ClCG03G001060 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGAACAATAGTTCCACAGTGGATTCATCTTATACAAGTAAATAACAACAACACTGATATGAGGGAACTTCTTGGATGAAGAAAAAAAAAAAGATCAAATTCCATGTAAATTTAAGCCTAGAGTGAAGTATCAGGGGGTTTGTTATTTTTATTTATCTATTTATTATTATTATTATTATTATTATTATTTGAGAAGAGCTATTTCTTTTCTTTGATAGCAAAATTGCAGTTTCTTATCCACTATTTGGTCCCTTTCTTTAGATCAGTCTTGAGTTGCTTACGACTGCACACTAAACTAGAACTAACTTCTCCCAAAGACTCTAAAATGTTCCTCGTACTACATGATGTATAAAAGATTTTCCACCACTTGTTCAAATAGGCCTCATCATTGACGTACTTCTACAAGTTGGCACCTTGATCTTTCTCTACGTAAAAATTGATTTTTTGGAACGTTTATCTTATTTTAATGCTTTTTTCATATGAATAAATAAGATTTTTTTTTTTTTTTAATTTTAAAATTTTTTCTTTTCATATATAGCAAAATGAACTAACGATAAATTGAACAAATATGGTCGCCCTCTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCACTAAGAATTATGGTAGAGCAGTTTATGAATGTCTACGCGGTGGACTTGATTTTACCAAAGATGATGAAAACGTGAATTCCCAACCATTTATGCGTTGGAGAGACCGTTTCCTATTTTGTGTGGAAGCTATTTATAAATCACAGGCTGAAACAGGTGAAATCAAGGGACATTACTTGAATGCTACTGCAGGTACATGCGAAGAAATGATGAAAAGGGCTGTATTTGCCCGAGAATTGGGAGTTCCTATCGTAATGCATGACTACTTAACAGGTGGATTCACTGCAAATACTAGCTTGGCTCATTATTGCCGAGATAATGGTCTATTATTTACAAATATAGCAAAATGAAAAAAATAGTCTATCACTGCCTAATAGACACTAATCGATTGATAGTGATTGATGATAGTAGTCTCTTACTCTCTATTAGTAATAGTAGTCTATACTTGTTTATCAGTTTGAAAAAGTTTTTTTTTATTTTTTATTTGAAAATATTTTAAACAATTTTGCAATCTAAAACAATTACCTCTAAAAATATTGAATAATTATTAATACTACTTTAATATTTTTTATATGATTATTTAATTTCAATTTATATTTACAAAATGGGCAAAACAAACACAAACACTTAACTCCTAGACATTAATTATCTTTACCAAAACGAACTTAGCTTCGCAGTAATTGACATGATTTTCCATCCAAGAGGTGAGAGGTTCAATCCCCATTCCCCCAATTGTTGTACTAAAAAAAGACATTATCTTGATATCCAAATACAGATATGATCCAACAAGATTCGTAAGCCCTTGACCCAACTATGATAGCTTTATTATAGTTTTTTTTAGTACATTATGTGA ATGCGAACAATAGTTCCACAGTGGATTCATCTTATACAATATGGTCGCCCTCTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCACTAAGAATTATGGTAGAGCAGTTTATGAATGTCTACGCGGTGGACTTGATTTTACCAAAGATGATGAAAACGTGAATTCCCAACCATTTATGCGTTGGAGAGACCGTTTCCTATTTTGTGTGGAAGCTATTTATAAATCACAGGCTGAAACAGGTGAAATCAAGGGACATTACTTGAATGCTACTGCAGGTACATGCGAAGAAATGATGAAAAGGGCTGTATTTGCCCGAGAATTGGGAGTTCCTATCTACATTATGTGA ATGCGAACAATAGTTCCACAGTGGATTCATCTTATACAATATGGTCGCCCTCTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCACTAAGAATTATGGTAGAGCAGTTTATGAATGTCTACGCGGTGGACTTGATTTTACCAAAGATGATGAAAACGTGAATTCCCAACCATTTATGCGTTGGAGAGACCGTTTCCTATTTTGTGTGGAAGCTATTTATAAATCACAGGCTGAAACAGGTGAAATCAAGGGACATTACTTGAATGCTACTGCAGGTACATGCGAAGAAATGATGAAAAGGGCTGTATTTGCCCGAGAATTGGGAGTTCCTATCTACATTATGTGA MRTIVPQWIHLIQYGRPLLGCTIKPKLGLSTKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCVEAIYKSQAETGEIKGHYLNATAGTCEEMMKRAVFARELGVPIYIM Homology
BLAST of ClCG03G001060 vs. NCBI nr
Match: AAP88014.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Ecballium elaterium]) HSP 1 Score: 214.5 bits (545), Expect = 4.7e-52 Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of ClCG03G001060 vs. NCBI nr
Match: AHI48854.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Bruguiera cylindrica] >AHI48856.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Bruguiera parviflora] >AIH06986.1 ulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Bruguiera cylindrica] >AIH06988.1 ulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Bruguiera parviflora]) HSP 1 Score: 213.8 bits (543), Expect = 8.0e-52 Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of ClCG03G001060 vs. NCBI nr
Match: XP_042528805.1 (ribulose bisphosphate carboxylase large chain-like [Dipodomys spectabilis]) HSP 1 Score: 213.8 bits (543), Expect = 8.0e-52 Identity = 97/105 (92.38%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of ClCG03G001060 vs. NCBI nr
Match: YP_009476306.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Fraxinus excelsior] >YP_009575772.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Fraxinus mandshurica] >QCQ20610.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Phaseolus vulgaris] >QFK68960.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Phoebe zhennan] >AVM38796.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Fraxinus excelsior] >QBJ06763.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Fraxinus mandshurica]) HSP 1 Score: 213.4 bits (542), Expect = 1.0e-51 Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of ClCG03G001060 vs. NCBI nr
