Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGCTGGAAAGCAACAAGATTATCAACATAAATTGTGGGCTTCCACTTCCACCGCATATCGTTCAGGTAATCTTCTCCAGACTTTCTATCTCCACTTTGCCCACCTGCAGGATCGTCTGTAAAACTTGGAATCGTCTGATTTTAGATTACGCCTGCTCTTCTAAATTCTCTCGCATCATCTCTATTTTTTATTTCGACCGCAATCACATTCCTTTTGGATTATCTAGCAATCCCAAGATCCATTGTTTCAATATTGATACGTTGAGTTCTGTTGCCTCATTTGAGTTCGACGCTGATTTTTCGGCTATCCACATTTTCAATCATTGTAAGGGCCTGCTCTTTATTGACAAAGAAGATAAAAATGGATGTTGTCGACTTGGCATATTAAATCCAATGACTAATGAGTTGTTCGAACTTCCTAGACCAGAATTAGAAAATATTCATAGGTTCTGATTTGGTTTCAGCCCTAAGTCGAAGCAGTACAAATTGTTTAAAGTTGATACTCCAGCCTTATTCAACATTTCATTTCAAGCTTAAATGATCCGTATTCCCTAAAGGATCTTGGAGATTTATCTTTTTTCCTTGGCATTCAAGTCTTGCATAACAAGTCAGTAATGCATCTATCTCCAGCAAGATATATATCAGATTTACTAGCTCGAGCTGGCATGACTGACTGCAAGCCTCTATTCATTCCCCTATGGTCTTTGGTGTGCATTTGTCCATTCATGATGGAGAACCTCTGGTAGATCCCACACAATATCAAAGCTTGGTTGGTGCTTTGCAGTATTACACCTTTACTTGCCCTGATATCAACTTTTCTGTGGACAAACTTTACCAATTTATGCACGCTCCTACATACACCCATCTTCAAGCTGCCAAGCGTCCTCTTCGCTATCTAAAAGGCACTATGAACCATGGGATTGTGTTGTCTTCTTCTTCTGTAGCTCTCACCTGCTTTACTGATGCAGATTGGGCCCGTTGCTCAGATGACAGACGAAGCACAAGTGGATTATGTGTGTTTCTTGGCTCTAGTTTAGTCTCTTGGGGCTCTTCCAAACAGAGGGTAGTGTCTCGTTCAAGTGCAGAGTCTGAATATCGGGAAATGTCGAATTCTGCTGCTGTATTATTATGGATTCAATCTCTTTTGTCTGAAATTAGTTTCTGCATCTACCTCCTCTGTTGCTGTTATATGACAATGTGAGTGCTACCTATTTGGCTGATAATCCAGTTCTTCACAACCATACCAAACATATTGAAATAGACCAACATTTCACGCGTGAAAAGTAGCTCGAGGACAGCTTTATGTCAGGTTTGTTCCGTCTGATGATCAGCTTGCTGACATCATGACTAAATCTCCCGTCTCCTCGGTTTAACAGCCTTAAGATCAAGCTCACTGTTGCTTCAACCCCTGTTTCGCGTGCGGGGGATGATAAGATGGTCTTTCCCTATCAGTTATTCTTTATTTTATTTTCCGTTGATTTAGAATTCTTTCTGTTTTGGGCTGTATTTTTCCATTTTACTTCTGTTATATCCTTCTCCTATCAGTGCTTGACATGTCACGTTACTTTTACTCATTAAATAGTTGCTGAATGAACCGGGCTCATTGAGCAATTTCTCCATTTTCGCATCTCTTCATTCTTCATCTTCTTTTATAATAAAAGTTACCCATGTCCTAAAAGACTCCGGTTCCTCCATTAACCCAACACACTCCAGCTCCTTCATAACGAAGGTTTTCAGGTTTGGTAGGAGTGGAACCAACCAATAGAGCCATTTTGACTTTCTGTCTTTTGACATATACTATTTTGGTGTTTACTTAGATGGAGTCATCTATTAGATTGGCATAGGAAAAAAAAGATGAGGTTATCATATATTCTTTTGATGTCGAAACTGAAAAAATTGAATTGATTGCGGTCTTGGAGGTTCCTCACTCTAGGAGTGCATACATTAAGACATTTAATGACAAGGTGGTTTATGCAACTGTTTTCATGGGACATCACCTCCTAAGCTTGAAAGTGTGGAGAATGCAAAGAAAGATTCATAGATGTTATTGATGACATACCAGGATTAGGGGAGTCAAATCTTTCACCTAATTAAAGCATTTGAAGATGAGGAGATATTGTTTTTGGCTCATAATACAGACTTATTTTGCTTGGATAAAATTGGGAGGAAGACCCAGATAAAAAAATTGAATTCAGATGAGACACTACTTAGTGGGATTGGTCTTATAGAATTCCCGAATTTTGGATCACTCGCAGACATTTTAGCAGGAAGTGACTGA
mRNA sequence
