ClCG03G001520 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG03G001520
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	RING-H2 finger protein ATL52-like
Location	CG_Chr03: 1505150 .. 1505669 (+)
RNA-Seq Expression	ClCG03G001520
Synteny	ClCG03G001520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTTTCCGATCATCTTCCTACCGGCAACCTTCAACGTTATTGCCATCCCCGCCACCTCCGCCGTTGTCGGAGTTTATGAGTTCCCATATTTCCCACCAGAAGATGGGATTCCTGTTGGTAGGCGTCATTATTCTCGTCGTATTTTTATTCATCTTCCTTTTTCATTACTACCAATACCAACTTAGGCTGTACCAAACAAGAACCCTAGACATCGAGCAACGACTCCATGAAAATCATGCAGCACGACTCTTTGCTCGGCTTCAAGCCGAAATTATACGGCAACAGCAGGCAGCGCAACCAAACGCAGCGGAGCATGAAGAAACCTCCTCGGCTACCATGACGGTCGCTTACAAAGACGTGATCGAGACGTCGGACAAAGCCGATTGCTGTGCCATTTGCATTGAAGGGTTTGAGGAGGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGCCCATTGTTTTCATAAGGATTGTATAGACCAATGGCTGAGGATTGAGAGACGTTGCCCATTGTGCCGC

mRNA sequence

ATGCCTTTTCCGATCATCTTCCTACCGGCAACCTTCAACGTTATTGCCATCCCCGCCACCTCCGCCGTTGTCGGAGTTTATGAGTTCCCATATTTCCCACCAGAAGATGGGATTCCTGTTGCACGACTCTTTGCTCGGCTTCAAGCCGAAATTATACGGCAACAGCAGGCAGCGCAACCAAACGCAGCGGAGCATGAAGAAACCTCCTCGGCTACCATGACGGTCGCTTACAAAGACGTGATCGAGACGTCGGACAAAGCCGATTGCTGTGCCATTTGCATTGAAGGGTTTGAGGAGGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGCCCATTGTTTTCATAAGGATTGTATAGACCAATGGCTGAGGATTGAGAGACGTTGCCCATTGTGCCGC

Coding sequence (CDS)

ATGCCTTTTCCGATCATCTTCCTACCGGCAACCTTCAACGTTATTGCCATCCCCGCCACCTCCGCCGTTGTCGGAGTTTATGAGTTCCCATATTTCCCACCAGAAGATGGGATTCCTGTTGCACGACTCTTTGCTCGGCTTCAAGCCGAAATTATACGGCAACAGCAGGCAGCGCAACCAAACGCAGCGGAGCATGAAGAAACCTCCTCGGCTACCATGACGGTCGCTTACAAAGACGTGATCGAGACGTCGGACAAAGCCGATTGCTGTGCCATTTGCATTGAAGGGTTTGAGGAGGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGCCCATTGTTTTCATAAGGATTGTATAGACCAATGGCTGAGGATTGAGAGACGTTGCCCATTGTGCCGC

Protein sequence

MPFPIIFLPATFNVIAIPATSAVVGVYEFPYFPPEDGIPVARLFARLQAEIIRQQQAAQPNAAEHEETSSATMTVAYKDVIETSDKADCCAICIEGFEEEEICGVVESCAHCFHKDCIDQWLRIERRCPLCR

Homology

[Close]

BLAST of ClCG03G001520 vs. NCBI nr
Match: KAA0067736.1 (RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa])

HSP 1 Score: 118.6 bits (296), Expect = 4.0e-23
Identity = 62/94 (65.96%), Postives = 69/94 (73.40%), Query Frame = 0


Query: 42  RLFARLQAEIIRQQQAA--QPNAAEHEETSSATMTVAYK-DVIETSDKADCCAICIEGFE 101
           +L A+ QAEIIRQ+Q      +  E EETSSA MTVAYK    E      CCAICIE FE
Sbjct: 46  QLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFE 105

Query: 102 EEEICGVVESCAHCFHKDCIDQWLRIERRCPLCR 133
           +EEICGVVESC HCFH+DC+DQWLRIE RCPLCR
Sbjct: 106 DEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR 139

