CaUC06G108330 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G108330
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Tubulin-specific chaperone A
Location	Ciama_Chr06: 1989512 .. 1992143 (+)
RNA-Seq Expression	CaUC06G108330
Synteny	CaUC06G108330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATATGCTAATGTTAGGACTTAATATGATGAAATGGGCAATCGGAGTCTTGATATCTATGGAATTTCATAGTGTAGGTTGAAAAATCTGAATTTTAGTCGTCACTCCGAGCTAAGTGCAGAGGTGTAGGCCAGAAAACTATGGTTGGGAGTTCTTAGACCGTGAACTAAGCCACATTGATGTTTGTCAATATGATATCTTAGTCTTTAGTTTTCTTTTGGTTATGTGATTCTAAGAGCCTCTTCAGAATAATAGGTTTTGGGTATTACTCTCCCCTAGGCTAGTAAATATGGCTTTGTACATTTTGGCAAGATGCTCATTGATCCACTGCATATCTGTCTTTGAACTGTCAAACCTTGATTTGGTTGAAATTGTTCCTTGGAGCATCTTCAGGTATTAGAAACGTAGGTATTGAAATTGAAATTTGTAATCTTCAGTGTTAAAGAAATTTTGTATCCATGAGTTTCACCAAAATTTTGTGTGTAAAGGTGTGGGATTGAACATTATTACCCCTGAGGAGTTTTCAATGTTTGAAGAAGAGCTTTCCTCCATGATACAAGAAACTTTGACAACTTAGCTCCATGTGGAAAAGTTGATGTTGAGACCATGTTCGGAGTCTGATGTTTTGATAACATCTTAGGGTTTAAGAAGAGGAAAGAATGTATTACTGATTAATTACAATTACCATGAATTCACACAGGCCCTAACAAACTTTAAGAAAATGATAACACTAATTCATAATGGAGTGGAGTCCCAATTTTCATGCTTTTGTGAGAACTGAGAAGCAAAATATTGTCTCTCTTTGCAAGTTATTAAACCATTTCCTGATTTTTGACCATGATATATGCTTCTGGTGATAGGTCAGTATGGCTACTATAAAGAACCTGAAGATTAAGACAGCAACCTGCAAACGAATTATCAAGGAGTTGCATTCTTATGAGAAGGAGGTTGAGAGAGAAGCTGCTAAAACAGCTGACATGAAAGAAAAAGGGGCTGACCCTTATGACCTTAAACAACAGGTATGTAAATGGGTTGCATTCTTAATAATCAAAAGTCTGTATGATTATTGTCTGCTTGACTGCTTGTGGATTTGTTTGTGCCATCTGTGAATATCTTAAAGAGGACTTCTTACACATTCAAAACCTTGTGATAGACAGAAATTTCCAACATCACACAATATGAACAATAGAATTTGTGAGCGTGAAGATAAGTGTTTTCACCTATAAAGAAGAATAATGGTCTCGAATTTGGAGCCTAGAGATGGTTTTCAGGGTAGGACTTTTGTAATTGTTTTTGGCCTCTTAACTTTCTCATTTTTTGATAAGAACGACAACTTTTATTGAGATAGAAATGAAAGAATACACGGGCATACTAAAAGGCCAACCCTCAAAAAAGGGACTCCAGCCATACAAAATAGAACCTACAAGATAATTACAAAAGGACTTCGAAATCGAAGCTTGGAGTAAGCATGAAATCTAACAAGGGACCAAGGAATAAACATCACTTGGATCCTTGTCCAACCCTCTAAACACATGGTTTCTACTCCTCCATAGATCTCACAAAATAGCACACACCCCAGCAAGTCAAAGAAACCAACCCTTCTTGCGAAAGGGCGGATGGAGAAGGAACTCTCCAATCACATCATAGATCTTCCTAGGCCACGCAAGCGAGAAACCAAATGGCCGTTTACTTTCTCATTGCTGTTAAACTTTATTTTCTTAAAGGTATAAAATCAAAAGGACCAACTAAAATGTTATTTCGGGTAATGGAGGTTGGATGTAATTGCCATCAGCATATGAATCTTCTTTTTCATTTGGTTTACGCAGTATATGATTTATAGTTTTAGCATTCTCATTGTAAGCAGGAAAATGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTCTGGAGTCCGCATTAGCTGATCTGAAAGGAGCACTGGTATTAATGATCATTACCTTTGCTTTTCATCCTTCCCTTTCTTGCTCTTCTGAAGAGCTTGATTCTTGAAGGTTCTCTGCATGTGCCCGGTTTTTGTAAGTAAACTAAAACAAACCTTTTTCATCTTCTTCATCTCCAGGCTGAACTGGAAGAATCAACACAAGAGAAAGGCCAGGAGTTCGACGACGCTCGAAGTACAATCACCGAGATCGAAAGTTTCCTAAAGACAACAGAGGAATAGTAGTGAGTTTGACACTGATCTTAATTGATGCATCCTTTAGAAGTTATTTAATCAAACTGTTGCTTTGCAATATTAGTTCTCAATGTTTGGCTTTTGGATGCTATGTTTATAGTTTGGAGAGAGTTTCATCTTCTGTTATTCACTACTATCATCGAGTGTAAGACTATACTCTTCTGCTGGGTGTTGTATTTTAGAATATTTTGATGGGGTTTCCCAAATTTAAAGGACTGCATTTCTAAGTATATACAACAGCAACCAAGCACATTTGCTCGTTGAGTGAGTGCTACGTAAGCAATATAGATGATTAATAAGAGGGTTTGGTAAATAAAATAAAAGTAATATTAATGATTAATCAAAAGTCAATGACCATGGTACGCCTAGTGGCATAGATTGTTGCACATGAAAAAAGTGAATAAACTTTATGGAAGAATGATCTCA