ATGGAGAAGCTGGAAAGCAACAAGATTATCAACATAAATTGTGGGCTTCCACTTCCACCGCATATCGTTCAGGTAATCTTCTCCAGACTTTCTATCTCCACTTTGCCCACCTGCAGGATCGTCTGTAAAACTTGGAATCGTCTGATTTTAGATTACGCCTGCTCTTCTAAATTCTCTCGCATCATCTCTATTTTTTATTTCGACCGCAATCACATTCCTTTTGGATTATCTAGCAATCCCAAGATCCATTGTTTCAATATTGATACGTTGAGTTCTGTTGCCTCATTTGAGTTCGACGCTGATTTTTCGGCTATCCACATTTTCAATCATTGTAAGGGCCTGCTCTTTATTGACAAAGAAGATAAAAATGGATGTTGTCGACTTGGCATATTAAATCCAATGACTAATGAGTTGTTCGAACTTCCTAGACCAGAATTAGAAAATATTCATAGGTTTTCAGGTTTGGTAGGAGTGGAACCAACCAATAGAGCCATTTTGACTTTCTGTCTTTTGACATATACTATTTTGGAAAAAAAAGATGAGGTTATCATATATTCTTTTGATGTCGAAACTGAAAAAATTGAATTGATTGCGGTCTTGGAGGTTCCTCACTCTAGGAGTGCATACATTAAGACATTTAATGACAAGGTGGTTTATGCAACTGTTTTCATGGGACATCACCTCCTAAGCTTGAAAGGGAGTCAAATCTTTCACCTAATTAAAGCATTTGAAGATGAGGAGATATTGTTTTTGGCTCATAATACAGACTTATTTTGCTTGGATAAAATTGGGAGGAAGACCCAGATAAAAAAATTGAATTCAGATGAGACACTACTTAGTGGGATTGGTCTTATAGAATTCCCGAATTTTGGATCACTCGCAGACATTTTAGCAGGAAGTGACTGA
Coding sequence (CDS)
ATGGAGAAGCTGGAAAGCAACAAGATTATCAACATAAATTGTGGGCTTCCACTTCCACCGCATATCGTTCAGGTAATCTTCTCCAGACTTTCTATCTCCACTTTGCCCACCTGCAGGATCGTCTGTAAAACTTGGAATCGTCTGATTTTAGATTACGCCTGCTCTTCTAAATTCTCTCGCATCATCTCTATTTTTTATTTCGACCGCAATCACATTCCTTTTGGATTATCTAGCAATCCCAAGATCCATTGTTTCAATATTGATACGTTGAGTTCTGTTGCCTCATTTGAGTTCGACGCTGATTTTTCGGCTATCCACATTTTCAATCATTGTAAGGGCCTGCTCTTTATTGACAAAGAAGATAAAAATGGATGTTGTCGACTTGGCATATTAAATCCAATGACTAATGAGTTGTTCGAACTTCCTAGACCAGAATTAGAAAATATTCATAGGTTTTCAGGTTTGGTAGGAGTGGAACCAACCAATAGAGCCATTTTGACTTTCTGTCTTTTGACATATACTATTTTGGAAAAAAAAGATGAGGTTATCATATATTCTTTTGATGTCGAAACTGAAAAAATTGAATTGATTGCGGTCTTGGAGGTTCCTCACTCTAGGAGTGCATACATTAAGACATTTAATGACAAGGTGGTTTATGCAACTGTTTTCATGGGACATCACCTCCTAAGCTTGAAAGGGAGTCAAATCTTTCACCTAATTAAAGCATTTGAAGATGAGGAGATATTGTTTTTGGCTCATAATACAGACTTATTTTGCTTGGATAAAATTGGGAGGAAGACCCAGATAAAAAAATTGAATTCAGATGAGACACTACTTAGTGGGATTGGTCTTATAGAATTCCCGAATTTTGGATCACTCGCAGACATTTTAGCAGGAAGTGACTGA
Protein sequence
MEKLESNKIININCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFSRIISIFYFDRNHIPFGLSSNPKIHCFNIDTLSSVASFEFDADFSAIHIFNHCKGLLFIDKEDKNGCCRLGILNPMTNELFELPRPELENIHRFSGLVGVEPTNRAILTFCLLTYTILEKKDEVIIYSFDVETEKIELIAVLEVPHSRSAYIKTFNDKVVYATVFMGHHLLSLKGSQIFHLIKAFEDEEILFLAHNTDLFCLDKIGRKTQIKKLNSDETLLSGIGLIEFPNFGSLADILAGSD
Homology
BLAST of ClCG01G016520 vs. NCBI nr
Match:
XP_008459707.1 (PREDICTED: F-box protein At3g07870-like [Cucumis melo])
HSP 1 Score: 188.3 bits (477), Expect = 9.4e-44
Identity = 142/377 (37.67%), Postives = 191/377 (50.66%), Query Frame = 0
Query: 1 MEKLESNKIININCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFSR 60
