Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTGGTTTCTCATTTGGACTGGTATGCCTCTGATCATAGGCCAATTTGTTTATCCATTGATGGATAATGTTCGTGGTCCTCCTCGATTTCACTTTGAGGAATTTTGGGCAGATGACAAGGAGTGTCAGGAAATTGTTAAGCAGATGTGGGGGTTAGAGGCTAATGCAATTAATGGTTTAGACGTCTCGCTTGAGCAACGTAAAGAAAGGTTTTGGGGGTGGGGTAGGAGGAAAAAGGTTGAGAAATGGAGGACTATTAACAGATTGAGGTTGCTTATTAAAGAAGAGTTTGCCAGAAGGTGGGATACGAATTTTGAGCATATTCATTTACTGGAAAACGATCTTGAGAAGGAAGTGGTGGCTGAAGAGAAGTACTGGAGGCAAAGGTCTCGGGTTGATTGGCTGAAATGGGGGGATAGAAACACTCGTTGGTTTCATTTGAAAGCTTCTCGTCGTAAAGCTAAAAATTTTGTGAACGAGATCAGAGATGATTCAGGTAGACTTATTCGATCGAATAAGGAGATTTTGAATGTCATTAGCAACTATTTTGTGAATTTATTCAAGTCTTCGGATCCTTCTGAAGTGCATATTGAGCAGGCTTTAGCTTCGATTCCTTGTAGAGTGATAGAAAGTATGGATGATGCTTTGTGTGCTCCTTTCGTTGAGGAAGAGGTTCGATTGACATTATTTCAAATGTTTCCCACTAAGGCCCCTGGTCAGGATGGCTTTCCAGCTATGTTTTATCAAAAATTTTGGGATATCCTCAAAGGGAAAACAGTAGCTTTTTGCCTTGATGTGCTTAATAATGGCAAATTTATTAAGGAGGTTAACAAGACGGATATTGTGCTTATTCCTAAGGTATCTAACCTCATTGAGGTGAGTGATTTTAGCCCTATCAGTTTGTGTAATGTTTCTTATAAAATTGTTTAAAAAATGATTGTGAATAGAATGAAAGGTATGCTCTCTGAGGTAATTTCGGATAACCAACATGCTTTTGTGCCTGGTCGGTGCATCTCGGATTGCTTATTGATTGGGTATGAATGTTGCACCATATTCATAACAAGAGAAATAAGGGTGGTAGGATGATGGCCCTAAAGTTGGATATGAGTAAAGCCTACGATAGAGTTGAATGGAAATTCCTCAGAAATGTAATGTTGCGGCTTGGTTTTAGGGAGCATTGGGTTAATCTGATTATGGATTGTGTTCCTCGGTTAGCTTCTCTATTCTATTGAACGGTTAGCAGGGTTTGCCCTTCAGACCCGAACGTGGATTAAGCAAGGTGATCCTCTCTCTCCTTACCTGTTTCTTTTATGCTCAGAAAGTCTCTCTTGTTTAGTGGATGATGCTCAGAGGAGAGGCCAATTAAAGGGCGTAAGATTGCTCGAAGGAGTCCATCAATATCGCACCTTTTTTTTGCCGACGATAGCTTACTATTCTGTCATGCTTCCTTTATGGAAGTTTCAACTATTAAGGAAATCCTAAAAGTTTATGAAGGGGGTTCAAGCCAGTGTGTGAATTTTTCAAAATCTGCTGTCGTATTTAGTCCTAATGTTCCTTCATCTTCGAAGCATTACCTTGCGAGTTTCCTTGGGATAAAGGTGGTTACTGAGCTGGGGAGATACTTGGGTCTTCCTTCGCGTTTTTTGGCTAACAAGATGAAAGAGTTGAATTTTTTAAAAGAAAGAGTTCAAAAAGCTGTGGGTGGCTGGAAAGGGAATTTTTTCTCAACTGCTGGGAAGGAAGTTTTGTTAAAATCTGTTGTTCAAGCTATTCCCACTTATATTATGGCCTGTGTTCAACTCCCTAAGGGTCTTTGTTCTCATCTTTCCCAATTTATGGCTCGTTTTTGGTGGGGATCCTCCGAGACTAAGTCTAAAATCCACTAGGCTAGTTGGGACAAATTATGCCTGCCTAAATCCAAAGGTGGCTTGGGGTTTAAAAATTTGGTAAATTTCAATCAAGCTTTGATTGCCAAGCAGGCCTGGAGATTACTTGTGAAGCCTTATTCTCTTATGGGTCGTGTATTCTGGGGAAAATATTTTGCAGAAAGCTCTTTTCTTGAGGCTAAAATGGGTCATAACCCGTCTTATGTATGGCGTAGCATTCTTTGGGGGAGAGACCTTTTATCTAAAGGGATCCGACGTCGCATTGGGAATGGTTTGGACTCAACTATTTTTTATTGCCCTTGGGTGCCCAGGGAGCCTTCGTTTCGACTATTCACCATTCCCTCTATAGATCATTCAAAGATTGTGGTTGCTGAGCTATTTTCTGTCGATGGTGGGTGGAATGTAGATAAGGTTAAATCTATTGTTTGGCCTATGGATGTTGGTGTCATTCTAGCTGTGCCTATTTGTAAAACAGAGGAGGTTGATAGTTGGATTTGGCATTATACTAAGGATGGGGTGTTCTCAGTGAGAAGTGCGTACAAACTCTTATCTCATGATCTTCCAGAAGCTTCCCCTTCGTCTTCTGATATTATGGATAAATGGTGGAAGTTGGTTTGGAATTTGAATGTCCCAAATAAGTTAAAGTTGTTCATTTGGAGGCTTTTTCATAATTTTTTACCTACTAGAGCTAATCTTGTGCATAAGCATGTATCAATTCCTGTTAATTGTGTAGTTTGTAGAAAGGAAAATGAGAACCTTGACCATACCTTTATAAAGTGCCAGAGAGCGCATTTGGTGTGGCATCAAATTTGTCCTGCAGTTCCTTAGATCTTTCGACGGTCTTTATCCTTCTTGGATGGCCTAATTCGCTTGAGTGACGAGGTCTCTAAGCCTTTGTTTGAGCTTATAAGCGTGACTTTCTGGGCAATTTGGTGTGATAGGAACAAACTATTAGCTGATGAGAAAGTGTCGGGAGTCGATATTCGTATAAATTGGATTAGAAATTACCTGGGTGAATTCCAAAAATCCTATGATGATAAGAAGAAAGTTGTTTCGAAGATTTTTAGATCCGGAAGATGGGAGGCCCCGAACCTGGGATTCTTAAAGCTCAATGTGGATGCTTCTTGTACTAAGGGTAAAGTTGGAGTTGGTGTAGGAGCGGTCGTCCGTGATAACCTGGGTAAATGTTTAGCGGCTTCAGCCTTTTTTCTTCCCCAAATCCTTAATCCCATTAAGGCAGAAGCTCTAGCTCTTATTCATGGGTTGAAGCTGGTTGAGAAGAAAGGGTTGTTCGGAGTTTTGATTGAATCTGACTCTAAGTTGTTGGTAAATTGGGTTCACGATCCTCATATGCTTTCTTCTTCTTTTGGAGTTCTTTTGGCTGAGATTCGTCGTTTGTTGGAAAGTGATAGCTTTATTGAGCTGATAGCTATCCCTAGGGAGGAAAATAATACCGCCCATGTTATTGCCCGATGGGCTTGTAATTCAGGCTTTTCTTTAGACTGGTTTTTGTATTTCCCTCCTTGGCTGGAGAATTTGCTAGTCCTTGATGGGCCTGCTGGTTTTGATCTATAA
mRNA sequence
ATGCCTTGGTTTCTCATTTGGACTGGTATGCCTCTGATCATAGGCCAATTTGTTTATCCATTGATGGATAATGTTCGTGGTCCTCCTCGATTTCACTTTGAGGAATTTTGGGCAGATGACAAGGAGTGTCAGGAAATTGTTAAGCAGATGTGGGGGTTAGAGGCTAATGCAATTAATGGTTTAGACGTCTCGCTTGAGCAACGTAAAGAAAGGTTTTGGGGGTGGGGTAGGAGGAAAAAGGTTGAGAAATGGAGGACTATTAACAGATTGAGGTTGCTTATTAAAGAAGAGTTTGCCAGAAGGGAGCCTTCGTTTCGACTATTCACCATTCCCTCTATAGATCATTCAAAGATTGTGGTTGCTGAGCTATTTTCTGTCGATGGTGGGTGGAATGTAGATAAGGTTAAATCTATTGTTTGGCCTATGGATGTTGGTGTCATTCTAGCTGTGCCTATTTGTAAAACAGAGGAGGTTGATAGTTGGATTTGGCATTATACTAAGGATGGGGTGTTCTCAGTGAGAAGTGCGTACAAACTCTTATCTCATGATCTTCCAGAAGCTTCCCCTTCGTCTTCTGATATTATGGATAAATGGTGGAAGTTGATCTTTCGACGGTCTTTATCCTTCTTGGATGGCCTAATTCGCTTGAGTGACGAGGTCTCTAAGCCTTTGTTTGAGCTTATAAGCGTGACTTTCTGGGCAATTTGGTGTGATAGGAACAAACTATTAGCTGATGAGAAAGTGTCGGGAGTCGATATTCGTATAAATTGGATTAGAAATTACCTGGGTGAATTCCAAAAATCCTATGATGATAAGAAGAAAGTTGTTTCGAAGATTTTTAGATCCGGAAGATGGGAGGCCCCGAACCTGGGATTCTTAAAGCTCAATGTGGATGCTTCTTGTACTAAGGGTAAAGTTGGAGTTGGTGTAGGAGCGGTCGTCCGTGATAACCTGGGTAAATGTTTAGCGGCTTCAGCCTTTTTTCTTCCCCAAATCCTTAATCCCATTAAGGCAGAAGCTCTAGCTCTTATTCATGGGTTGAAGCTGGTTGAGAAGAAAGGGTTGTTCGGAGTTTTGATTGAATCTGACTCTAAGTTGTTGGTAAATTGGGTTCACGATCCTCATATGCTTTCTTCTTCTTTTGGAGTTCTTTTGGCTGAGATTCGTCGTTTGTTGGAAAGTGATAGCTTTATTGAGCTGATAGCTATCCCTAGGGAGGAAAATAATACCGCCCATGTTATTGCCCGATGGGCTTGTAATTCAGGCTTTTCTTTAGACTGGTTTTTGTATTTCCCTCCTTGGCTGGAGAATTTGCTAGTCCTTGATGGGCCTGCTGGTTTTGATCTATAA
Coding sequence (CDS)
ATGCCTTGGTTTCTCATTTGGACTGGTATGCCTCTGATCATAGGCCAATTTGTTTATCCATTGATGGATAATGTTCGTGGTCCTCCTCGATTTCACTTTGAGGAATTTTGGGCAGATGACAAGGAGTGTCAGGAAATTGTTAAGCAGATGTGGGGGTTAGAGGCTAATGCAATTAATGGTTTAGACGTCTCGCTTGAGCAACGTAAAGAAAGGTTTTGGGGGTGGGGTAGGAGGAAAAAGGTTGAGAAATGGAGGACTATTAACAGATTGAGGTTGCTTATTAAAGAAGAGTTTGCCAGAAGGGAGCCTTCGTTTCGACTATTCACCATTCCCTCTATAGATCATTCAAAGATTGTGGTTGCTGAGCTATTTTCTGTCGATGGTGGGTGGAATGTAGATAAGGTTAAATCTATTGTTTGGCCTATGGATGTTGGTGTCATTCTAGCTGTGCCTATTTGTAAAACAGAGGAGGTTGATAGTTGGATTTGGCATTATACTAAGGATGGGGTGTTCTCAGTGAGAAGTGCGTACAAACTCTTATCTCATGATCTTCCAGAAGCTTCCCCTTCGTCTTCTGATATTATGGATAAATGGTGGAAGTTGATCTTTCGACGGTCTTTATCCTTCTTGGATGGCCTAATTCGCTTGAGTGACGAGGTCTCTAAGCCTTTGTTTGAGCTTATAAGCGTGACTTTCTGGGCAATTTGGTGTGATAGGAACAAACTATTAGCTGATGAGAAAGTGTCGGGAGTCGATATTCGTATAAATTGGATTAGAAATTACCTGGGTGAATTCCAAAAATCCTATGATGATAAGAAGAAAGTTGTTTCGAAGATTTTTAGATCCGGAAGATGGGAGGCCCCGAACCTGGGATTCTTAAAGCTCAATGTGGATGCTTCTTGTACTAAGGGTAAAGTTGGAGTTGGTGTAGGAGCGGTCGTCCGTGATAACCTGGGTAAATGTTTAGCGGCTTCAGCCTTTTTTCTTCCCCAAATCCTTAATCCCATTAAGGCAGAAGCTCTAGCTCTTATTCATGGGTTGAAGCTGGTTGAGAAGAAAGGGTTGTTCGGAGTTTTGATTGAATCTGACTCTAAGTTGTTGGTAAATTGGGTTCACGATCCTCATATGCTTTCTTCTTCTTTTGGAGTTCTTTTGGCTGAGATTCGTCGTTTGTTGGAAAGTGATAGCTTTATTGAGCTGATAGCTATCCCTAGGGAGGAAAATAATACCGCCCATGTTATTGCCCGATGGGCTTGTAATTCAGGCTTTTCTTTAGACTGGTTTTTGTATTTCCCTCCTTGGCTGGAGAATTTGCTAGTCCTTGATGGGCCTGCTGGTTTTGATCTATAA