[Close]

BLAST of ClCG03G001520 vs. NCBI nr
Match: XP_022970384.1 (RING-H2 finger protein ATL64-like [Cucurbita maxima])

HSP 1 Score: 118.2 bits (295), Expect = 5.2e-23
Identity = 61/98 (62.24%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 42  RLFARLQAEIIRQQQA-----AQPNAAEHEETSSATMTVAYKDVIET--SDKADCCAICI 101
           RLFAR +AE++RQQQ+      +PN AE EE +S    VAY+D+  T  +D  DCCAICI
Sbjct: 50  RLFARFRAEVMRQQQSIAVPPPRPNTAE-EEAASIVTKVAYRDIKPTKEADSDDCCAICI 109

Query: 102 EGFEEEEICGVVESCAHCFHKDCIDQWLRIERRCPLCR 133
           EGFEEEEICGVV+ C HCFHK CID+WL I  RCPLCR
Sbjct: 110 EGFEEEEICGVVDGCDHCFHKVCIDKWLGIVSRCPLCR 146

[Close]

BLAST of ClCG03G001520 vs. NCBI nr
Match: KAG6583431.1 (RING-H2 finger protein ATL5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 118.2 bits (295), Expect = 5.2e-23
Identity = 61/98 (62.24%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 42  RLFARLQAEIIRQQQA-----AQPNAAEHEETSSATMTVAYKDV--IETSDKADCCAICI 101
           RLFAR +AE +RQQQ+      + N AE EE +S    VAYKD+   E +D  DCCAICI
Sbjct: 54  RLFARFRAEFMRQQQSIVAPPPRSNTAE-EEAASIVTKVAYKDIKTTEEADSDDCCAICI 113

Query: 102 EGFEEEEICGVVESCAHCFHKDCIDQWLRIERRCPLCR 133
           EGF+EEEICGV++ C HCFHK CIDQWL IE RCPLCR
Sbjct: 114 EGFQEEEICGVLDRCGHCFHKVCIDQWLGIESRCPLCR 150

[Close]

BLAST of ClCG03G001520 vs. NCBI nr
Match: XP_023520574.1 (RING-H2 finger protein ATL64-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 117.5 bits (293), Expect = 8.9e-23
Identity = 59/98 (60.20%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 42  RLFARLQAEIIRQQQA-----AQPNAAEHEETSSATMTVAYKDV--IETSDKADCCAICI 101
           RLFAR +AE++R+Q +      +PN AE EE +S    VAYKD+   E +D  DCCAICI
Sbjct: 54  RLFARFRAEVMRRQSSIATTPPRPNTAE-EEAASIVTKVAYKDIKTTEEADSDDCCAICI 113

Query: 102 EGFEEEEICGVVESCAHCFHKDCIDQWLRIERRCPLCR 133
           EGFEE+EICGV++ C HCFHK CIDQWL I+ RCPLCR
Sbjct: 114 EGFEEDEICGVLDRCGHCFHKICIDQWLGIKSRCPLCR 150

[Close]

BLAST of ClCG03G001520 vs. NCBI nr
Match: KAG7019192.1 (E3 ubiquitin-protein ligase ATL42, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 117.5 bits (293), Expect = 8.9e-23
Identity = 60/98 (61.22%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 42  RLFARLQAEIIRQQQA-----AQPNAAEHEETSSATMTVAYKDV--IETSDKADCCAICI 101
           RLFAR +AE +RQQQ+      + N AE EE +S    VAYKD+   E +D  DCCAICI
Sbjct: 208 RLFARFRAEFMRQQQSIVAPPPRSNTAE-EEAASIVTKVAYKDIKTTEEADSDDCCAICI 267

Query: 102 EGFEEEEICGVVESCAHCFHKDCIDQWLRIERRCPLCR 133
           EGF+EEE+CGV++ C HCFHK CIDQWL IE RCPLCR
Sbjct: 268 EGFQEEELCGVLDRCGHCFHKVCIDQWLGIESRCPLCR 304

[Close]