ME LE+ K I +N L LPPHIV+ IFS+LSIS LPTCR+VCKTWN L+L+YA S+KF
Sbjct: 1 MEILETKKRIPMNINLRLPPHIVRAIFSKLSISNLPTCRVVCKTWNNLVLEYASSTKFLP 60
Query: 61 IISIFYF----DRNHIPFGLS--SNPKIHCFNIDTLSS-VASFEFDADFSAIHIFNHCKG 120
++F N+IPF + NPKIHC +ID+ +S VASF F+ D+S I I N C G
Sbjct: 61 TTTLFLSMADEISNYIPFKSTPWCNPKIHCVDIDSKTSYVASFGFEGDWSYITIVNSCNG 120
Query: 121 LLFIDKEDKNGCCRLGILNPMTNELFELPRPELE-NIHRFS----------GLVGVEPTN 180
LL+I K + C GILNPMTNE E+P+PE+E ++H L EP
Sbjct: 121 LLYICKFTFDSLCE-GILNPMTNEFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEV 180
Query: 181 RAILTFCLLTYTI-------------------------------------LEKKDEVIIY 240
L C I LEK+ E +IY
Sbjct: 181 LENLKKCHYIMEIFTFDNGYKQWRHFERLPFVVFHHGQYLNGVIYWIGKKLEKEGEAVIY 240
Query: 241 SFDVETEKIELIAVLEV-PHSRSAYIKTFNDKVVYATVFMGHHLLSLKGSQI-------- 299
+ DV+TE++E A LE+ P ++ IK F ++ VYA + + +S +I
Sbjct: 241 ALDVDTEQMECTATLEIGPSLKNGSIKIFEER-VYAIISLMDKRVSPTSYKIELWRMQKK 300
BLAST of ClCG01G016520 vs. NCBI nr
Match:
XP_004141602.1 (F-box protein At3g07870 [Cucumis sativus])
HSP 1 Score: 140.2 bits (352), Expect = 2.9e-29
Identity = 130/395 (32.91%), Postives = 182/395 (46.08%), Query Frame = 0
Query: 1 MEKLESNKIININCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFSR 60
MEKLE + NIN GL LPP++V+VI +L+IS LP CR+V +TWN LIL+YA SSKF
Sbjct: 1 MEKLECKR--NINLGLQLPPNVVEVILPKLTISDLPACRLVSRTWNHLILNYASSSKFIP 60
Query: 61 IISI-----FYFDRN-----HIPFGLSSNPKIHCFNID-TLSSVASFEFDADF--SAIHI 120
+ + ++ RN H NPK++C +I+ T + +ASF FD + I I
Sbjct: 61 NLFLAASYEIHYSRNCNCNPHCRPTFKCNPKMYCIDINRTNNLIASFVFDNNDWPYKIKI 120
Query: 121 FNHCKGLLFIDKEDKNGCCRLGILNPMTNELFEL---PRPELENIHRFSGL--------- 180
N C GLL+I K C GILNPMTNE F L P+ + E+I F G
Sbjct: 121 LNSCNGLLYIHKVGDENFCN-GILNPMTNEFFILSTQPKVKNEDISCFYGFGFNLKTKQY 180
Query: 181 -----VGVEPTNRAILT-----------------------FC-------LLTYTILEKKD 240
+ E + ++ +C ++ + +K++
Sbjct: 181 KLFKAIHDEEDSHLMMEVMRFGKNEETKEWRHLTCLPFVFYCDGVYLNGVIYWIGRQKEN 240
Query: 241 EVIIYSFDVETEKIELIAVLEVPHSRSA-----YIKTFNDKVVYATV------------- 300
+ +IYS +VETEKIE I VL+V S + YI +N +YAT+
Sbjct: 241 KSVIYSLNVETEKIESITVLKVDPSYNTSDYGYYIGKYNGN-LYATIWIHGTCCKKVQLW 300
BLAST of ClCG01G016520 vs. NCBI nr
Match:
KAA0039746.1 (F-box protein [Cucumis melo var. makuwa])
HSP 1 Score: 120.2 bits (300), Expect = 3.1e-23
Identity = 124/387 (32.04%), Postives = 162/387 (41.86%), Query Frame = 0
Query: 11 NINCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFSRIISIFYFDRN 70
++ G LPPHIV I RL IS LP R+V KTWN ILDYA + + +