Protein sequence
MPWFLIWTGMPLIIGQFVYPLMDNVRGPPRFHFEEFWADDKECQEIVKQMWGLEANAINGLDVSLEQRKERFWGWGRRKKVEKWRTINRLRLLIKEEFARREPSFRLFTIPSIDHSKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASPSSSDIMDKWWKLIFRRSLSFLDGLIRLSDEVSKPLFELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLAASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIARWACNSGFSLDWFLYFPPWLENLLVLDGPAGFDL
Homology
BLAST of Sed0009869 vs. NCBI nr
Match:
XP_023897447.1 (uncharacterized protein LOC112009345 [Quercus suber])
HSP 1 Score: 149.8 bits (377), Expect = 5.5e-32
Identity = 94/340 (27.65%), Postives = 161/340 (47.35%), Query Frame = 0
Query: 106 RLFTIPSIDHSKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHY 165
RLF P S+ + E W + ++ I +P+D+ VIL +P+ D IW
Sbjct: 812 RLFLHPETKVSEFICQERCC----WKEEIIRQIFFPVDMEVILGIPLSTRFPEDRVIWAE 871
Query: 166 TKDGVFSVRSAYKL---LSHDLPEASPSSSDIMDKWWKLIFRRSLSFLDGLIRLSDEVSK 225
T +G FSVRSAY++ L S SS+ + +WK ++ + +
Sbjct: 872 TSNGGFSVRSAYRVAMGLYQAENAVSASSNSQLQSFWKKLWHLPVP--------HKSFDE 931
Query: 226 PLFELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSKIFRS 285
L+ WA WC+RN++ + + + W+ YL E+ + + V ++ S
Sbjct: 932 EKIILVVTVAWAFWCNRNEIRHGAEKKSPEAIVQWVNRYLLEYSAATESVPAVREEV--S 991
Query: 286 GRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLAASAFFLPQILNPIKAEALA 345
W P LK+NVD + TK VGVGAVVRD G+ +AA + +P L P++ E A
Sbjct: 992 VTWNPPPPSILKVNVDGATTKNLNFVGVGAVVRDEQGRVVAAMSRKIPAPLGPLEVEVKA 1051
Query: 346 LIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSFIELIA 405
GL+L + G +++E DS ++V + + SS+ ++ ++ + +
Sbjct: 1052 FEAGLQLAKDMGYQNIILEGDSLIIVRALCGISLSSSTIDSMIVGMQLFCSDFCTVYVSH 1111
Query: 406 IPREENNTAHVIARWACNSGFSLDWFLYFPPWLENLLVLD 443
+ R+EN AHV+A++A + S+ W P ++ +L D
Sbjct: 1112 VKRQENKPAHVLAKYALSINDSVVWIEETPCCIQQVLNQD 1137
BLAST of Sed0009869 vs. NCBI nr
Match:
XP_017250619.1 (PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus])
HSP 1 Score: 134.4 bits (337), Expect = 2.4e-27
Identity = 98/406 (24.14%), Postives = 171/406 (42.12%), Query Frame = 0
Query: 95 KEEFARREPSFRLFTIPSIDHSKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICK 154
K+ + R PSF T S + K+V + G WN + ++ D+ +IL +P+ +
Sbjct: 1151 KDPWLARPPSFLPITRGSEEEVKVVE---YITGGTWNRELIRQTFLSPDIQLILEIPLSR 1210
Query: 155 TEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASPSSSDIMDKWWK-----------LIF 214
+ DSW WHY G ++V+S YKL+++ + S SS +M KWWK LIF
Sbjct: 1211 FDHADSWFWHYNSQGNYTVKSGYKLVTNLNKDVSSSSEQVMGKWWKYFWANKIPRKILIF 1270
Query: 215 ------------------------------------------------------------ 274
Sbjct: 1271 AWRGYHEILPTTKGLHIRKISLHSNCPLCGYADDSNAHAVFWCPFAQEVWELMTYPFLVG 1330
Query: 275 -RRSLSFLDGLIRLSDEVSKPLFELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYL 334
+ +SF D L+ +++ + K +++ +T W IW +RNKL+ +K W+ Y
Sbjct: 1331 RKEEISFKDVLLYITELLEKDDVDMMLLTTWGIWTERNKLIHQQKRRTPSQIKVWLSAYY 1390
Query: 335 GEFQKSYDDKKKVVSKIFRSGRWEAPNLGF-LKLNVDASCTKGKVGVGVGAVVRDNLGKC 394
