ClCG07G007450.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview
NameClCG07G007450.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr07: 19356357 .. 19358969 (+)
Sequence length732
RNA-Seq ExpressionClCG07G007450.1
SyntenyClCG07G007450.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCGATATACAAACCTGTCGAGACACTTATAGGGCGCACCAGCACCATCGGGCCTCTTCTCGTGTAGTCTGGCGCCTTCGAGGTTTGTCCAGAGGCTTTCGGAGACGTGCAGGCCTTGGGCGAGGAGTCGGGTCCTCTCTGAAGTCTTCTAGTGACATCCGAGCATGTCAGGCACCTCGACATAGTGATAAGCACTTGAAAAGTGCTTTCTATCCTCTCAAATTAAGGGAGATTATATTAGATTTCACTTGTTTGCTAGTGGTTTTCAAGTTAAAATGAGAAACATTAGAAGAAAAGACCAAAAGATCAAAACCGAGCAAGAATACGGCGAAAAAGAGATGAAAAACTCAAAATGGCAAACATTAGGGCAACGTCGCGGCGCTAAAACCCGAGAGCAACAATTCTGAACGCATCACAGCGTCGCGGCGCTAAAACCCGAGAGCAACAATTCTAAATGCATCATAGCTCGCAGTGCTTGGGCGCTGCCACAACGGTAAAACCTGAAAGCAACAATTTTGGACACAACCCTAGCACCGCAGCGCCAGTATTCCATAAATGAAAATTTGTTATTTTTGGTAAGTTTTTGGGCGGCCAGCTCTATAAATTTGGGGGTTTCTAGTAGTTCTAATAATCAATCAACCATCAATTTACAAACCAAAAGAGGCACAAGAAGGAGAAAATTGAGTGAGAGTTCATAAAAGAGTTCAAGGAGTGAGTTAGTTGCAAGGAAGAGGAAAATAGTTCGAGATAGTCGTGGTGCCATTCGAATTGCGACGTGAGAGCCAAGGAGATTGTGACGGTGCTACCTCAATCAACCTTGTTGAACGCATAGTAGCATCGCGGCGCCGAGATAGCGCTGCCTCGACGCAACCTTATTGAACGCATGACAACGTCGCGACGCTTAGACGGCCCTGCCAAGGCGCTAATGCCCGAGAACAATATTTCTGAAACGCATCACAACGTCGCGGTGCTTGGACGGCGCTGCCACGGCGTTAAAACTCGAAAGCAACAATTTTGGATGCAGCCCTAGCAGTGCCGCGGTGCCAGCTTTTCTTAAATGAAAAAATGTTATTTTTGGTAAATTTTTGGGCAACCAAACTCTATAAATTTTGGGGTTTCCAGCAGCCCAAATCATAAAAGAAAATCAAAGCAAAGCAAGGAAGTTACAGACCTAAAGAGGCACAAAAAGGAGAGAATTAAGTGAGAGTTCAAAGAGTGAGTTAGTTGCAAGGAAGAGGGAAAGAGTTCGAGATCGTCTTGGTGCTCTTCGAATTTCGACGTGAGAGCCAAGGAGATCGTGACGGTGCTACCTCAATCAAGAGCCTCTTTTCAGTAAAGTTTCCCTTTCCTTACACTCTTTCTTTGTTTATTTTGCTTAAACATGTTGCTTCAAGCATAAGTGGCTAAACTCTTTAGTTTTAGGGTTTTGATGAATTGTTTATGAATTTTATGTTGATATTGTAGACTTTCATTGTTTTGTTGGAATGATTATGCTTTTCATTGTTATTGTGTTTAATTCTTGTGGATTGACCATCTTCACATGTTAGGTTAGATGTATGATTGAGAGATTGTATGTTTAACTTGATCTATAACAATGAATTGTTGTTAATCTATCACGAGAGTAATTAGGTTGACAATAAAAGTTGCTAAAGACTATTCTTAGTGTCATGTAATTTGTATTGGTTTCAAGAGATTAGTAATCAATCGAGTTGCATGAGAAAGGGTTGTTTTTGGGAGAAAATACCTTGGAATTAAGTTTCTAGACTTAGGCATATGAATGACAATAAAATCCATGAAATCTATAATATTGCATGATGAAATAAACAAGGATTCATTACCCTAGAACTCTCTTTGACTCTTGTGTTTCTCACTTTAATACTTTTCTTATTTGGTTTATATTTTCCATAATTAACAACTTCAATTCCAATCCTCAAATAAAATTGATTCAACTCTAGAATAGCTAAGTAACTTAAACCTTCACAATTGGATCTTCAGTGTAACGATATTTGGACTTCACCGTCTTATATTATAACTTGACCCGTACACTTGCGGTTAACACTAAAAGTGCGAATCACATAGGCGCTGGCACCACCCAATATCTTGCCCATCCTTCCAGACATTCCTAGACATGTGTTGAGGCTTCTGGCCTTATCCCGAGTCTTCTAGAATGTTCTGGGACCTTCAAGGCGCGCGCACAGGGCTAGCGATAGGCAAGCGCCTTGGTCGTGCGCAGGGTGCACACGACGAGCATCCATGCTGTCAGGCAAACGCGCAATGCTGCCTACCCTAGTAGGCAGGCACGCACACTGCACAACCATGGCTGGTTACGTAACCACTTGACCATGTGCAGGGGCACATGGGCATCCAACGAGGTGCTTGATGGGGCATTTGTCCTCGGTTGTGGCGCACACCTAATGCATGGGAGTAGCCTACGGACATGGGCAACCATTCTGTGTGCCTTGGCACTTACATGTGCCATGCTTAAGGGCGTTATTGCCCTTCCTCTTTGACCCATCCTCGGTGTTGCTAGACTAGTCATGGGCACTTATGGCGCACTTTGTTGGGTCATTTTCGCGGTATGTGACATTATGGCTTTTTGATTTGTCGTGA