Sbjct: 11 SMKLGRGLPPHIVSEILRRLVISNLPNLRVVSKTWNLFILDYAHEFSSTNANAFLLSTSD 70
Query: 71 HIPFGLSSNPKIHCFNIDTLSSV---------------ASFEFDADFSAIHIF-NHCKGL 130
P NPK++C + DT + S FD D+S I + N C GL
Sbjct: 71 TGPGNKDLNPKMYCIHFDTTKHLDLDLDFDLELEWTKPPSLSFDGDWSFIPMMDNSCNGL 130
Query: 131 LFIDKEDKNGCCRL--GILNPMTNELFELPRPELENIHRFSGLVGVEPTNRAILTF---- 190
+FI K C GI NPMTNE ++PR EL+ + F GL G PT + F
Sbjct: 131 VFIRK-----CAFFSDGIFNPMTNEFLQVPRHELDGDNYFYGL-GFSPTTKQYKMFRVNP 190
Query: 191 -------CLLTYTILE-------------------------------------KKDEVII 250
+LT+ E K++E I
Sbjct: 191 NNNSSIMYILTFRRSETNYKYNQWRQLHSLPILICCDGVYLNGFIYWMGRKQYKENEYTI 250
Query: 251 YSFDVETEKIELIAVLEV-PHSRSAY----IKTFNDKVVYATVF--------------MG 302
Y+ +VETE+IEL AVL + P S S+ +K FN VYAT + M
Sbjct: 251 YALNVETEQIELSAVLHLGPFSTSSIPGVSLKQFNGS-VYATFYIDPKTCNSVIQVWRMQ 310
BLAST of ClCG01G016520 vs. NCBI nr
Match:
TYK24751.1 (F-box protein [Cucumis melo var. makuwa])
HSP 1 Score: 119.8 bits (299), Expect = 4.1e-23
Identity = 124/389 (31.88%), Postives = 163/389 (41.90%), Query Frame = 0
Query: 11 NINCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFSRIISIFYFDRN 70
++ G LPPHIV+ I RL IS LP R+V KTWN ILDYA + + +
Sbjct: 14 SMKLGRGLPPHIVREILRRLVISNLPNLRVVSKTWNLFILDYAHEFSSTNANAFLLSTSD 73
Query: 71 HIPFGLSSNPKIHCFNIDTLSSV---------------ASFEFDADFSAIHIF-NHCKGL 130
P NPK++C + DT + S FD D+S I + N C GL
Sbjct: 74 TGPGNKDLNPKMYCIHFDTTKHLDLDLDFDLELEWTKPPSLSFDGDWSFIPMMDNSCNGL 133
Query: 131 LFIDKEDKNGCCRL----GILNPMTNELFELPRPELENIHRFSGLVGVEPTNRAILTF-- 190
+FI K C GI NPMTNE ++PR EL+ + F GL G PT + F
Sbjct: 134 VFIRK-----CAFFSRSDGIFNPMTNEFLQVPRHELDGDNYFYGL-GFSPTTKQYKMFRV 193
Query: 191 ---------CLLTYTILE-------------------------------------KKDEV 250
+LT+ E K++E
Sbjct: 194 NPNNNSSIMYILTFRRSETNYKYNQWRQLHSLPILICCDGVYLNGFIYWMGRKQYKENEY 253
Query: 251 IIYSFDVETEKIELIAVLEV-PHSRSAY----IKTFNDKVVYATVF-------------- 302
IY+ +VETE+IEL AVL + P S S+ +K FN VYAT +
Sbjct: 254 TIYALNVETEQIELSAVLHLGPFSTSSIPGVSLKQFNGS-VYATFYIDPKTCNSVIQVWR 313
BLAST of ClCG01G016520 vs. NCBI nr
Match:
XP_038879760.1 (uncharacterized protein LOC120071509 [Benincasa hispida])
HSP 1 Score: 118.2 bits (295), Expect = 1.2e-22
Identity = 98/276 (35.51%), Postives = 125/276 (45.29%), Query Frame = 0
Query: 12 INCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSK-FSRIISIFYFDRN 71
+N G L I + IF RL +S L TCR+VCKTWN LILDY+ SSK + +F D N
Sbjct: 4 VNWGRELQEDIGESIFGRLVVSNLATCRVVCKTWNSLILDYSSSSKLLTNDFILFTRDGN 63