mRNA sequence

ATGCATATGCTAATGTTAGGACTTAATATGATGAAATGGGCAATCGGAGTCTTGATATCTATGGAATTTCATAGTGTCAGTATGGCTACTATAAAGAACCTGAAGATTAAGACAGCAACCTGCAAACGAATTATCAAGGAGTTGCATTCTTATGAGAAGGAGGTTGAGAGAGAAGCTGCTAAAACAGCTGACATGAAAGAAAAAGGGGCTGACCCTTATGACCTTAAACAACAGGAAAATGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTCTGGAGTCCGCATTAGCTGATCTGAAAGGAGCACTGGCTGAACTGGAAGAATCAACACAAGAGAAAGGCCAGGAGTTCGACGACGCTCGAAGTACAATCACCGAGATCGAAAGTTTCCTAAAGACAACAGAGGAATAGTATTTGGAGAGAGTTTCATCTTCTGTTATTCACTACTATCATCGAGTGTAAGACTATACTCTTCTGCTGGGTGTTGTATTTTAGAATATTTTGATGGGGTTTCCCAAATTTAAAGGACTGCATTTCTAAGTATATACAACAGCAACCAAGCACATTTGCTCGTTGAGTGAGTGCTACGTAAGCAATATAGATGATTAATAAGAGGGTTTGGTAAATAAAATAAAAGTAATATTAATGATTAATCAAAAGTCAATGACCATGGTACGCCTAGTGGCATAGATTGTTGCACATGAAAAAAGTGAATAAACTTTATGGAAGAATGATCTCA

Coding sequence (CDS)

ATGCATATGCTAATGTTAGGACTTAATATGATGAAATGGGCAATCGGAGTCTTGATATCTATGGAATTTCATAGTGTCAGTATGGCTACTATAAAGAACCTGAAGATTAAGACAGCAACCTGCAAACGAATTATCAAGGAGTTGCATTCTTATGAGAAGGAGGTTGAGAGAGAAGCTGCTAAAACAGCTGACATGAAAGAAAAAGGGGCTGACCCTTATGACCTTAAACAACAGGAAAATGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTCTGGAGTCCGCATTAGCTGATCTGAAAGGAGCACTGGCTGAACTGGAAGAATCAACACAAGAGAAAGGCCAGGAGTTCGACGACGCTCGAAGTACAATCACCGAGATCGAAAGTTTCCTAAAGACAACAGAGGAATAG

Protein sequence

MHMLMLGLNMMKWAIGVLISMEFHSVSMATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE

Homology

[Close]

BLAST of CaUC06G108330 vs. NCBI nr
Match: XP_022155762.1 (tubulin-folding cofactor A [Momordica charantia])