Match: CAJ86723.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Athanasia trifurcata]) HSP 1 Score: 213.4 bits (542), Expect = 1.0e-51 Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of ClCG03G001060 vs. ExPASy Swiss-Prot
Match: Q09X09 (Ribulose bisphosphate carboxylase large chain OS=Morus indica OX=248361 GN=rbcL PE=3 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 1.4e-54 Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of ClCG03G001060 vs. ExPASy Swiss-Prot
Match: Q32625 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Morus rubra OX=32202 GN=rbcL PE=3 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 1.4e-54 Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of ClCG03G001060 vs. ExPASy Swiss-Prot
Match: P36485 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Salvia divinorum OX=28513 GN=rbcL PE=3 SV=2) HSP 1 Score: 213.4 bits (542), Expect = 1.4e-54 Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of ClCG03G001060 vs. ExPASy Swiss-Prot
Match: P28455 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Sedum rubrotinctum OX=3785 GN=rbcL PE=3 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 1.4e-54 Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of ClCG03G001060 vs. ExPASy Swiss-Prot
Match: P48686 (Ribulose bisphosphate carboxylase large chain OS=Brassica oleracea OX=3712 GN=rbcL PE=3 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 1.8e-54 Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of ClCG03G001060 vs. ExPASy TrEMBL
Match: Q7YKF7 (Ribulose bisphosphate carboxylase large chain OS=Ecballium elaterium OX=3679 GN=rbcL PE=3 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 2.3e-52 Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of ClCG03G001060 vs. ExPASy TrEMBL
Match: A0A0B4L8W1 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Bruguiera parviflora OX=106618 GN=rbcl PE=3 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 3.9e-52 Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of ClCG03G001060 vs. ExPASy TrEMBL
Match: A0A0B4L8F2 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Bruguiera cylindrica OX=106616 GN=rbcl PE=3 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 3.9e-52 Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of ClCG03G001060 vs. ExPASy TrEMBL
Match: Q8SLM7 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Cornus suecica OX=164435 GN=rbcL PE=3 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 5.1e-52 Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of ClCG03G001060 vs. ExPASy TrEMBL
Match: C4MXK3 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Chuquiraga morenonis OX=516720 GN=rbcL PE=3 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 5.1e-52 Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of ClCG03G001060 vs. TAIR 10
Match: ATCG00490.1 (ribulose-bisphosphate carboxylases ) HSP 1 Score: 211.8 bits (538), Expect = 2.8e-55 Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of ClCG03G001060 vs. TAIR 10
Match: ATMG00280.1 (Ribulose bisphosphate carboxylase large chain, catalytic domain ) HSP 1 Score: 167.5 bits (423), Expect = 6.1e-42 Identity = 76/82 (92.68%), Postives = 79/82 (96.34%), Query Frame = 0
BLAST of ClCG03G001060 vs. TAIR 10
Match: AT2G07732.1 (Ribulose bisphosphate carboxylase large chain, catalytic domain ) HSP 1 Score: 165.6 bits (418), Expect = 2.3e-41 Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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