Query: 72 HIPFGLSS--NPKIHCFNIDTL----------SSVASFEFDADFSAIHIFNHCKGLLFID 131
I G SS NPK+HCF +D L + AS FD D+S I C GLL I
Sbjct: 64 PI-CGSSSLYNPKMHCFRLDDLDVDSDMEFEVNKFASLRFDGDWSFILPIRSCNGLLLIS 123
Query: 132 KEDKNGCCRLGILNPMTNELFELPR---------------PELENIHRFSGLVGVEP--- 191
K C +GI NPMTNE F +PR P ++ F + EP
Sbjct: 124 KSTFY-CSCMGIFNPMTNEFFRVPRDNFDANKYVYGFGFIPTTKHYKLFRITIEDEPSYS 183
Query: 192 TNRAILTF--------------------------CL-------LTYTILEKKD---EVII 218
+ +LTF C + Y + +KD E +I
Sbjct: 184 SRMEVLTFGRGGINPNPKQSQNQWRHLYSIPSDICCKGAYFNGIIYWLGREKDEQNEYVI 243
BLAST of ClCG01G016520 vs. ExPASy TrEMBL
Match:
A0A1S3CB99 (F-box protein At3g07870-like OS=Cucumis melo OX=3656 GN=LOC103498749 PE=4 SV=1)
HSP 1 Score: 188.3 bits (477), Expect = 4.5e-44
Identity = 142/377 (37.67%), Postives = 191/377 (50.66%), Query Frame = 0
Query: 1 MEKLESNKIININCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFSR 60
ME LE+ K I +N L LPPHIV+ IFS+LSIS LPTCR+VCKTWN L+L+YA S+KF
Sbjct: 1 MEILETKKRIPMNINLRLPPHIVRAIFSKLSISNLPTCRVVCKTWNNLVLEYASSTKFLP 60
Query: 61 IISIFYF----DRNHIPFGLS--SNPKIHCFNIDTLSS-VASFEFDADFSAIHIFNHCKG 120
++F N+IPF + NPKIHC +ID+ +S VASF F+ D+S I I N C G
Sbjct: 61 TTTLFLSMADEISNYIPFKSTPWCNPKIHCVDIDSKTSYVASFGFEGDWSYITIVNSCNG 120
Query: 121 LLFIDKEDKNGCCRLGILNPMTNELFELPRPELE-NIHRFS----------GLVGVEPTN 180
LL+I K + C GILNPMTNE E+P+PE+E ++H L EP
Sbjct: 121 LLYICKFTFDSLCE-GILNPMTNEFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEV 180
Query: 181 RAILTFCLLTYTI-------------------------------------LEKKDEVIIY 240
L C I LEK+ E +IY
Sbjct: 181 LENLKKCHYIMEIFTFDNGYKQWRHFERLPFVVFHHGQYLNGVIYWIGKKLEKEGEAVIY 240
Query: 241 SFDVETEKIELIAVLEV-PHSRSAYIKTFNDKVVYATVFMGHHLLSLKGSQI-------- 299
+ DV+TE++E A LE+ P ++ IK F ++ VYA + + +S +I
Sbjct: 241 ALDVDTEQMECTATLEIGPSLKNGSIKIFEER-VYAIISLMDKRVSPTSYKIELWRMQKK 300
BLAST of ClCG01G016520 vs. ExPASy TrEMBL
Match:
A0A0A0KSJ2 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643290 PE=4 SV=1)
HSP 1 Score: 140.2 bits (352), Expect = 1.4e-29
Identity = 130/395 (32.91%), Postives = 182/395 (46.08%), Query Frame = 0
Query: 1 MEKLESNKIININCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFSR 60
MEKLE + NIN GL LPP++V+VI +L+IS LP CR+V +TWN LIL+YA SSKF
Sbjct: 1 MEKLECKR--NINLGLQLPPNVVEVILPKLTISDLPACRLVSRTWNHLILNYASSSKFIP 60
Query: 61 IISI-----FYFDRN-----HIPFGLSSNPKIHCFNID-TLSSVASFEFDADF--SAIHI 120
+ + ++ RN H NPK++C +I+ T + +ASF FD + I I
Sbjct: 61 NLFLAASYEIHYSRNCNCNPHCRPTFKCNPKMYCIDINRTNNLIASFVFDNNDWPYKIKI 120
