ClCG04G004690 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG04G004690
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Replication factor C subunit 3
Location	CG_Chr04: 17791018 .. 17796850 (+)
RNA-Seq Expression	ClCG04G004690
Synteny	ClCG04G004690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAATTTTGAAAAGTATTGGGGTATTTTATGTATTTTTTTATAGTTTGAGAGGCACAGCCTACTGCTGGGGCTCTCGCTTCCTCTTCTCATCAGTCATCAGTTCTGTTTCTTTTTCCCGCCATTTCAAGCCTCGCCTAAGCCTTTGCTCTCTCCTTCACACACACTTCTTTTTTCGCTTTGTCACGATCTTAAATCTCCAAACACCGAAGAAGATGTTGTGGGTCGACAAGTATCGTCCAAAAACCCTAGACCAGATCACAGTTCACCAAGACGTAGCACAGAATCTTAAGAAATTGGTAACCAAATTTTGTTGTTACTTTTTCCTTCCATTCCTTATTTCAGACTTCAATTTGGCGTTTTTGATTTGGGTTTTCCGTAAATCTTCTTCTAGGTTACAGAACAGGACTGCCCTCATTTGCTCTTCTATGGCCCCTCCGGTTCCGGAAAGAAAACCCTAGTCATGGCCCTTATCCGGCAGATGTTCGGAGCCAGTGCGGATAAGGTATTGCCTCTATTCTGTTTCTTTTTCTTTTTTAATTCTGGGAAATTGTGTGATTGTTTTTTTTTTTTTTTTTTTGTTTTTTCTGNCCTTCCATTCCTTATTTCAGACTTCAATTTGGCGTTTTTGATTTGGGTTTTCCGTAAATCTTCTTCTAGGTTACAGAACAGGACTGCCCTCATTTGCTCTTCTATGGCCCCTCCGGTTCCGGAAAGAAAACCCTAGTCATGGCCCTTATCCGGCAGATGTTCGGAGCCAGTGCGGATAAGGTATTGCCTCTATTCTGTTTCTTTTTCTTTTTTAATTCTGGGAAATTGTGTGATTGTTTTTTTTTTTTTTTTTTTGTTTTCTCTGACTGTTTGTTGCGTTTGATCCTCTCTTGCGTTTTGCTGCAGGTGAAGGTGGAGAACAAAACGTGGAAAGTTGATGTAAGTTTTGGTTGGTTGGGCTTCTTGGGTAACCATTTGATTTTTTTCTTTTTTAAGCATATTTTTGCTCACAATTTTTTACCATAATTTTCATCTTTCTTAAGTAAAATAGTTTAATTCTTAGCTATATTAAAAGAAAAAAGTTCTAGAAAATTGACTTGGTTTTTGAAAATATTGGTAGAGTAGATAACTGAGCAAGAAATTTGGAGGTGGAAGGAGTGTATAGGCTTAATTTTCATACCAAAAACCAAATGGTTACCAAATATATACTTAGGGATGCCATCTCTTTCCACATGCGTTGGAAAGCAATTGAATTCAGTTTGTGGGGAAAAAGATTTTTAATTATCAGTTTATATTATTACTACTTCAGAATGTTATAGAGTAGCATAATAATTTAACTTGTTGAAGCTGTTGTTTGGCTGTTTAACTTAAAAATTCTCATCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTTCTATGTTGGAAAGCAATTGAATTCAGATTGTAGGGAAAAAGATTTTTAATTATCAGTTTATATGATTACTACTTCAGAATGTTATAGAGTAGCATAATAATTTAACTAGTTGAAGCTGTTGTTTGGCTGTTTAACTTAAAAGTTCTCATAATCTCTCTCTCTCTCTCTCTCTGTTTCTATGCCCTTCCTTTTTGGTTTTCCTTCCCAGGCTGGAGCTAGAACTATTGATATAGAGTTGACCACCTTATCAAGTACAAACCATGTTGAGCTCACTCCCAGCGATGCAGGTTTCCAAGATAGGTATATTGTTCAAGAGATAATCAAAGAAATGGCAAAAAACAGACCAATTGACTCCAAAGGGAAAAGGGGGCATAAAGGTGTTGATTCTTCCCCATCCCCTCCAACCACATTTATAAGTTGTTCATGCTTGAGAGCTTAGTGATTCATTGTGGTTAATGCTTAAAAATGTTAATGAGCCACCACCAAACAAGTATAAAGTAGTTTTATTACTTGTTTGGCAGCTTCTTTTACCAGTATGCTTGAATACTCAATACTTTATATCTGTATAAAGATATTAAGATTTTTGTGCTTTTTATATATCAGTGTTGGTTCTAAATGACGTCGACAAACTATCAAGAGAGGCCCAACACTCTCTTAGGAGAACAATGGAGAAATATAGCTCGTACTGTAGGTTAATACTTTGCTGCAATAGTTCATCAAGAGTTACTGAAGCAATCCGTTCTCGCTGCCTAAATGTGCGGATAAATGGACCAACAGAGGAGCAGGTCAGGAGAGAAAATGTTTTCTTTTTTGCAATGTCTTATTTCTTTTTGTTCTATGAATTTGAGTAAACTAAATGATTGACTGGAAGAATGTAATTATAAAATGTCATATCGCTAACCAATGTGATAAATTTTACCCGTATTCAACTTGTTTTCTGACCAAGAACTTGGAGTCAGACAACCATTGAAAACTGATGTCATAATGATCTAATTATTCTTGAATATGTTATTCTAGCAGTCTATGGGCAACAATTTTCTGGGTGTCTAACTTAATATTTAGATGTAAGTAGGTGAAAGAATACCTTTTCAAGTACTTACCTTCTATGGGTACCAATGCTGCTGTCAGAAAACCTAACAGTTCACTGGCAATTTTTTTGGGGATAAAAAACAATAGTTCATTGCCATTTTCATTTTTCATTTTCTGCTTAAACTATTTAAAGCCTTTTCTAGTGATGCCTATATTCAGTAGCTTCCATCTCTAGTTGTCATGTAATATTTTCTACCTATTTGTATACTCAAAGGTTTCAGAATAGAAGGAAAATATACGTTAGTGGATTAAGACTTCTGATTTGCAAGTTGTGGACACTGGGAAGCCAATTTCCTGTTTCATGGCATGGTTTTACTTTTACCTGAAAACTTAGTCTTCAAAAGTATTTGTTGATAGTTTATACTTTTTATTGTAGTCATTTGGACCTAAAAGCTGTTAAAAAAGTTACGTCCTTTCACCAGATTGTCAGGGTACTTGAGTTCATTGGCAAGAAAGAAGGACTGCAACTTCCATCTGGATTTGCTTCCCGTATTGCAGAAAAATCAAATCGGAGTTTGAGGAGAGCTATACTATCATTCGAGACTTGTCGTGTTCAACAGTTAGTCTCCACTAGGCTTCTTACAGATCTAAGCTTCTCTCTCAGTTCTTATCATGAAAAATTACCTTGGAAAACAATCTTTAAGGATTGGGACTGAGCTGTTTATTTATTTTATTTTTTGGATTAGGTATCCTTTTGTCAGTACCCAGGCAATTCCACCGATGGATTGGGAGGAGTACATCACTGAGATAGCATCTGACATAATGAAGGAGCAGAGTCCCAAGAGGTACGTCTTTCATGTGGTTTTCTTTTTTTTTTTTTGTTGTATTCTGTACTATAACATACATCTCAATATCAAATATTTGTGGCTTCTCTTCATATACATCAGTTGGGTACTTCTCTAACACACCATTGGTCATTCAAACTGCTTTCGATTCTTAAAATATGCTGCCCAACTATTCTTCATGAACAAATAGTTACACAAGGATAAACAAACCTTAAACTTCTATGGATGGTACCTCGATTATGATGATCTTTGTCTGGTTGGATGAAGGTGGTACAGTTTCCTGTTCATCATTAGAACTTAGAAGTACCTGTTTGATACTTCACCTTTTTTTGGTCATCAATCTAATGAATGAAGATTCCTACTCCTTATTCAACATGTCCTCGATCTTTGTACGGAAGCAATGAGGATCCTAATCATCTTTGGTGGTCTTGTGATTATGATTCGGCAGTCCAGACTTTGTTTATTTCAGTCATTTGGCCTCAGCGTGGTTGGGCCTAGAGTTTGGCATGATCACAAGAGCCCTTGCTTCAACTCTCCTTTAGTGAAAAAAGGTGGTTTTTGTGGATAACTGGCATTTGTGCTTTGTTATGTGGTCTTTGGGGTGAGAAATGATATACATATACACACACACATATATATTGGAGGAGTGGAGCGTTCTAGGGAGGAAGTTTGGCGTTCCACACTTCCCTTTGGACTTCTTTGTGTAAGGACTTTTGAATTATCCGTTAGGTATTATCTTGTTTGATTGGAGCCATTTTCTTTAGTGTGGCGCATTTTGGGGACTTTTTTTTCTTCTTGCTATGTCTCTTGTATTTTTTTATTTTTTTTTCTTAATAAAAGTTTGGTTTTGATAGGAAAAACACATGTCCTTGACTTTTGTTTTTTCGAGCAGAGAGAAAACGAGAAAACTGTAGAATTGTGAGAAATTGCAATTGTCTAGTAGAAACATATATGGAGAGAACTATTGACTTTTCAAATTGTCATGTTCTTTTGTTATTAACTAGTTGGAGAATTATTCGAAGTCTGAAATAAATGGACTTCTTTTTTGTGATACAGACTATTCCAGGTTCGTGGGAAGGTATATGAGCTACTGGTTAATTGTATCCCACCGGAGATCATATTGAAGGTAATAATTCTTCCCCAATTTCGATTGATTTTTTCTGTTTTATTGTGAGATTCATATTATCTACTTACTCAGAGGCTGCTTTATGAGCTACTCAAGAAATTGGATGCTGAATTAAAGCATGAGGTCTGTCATTGGGCTGCATATTATGTAAGTTGAAATTTGATCTGTCAATTTGTTTACATTCCCTTTTTATTGTTCAATATCAGAACTTTTTCTGGGAATTGGAATATCAATTATTTACTTTTCAGCACGCCTCAATTTTCTACTTTGTCTAACATGCATTAAATAAATACCAAAAAGTGAAACTGGTTGTGTACTTCACTTCATTTCTAATTTTCTATCCCATAGATAATTTGTTACGTCTGGCCAAATTACCATCACAATCACGTAAGAAGAATCATCTACTCACTTAAGTTTGTATAATTTTGTGAACACTGTAGTGCGTTATACATCTACATGTATTGATTCACCAATATGATATCACAGATGAAACATGGCTGCAGAGACTTTCACCTTTGTTCAGTTTCATTTCTCATCTTTGGTTAAATCTTTTTCCAGGAACACAGGATGCGCCTTGGACAGAAAGCCATCTTCCACATTGAAGGTAAATGTATTTGGTATACAAATAAGCAGAGTAACTGTTCTTACACGAAACTATAATGCCTATGTTCTTCTTTCTTCCTCTGGCTCTATTAGTTAGCCACGACCTTTATTTCATCGTAAGAACCTTGTATCCATCAAGTAATGGATAATGTAATCCAATGGAATGGTTTGAAAATGTCCTGCTATCCATGTTCAATTGAAAAAAGATTGTTTCATGCAACTTTAGAGTAATGAGTTTTGAGAAATTGATAGTACATGTTTTTATAATCATGAATTTGACTCTTAATGCTCTGACATTTGTGAAAAGATTTCCTGTTCTCAAGTTCTTTAGGTTCTAACGTTCTAATAGACTCATCTGGAAGAAGCCAAAATTCTCTCACCCACAGTTTTGAAGTACTCTTTTGGTCTGATAATGCAGCTTTTGTGGCGAAGTTCATGAGCATATACAAGACTTTCCTCATTTCAACATTCGGCTAAGGAGAAGAAAAGTAGACCTTGAAGTTAGGCTGTCTCAGTTCATTCAAGAAATGCCCTTGTAAGTTCATAGATTTGGTGTGACGTTGAATCAAGTCAATCTGGTGTATTTAGCATATCTTCTTTGGTCAGTTTTGTATGGTACTCTAGTTGTTCATCCTCCTTTAGCTTTTTTCTATTAGGGAACTTTAAGCTGCACTTTGAGGGATTTGAAAACTGAATCTAACTTGGCCGATAGGAAAAATTCGAGTCATTTTGTAGCACTTTCTACTGGAGTTTCCCCTCTTAACTAAAACGAACAATAATAGAAAAGAGAGGCCATGCTCCATATTGGATAATT