BLAST of ClCG03G001520 vs. ExPASy Swiss-Prot
Match: Q9SRM0 (RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-09
Identity = 27/66 (40.91%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 67  ETSSATMTVAYKDVIETSDKADCCAICIEGFEEEEICGVVESCAHCFHKDCIDQWLRIER 126
           E  S  + +  ++  E  ++ +CC IC+ GFEE E   V+  C+HC+H +C+D+WL+ E 
Sbjct: 85  EIRSLPVVLCRRERAEEEEEKECC-ICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTES 144

Query: 127 RCPLCR 133
            CPLCR
Sbjct: 145 SCPLCR 149

[Close]

BLAST of ClCG03G001520 vs. ExPASy Swiss-Prot
Match: P87237 (Uncharacterized RING finger protein C4G3.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC4G3.12c PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.4e-08
Identity = 31/76 (40.79%), Postives = 41/76 (53.95%), Query Frame = 0


Query: 58  AQPNAAEHEETSSATMTVAYKDVIETSDKADCCAICIEGFEEEEICGVVESCAHCFHKDC 117
           A+   A HE+   +    AY D    S  AD C IC+E +   +IC  +++C H FH+ C
Sbjct: 735 AKKPVASHEDVKRSGGLFAYFDDASLS-SADSCLICLETYTNGDICRKLQACKHFFHQAC 794

Query: 118 IDQWLRI-ERRCPLCR 133
           IDQWL      CPLCR
Sbjct: 795 IDQWLTTGNNSCPLCR 809

[Close]

BLAST of ClCG03G001520 vs. ExPASy Swiss-Prot
Match: Q9FL42 (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-07
Identity = 21/43 (48.84%), Postives = 27/43 (62.79%), Query Frame = 0


Query: 90  CAICIEGFEEEEICGVVESCAHCFHKDCIDQWLRIERRCPLCR 133
           C+IC+  +E  E    +  C HCFH DC+D+WLR    CPLCR
Sbjct: 94  CSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCR 136

[Close]

BLAST of ClCG03G001520 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-07
Identity = 21/51 (41.18%), Postives = 33/51 (64.71%), Query Frame = 0


Query: 82  ETSDKADCCAICIEGFEEEEICGVVESCAHCFHKDCIDQWLRIERRCPLCR 133
           E   ++  C++C+  F++EE   ++ +C+H FH DCID WL+    CPLCR
Sbjct: 130 EEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCR 180

[Close]

BLAST of ClCG03G001520 vs. ExPASy Swiss-Prot
Match: Q84W40 (RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 3.2e-07
Identity = 20/43 (46.51%), Postives = 27/43 (62.79%), Query Frame = 0


Query: 90  CAICIEGFEEEEICGVVESCAHCFHKDCIDQWLRIERRCPLCR 133
           C++C+  FE++E   ++  C H FH  CID WLR    CPLCR
Sbjct: 144 CSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCR 186

[Close]

BLAST of ClCG03G001520 vs. ExPASy TrEMBL
Match: A0A5A7VMH1 (RING-H2 finger protein ATL52-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00560 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.9e-23
Identity = 62/94 (65.96%), Postives = 69/94 (73.40%), Query Frame = 0


Query: 42  RLFARLQAEIIRQQQAA--QPNAAEHEETSSATMTVAYK-DVIETSDKADCCAICIEGFE 101
           +L A+ QAEIIRQ+Q      +  E EETSSA MTVAYK    E      CCAICIE FE
Sbjct: 46  QLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFE 105

Query: 102 EEEICGVVESCAHCFHKDCIDQWLRIERRCPLCR 133
           +EEICGVVESC HCFH+DC+DQWLRIE RCPLCR
Sbjct: 106 DEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR 139

[Close]

BLAST of ClCG03G001520 vs. ExPASy TrEMBL
Match: A0A6J1I5C3 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111469386 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 2.5e-23
Identity = 61/98 (62.24%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 42  RLFARLQAEIIRQQQA-----AQPNAAEHEETSSATMTVAYKDVIET--SDKADCCAICI 101
           RLFAR +AE++RQQQ+      +PN AE EE +S    VAY+D+  T  +D  DCCAICI
Sbjct: 50  RLFARFRAEVMRQQQSIAVPPPRPNTAE-EEAASIVTKVAYRDIKPTKEADSDDCCAICI 109