E + +Y + + +S+ + + F L VDA+ +K +G+GA + + K
Sbjct: 1391 EEIKNAYVSENRAISRGDPINAHQVEEVSFGSTLFVDAALSKNTERIGLGAAIIASNNKT 1450
Query: 395 LAASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSF 428
A + L IL+ + AEALAL+ GL+ + G + +DS+ LV ++ +
Sbjct: 1451 QATLSKPLEGILSVLHAEALALVVGLQWAQTTGYTLKKVLTDSQSLVQALNSEAEYHNEL 1510
BLAST of Sed0009869 vs. NCBI nr
Match:
XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])
HSP 1 Score: 132.9 bits (333), Expect = 7.0e-27
Identity = 98/411 (23.84%), Postives = 160/411 (38.93%), Query Frame = 0
Query: 120 VAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKL 179
VA + DG W+V + D +IL++PI DSW+WHY K G +SVRS YKL
Sbjct: 1053 VASFITADGNWDVTSISHSFCNEDRDLILSMPISSYNLQDSWLWHYDKRGNYSVRSGYKL 1112
Query: 180 LSHDLPEASPSSSDIMDKWWKLIFR----------------------------------- 239
H A+ +S++ W I++
Sbjct: 1113 YMHLKCNATSASTNYRGTQWNSIWKLTVPTKIKIFIWRSAHEHIPTAQNLLLRGIGELPA 1172
Query: 240 --------------------------------------RSLSFLDGLIRLSDEVSKPLFE 299
++SFL+ L++++
Sbjct: 1173 CTICGDRRESIIHAFFHCKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLN 1232
Query: 300 LISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQ---------KSYDDKKKVVS 359
L ++T W IW DRN L+ ++VS V+ + W+ +L ++ + + VV
Sbjct: 1233 LAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPRTQSNHRPVVQ 1292
Query: 360 KIFRSGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLAASAFFLPQILNPIK 419
W + LKLN DA+C G ++RD+ +AA++ +P L+P+
Sbjct: 1293 ------YWRPSSSVSLKLNTDAACR--GASTSFGCIIRDSSCSLVAATSIRVPFPLSPLL 1352
Query: 420 AEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSF 448
AE ++ GLK + +ESDS L + + + + EI+ L +F
Sbjct: 1353 AEIRCILEGLKFAAASNFTHLEVESDSLLAIQLIRNEIHTRGDEQNWVMEIQALTCCFAF 1412
BLAST of Sed0009869 vs. NCBI nr
Match:
KAF4383359.1 (hypothetical protein G4B88_023933 [Cannabis sativa])
HSP 1 Score: 131.3 bits (329), Expect = 2.0e-26
Identity = 96/368 (26.09%), Postives = 158/368 (42.93%), Query Frame = 0
Query: 108 FTIPSIDH--SKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHY 167
FT+P+ +++ + L +G W +++ S + DV +L + K E D+ W
Sbjct: 16 FTVPTKVQVPAEVTIQTLIIEEGEWKTEEIASCLHKEDVPWVLGITPSK-ETNDTIGWSR 75
Query: 168 TKDGVFSVRSAYKLLSHDLPEASPSSSDIMDKWWKL------------------------ 227
T +G ++V S YKL D A S + WWK
Sbjct: 76 TINGQYTVASGYKLRFRDPNIAEYSDNSANKAWWKSHVEDVCRALWNCPKLHNVWKHFGF 135
Query: 228 --IFRRSLSFL-DGLIRLSDEVSKPLFELISVTFWAIWCDRNKLLADEKVSGVDIRINWI 287
F SL D L+ + ++SK F W IW RNK + K I I W
Sbjct: 136 IHQFPSSLRHAPDFLMVMKGKLSKEEFIFFIGITWLIWFRRNKCIFQNKDIEDSIWIPWA 195
Query: 288 RNYLGEFQKSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNL 347
L E ++ K W +P LG +N DAS G+ G G+G ++RD+L
Sbjct: 196 MEML-ELHLAFAHKDSHQKPSKDKVSWSSPPLGSFMINTDASLIDGQPGCGLGVIIRDHL 255
Query: 348 GKCLAASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLS 407
G + A+ ++P L+ + AE LA+ LKL + + + I SDS+ ++ + ++
Sbjct: 256 GALVTAATDYIPGCLSVLVAETLAIRLALKLAATRSMQNIFIASDSQSVITALKGQTRIN 315
Query: 408 SSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIARWACNSGFSLDWFLYFPPWLENL 447
+ +G+++ + ++ + + I IPR+ NN AH +A W+ S W + P