mRNA sequence

ATGGTAATTTTGAAAAGTATTGGGGTATTTTATGTATTTTTTTATAGTTTGAGAGGCACAGCCTACTGCTGGGGCTCTCGCTTCCTCTTCTCATCAGTCATCAGTTCTGTTTCTTTTTCCCGCCATTTCAAGCCTCGCCTAAGCCTTTGCTCTCTCCTTCACACACACTTCTTTTTTCGCTTTGTCACGATCTTAAATCTCCAAACACCGAAGAAGATGTTGTGGGTCGACAAGTATCGTCCAAAAACCCTAGACCAGATCACAGTTCACCAAGACGTAGCACAGAATCTTAAGAAATTGGTTACAGAACAGGACTGCCCTCATTTGCTCTTCTATGGCCCCTCCGGTTCCGGAAAGAAAACCCTAGTCATGGCCCTTATCCGGCAGATGTTCGGAGCCAGTGCGGATAAGGTTACAGAACAGGACTGCCCTCATTTGCTCTTCTATGGCCCCTCCGGTTCCGGAAAGAAAACCCTAGTCATGGCCCTTATCCGGCAGATGTTCGGAGCCAGTGCGGATAAGGTGAAGGTGGAGAACAAAACGTGGAAAGTTGATGCTGGAGCTAGAACTATTGATATAGAGTTGACCACCTTATCAAGTACAAACCATGTTGAGCTCACTCCCAGCGATGCAGGTTTCCAAGATAGGTATATTGTTCAAGAGATAATCAAAGAAATGGCAAAAAACAGACCAATTGACTCCAAAGGGAAAAGGGGGCATAAAGTGTTGGTTCTAAATGACGTCGACAAACTATCAAGAGAGGCCCAACACTCTCTTAGGAGAACAATGGAGAAATATAGCTCGTACTGTAGGTTAATACTTTGCTGCAATAGTTCATCAAGAGTTACTGAAGCAATCCGTTCTCGCTGCCTAAATGTGCGGATAAATGGACCAACAGAGGAGCAGATTGTCAGGGTACTTGAGTTCATTGGCAAGAAAGAAGGACTGCAACTTCCATCTGGATTTGCTTCCCGTATTGCAGAAAAATCAAATCGGAGTTTGAGGAGAGCTATACTATCATTCGAGACTTGTCGTGTTCAACAGTATCCTTTTGTCAGTACCCAGGCAATTCCACCGATGGATTGGGAGGAGTACATCACTGAGATAGCATCTGACATAATGAAGGAGCAGAGTCCCAAGAGACTATTCCAGGTTCGTGGGAAGGTATATGAGCTACTGGTTAATTGTATCCCACCGGAGATCATATTGAAGAGGCTGCTTTATGAGCTACTCAAGAAATTGGATGCTGAATTAAAGCATGAGGTCTGTCATTGGGCTGCATATTATGAACACAGGATGCGCCTTGGACAGAAAGCCATCTTCCACATTGAAGGTAAATGTATTTGCTTTTGTGGCGAAGTTCATGAGCATATACAAGACTTTCCTCATTTCAACATTCGGCTAAGGAGAAGAAAAGTAGACCTTGAAGTTAGGCTGTCTCAGTTCATTCAAGAAATGCCCTTGTAAGTTCATAGATTTGGTGTGACGTTGAATCAAGTCAATCTGGTGTATTTAGCATATCTTCTTTGGTCAGTTTTGTATGGTACTCTAGTTGTTCATCCTCCTTTAGCTTTTTTCTATTAGGGAACTTTAAGCTGCACTTTGAGGGATTTGAAAACTGAATCTAACTTGGCCGATAGGAAAAATTCGAGTCATTTTGTAGCACTTTCTACTGGAGTTTCCCCTCTTAACTAAAACGAACAATAATAGAAAAGAGAGGCCATGCTCCATATTGGATAATT

