIR 10
Match: AT1G19540.1 (NmrA-like negative transcriptional regulator family protein ) HSP 1 Score: 150.2 bits (378), Expect = 1.8e-36 Identity = 68/111 (61.26%), Postives = 90/111 (81.08%), Query Frame = 0
HSP 2 Score: 55.5 bits (132), Expect = 6.2e-08 Identity = 26/57 (45.61%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of ClCG02G004800 vs. TAIR 10
Match: AT1G75300.1 (NmrA-like negative transcriptional regulator family protein ) HSP 1 Score: 143.7 bits (361), Expect = 1.7e-34 Identity = 70/120 (58.33%), Postives = 94/120 (78.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|