Sbjct: 316 TDWGIIIEDCILASKNFNNLSFIFIPRKCNNVAHCLANWSRLVHVSDVWTSFLPDCAAAS 375
BLAST of Sed0009869 vs. NCBI nr
Match:
KAG8363091.1 (hypothetical protein BUALT_BualtUnG0005200 [Buddleja alternifolia])
HSP 1 Score: 130.2 bits (326), Expect = 4.5e-26
Identity = 104/409 (25.43%), Postives = 168/409 (41.08%), Query Frame = 0
Query: 11 PLIIGQFVYPLMDNV---RGPPRFHFEEFWADDKECQEIVKQMWGLEANAINGLDVSLEQ 70
P++I P +D+V RG F FE +W EC +++++ W +++ + + Q
Sbjct: 225 PILIKSLPPPRVDSVRQGRGRRPFRFEAWWIRSDECGKVIRESW--NSSSESDPQAKVYQ 284
Query: 71 RKERFWGWGRRKKVEKWRTINRLRLLIKEEFARREPSFRLFTIPSIDHSKIVVAELFSVD 130
E W R ++ I LL P +FT+ + HS++
Sbjct: 285 NLEECHRWIPRPNT--FKLITNCNLL--------PPDAMVFTL-IVPHSRL--------- 344
Query: 131 GGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEA 190
WN + ++++ WP D IL++P+ + DS IWHY+K+G+FSV+SAY + + E
Sbjct: 345 --WNEELIQNVFWPPDATSILSIPLARYSCPDSLIWHYSKNGLFSVKSAYHVARSLITED 404
Query: 191 SPSSSDIMDKWWKLIFRRSLSFLDGLIRLSDEVSKPLFELISVTFWAIWCDRNKLLADEK 250
PS S W+ I+ L I V W +
Sbjct: 405 GPSRSSSSSADWRFIWGAKLP-----------------HKIRVFIW-------------R 464
Query: 251 VSGVDIRINWIRNYLGEFQKSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVDASCTKGKVG 310
VS I W P+ +KLN D + + G
Sbjct: 465 VSAATI----------------------------PSFWSCPSSPCIKLNFDGAMFNQENG 524
Query: 311 VGVGAVVRDNLGKCLAASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLL 370
+GVG + R++ G C+A F P + N AEAL L+L +KG + IE D ++
Sbjct: 525 IGVGVIARNSFGACIAWLTRFYPNLDNSEYAEALGAREALELAIRKGWESITIEGDCGVV 551
Query: 371 VNWVHDPHMLSSSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIAR 417
++ + P SS L+++I+ L S S I + R N AH +AR
Sbjct: 585 LSKIGSPDTDYSSIASLISDIKLLSFSFSCICFSQVGRSGNCAAHALAR 551
BLAST of Sed0009869 vs. ExPASy TrEMBL
Match:
A0A803Q0L5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 146.4 bits (368), Expect = 2.9e-31
Identity = 111/404 (27.48%), Postives = 182/404 (45.05%), Query Frame = 0
Query: 75 WGRRKKVE--KWRTINRLRLLIKEE-FARREPSFRLFTIPSIDHSKIVVAELFSVDGGWN 134
WG++ V +WR N + + E+ + R +F+++ P + + +VVA++ DG W+
Sbjct: 494 WGKKVIVNGYRWRVGNGENVRVLEDPWLPRPVTFKIYDKPPLP-ANMVVADMKHGDGSWD 553
Query: 135 VDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASPSS 194
++ + D +IL++P E D +WHY+K+G ++V+S YK+ S + E S+
Sbjct: 554 SIFIQEVFNSDDAELILSMPSTGWELEDKIMWHYSKNGEYTVKSGYKMASSLVEEQYQSN 613
Query: 195 SDIMDKWWKLIFRRSL-----------------------------------SFLDGLIRL 254
++ WWK ++R + F D + RL
Sbjct: 614 DKVLVDWWKALWRFKIPPKIKHFVWKLAYNWLPTNVTLAKRGGSKEFWAVSGFKDEMKRL 673
Query: 255 SDE------------VSKPLFELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGE 314
DE K FE V W IW RN ++ ++W R YL E
Sbjct: 674 KDEDVLSFLMRMARQWDKGKFEFFLVLTWNIWNIRNSVIHGGIAPMAGEMVDWCRKYLTE 733
Query: 315 FQKSYDDKKKVVSKIFR-SGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLA 374
F+ VS++ R + +W AP LG +K+NVDA G G+G V+RD+ G+ L
Sbjct: 734 FE---GGGATAVSRVRRENSKWGAPELGRMKINVDARVKSGGGVSGIGCVIRDSGGRTLY 793
Query: 375 ASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGV 428
AS+ + Q L P++ E A++ GL++ + + IESD V +
Sbjct: 794 ASSAVVHQELAPLQLELQAILVGLQVGIHRKIHRFSIESDCLQAVQLIQRKDEGCFDVDC 853
BLAST of Sed0009869 vs. ExPASy TrEMBL