Query: 121 FNHCKGLLFIDKEDKNGCCRLGILNPMTNELFEL---PRPELENIHRFSGL--------- 180
N C GLL+I K C GILNPMTNE F L P+ + E+I F G
Sbjct: 121 LNSCNGLLYIHKVGDENFCN-GILNPMTNEFFILSTQPKVKNEDISCFYGFGFNLKTKQY 180
Query: 181 -----VGVEPTNRAILT-----------------------FC-------LLTYTILEKKD 240
+ E + ++ +C ++ + +K++
Sbjct: 181 KLFKAIHDEEDSHLMMEVMRFGKNEETKEWRHLTCLPFVFYCDGVYLNGVIYWIGRQKEN 240
Query: 241 EVIIYSFDVETEKIELIAVLEVPHSRSA-----YIKTFNDKVVYATV------------- 300
+ +IYS +VETEKIE I VL+V S + YI +N +YAT+
Sbjct: 241 KSVIYSLNVETEKIESITVLKVDPSYNTSDYGYYIGKYNGN-LYATIWIHGTCCKKVQLW 300
BLAST of ClCG01G016520 vs. ExPASy TrEMBL
Match:
A0A0A0LWG1 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G257290 PE=4 SV=1)
HSP 1 Score: 120.9 bits (302), Expect = 8.9e-24
Identity = 116/403 (28.78%), Postives = 166/403 (41.19%), Query Frame = 0
Query: 1 MEKLE-SNKIININCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFS 60
+E +E S + + INCG LPP I + IFS+L IS LP+CR+V TWN L+LDYA S++
Sbjct: 8 IENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDYASSTQLQ 67
Query: 61 RIISIFYFDRNHIPFGLS-SNPKIHCFNIDT--------------LSSVASFEFDADFS- 120
+ + F + NPK+HC N+DT AS +FD D++
Sbjct: 68 FLKNAFLLSTSDRGLNYKLCNPKMHCINLDTRQLSNDFDFDLESEFIKSASLQFDGDWTY 127
Query: 121 AIHIFNHCKGLLFIDKEDKNGCCRLGILNPMTNELFELPR-------------------- 180
I + C GL+ I K C+ GI NPMTNE ++
Sbjct: 128 TIIMAGSCNGLMLISKCSDYTWCQ-GIFNPMTNEFLQVSEHGTFDDFYLYGFGFSPITKQ 187
Query: 181 -------PELENIHRFSGLV-----------GVEPTNRAI-------------------- 240
+ R S V G TN +I
Sbjct: 188 YKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPFEIVADG 247
Query: 241 -----LTFCLLTYTILEKKDEVIIYSFDVETEKIELIAVLEVPHSRSAYIKTFNDKVVYA 300
+ + L+ +K+ + +IY+ DVETE IE+ VL+VP + I FN +YA
Sbjct: 248 VYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNGYGKIHQFNG-TIYA 307
BLAST of ClCG01G016520 vs. ExPASy TrEMBL
Match:
A0A5A7TCF3 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00060 PE=4 SV=1)
HSP 1 Score: 120.2 bits (300), Expect = 1.5e-23
Identity = 124/387 (32.04%), Postives = 162/387 (41.86%), Query Frame = 0
Query: 11 NINCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFSRIISIFYFDRN 70
++ G LPPHIV I RL IS LP R+V KTWN ILDYA + + +
Sbjct: 11 SMKLGRGLPPHIVSEILRRLVISNLPNLRVVSKTWNLFILDYAHEFSSTNANAFLLSTSD 70
Query: 71 HIPFGLSSNPKIHCFNIDTLSSV---------------ASFEFDADFSAIHIF-NHCKGL 130
P NPK++C + DT + S FD D+S I + N C GL
Sbjct: 71 TGPGNKDLNPKMYCIHFDTTKHLDLDLDFDLELEWTKPPSLSFDGDWSFIPMMDNSCNGL 130
Query: 131 LFIDKEDKNGCCRL--GILNPMTNELFELPRPELENIHRFSGLVGVEPTNRAILTF---- 190
+FI K C GI NPMTNE ++PR EL+ + F GL G PT + F
Sbjct: 131 VFIRK-----CAFFSDGIFNPMTNEFLQVPRHELDGDNYFYGL-GFSPTTKQYKMFRVNP 190
Query: 191 -------CLLTYTILE-------------------------------------KKDEVII 250
+LT+ E K++E I
Sbjct: 191 NNNSSIMYILTFRRSETNYKYNQWRQLHSLPILICCDGVYLNGFIYWMGRKQYKENEYTI 250
Query: 251 YSFDVETEKIELIAVLEV-PHSRSAY----IKTFNDKVVYATVF--------------MG 302
Y+ +VETE+IEL AVL + P S S+ +K FN VYAT + M
Sbjct: 251 YALNVETEQIELSAVLHLGPFSTSSIPGVSLKQFNGS-VYATFYIDPKTCNSVIQVWRMQ 310
BLAST of ClCG01G016520 vs. ExPASy TrEMBL
Match:
A0A5D3DMB7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003140 PE=4 SV=1)
HSP 1 Score: 119.8 bits (299), Expect = 2.0e-23
Identity = 124/389 (31.88%), Postives = 163/389 (41.90%), Query Frame = 0
Query: 11 NINCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFSRIISIFYFDRN 70
++ G LPPHIV+ I RL IS LP R+V KTWN ILDYA + + +
Sbjct: 14 SMKLGRGLPPHIVREILRRLVISNLPNLRVVSKTWNLFILDYAHEFSSTNANAFLLSTSD 73
Query: 71 HIPFGLSSNPKIHCFNIDTLSSV---------------ASFEFDADFSAIHIF-NHCKGL 130
P NPK++C + DT + S FD D+S I + N C GL
Sbjct: 74 TGPGNKDLNPKMYCIHFDTTKHLDLDLDFDLELEWTKPPSLSFDGDWSFIPMMDNSCNGL 133
Query: 131 LFIDKEDKNGCCRL----GILNPMTNELFELPRPELENIHRFSGLVGVEPTNRAILTF-- 190
+FI K C GI NPMTNE ++PR EL+ + F GL G PT + F
Sbjct: 134 VFIRK-----CAFFSRSDGIFNPMTNEFLQVPRHELDGDNYFYGL-GFSPTTKQYKMFRV 193
Query: 191 ---------CLLTYTILE-------------------------------------KKDEV 250
+LT+ E K++E
Sbjct: 194 NPNNNSSIMYILTFRRSETNYKYNQWRQLHSLPILICCDGVYLNGFIYWMGRKQYKENEY 253
Query: 251 IIYSFDVETEKIELIAVLEV-PHSRSAY----IKTFNDKVVYATVF-------------- 302
IY+ +VETE+IEL AVL + P S S+ +K FN VYAT +
Sbjct: 254 TIYALNVETEQIELSAVLHLGPFSTSSIPGVSLKQFNGS-VYATFYIDPKTCNSVIQVWR 313
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3CB99 | 4.5e-44 | 37.67 | F-box protein At3g07870-like OS=Cucumis melo OX=3656 GN=LOC103498749 PE=4 SV=1 | [more] |
A0A0A0KSJ2 | 1.4e-29 | 32.91 | F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643290 PE=4 ... | [more] |
A0A0A0LWG1 | 8.9e-24 | 28.78 | F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G257290 PE=4 ... | [more] |
A0A5A7TCF3 | 1.5e-23 | 32.04 | F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00060 ... | [more] |
A0A5D3DMB7 | 2.0e-23 | 31.88 | F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003140... | [more] |
Match Name | E-value | Identity | Description | |