mRNA sequence

ATGACCGATATACAAACCTGTCGAGACACTTATAGGGCGCACCAGCACCATCGGGCCTCTTCTCGTGTAGTCTGGCGCCTTCGAGGTTTGTCCAGAGGCTTTCGGAGACGTGCAGGCCTTGGGCGAGGAGTCGGGTCCTCTCTGAAGTCTTCTAGTGACATCCGAGCATGTCAGGCACCTCGACATAGTGATAAGCACTTGAAAAACGGCCCTGCCAAGGCGCTAATGCCCGAGAACAATATTTCTGAAACGCATCACAACGTCGCGTTGCAAGGAAGAGGGAAAGAGTTCGAGATCGTCTTGGTGCTCTTCGAATTTCGACGTGAGAGCCAAGGAGATCGTGACGGTGCTACCTCAATCAAGAGCCTCTTTTCAAATGTTCTGGGACCTTCAAGGCGCGCGCACAGGGCTAGCGATAGGCAAGCGCCTTGGCAAACGCGCAATGCTGCCTACCCTAGTAGGCAGGCACGCACACTGCACAACCATGGCTGGTTACGTAACCACTTGACCATGTGCAGGGGCACATGGGCATCCAACGAGGTGCTTGATGGGGCATTTGTCCTCGGTTGTGGCGCACACCTAATGCATGGGAGTAGCCTACGGACATGGGCAACCATTCTGTGTGCCTTGGCACTTACATGTGCCATGCTTAAGGGCTCATGGGCACTTATGGCGCACTTTGTTGGGTCATTTTCGCGGTATGTGACATTATGGCTTTTTGATTTGTCGTGA

Coding sequence (CDS)

ATGACCGATATACAAACCTGTCGAGACACTTATAGGGCGCACCAGCACCATCGGGCCTCTTCTCGTGTAGTCTGGCGCCTTCGAGGTTTGTCCAGAGGCTTTCGGAGACGTGCAGGCCTTGGGCGAGGAGTCGGGTCCTCTCTGAAGTCTTCTAGTGACATCCGAGCATGTCAGGCACCTCGACATAGTGATAAGCACTTGAAAAACGGCCCTGCCAAGGCGCTAATGCCCGAGAACAATATTTCTGAAACGCATCACAACGTCGCGTTGCAAGGAAGAGGGAAAGAGTTCGAGATCGTCTTGGTGCTCTTCGAATTTCGACGTGAGAGCCAAGGAGATCGTGACGGTGCTACCTCAATCAAGAGCCTCTTTTCAAATGTTCTGGGACCTTCAAGGCGCGCGCACAGGGCTAGCGATAGGCAAGCGCCTTGGCAAACGCGCAATGCTGCCTACCCTAGTAGGCAGGCACGCACACTGCACAACCATGGCTGGTTACGTAACCACTTGACCATGTGCAGGGGCACATGGGCATCCAACGAGGTGCTTGATGGGGCATTTGTCCTCGGTTGTGGCGCACACCTAATGCATGGGAGTAGCCTACGGACATGGGCAACCATTCTGTGTGCCTTGGCACTTACATGTGCCATGCTTAAGGGCTCATGGGCACTTATGGCGCACTTTGTTGGGTCATTTTCGCGGTATGTGACATTATGGCTTTTTGATTTGTCGTGA

Protein sequence

MTDIQTCRDTYRAHQHHRASSRVVWRLRGLSRGFRRRAGLGRGVGSSLKSSSDIRACQAPRHSDKHLKNGPAKALMPENNISETHHNVALQGRGKEFEIVLVLFEFRRESQGDRDGATSIKSLFSNVLGPSRRAHRASDRQAPWQTRNAAYPSRQARTLHNHGWLRNHLTMCRGTWASNEVLDGAFVLGCGAHLMHGSSLRTWATILCALALTCAMLKGSWALMAHFVGSFSRYVTLWLFDLS
Homology
The following BLAST results are available for this feature:
BLAST of ClCG07G007450.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG07G007450.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG07G007450.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG07G007450.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..71

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG07G007450ClCG07G007450gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG07G007450.1-exonClCG07G007450.1-exon-CG_Chr07:19356357..19356561exon
ClCG07G007450.1-exonClCG07G007450.1-exon-CG_Chr07:19357265..19357326exon
ClCG07G007450.1-exonClCG07G007450.1-exon-CG_Chr07:19357584..19357691exon
ClCG07G007450.1-exonClCG07G007450.1-exon-CG_Chr07:19358526..19358581exon
ClCG07G007450.1-exonClCG07G007450.1-exon-CG_Chr07:19358623..19358848exon
ClCG07G007450.1-exonClCG07G007450.1-exon-CG_Chr07:19358895..19358969exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG07G007450.1-cdsClCG07G007450.1-cds-CG_Chr07:19356357..19356561CDS
ClCG07G007450.1-cdsClCG07G007450.1-cds-CG_Chr07:19357265..19357326CDS
ClCG07G007450.1-cdsClCG07G007450.1-cds-CG_Chr07:19357584..19357691CDS
ClCG07G007450.1-cdsClCG07G007450.1-cds-CG_Chr07:19358526..19358581CDS
ClCG07G007450.1-cdsClCG07G007450.1-cds-CG_Chr07:19358623..19358848CDS
ClCG07G007450.1-cdsClCG07G007450.1-cds-CG_Chr07:19358895..19358969CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG07G007450.1ClCG07G007450.1-proteinpolypeptide