Match:
A0A803QQT2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 138.3 bits (347), Expect = 8.0e-29
Identity = 109/446 (24.44%), Postives = 185/446 (41.48%), Query Frame = 0
Query: 75 WGRR--KKVEKWRTINRLRLLIKEE-FARREPSFRLFTIPSIDHSKIVVAELFSVDGGWN 134
WG++ K +WR N + + E+ + R +F+++ PS+ + + V +L DG W+
Sbjct: 260 WGKKLILKGYRWRVGNGESVRVLEDPWLPRPVTFKVYDQPSLP-ANLYVTDLKLADGQWD 319
Query: 135 VDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASPSS 194
++SI P DV +IL +P + D +WHY+K G +SV+S Y++ + E S+
Sbjct: 320 EGFIRSIFNPTDVDLILGIPCSDWDFEDKILWHYSKYGEYSVKSGYRMAASFTTEQHQSN 379
Query: 195 SDIMDKWWKLIFR-------------------------------------RSLSFLDG-- 254
+ +WWK ++R R S +D
Sbjct: 380 EHSIVQWWKKLWRLKIPPKVKHFVWKVAHNWLPANVNLAKRGIASSVVCSRCSSHVDESV 439
Query: 255 ----------------------------------LIRLSDEVSKPLFELISVTFWAIWCD 314
L+R++ E K E + W IW
Sbjct: 440 AHALWECKASKGYWRVSGLYDDLKQMLGEDNLTMLMRIAAEWDKEKLEFFLLVSWNIWNV 499
Query: 315 RNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVD 374
RN ++ + I W N+L +F+ D ++ + RW P + +NVD
Sbjct: 500 RNTVVHGGYHPKPEEMIEWCGNFLADFRG--DTGRERSQRSSEDSRWVPPARDQVTINVD 559
Query: 375 ASCTKGKVGVGVGAVVRDNLGKCLAASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGV 434
A +G + G+G VVRD G L+A+A L Q L P++ E +A+ G+++ ++ L
Sbjct: 560 AGVKQGGLISGLGYVVRDAAGVVLSAAATVLQQELPPLQLELMAIKKGIQVGIQQRLQRF 619
Query: 435 LIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIARWA 445
+E+D V+ + + LL IR L+ DSF+ + + RE N AH +A +A
Sbjct: 620 SVETDCLQAVHLIQNKENGCRDIDGLLNHIRALISYDSFVGISFVFREANRVAHALANYA 679
BLAST of Sed0009869 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 132.9 bits (333), Expect = 3.4e-27
Identity = 98/411 (23.84%), Postives = 160/411 (38.93%), Query Frame = 0
Query: 120 VAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKL 179
VA + DG W+V + D +IL++PI DSW+WHY K G +SVRS YKL
Sbjct: 1053 VASFITADGNWDVTSISHSFCNEDRDLILSMPISSYNLQDSWLWHYDKRGNYSVRSGYKL 1112
Query: 180 LSHDLPEASPSSSDIMDKWWKLIFR----------------------------------- 239
H A+ +S++ W I++
Sbjct: 1113 YMHLKCNATSASTNYRGTQWNSIWKLTVPTKIKIFIWRSAHEHIPTAQNLLLRGIGELPA 1172
Query: 240 --------------------------------------RSLSFLDGLIRLSDEVSKPLFE 299
++SFL+ L++++
Sbjct: 1173 CTICGDRRESIIHAFFHCKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLN 1232
Query: 300 LISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQ---------KSYDDKKKVVS 359
L ++T W IW DRN L+ ++VS V+ + W+ +L ++ + + VV
Sbjct: 1233 LAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPRTQSNHRPVVQ 1292
Query: 360 KIFRSGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLAASAFFLPQILNPIK 419
W + LKLN DA+C G ++RD+ +AA++ +P L+P+
Sbjct: 1293 ------YWRPSSSVSLKLNTDAACR--GASTSFGCIIRDSSCSLVAATSIRVPFPLSPLL 1352
Query: 420 AEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSF 448
AE ++ GLK + +ESDS L + + + + EI+ L +F
Sbjct: 1353 AEIRCILEGLKFAAASNFTHLEVESDSLLAIQLIRNEIHTRGDEQNWVMEIQALTCCFAF 1412
BLAST of Sed0009869 vs. ExPASy TrEMBL
Match:
A0A7J6GMP0 (RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_023933 PE=4 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 9.8e-27