Coding sequence (CDS)

ATGGTAATTTTGAAAAGTATTGGGGTATTTTATGTATTTTTTTATAGTTTGAGAGGCACAGCCTACTGCTGGGGCTCTCGCTTCCTCTTCTCATCAGTCATCAGTTCTGTTTCTTTTTCCCGCCATTTCAAGCCTCGCCTAAGCCTTTGCTCTCTCCTTCACACACACTTCTTTTTTCGCTTTGTCACGATCTTAAATCTCCAAACACCGAAGAAGATGTTGTGGGTCGACAAGTATCGTCCAAAAACCCTAGACCAGATCACAGTTCACCAAGACGTAGCACAGAATCTTAAGAAATTGGTTACAGAACAGGACTGCCCTCATTTGCTCTTCTATGGCCCCTCCGGTTCCGGAAAGAAAACCCTAGTCATGGCCCTTATCCGGCAGATGTTCGGAGCCAGTGCGGATAAGGTTACAGAACAGGACTGCCCTCATTTGCTCTTCTATGGCCCCTCCGGTTCCGGAAAGAAAACCCTAGTCATGGCCCTTATCCGGCAGATGTTCGGAGCCAGTGCGGATAAGGTGAAGGTGGAGAACAAAACGTGGAAAGTTGATGCTGGAGCTAGAACTATTGATATAGAGTTGACCACCTTATCAAGTACAAACCATGTTGAGCTCACTCCCAGCGATGCAGGTTTCCAAGATAGGTATATTGTTCAAGAGATAATCAAAGAAATGGCAAAAAACAGACCAATTGACTCCAAAGGGAAAAGGGGGCATAAAGTGTTGGTTCTAAATGACGTCGACAAACTATCAAGAGAGGCCCAACACTCTCTTAGGAGAACAATGGAGAAATATAGCTCGTACTGTAGGTTAATACTTTGCTGCAATAGTTCATCAAGAGTTACTGAAGCAATCCGTTCTCGCTGCCTAAATGTGCGGATAAATGGACCAACAGAGGAGCAGATTGTCAGGGTACTTGAGTTCATTGGCAAGAAAGAAGGACTGCAACTTCCATCTGGATTTGCTTCCCGTATTGCAGAAAAATCAAATCGGAGTTTGAGGAGAGCTATACTATCATTCGAGACTTGTCGTGTTCAACAGTATCCTTTTGTCAGTACCCAGGCAATTCCACCGATGGATTGGGAGGAGTACATCACTGAGATAGCATCTGACATAATGAAGGAGCAGAGTCCCAAGAGACTATTCCAGGTTCGTGGGAAGGTATATGAGCTACTGGTTAATTGTATCCCACCGGAGATCATATTGAAGAGGCTGCTTTATGAGCTACTCAAGAAATTGGATGCTGAATTAAAGCATGAGGTCTGTCATTGGGCTGCATATTATGAACACAGGATGCGCCTTGGACAGAAAGCCATCTTCCACATTGAAGGTAAATGTATTTGCTTTTGTGGCGAAGTTCATGAGCATATACAAGACTTTCCTCATTTCAACATTCGGCTAAGGAGAAGAAAAGTAGACCTTGAAGTTAGGCTGTCTCAGTTCATTCAAGAAATGCCCTTGTAA

Protein sequence

MVILKSIGVFYVFFYSLRGTAYCWGSRFLFSSVISSVSFSRHFKPRLSLCSLLHTHFFFRFVTILNLQTPKKMLWVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTIDIELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGKKEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSTQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKVYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEGKCICFCGEVHEHIQDFPHFNIRLRRRKVDLEVRLSQFIQEMPL

Homology

[Close]

BLAST of ClCG04G004690 vs. NCBI nr
Match: XP_004144654.1 (replication factor C subunit 3 [Cucumis sativus] >KGN54900.1 hypothetical protein Csa_012378 [Cucumis sativus])

HSP 1 Score: 634.4 bits (1635), Expect = 8.0e-178
Identity = 325/372 (87.37%), Postives = 329/372 (88.44%), Query Frame = 0


Query: 73  MLWVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 132
           MLWVDKYRPKTLDQITVHQDVAQNLKKL                                
Sbjct: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKL-------------------------------- 60

Query: 133 ASADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTID 192
                V EQDCPHLLFYGPSGSGKKTLVMALIRQMFG SADKVKVENKTWKVDAG RTID
Sbjct: 61  -----VNEQDCPHLLFYGPSGSGKKTLVMALIRQMFGPSADKVKVENKTWKVDAGTRTID 120

Query: 193 IELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 252
           IELTTLSS NHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS
Sbjct: 121 IELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 180

Query: 253 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGK 312
           REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQI +VLE+IGK
Sbjct: 181 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIFKVLEYIGK 240

Query: 313 KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSTQAIPPMDWEEYITEIASD 372
           KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVS QAIPPMDWEEYITEIAS+
Sbjct: 241 KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSNQAIPPMDWEEYITEIASE 300

Query: 373 IMKEQSPKRLFQVRGKVYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 432
           IMKEQSPKRLFQVRGK+YELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR
Sbjct: 301 IMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 335

Query: 433 MRLGQKAIFHIE 445
           MRLGQKAIFHIE
Sbjct: 361 MRLGQKAIFHIE 335

[Close]

BLAST of ClCG04G004690 vs. NCBI nr
Match: XP_008442036.1 (PREDICTED: replication factor C subunit 3 [Cucumis melo] >XP_008442037.1 PREDICTED: replication factor C subunit 3 [Cucumis melo] >XP_008442038.1 PREDICTED: replication factor C subunit 3 [Cucumis melo] >KAA0041829.1 replication factor C subunit 3 [Cucumis melo var. makuwa] >TYK05351.1 replication factor C subunit 3 [Cucumis melo var. makuwa])

HSP 1 Score: 634.0 bits (1634), Expect = 1.0e-177
Identity = 325/372 (87.37%), Postives = 329/372 (88.44%), Query Frame = 0


Query: 73  MLWVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 132
           MLWVDKYRPKTLDQITVHQDVAQNLKKL                                
Sbjct: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKL-------------------------------- 60