Query: 102 EGFEEEEICGVVESCAHCFHKDCIDQWLRIERRCPLCR 133
           EGFEEEEICGVV+ C HCFHK CID+WL I  RCPLCR
Sbjct: 110 EGFEEEEICGVVDGCDHCFHKVCIDKWLGIVSRCPLCR 146

[Close]

BLAST of ClCG03G001520 vs. ExPASy TrEMBL
Match: A0A5D3BE50 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002270 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 9.6e-23
Identity = 61/94 (64.89%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 42  RLFARLQAEIIRQQQAA--QPNAAEHEETSSATMTVAYK-DVIETSDKADCCAICIEGFE 101
           +L A+ QAEIIRQ+Q      +  E EETSSA M VAYK    E      CCAICIE FE
Sbjct: 46  QLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEFE 105

Query: 102 EEEICGVVESCAHCFHKDCIDQWLRIERRCPLCR 133
           +EEICGVVESC HCFH+DC+DQWLRIE RCPLCR
Sbjct: 106 DEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR 139

[Close]

BLAST of ClCG03G001520 vs. ExPASy TrEMBL
Match: A0A1S4E1K2 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC107991538 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 9.6e-23
Identity = 61/94 (64.89%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 42  RLFARLQAEIIRQQQAA--QPNAAEHEETSSATMTVAYK-DVIETSDKADCCAICIEGFE 101
           +L A+ QAEIIRQ+Q      +  E EETSSA M VAYK    E      CCAICIE FE
Sbjct: 2   QLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEFE 61

Query: 102 EEEICGVVESCAHCFHKDCIDQWLRIERRCPLCR 133
           +EEICGVVESC HCFH+DC+DQWLRIE RCPLCR
Sbjct: 62  DEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR 95

[Close]

BLAST of ClCG03G001520 vs. ExPASy TrEMBL
Match: A0A6J1HJU0 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464742 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.1e-21
Identity = 62/98 (63.27%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 42  RLFARLQAEIIRQQQ--AAQP---NAAEHEETSSATMTVAYKDV--IETSDKADCCAICI 101
           RLFAR +AE ++QQQ  AA P   N AE EE +S    VAY+D+   E +D  D CAICI
Sbjct: 50  RLFARFRAEFMQQQQSIAAPPPRSNTAE-EEAASIVTKVAYRDIKTTEEADVDDYCAICI 109

Query: 102 EGFEEEEICGVVESCAHCFHKDCIDQWLRIERRCPLCR 133
           EGFEEEEICGV++ C HCFHK CIDQWLRI  RCPLCR
Sbjct: 110 EGFEEEEICGVLDRCGHCFHKVCIDQWLRIGSRCPLCR 146

[Close]

BLAST of ClCG03G001520 vs. TAIR 10
Match: AT3G11110.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 8.3e-11
Identity = 27/66 (40.91%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 67  ETSSATMTVAYKDVIETSDKADCCAICIEGFEEEEICGVVESCAHCFHKDCIDQWLRIER 126
           E  S  + +  ++  E  ++ +CC IC+ GFEE E   V+  C+HC+H +C+D+WL+ E 
Sbjct: 85  EIRSLPVVLCRRERAEEEEEKECC-ICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTES 144

Query: 127 RCPLCR 133
            CPLCR
Sbjct: 145 SCPLCR 149

[Close]

BLAST of ClCG03G001520 vs. TAIR 10
Match: AT5G53110.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 9.2e-10
Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 0


Query: 90  CAICIEGFEEEEICGVVESCAHCFHKDCIDQWLRIERRCPLCR 133
           CAIC+  +E +E    +  C HCFH DCID+WL++   CP+CR
Sbjct: 330 CAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGTCPVCR 372

[Close]

BLAST of ClCG03G001520 vs. TAIR 10
Match: AT5G07040.1 (RING/U-box superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 7.8e-09
Identity = 21/43 (48.84%), Postives = 27/43 (62.79%), Query Frame = 0