Identity = 96/368 (26.09%), Postives = 158/368 (42.93%), Query Frame = 0
Query: 108 FTIPSIDH--SKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHY 167
FT+P+ +++ + L +G W +++ S + DV +L + K E D+ W
Sbjct: 16 FTVPTKVQVPAEVTIQTLIIEEGEWKTEEIASCLHKEDVPWVLGITPSK-ETNDTIGWSR 75
Query: 168 TKDGVFSVRSAYKLLSHDLPEASPSSSDIMDKWWKL------------------------ 227
T +G ++V S YKL D A S + WWK
Sbjct: 76 TINGQYTVASGYKLRFRDPNIAEYSDNSANKAWWKSHVEDVCRALWNCPKLHNVWKHFGF 135
Query: 228 --IFRRSLSFL-DGLIRLSDEVSKPLFELISVTFWAIWCDRNKLLADEKVSGVDIRINWI 287
F SL D L+ + ++SK F W IW RNK + K I I W
Sbjct: 136 IHQFPSSLRHAPDFLMVMKGKLSKEEFIFFIGITWLIWFRRNKCIFQNKDIEDSIWIPWA 195
Query: 288 RNYLGEFQKSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNL 347
L E ++ K W +P LG +N DAS G+ G G+G ++RD+L
Sbjct: 196 MEML-ELHLAFAHKDSHQKPSKDKVSWSSPPLGSFMINTDASLIDGQPGCGLGVIIRDHL 255
Query: 348 GKCLAASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLS 407
G + A+ ++P L+ + AE LA+ LKL + + + I SDS+ ++ + ++
Sbjct: 256 GALVTAATDYIPGCLSVLVAETLAIRLALKLAATRSMQNIFIASDSQSVITALKGQTRIN 315
Query: 408 SSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIARWACNSGFSLDWFLYFPPWLENL 447
+ +G+++ + ++ + + I IPR+ NN AH +A W+ S W + P
Sbjct: 316 TDWGIIIEDCILASKNFNNLSFIFIPRKCNNVAHCLANWSRLVHVSDVWTSFLPDCAAAS 375
BLAST of Sed0009869 vs. ExPASy TrEMBL
Match:
M5VP36 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa014760mg PE=4 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 9.8e-27
Identity = 105/414 (25.36%), Postives = 177/414 (42.75%), Query Frame = 0
Query: 92 LLIKEEFARREPSFRLFTIPSIDHSKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVP 151
L+ + + R SFRL + P + + V++ G WNVD + DV I ++P
Sbjct: 32 LVYGDAWIPRPNSFRLVS-PQVLDQETKVSDFIFPTGIWNVDLLNLCFHEGDVKAIKSIP 91
Query: 152 ICKTEEVDSWIWHYTKDGVFSVRSAYKL---LSHDLPEASPSSSD--IMDKWWKLIF--- 211
+ D W+WHYT +G++SV+S Y+L D A SSS+ + + +W+ ++
Sbjct: 92 LSVNYHKDRWMWHYTTNGIYSVKSGYRLEISKKKDCSGAVGSSSEPRVQNAFWRKVWSQE 151
Query: 212 -------------RRSLSFLDGLI--RLSDEVSKP------------------------- 271
+ L L+ ++ E S P
Sbjct: 152 VPQKILYFTWRAIKNYLPCRSNLLKRKIISEDSCPICNVNSESVIHALWSCPNAQKVWKK 211
Query: 272 -----------------LFELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQ 331
LFE+ ++ ++W +RNK + + + D+ N + GE+
Sbjct: 212 VLFRGVFTGLKFFNYGDLFEIATMYLSSLWQNRNKAVIEGRSCAQDVIFNRAHHLAGEYG 271
Query: 332 KSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLAASA 391
+ + K+ + + +W P G KLNVD + G+GAVVR++ G+ +AA A
Sbjct: 272 SLVEGEPKLFEE--KPTKWSPPLAGKYKLNVDTAFIPETGVGGIGAVVRNDKGEVMAAMA 331
Query: 392 FFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWV-HDPHMLSSSFGVLL 440
L + AE +A + +K G +LIESDS+ VN V D +S G L+
Sbjct: 332 LPLASATSSKHAEIMAFLFWMKFARDAGFSSILIESDSQGAVNDVKKDEEESWASDGHLI 391
BLAST of Sed0009869 vs. TAIR 10
Match:
AT4G09775.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT2G02650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 56.6 bits (135), Expect = 5.9e-08
Identity = 35/140 (25.00%), Postives = 63/140 (45.00%), Query Frame = 0
Query: 233 WAIWCDRNKLLADE------KVS--GVDIRINWIRNYLGEFQKSYDDKKKVVSKIFRSGR 292
W +W RN+ L + KV+ G W+ + + S+ ++ RS
Sbjct: 2 WRLWKSRNEFLFQQIDRFPWKVAQKGEQEATEWVETTINDTANSHSTEQPNDRPSGRSKE 61
Query: 293 WEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLAASAFFLPQILNPIKAEALALI 352
W P G+LK N D+ +G+ ++RD+ G + + L Q + ++AEAL +
Sbjct: 62 WSPPPEGYLKCNFDSGYVQGRDYTSTCWIIRDSNGHVIHSGCAKLQQSYSALQAEALGFL 121
Query: 353 HGLKLVEKKGLFGVLIESDS 365
H L++V +G V E ++
Sbjct: 122 HALQMVWIRGYRYVWFEGEN 141
BLAST of Sed0009869 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 51.6 bits (122), Expect = 1.9e-06
Identity = 29/96 (30.21%), Postives = 48/96 (50.00%), Query Frame = 0
Query: 115 HSKIVVAELFSVDGG---WNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVF 174
+ ++ + LF G W+ K+ V D G I + + K+++ D IW+Y G +
Sbjct: 70 YKEMTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEY 129
Query: 175 SVRSAYKLLSHD----LPEASP--SSSDIMDKWWKL 202
+VRS Y LL+HD +P +P S D+ + W L
Sbjct: 130 TVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNL 165
BLAST of Sed0009869 vs. TAIR 10
Match:
AT2G22440.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1); Has 208 Blast hits to 191 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 49.7 bits (117), Expect = 7.2e-06
Identity = 28/117 (23.93%), Postives = 58/117 (49.57%), Query Frame = 0
Query: 130 WNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASP 189
W +D++++++ P+D+ +IL + +T D + W +TK G ++V+S Y ++ DL + P
Sbjct: 43 WKLDRLQALIDPVDIPLILGIRPSRTYLSDGFSWSHTKSGNYTVKSGY-WVARDL--SRP 102
Query: 190 SSSDIMDKWWKLIFRRSLSFLDGLIRLSDE---VSKPLFELISVTFWAIWCDRNKLL 244
+ + R SL + + D + + + EL W IW +N+ +
Sbjct: 103 TCDPPFQGPGNIFPRNSLFYNFDFLFWRDREFGIGEKVLELFPWIIWYIWKSKNRFV 156
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023897447.1 | 5.5e-32 | 27.65 | uncharacterized protein LOC112009345 [Quercus suber] | [more] |
XP_017250619.1 | 2.4e-27 | 24.14 | PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus] | [more] |
XP_022158377.1 | 7.0e-27 | 23.84 | uncharacterized protein LOC111024874 [Momordica charantia] | [more] |
KAF4383359.1 | 2.0e-26 | 26.09 | hypothetical protein G4B88_023933 [Cannabis sativa] | [more] |
KAG8363091.1 | 4.5e-26 | 25.43 | hypothetical protein BUALT_BualtUnG0005200 [Buddleja alternifolia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A803Q0L5 | 2.9e-31 | 27.48 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803QQT2 | 8.0e-29 | 24.44 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A6J1DX30 | 3.4e-27 | 23.84 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A7J6GMP0 | 9.8e-27 | 26.09 | RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_023933 PE=... | [more] |
M5VP36 | 9.8e-27 | 25.36 | Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa014760m... | [more] |
Match Name | E-value | Identity | Description | |
AT4G09775.1 | 5.9e-08 | 25.00 | BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily prot... | [more] |
AT3G09510.1 | 1.9e-06 | 30.21 | Ribonuclease H-like superfamily protein | [more] |
AT2G22440.1 | 7.2e-06 | 23.93 | BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily prot... | [more] |