Query: 133 ASADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTID 192
                V EQDCPHLLFYGPSGSGKKTLVMALIRQMFG SA+KVKVENKTWKVDAG RTID
Sbjct: 61  -----VNEQDCPHLLFYGPSGSGKKTLVMALIRQMFGPSAEKVKVENKTWKVDAGTRTID 120

Query: 193 IELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 252
           IELTTLSS NHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS
Sbjct: 121 IELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 180

Query: 253 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGK 312
           REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIV+VLEFIGK
Sbjct: 181 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVKVLEFIGK 240

Query: 313 KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSTQAIPPMDWEEYITEIASD 372
           KEGLQLPSGFASRIAEKS+RSLRRAILSFETCRVQQYPFV  QAIPPMDWEEYITEIASD
Sbjct: 241 KEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQYPFVGNQAIPPMDWEEYITEIASD 300

Query: 373 IMKEQSPKRLFQVRGKVYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 432
           IMKEQSPKRLFQVRGK+YELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR
Sbjct: 301 IMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 335

Query: 433 MRLGQKAIFHIE 445
           MRLGQKAIFHIE
Sbjct: 361 MRLGQKAIFHIE 335

[Close]

BLAST of ClCG04G004690 vs. NCBI nr
Match: XP_022154548.1 (replication factor C subunit 3 [Momordica charantia] >XP_022154549.1 replication factor C subunit 3 [Momordica charantia])

HSP 1 Score: 632.9 bits (1631), Expect = 2.3e-177
Identity = 323/372 (86.83%), Postives = 330/372 (88.71%), Query Frame = 0


Query: 73  MLWVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 132
           MLWVDKYRPKTLDQ+TVHQDVAQNLKKL                                
Sbjct: 1   MLWVDKYRPKTLDQVTVHQDVAQNLKKL-------------------------------- 60

Query: 133 ASADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTID 192
                VTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASA+KVKVENKTWKVDAG RTID
Sbjct: 61  -----VTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASAEKVKVENKTWKVDAGTRTID 120

Query: 193 IELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 252
           IELTTLSSTNHVELTPSDAGFQDRYIVQ+IIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS
Sbjct: 121 IELTTLSSTNHVELTPSDAGFQDRYIVQDIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 180

Query: 253 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGK 312
           REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIV+VLE IGK
Sbjct: 181 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVKVLELIGK 240

Query: 313 KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSTQAIPPMDWEEYITEIASD 372
           KEGLQLP GFASRIAEKSNRSLRRAILSFETCRVQQYPF S QAIPPMDWEEYI+EIASD
Sbjct: 241 KEGLQLPPGFASRIAEKSNRSLRRAILSFETCRVQQYPFASNQAIPPMDWEEYISEIASD 300

Query: 373 IMKEQSPKRLFQVRGKVYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 432
           IMKEQSPKRLFQVRGK+YELLVNCIPPEIILKRLLYELLKKLDAEL+HEVCHWAAYYEHR
Sbjct: 301 IMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYELLKKLDAELQHEVCHWAAYYEHR 335

Query: 433 MRLGQKAIFHIE 445
           MRLGQKAIFHIE
Sbjct: 361 MRLGQKAIFHIE 335

[Close]

BLAST of ClCG04G004690 vs. NCBI nr
Match: XP_022950838.1 (replication factor C subunit 3 isoform X2 [Cucurbita moschata])

HSP 1 Score: 629.8 bits (1623), Expect = 2.0e-176
Identity = 319/372 (85.75%), Postives = 332/372 (89.25%), Query Frame = 0


Query: 73  MLWVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 132
           MLWVDKYRPKTLDQITVHQDVAQNLKKL                                
Sbjct: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKL-------------------------------- 60

Query: 133 ASADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTID 192
                VTEQDCPHLLF+GPSGSGKKTLVMALIRQMFGASA+KVKVENKTWKVDAG R ++
Sbjct: 61  -----VTEQDCPHLLFFGPSGSGKKTLVMALIRQMFGASAEKVKVENKTWKVDAGTRNVE 120

Query: 193 IELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 252
           IELTT+SSTNHVELTPSDAGFQDRYIVQEIIK+MAKNRPIDSKGKRGHKVLVLNDVDKLS
Sbjct: 121 IELTTISSTNHVELTPSDAGFQDRYIVQEIIKDMAKNRPIDSKGKRGHKVLVLNDVDKLS 180

Query: 253 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGK 312
           REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPT++QIV+VLEFIGK
Sbjct: 181 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTDDQIVKVLEFIGK 240

Query: 313 KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSTQAIPPMDWEEYITEIASD 372
           KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVS QAIPPMDWEEYI+EIASD
Sbjct: 241 KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSNQAIPPMDWEEYISEIASD 300

Query: 373 IMKEQSPKRLFQVRGKVYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 432
           IMKEQSPKRL+QVRGK+YELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR
Sbjct: 301 IMKEQSPKRLYQVRGKLYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 335

Query: 433 MRLGQKAIFHIE 445
           MRLGQK+IFHIE
Sbjct: 361 MRLGQKSIFHIE 335

[Close]

BLAST of ClCG04G004690 vs. NCBI nr
Match: KAG6603461.1 (Replication factor C subunit 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 629.8 bits (1623), Expect = 2.0e-176
Identity = 319/372 (85.75%), Postives = 332/372 (89.25%), Query Frame = 0


Query: 73  MLWVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 132
           MLWVDKYRPKTLDQITVHQDVAQNLKKL                                
Sbjct: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKL-------------------------------- 60

Query: 133 ASADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTID 192
                VTEQDCPHLLF+GPSGSGKKTLVMALIRQMFGASA+KVKVENKTWKVDAG R ++
Sbjct: 61  -----VTEQDCPHLLFFGPSGSGKKTLVMALIRQMFGASAEKVKVENKTWKVDAGTRNVE 120

Query: 193 IELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 252
           IELTT+SSTNHVELTPSDAGFQDRYIVQEIIK+MAKNRPIDSKGKRGHKVLVLNDVDKLS
Sbjct: 121 IELTTISSTNHVELTPSDAGFQDRYIVQEIIKDMAKNRPIDSKGKRGHKVLVLNDVDKLS 180

Query: 253 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGK 312
           REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPT++QIV+VLEFIGK
Sbjct: 181 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTDDQIVKVLEFIGK 240

Query: 313 KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSTQAIPPMDWEEYITEIASD 372
           KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVS QAIPPMDWEEYI+EIASD
Sbjct: 241 KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSNQAIPPMDWEEYISEIASD 300

Query: 373 IMKEQSPKRLFQVRGKVYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 432
           IMKEQSPKRL+QVRGK+YELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR
Sbjct: 301 IMKEQSPKRLYQVRGKLYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 335

Query: 433 MRLGQKAIFHIE 445
           MRLGQK+IFHIE
Sbjct: 361 MRLGQKSIFHIE 335

[Close]

BLAST of ClCG04G004690 vs. ExPASy Swiss-Prot
Match: Q8VXX4 (Replication factor C subunit 3 OS=Arabidopsis thaliana OX=3702 GN=RFC3 PE=2 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 2.2e-162
Identity = 284/372 (76.34%), Postives = 318/372 (85.48%), Query Frame = 0


Query: 73  MLWVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 132
           MLWVDKYRPK+LD++ VH+D+AQ LKKL                                
Sbjct: 1   MLWVDKYRPKSLDKVIVHEDIAQKLKKL-------------------------------- 60