Query: 90  CAICIEGFEEEEICGVVESCAHCFHKDCIDQWLRIERRCPLCR 133
           C+IC+  +E  E    +  C HCFH DC+D+WLR    CPLCR
Sbjct: 94  CSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCR 136

[Close]

BLAST of ClCG03G001520 vs. TAIR 10
Match: AT4G33565.1 (RING/U-box superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.0e-08
Identity = 25/53 (47.17%), Postives = 32/53 (60.38%), Query Frame = 0


Query: 80  VIETSDKADCCAICIEGFEEEEICGVVESCAHCFHKDCIDQWLRIERRCPLCR 133
           V+E +D    C++C+  FEEEE   ++  C H FH  CID WLR    CPLCR
Sbjct: 211 VVEGTD----CSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCR 259

[Close]

BLAST of ClCG03G001520 vs. TAIR 10
Match: AT3G43430.1 (RING/U-box superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 1.7e-08
Identity = 31/89 (34.83%), Postives = 48/89 (53.93%), Query Frame = 0


Query: 55  QQAAQPNAAEHEETSSATMTVAYKDVIETSDKA--DCCAICIEGFEEEEICGVVESCAHC 114
           Q ++ P+ +      S  ++ A++D +E S  A  D CA+C+   E+E+    + +C H 
Sbjct: 47  QSSSSPSISSQTIKESLAVS-AFRDAVERSPAAINDMCAVCLGDLEDEDEIRELRNCTHV 106

Query: 115 FHKDCIDQWLRIE---------RRCPLCR 133
           FH+DCID+WL  E         R CPLCR
Sbjct: 107 FHRDCIDRWLDYECCGGDDDNHRTCPLCR 134

The following BLAST results are available for this feature:

BLAST of ClCG03G001520 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067736.1	4.0e-23	65.96	RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]	[more]
XP_022970384.1	5.2e-23	62.24	RING-H2 finger protein ATL64-like [Cucurbita maxima]	[more]
KAG6583431.1	5.2e-23	62.24	RING-H2 finger protein ATL5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023520574.1	8.9e-23	60.20	RING-H2 finger protein ATL64-like [Cucurbita pepo subsp. pepo]	[more]
KAG7019192.1	8.9e-23	61.22	E3 ubiquitin-protein ligase ATL42, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of ClCG03G001520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRM0	1.2e-09	40.91	RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1	[more]
P87237	8.4e-08	40.79	Uncharacterized RING finger protein C4G3.12c OS=Schizosaccharomyces pombe (strai...	[more]
Q9FL42	1.1e-07	48.84	Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 P...	[more]
Q9LSW9	2.4e-07	41.18	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
Q84W40	3.2e-07	46.51	RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2	[more]

BLAST of ClCG03G001520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VMH1	1.9e-23	65.96	RING-H2 finger protein ATL52-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A6J1I5C3	2.5e-23	62.24	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111469386 P...	[more]
A0A5D3BE50	9.6e-23	64.89	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S4E1K2	9.6e-23	64.89	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC107991538 PE=3 ...	[more]
A0A6J1HJU0	1.1e-21	63.27	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464742...	[more]

BLAST of ClCG03G001520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11110.1	8.3e-11	40.91	RING/U-box superfamily protein	[more]
AT5G53110.1	9.2e-10	48.84	RING/U-box superfamily protein	[more]
AT5G07040.1	7.8e-09	48.84	RING/U-box superfamily protein	[more]
AT4G33565.1	1.0e-08	47.17	RING/U-box superfamily protein	[more]
AT3G43430.1	1.7e-08	34.83	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 90..131 e-value: 9.0E-4 score: 28.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 89..132 e-value: 6.1E-11 score: 42.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 90..132 score: 12.813844
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 49..132 e-value: 9.0E-17 score: 62.5
None	No IPR available	PANTHER	PTHR14155:SF550	RING-H2 FINGER PROTEIN ATL40	coord: 52..132
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 52..132
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 74..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G001520.1	ClCG03G001520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane