ClCG09G021100 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG09G021100
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr09: 38135065 .. 38135700 (+)
RNA-Seq ExpressionClCG09G021100
SyntenyClCG09G021100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATTTTCTGCTTTCCAAGATTGGCTGAAGGTATGAAGAGCCTTGGAGTGGTGACATAGGTGGAAGAACTAGTTCAGAATGGAAATATAAACCAGTTTGCTCAGAGAACACTGCTGTATTGGCCTGTATCGACTCAGACGACAGCCTTCGAAATTCTTTCTGCTCTCTCAACTCCTTAGCTTTCTGCAATTGTCTAAATCTTTCCTGCAGCAAGGCGATGGAGGAGTTCATTGCTCTGGCATTACAGTTTTCACTACTCATTGTCAAAAGAAAAGAAAGAAAAAAAAAAAAAAAAAAAAGGGAAAAAAAGAAGGAAAAAAAAAAGTCAATCTCCAACGCTTGGCCAACAAGACCTGTCAGGTAGCTCTTTGAGGAATGTTTGAATATTTGTATCTCTATTTATAGGACATGGGTAGGTGATATTTTGAGAAGATTAATAGATGTATTAGTTAAGTTTAAGCTTTCGATTAGATTTTGAATCGCGAAAATAAAGGGAAGAAGCAGGTGCCAAGATGGAAAGGCCAAGTAGAACTAGCCAGGAGCAAAGCTGAGTTTTTGGTTGTTGGATGTGAAGAAGGCAGAGACTTCCAAGGAGAGAGAGGGATTGAGAGGCAGGAATGTAGCTTTTGTAGG

mRNA sequence

ATGAGATTTTCTGCTTTCCAAGATTGGCTGAAGATTTTGAATCGCGAAAATAAAGGGAAGAAGCAGGTGCCAAGATGGAAAGGCCAAGTAGAACTAGCCAGGAGCAAAGCTGAGTTTTTGGTTGTTGGATGTGAAGAAGGCAGAGACTTCCAAGGAGAGAGAGGGATTGAGAGGCAGGAATGTAGCTTTTGTAGG

Coding sequence (CDS)

ATGAGATTTTCTGCTTTCCAAGATTGGCTGAAGATTTTGAATCGCGAAAATAAAGGGAAGAAGCAGGTGCCAAGATGGAAAGGCCAAGTAGAACTAGCCAGGAGCAAAGCTGAGTTTTTGGTTGTTGGATGTGAAGAAGGCAGAGACTTCCAAGGAGAGAGAGGGATTGAGAGGCAGGAATGTAGCTTTTGTAGG

Protein sequence

MRFSAFQDWLKILNRENKGKKQVPRWKGQVELARSKAEFLVVGCEEGRDFQGERGIERQECSFCR
Homology
[Close]
BLAST of ClCG09G021100 vs. NCBI nr
Match: KAE8645980.1 (hypothetical protein Csa_015455 [Cucumis sativus])

HSP 1 Score: 63.2 bits (152), Expect = 9.8e-07
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0 

Query: 12 ILNRENKGKKQVPRWKGQVELARSKAEFLVVGCEEGRDFQGERGIERQECSF 64
          ILNRENKGKKQVPRWKGQVE+ARSKAEF ++  ++    +   G+  +  +F
Sbjct: 15 ILNRENKGKKQVPRWKGQVEMARSKAEFWLLDVKKAETSKEREGLRGRNVAF 66

[Close]
BLAST of ClCG09G021100 vs. ExPASy TrEMBL
Match: A0A0A0LDZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G769690 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.8e-07
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0 

Query: 12 ILNRENKGKKQVPRWKGQVELARSKAEFLVVGCEEGRDFQGERGIERQECSF 64
          ILNRENKGKKQVPRWKGQVE+ARSKAEF ++  ++    +   G+  +  +F
Sbjct: 15 ILNRENKGKKQVPRWKGQVEMARSKAEFWLLDVKKAETSKEREGLRGRNVAF 66

The following BLAST results are available for this feature:
BLAST of ClCG09G021100 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8645980.19.8e-0755.77hypothetical protein Csa_015455 [Cucumis sativus][more]
BLAST of ClCG09G021100 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG09G021100 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDZ24.8e-0755.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G769690 PE=4 SV=1[more]
BLAST of ClCG09G021100 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG09G021100.1ClCG09G021100.1mRNA