Query: 133 ASADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTID 192
                V+EQDCPHLLFYGPSGSGKKTL+MAL++Q++GASA+KVKVEN+ WKVDAG+RTID
Sbjct: 61  -----VSEQDCPHLLFYGPSGSGKKTLIMALLKQIYGASAEKVKVENRAWKVDAGSRTID 120

Query: 193 IELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 252
           +ELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPID+KGK+G+KVLVLN+VDKLS
Sbjct: 121 LELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDTKGKKGYKVLVLNEVDKLS 180

Query: 253 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGK 312
           REAQHSLRRTMEKYSS CRLILCCNSSS+VTEAI+SRCLNVRIN P++E+IV+VLEF+ K
Sbjct: 181 REAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSRCLNVRINAPSQEEIVKVLEFVAK 240

Query: 313 KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSTQAIPPMDWEEYITEIASD 372
           KE LQLP GFA+RIAEKSNRSLRRAILS ETCRVQ YPF   Q I PMDWEEY+ EIA+D
Sbjct: 241 KESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQNYPFTGNQVISPMDWEEYVAEIATD 300

Query: 373 IMKEQSPKRLFQVRGKVYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 432
           +MKEQSPK+LFQVRGKVYELLVNCIPPE+ILKRLL+ELLKKLD+ELK EVCHWAAYYEHR
Sbjct: 301 MMKEQSPKKLFQVRGKVYELLVNCIPPEVILKRLLHELLKKLDSELKLEVCHWAAYYEHR 335

Query: 433 MRLGQKAIFHIE 445
           MRLGQKAIFHIE
Sbjct: 361 MRLGQKAIFHIE 335

[Close]

BLAST of ClCG04G004690 vs. ExPASy Swiss-Prot
Match: Q852K3 (Replication factor C subunit 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC5 PE=2 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 3.4e-155
Identity = 271/372 (72.85%), Postives = 307/372 (82.53%), Query Frame = 0


Query: 73  MLWVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 132
           MLWVDKYRPKTLD++TVH  VAQNLKKL                                
Sbjct: 1   MLWVDKYRPKTLDKVTVHDQVAQNLKKL-------------------------------- 60

Query: 133 ASADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTID 192
                V EQDCPHLLFYGPSGSGKKTLVMALI+QMFGA ADKVK+ENKTWK+D G+R I+
Sbjct: 61  -----VAEQDCPHLLFYGPSGSGKKTLVMALIKQMFGAGADKVKMENKTWKIDTGSRNIE 120

Query: 193 IELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 252
           IEL  LSS +HVE+ PSDAGFQDRY+VQE+IKEMAKNRPID+KGKR  KVLVLN+VDKLS
Sbjct: 121 IELAMLSSAHHVEMNPSDAGFQDRYVVQEVIKEMAKNRPIDAKGKRAFKVLVLNEVDKLS 180

Query: 253 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGK 312
           REAQHSLRRTMEKYS+ CRLILCCNSSS+VTEA+RSRCLNVR+N P+E+QIV+VLEFIGK
Sbjct: 181 REAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNVRVNAPSEDQIVQVLEFIGK 240

Query: 313 KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSTQAIPPMDWEEYITEIASD 372
           KE LQLP GFA+RIA +SNR+LRRAIL FETC+VQQYPF S Q  PP+DWE+Y++EIA+D
Sbjct: 241 KENLQLPFGFAARIAAQSNRNLRRAILFFETCKVQQYPFTSNQVAPPLDWEQYVSEIAAD 300

Query: 373 IMKEQSPKRLFQVRGKVYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 432
           IMKEQSPKRLF VR K YELLVNCIPPE ILK+LL ELLKKLD++LKHE+CHWAA+YEH+
Sbjct: 301 IMKEQSPKRLFAVRQKFYELLVNCIPPESILKKLLAELLKKLDSDLKHEICHWAAHYEHK 335

Query: 433 MRLGQKAIFHIE 445
           MRLG KAIFH+E
Sbjct: 361 MRLGSKAIFHLE 335

[Close]

BLAST of ClCG04G004690 vs. ExPASy Swiss-Prot
Match: P40938 (Replication factor C subunit 3 OS=Homo sapiens OX=9606 GN=RFC3 PE=1 SV=2)

HSP 1 Score: 349.0 bits (894), Expect = 8.8e-95
Identity = 179/387 (46.25%), Postives = 254/387 (65.63%), Query Frame = 0


Query: 74  LWVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGA 133
           LWVDKYRP +L ++  H++ A  L+ LV    C                           
Sbjct: 3   LWVDKYRPCSLGRLDYHKEQAAQLRNLV---QC--------------------------- 62

Query: 134 SADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTIDI 193
                   D PHLL YGPSG+GKKT +M ++R+++G   +K+++E++T    +  +   I
Sbjct: 63  -------GDFPHLLVYGPSGAGKKTRIMCILRELYGVGVEKLRIEHQTITTPSKKK---I 122

Query: 194 ELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLSR 253
           E++T++S  H+E+ PSDAG  DR ++QE++K +A+++ +++  +R  KV++L +VDKL++
Sbjct: 123 EISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLETNSQRDFKVVLLTEVDKLTK 182

Query: 254 EAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGKK 313
           +AQH+LRRTMEKY S CRLILCCNS+S+V   IRSRCL VR+  P+ E I  VL  + KK
Sbjct: 183 DAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIEDICHVLSTVCKK 242

Query: 314 EGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSTQAIPPMDWEEYITEIASDI 373
           EGL LPS  A R+AEKS R+LR+A+L  E CRVQQYPF + Q IP  DWE Y+ E A+ I
Sbjct: 243 EGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDWEVYLRETANAI 302

Query: 374 MKEQSPKRLFQVRGKVYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHRM 433
           + +Q+P+RL +VRG++YELL +CIPPEII+K LL ELL   D +LK EV   AAYYEHR+
Sbjct: 303 VSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELLHNCDGQLKGEVAQMAAYYEHRL 349

Query: 434 RLGQKAIFHIEGKCICFCGEVHEHIQD 461
           +LG KAI+H+E     F     + ++D
Sbjct: 363 QLGSKAIYHLEAFVAKFMALYKKFMED 349

[Close]

BLAST of ClCG04G004690 vs. ExPASy Swiss-Prot
Match: Q2TBV1 (Replication factor C subunit 3 OS=Bos taurus OX=9913 GN=RFC3 PE=2 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 2.6e-94
Identity = 178/387 (45.99%), Postives = 253/387 (65.37%), Query Frame = 0


Query: 74  LWVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGA 133
           LWVDKYRP +L Q+  H++ A  L+ LV    C                           
Sbjct: 3   LWVDKYRPCSLGQLDYHKEQAAQLRNLV---QC--------------------------- 62

Query: 134 SADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTIDI 193
                   D PHLL YGPSG+GKKT +M ++R+++G   +K+++E++T    +  +   I
Sbjct: 63  -------GDFPHLLVYGPSGAGKKTRIMCILRELYGVGVEKLRIEHQTITTPSKKK---I 122

Query: 194 ELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLSR 253
           E++T++S  H+E+ PSDAG  DR ++QE++K +A+++ +++  ++  KV++L +VDKL++
Sbjct: 123 EISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLETSSQKDFKVVLLTEVDKLTK 182

Query: 254 EAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGKK 313
           +AQH+LRRTMEKY S CRLILCCNS+S+V   IRSRCL VR+  P+ E I  VL  + KK
Sbjct: 183 DAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIEDICHVLSTVCKK 242

Query: 314 EGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSTQAIPPMDWEEYITEIASDI 373
           EGL LP   A R+AEKS R+LR+A+L  E CRVQQYPF + Q IP  DWE Y+ E A+ I
Sbjct: 243 EGLNLPPQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDWEVYLRETANAI 302

Query: 374 MKEQSPKRLFQVRGKVYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHRM 433
           + +Q+P+RL +VRG++YELL +CIPPEII+K LL ELL   D +LK EV   AAYYEHR+
Sbjct: 303 VSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELLHNCDGQLKGEVAQMAAYYEHRL 349

Query: 434 RLGQKAIFHIEGKCICFCGEVHEHIQD 461
           +LG KAI+H+E     F     + ++D
Sbjct: 363 QLGSKAIYHLEAFVAKFMALYKKFMED 349

[Close]

BLAST of ClCG04G004690 vs. ExPASy Swiss-Prot
Match: Q8R323 (Replication factor C subunit 3 OS=Mus musculus OX=10090 GN=Rfc3 PE=1 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 3.4e-94
Identity = 178/387 (45.99%), Postives = 253/387 (65.37%), Query Frame = 0


Query: 74  LWVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGA 133
           LWVDKYRP +L ++  H++ A  L+ LV    C                           
Sbjct: 3   LWVDKYRPSSLARLDYHKEQAAQLRNLV---QC--------------------------- 62

Query: 134 SADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTIDI 193
                   D PHLL YGPSG+GKKT +M ++R+++G   +K+++E++T    +  +   I
Sbjct: 63  -------GDFPHLLVYGPSGAGKKTRIMCILRELYGIGVEKLRIEHQTITTPSKKK---I 122

Query: 194 ELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLSR 253
           E++T++S  H+E+ PSDAG  DR ++QE++K +A+++ +++  +R  KV++L +VDKL++
Sbjct: 123 EISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLETSSQRDFKVVLLTEVDKLTK 182

Query: 254 EAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGKK 313
           +AQH+LRRTMEKY S CRLILCCNS+S+V   IRSRCL VR+  P+ E I  VL  + +K
Sbjct: 183 DAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIEDICSVLSTVCRK 242

Query: 314 EGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSTQAIPPMDWEEYITEIASDI 373
           EGL LPS  A R+AEKS R+LR+A+L  E CRVQQYPF   Q IP  DWE Y+ E A+ I
Sbjct: 243 EGLALPSTLARRLAEKSCRNLRKALLMCEACRVQQYPFTEDQEIPETDWEVYLRETANAI 302

Query: 374 MKEQSPKRLFQVRGKVYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHRM 433
           + +Q+P+RL +VRG++YELL +CIPPEII+K LL ELL   D +LK EV   AAYYEHR+
Sbjct: 303 VSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELLHNCDGQLKGEVAQMAAYYEHRL 349

Query: 434 RLGQKAIFHIEGKCICFCGEVHEHIQD 461
           +LG KAI+H+E     F     + ++D
Sbjct: 363 QLGSKAIYHLEAFVAKFMALYKKFMED 349

[Close]

BLAST of ClCG04G004690 vs. ExPASy TrEMBL
Match: A0A0A0KYY3 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G579870 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 3.9e-178
Identity = 325/372 (87.37%), Postives = 329/372 (88.44%), Query Frame = 0


Query: 73  MLWVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 132
           MLWVDKYRPKTLDQITVHQDVAQNLKKL                                
Sbjct: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKL-------------------------------- 60

Query: 133 ASADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTID 192
                V EQDCPHLLFYGPSGSGKKTLVMALIRQMFG SADKVKVENKTWKVDAG RTID
Sbjct: 61  -----VNEQDCPHLLFYGPSGSGKKTLVMALIRQMFGPSADKVKVENKTWKVDAGTRTID 120

Query: 193 IELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 252
           IELTTLSS NHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS
Sbjct: 121 IELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 180

Query: 253 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGK 312
           REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQI +VLE+IGK
Sbjct: 181 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIFKVLEYIGK 240

Query: 313 KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSTQAIPPMDWEEYITEIASD 372
           KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVS QAIPPMDWEEYITEIAS+
Sbjct: 241 KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSNQAIPPMDWEEYITEIASE 300

Query: 373 IMKEQSPKRLFQVRGKVYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 432
           IMKEQSPKRLFQVRGK+YELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR
Sbjct: 301 IMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 335

Query: 433 MRLGQKAIFHIE 445
           MRLGQKAIFHIE
Sbjct: 361 MRLGQKAIFHIE 335

[Close]

BLAST of ClCG04G004690 vs. ExPASy TrEMBL
Match: A0A1S3B4A5 (replication factor C subunit 3 OS=Cucumis melo OX=3656 GN=LOC103486020 PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 5.1e-178
Identity = 325/372 (87.37%), Postives = 329/372 (88.44%), Query Frame = 0


Query: 73  MLWVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 132
           MLWVDKYRPKTLDQITVHQDVAQNLKKL                                
Sbjct: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKL-------------------------------- 60

Query: 133 ASADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTID 192
                V EQDCPHLLFYGPSGSGKKTLVMALIRQMFG SA+KVKVENKTWKVDAG RTID
Sbjct: 61  -----VNEQDCPHLLFYGPSGSGKKTLVMALIRQMFGPSAEKVKVENKTWKVDAGTRTID 120

Query: 193 IELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 252
           IELTTLSS NHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS
Sbjct: 121 IELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 180

Query: 253 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGK 312
           REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIV+VLEFIGK
Sbjct: 181 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVKVLEFIGK 240

Query: 313 KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSTQAIPPMDWEEYITEIASD 372
           KEGLQLPSGFASRIAEKS+RSLRRAILSFETCRVQQYPFV  QAIPPMDWEEYITEIASD
Sbjct: 241 KEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQYPFVGNQAIPPMDWEEYITEIASD 300

Query: 373 IMKEQSPKRLFQVRGKVYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 432
           IMKEQSPKRLFQVRGK+YELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR
Sbjct: 301 IMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 335

Query: 433 MRLGQKAIFHIE 445
           MRLGQKAIFHIE
Sbjct: 361 MRLGQKAIFHIE 335

[Close]

BLAST of ClCG04G004690 vs. ExPASy TrEMBL
Match: A0A5D3C0B6 (Replication factor C subunit 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G00180 PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 5.1e-178
Identity = 325/372 (87.37%), Postives = 329/372 (88.44%), Query Frame = 0


Query: 73  MLWVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 132
           MLWVDKYRPKTLDQITVHQDVAQNLKKL                                
Sbjct: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKL-------------------------------- 60

Query: 133 ASADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTID 192
                V EQDCPHLLFYGPSGSGKKTLVMALIRQMFG SA+KVKVENKTWKVDAG RTID
Sbjct: 61  -----VNEQDCPHLLFYGPSGSGKKTLVMALIRQMFGPSAEKVKVENKTWKVDAGTRTID 120

Query: 193 IELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 252
           IELTTLSS NHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS
Sbjct: 121 IELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 180

Query: 253 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGK 312
           REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIV+VLEFIGK
Sbjct: 181 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVKVLEFIGK 240

Query: 313 KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSTQAIPPMDWEEYITEIASD 372
           KEGLQLPSGFASRIAEKS+RSLRRAILSFETCRVQQYPFV  QAIPPMDWEEYITEIASD
Sbjct: 241 KEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQYPFVGNQAIPPMDWEEYITEIASD 300

Query: 373 IMKEQSPKRLFQVRGKVYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 432
           IMKEQSPKRLFQVRGK+YELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR
Sbjct: 301 IMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 335

Query: 433 MRLGQKAIFHIE 445
           MRLGQKAIFHIE
Sbjct: 361 MRLGQKAIFHIE 335

[Close]

BLAST of ClCG04G004690 vs. ExPASy TrEMBL
Match: A0A6J1DMG0 (replication factor C subunit 3 OS=Momordica charantia OX=3673 GN=LOC111021793 PE=4 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 1.1e-177
Identity = 323/372 (86.83%), Postives = 330/372 (88.71%), Query Frame = 0


Query: 73  MLWVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 132
           MLWVDKYRPKTLDQ+TVHQDVAQNLKKL                                
Sbjct: 1   MLWVDKYRPKTLDQVTVHQDVAQNLKKL-------------------------------- 60

Query: 133 ASADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTID 192
                VTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASA+KVKVENKTWKVDAG RTID
Sbjct: 61  -----VTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASAEKVKVENKTWKVDAGTRTID 120

Query: 193 IELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 252
           IELTTLSSTNHVELTPSDAGFQDRYIVQ+IIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS
Sbjct: 121 IELTTLSSTNHVELTPSDAGFQDRYIVQDIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 180

Query: 253 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGK 312
           REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIV+VLE IGK
Sbjct: 181 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVKVLELIGK 240

Query: 313 KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSTQAIPPMDWEEYITEIASD 372
           KEGLQLP GFASRIAEKSNRSLRRAILSFETCRVQQYPF S QAIPPMDWEEYI+EIASD
Sbjct: 241 KEGLQLPPGFASRIAEKSNRSLRRAILSFETCRVQQYPFASNQAIPPMDWEEYISEIASD 300

Query: 373 IMKEQSPKRLFQVRGKVYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 432
           IMKEQSPKRLFQVRGK+YELLVNCIPPEIILKRLLYELLKKLDAEL+HEVCHWAAYYEHR
Sbjct: 301 IMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYELLKKLDAELQHEVCHWAAYYEHR 335

Query: 433 MRLGQKAIFHIE 445
           MRLGQKAIFHIE
Sbjct: 361 MRLGQKAIFHIE 335

[Close]

BLAST of ClCG04G004690 vs. ExPASy TrEMBL
Match: A0A6J1GG01 (replication factor C subunit 3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453820 PE=4 SV=1)

HSP 1 Score: 629.8 bits (1623), Expect = 9.6e-177
Identity = 319/372 (85.75%), Postives = 332/372 (89.25%), Query Frame = 0


Query: 73  MLWVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 132
           MLWVDKYRPKTLDQITVHQDVAQNLKKL                                
Sbjct: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKL-------------------------------- 60

Query: 133 ASADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTID 192
                VTEQDCPHLLF+GPSGSGKKTLVMALIRQMFGASA+KVKVENKTWKVDAG R ++
Sbjct: 61  -----VTEQDCPHLLFFGPSGSGKKTLVMALIRQMFGASAEKVKVENKTWKVDAGTRNVE 120

Query: 193 IELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 252
           IELTT+SSTNHVELTPSDAGFQDRYIVQEIIK+MAKNRPIDSKGKRGHKVLVLNDVDKLS
Sbjct: 121 IELTTISSTNHVELTPSDAGFQDRYIVQEIIKDMAKNRPIDSKGKRGHKVLVLNDVDKLS 180

Query: 253 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGK 312
           REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPT++QIV+VLEFIGK
Sbjct: 181 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTDDQIVKVLEFIGK 240

Query: 313 KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSTQAIPPMDWEEYITEIASD 372
           KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVS QAIPPMDWEEYI+EIASD
Sbjct: 241 KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSNQAIPPMDWEEYISEIASD 300

Query: 373 IMKEQSPKRLFQVRGKVYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 432
           IMKEQSPKRL+QVRGK+YELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR
Sbjct: 301 IMKEQSPKRLYQVRGKLYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 335

Query: 433 MRLGQKAIFHIE 445
           MRLGQK+IFHIE
Sbjct: 361 MRLGQKSIFHIE 335

[Close]

BLAST of ClCG04G004690 vs. TAIR 10
Match: AT5G27740.1 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 573.5 bits (1477), Expect = 1.6e-163
Identity = 284/372 (76.34%), Postives = 318/372 (85.48%), Query Frame = 0


Query: 73  MLWVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 132
           MLWVDKYRPK+LD++ VH+D+AQ LKKL                                
Sbjct: 1   MLWVDKYRPKSLDKVIVHEDIAQKLKKL-------------------------------- 60

Query: 133 ASADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTID 192
                V+EQDCPHLLFYGPSGSGKKTL+MAL++Q++GASA+KVKVEN+ WKVDAG+RTID
Sbjct: 61  -----VSEQDCPHLLFYGPSGSGKKTLIMALLKQIYGASAEKVKVENRAWKVDAGSRTID 120

Query: 193 IELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLS 252
           +ELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPID+KGK+G+KVLVLN+VDKLS
Sbjct: 121 LELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDTKGKKGYKVLVLNEVDKLS 180

Query: 253 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGK 312
           REAQHSLRRTMEKYSS CRLILCCNSSS+VTEAI+SRCLNVRIN P++E+IV+VLEF+ K
Sbjct: 181 REAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSRCLNVRINAPSQEEIVKVLEFVAK 240

Query: 313 KEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQYPFVSTQAIPPMDWEEYITEIASD 372
           KE LQLP GFA+RIAEKSNRSLRRAILS ETCRVQ YPF   Q I PMDWEEY+ EIA+D
Sbjct: 241 KESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQNYPFTGNQVISPMDWEEYVAEIATD 300

Query: 373 IMKEQSPKRLFQVRGKVYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHR 432
           +MKEQSPK+LFQVRGKVYELLVNCIPPE+ILKRLL+ELLKKLD+ELK EVCHWAAYYEHR
Sbjct: 301 MMKEQSPKKLFQVRGKVYELLVNCIPPEVILKRLLHELLKKLDSELKLEVCHWAAYYEHR 335

Query: 433 MRLGQKAIFHIE 445
           MRLGQKAIFHIE
Sbjct: 361 MRLGQKAIFHIE 335

[Close]

BLAST of ClCG04G004690 vs. TAIR 10
Match: AT1G21690.1 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 102.4 bits (254), Expect = 1.0e-21
Identity = 79/264 (29.92%), Postives = 117/264 (44.32%), Query Frame = 0


Query: 75  WVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGAS 134
           WV+KYRPK +  +   ++V + L   +   DCPH+LFYGP G+GK T  +A+  Q+FG  
Sbjct: 11  WVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFG-- 70

Query: 135 ADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTIDIE 194
                    P L          K+ V+ L      AS D+     +T   D  A  +   
Sbjct: 71  ---------PELY---------KSRVLEL-----NASDDRGINVVRTKIKDFAAVAV--- 130

Query: 195 LTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLSRE 254
                 +NH       +G+                 P  S      K+++L++ D ++ +
Sbjct: 131 -----GSNH-----RQSGY-----------------PCPS-----FKIIILDEADSMTED 190

Query: 255 AQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGKKE 314
           AQ++LRRTME YS   R    CN  SR+ E + SRC   R    +EE +   +  I  +E
Sbjct: 191 AQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEE 214

Query: 315 GLQLPSGFASRIAEKSNRSLRRAI 339
           GL L     S ++  S   LRRAI
Sbjct: 251 GLSLDGEALSTLSSISQGDLRRAI 214

[Close]

BLAST of ClCG04G004690 vs. TAIR 10
Match: AT1G21690.3 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 102.4 bits (254), Expect = 1.0e-21
Identity = 79/264 (29.92%), Postives = 117/264 (44.32%), Query Frame = 0


Query: 75  WVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGAS 134
           WV+KYRPK +  +   ++V + L   +   DCPH+LFYGP G+GK T  +A+  Q+FG  
Sbjct: 11  WVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFG-- 70

Query: 135 ADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTIDIE 194
                    P L          K+ V+ L      AS D+     +T   D  A  +   
Sbjct: 71  ---------PELY---------KSRVLEL-----NASDDRGINVVRTKIKDFAAVAV--- 130

Query: 195 LTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLSRE 254
                 +NH       +G+                 P  S      K+++L++ D ++ +
Sbjct: 131 -----GSNH-----RQSGY-----------------PCPS-----FKIIILDEADSMTED 190

Query: 255 AQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGKKE 314
           AQ++LRRTME YS   R    CN  SR+ E + SRC   R    +EE +   +  I  +E
Sbjct: 191 AQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEE 214

Query: 315 GLQLPSGFASRIAEKSNRSLRRAI 339
           GL L     S ++  S   LRRAI
Sbjct: 251 GLSLDGEALSTLSSISQGDLRRAI 214

[Close]

BLAST of ClCG04G004690 vs. TAIR 10
Match: AT1G21690.4 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 99.0 bits (245), Expect = 1.1e-20
Identity = 74/271 (27.31%), Postives = 111/271 (40.96%), Query Frame = 0


Query: 75  WVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGAS 134
           WV+KYRPK +  +   ++V + L   +   DCPH+LFYGP G+GK T  +A+  Q+FG  
Sbjct: 11  WVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFGV- 70

Query: 135 ADKVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTIDIE 194
                                                                       
Sbjct: 71  ------------------------------------------------------------ 130

Query: 195 LTTLSSTNHVELTPSDAGFQDR--YIVQEIIKEMAKNRPIDSKGKRGH-----KVLVLND 254
                    +EL  SD    DR   +V+  IK+ A      +  + G+     K+++L++
Sbjct: 131 ---------LELNASD----DRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDE 190

Query: 255 VDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVL 314
            D ++ +AQ++LRRTME YS   R    CN  SR+ E + SRC   R    +EE +   +
Sbjct: 191 ADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRI 207

Query: 315 EFIGKKEGLQLPSGFASRIAEKSNRSLRRAI 339
             I  +EGL L     S ++  S   LRRAI
Sbjct: 251 LHICNEEGLSLDGEALSTLSSISQGDLRRAI 207

[Close]

BLAST of ClCG04G004690 vs. TAIR 10
Match: AT1G21690.2 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 95.9 bits (237), Expect = 9.6e-20
Identity = 67/206 (32.52%), Postives = 99/206 (48.06%), Query Frame = 0


Query: 140 EQDCPHLLFYGPSGSGKKTLVMALIRQMFGASADKVKVENKTWKVDAGARTIDIELTTLS 199
           E+ CPH+LFYGP G+GK T  +A+  Q+FG    K +V                      
Sbjct: 27  EEVCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRV---------------------- 86

Query: 200 STNHVELTPSDAGFQDR--YIVQEIIKEMAKNRPIDSKGKRGH-----KVLVLNDVDKLS 259
               +EL  SD    DR   +V+  IK+ A      +  + G+     K+++L++ D ++
Sbjct: 87  ----LELNASD----DRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMT 146

Query: 260 REAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVRVLEFIGK 319
            +AQ++LRRTME YS   R    CN  SR+ E + SRC   R    +EE +   +  I  
Sbjct: 147 EDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICN 202

Query: 320 KEGLQLPSGFASRIAEKSNRSLRRAI 339
           +EGL L     S ++  S   LRRAI
Sbjct: 207 EEGLSLDGEALSTLSSISQGDLRRAI 202

The following BLAST results are available for this feature:

BLAST of ClCG04G004690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144654.1	8.0e-178	87.37	replication factor C subunit 3 [Cucumis sativus] >KGN54900.1 hypothetical protei...	[more]
XP_008442036.1	1.0e-177	87.37	PREDICTED: replication factor C subunit 3 [Cucumis melo] >XP_008442037.1 PREDICT...	[more]
XP_022154548.1	2.3e-177	86.83	replication factor C subunit 3 [Momordica charantia] >XP_022154549.1 replication...	[more]
XP_022950838.1	2.0e-176	85.75	replication factor C subunit 3 isoform X2 [Cucurbita moschata]	[more]
KAG6603461.1	2.0e-176	85.75	Replication factor C subunit 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of ClCG04G004690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VXX4	2.2e-162	76.34	Replication factor C subunit 3 OS=Arabidopsis thaliana OX=3702 GN=RFC3 PE=2 SV=1	[more]
Q852K3	3.4e-155	72.85	Replication factor C subunit 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC5 ...	[more]
P40938	8.8e-95	46.25	Replication factor C subunit 3 OS=Homo sapiens OX=9606 GN=RFC3 PE=1 SV=2	[more]
Q2TBV1	2.6e-94	45.99	Replication factor C subunit 3 OS=Bos taurus OX=9913 GN=RFC3 PE=2 SV=1	[more]
Q8R323	3.4e-94	45.99	Replication factor C subunit 3 OS=Mus musculus OX=10090 GN=Rfc3 PE=1 SV=1	[more]

BLAST of ClCG04G004690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYY3	3.9e-178	87.37	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G579870 PE=4 SV...	[more]
A0A1S3B4A5	5.1e-178	87.37	replication factor C subunit 3 OS=Cucumis melo OX=3656 GN=LOC103486020 PE=4 SV=1	[more]
A0A5D3C0B6	5.1e-178	87.37	Replication factor C subunit 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1DMG0	1.1e-177	86.83	replication factor C subunit 3 OS=Momordica charantia OX=3673 GN=LOC111021793 PE...	[more]
A0A6J1GG01	9.6e-177	85.75	replication factor C subunit 3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of ClCG04G004690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27740.1	1.6e-163	76.34	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.1	1.0e-21	29.92	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.3	1.0e-21	29.92	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.4	1.1e-20	27.31	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.2	9.6e-20	32.52	ATPase family associated with various cellular activities (AAA)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 142..301 e-value: 1.9E-6 score: 37.4
None	No IPR available	PFAM	PF13177	DNA_pol3_delta2	coord: 146..296 e-value: 2.5E-12 score: 47.1
None	No IPR available	GENE3D	1.10.8.60		coord: 299..359 e-value: 2.1E-13 score: 51.6
None	No IPR available	GENE3D	1.20.272.10		coord: 361..451 e-value: 9.5E-33 score: 114.3
None	No IPR available	PFAM	PF03215	Rad17	coord: 72..128 e-value: 9.0E-7 score: 29.0
None	No IPR available	PANTHER	PTHR11669:SF1	REPLICATION FACTOR C SUBUNIT 3	coord: 138..447
None	No IPR available	PANTHER	PTHR11669	REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT	coord: 74..134
None	No IPR available	PANTHER	PTHR11669:SF1	REPLICATION FACTOR C SUBUNIT 3	coord: 74..134
None	No IPR available	PANTHER	PTHR11669	REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT	coord: 138..447
None	No IPR available	CDD	cd00009	AAA	coord: 144..290 e-value: 4.90172E-9 score: 53.3039
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 141..298 e-value: 1.0E-41 score: 145.0 coord: 72..140 e-value: 1.1E-19 score: 73.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 141..346
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 73..133
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal	SUPERFAMILY	48019	post-AAA+ oligomerization domain-like	coord: 360..446

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG04G004690.1	ClCG04G004690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005663	DNA replication factor C complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003689	DNA clamp loader activity