HSP 1 Score: 201.1 bits (510), Expect = 6.5e-48
Identity = 103/113 (91.15%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 28  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 87
           MAT++NLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 88  MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 141
           M+PDCHKRLE++LADLKGALAELEESTQEKG EFD+ARSTI+E+E+FLKTTEE
Sbjct: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEE 113

[Close]

BLAST of CaUC06G108330 vs. NCBI nr
Match: XP_038907024.1 (tubulin-folding cofactor A [Benincasa hispida])

HSP 1 Score: 200.3 bits (508), Expect = 1.1e-47
Identity = 106/113 (93.81%), Postives = 110/113 (97.35%), Query Frame = 0


Query: 28  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 87
           MAT+KNLKIKTATCKRIIKELHSYEKEVE EAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEIEAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 88  MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 141
           MVPDCHKRLESAL DLKGALAELE+STQEKG EF+DARSTITEIESFL+TTEE
Sbjct: 61  MVPDCHKRLESALVDLKGALAELEKSTQEKGPEFNDARSTITEIESFLQTTEE 113

[Close]

BLAST of CaUC06G108330 vs. NCBI nr
Match: XP_023006149.1 (tubulin-folding cofactor A [Cucurbita maxima] >XP_023006150.1 tubulin-folding cofactor A [Cucurbita maxima] >XP_023006151.1 tubulin-folding cofactor A [Cucurbita maxima] >XP_023006152.1 tubulin-folding cofactor A [Cucurbita maxima])

HSP 1 Score: 199.5 bits (506), Expect = 1.9e-47
Identity = 106/113 (93.81%), Postives = 108/113 (95.58%), Query Frame = 0


Query: 28  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 87
           MAT+KNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 88  MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 141
           MVPDCHKRLESALADLKG L ELE+STQ KG EFDDARS ITEIESFLKTTEE
Sbjct: 61  MVPDCHKRLESALADLKGTLDELEKSTQVKGPEFDDARSIITEIESFLKTTEE 113

[Close]

BLAST of CaUC06G108330 vs. NCBI nr
Match: XP_023548059.1 (tubulin-folding cofactor A [Cucurbita pepo subsp. pepo] >XP_023548060.1 tubulin-folding cofactor A [Cucurbita pepo subsp. pepo] >XP_023548061.1 tubulin-folding cofactor A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.4 bits (503), Expect = 4.2e-47
Identity = 105/113 (92.92%), Postives = 108/113 (95.58%), Query Frame = 0


Query: 28  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 87
           MAT+KNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 88  MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 141
           MVPDCHKRLESALADLKG L ELE+STQ +G EFDDARS ITEIESFLKTTEE
Sbjct: 61  MVPDCHKRLESALADLKGTLDELEKSTQVRGPEFDDARSIITEIESFLKTTEE 113

[Close]

BLAST of CaUC06G108330 vs. NCBI nr
Match: XP_022959143.1 (tubulin-folding cofactor A [Cucurbita moschata] >XP_022959144.1 tubulin-folding cofactor A [Cucurbita moschata] >XP_022959145.1 tubulin-folding cofactor A [Cucurbita moschata] >XP_022959146.1 tubulin-folding cofactor A [Cucurbita moschata])

HSP 1 Score: 196.8 bits (499), Expect = 1.2e-46
Identity = 104/113 (92.04%), Postives = 108/113 (95.58%), Query Frame = 0


Query: 28  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 87
           MAT+KNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 88  MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 141
           MVPDCHKRLE+ALADLKG L ELE+STQ KG EF+DARS ITEIESFLKTTEE
Sbjct: 61  MVPDCHKRLEAALADLKGTLDELEKSTQVKGPEFEDARSIITEIESFLKTTEE 113

[Close]

BLAST of CaUC06G108330 vs. ExPASy Swiss-Prot
Match: O04350 (Tubulin-folding cofactor A OS=Arabidopsis thaliana OX=3702 GN=TFCA PE=1 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 4.7e-41
Identity = 84/112 (75.00%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 28  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 87
           MATI+NLKIKT+TCKRI+KELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRM
Sbjct: 1   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRM 60

Query: 88  MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTE 140
           M+PDCHKRLESALADLK  LAELEE+ +++G E +DA+ T+ ++E    T +
Sbjct: 61  MIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVADVEKQFPTED 112

[Close]

BLAST of CaUC06G108330 vs. ExPASy Swiss-Prot
Match: P80585 (Tubulin-specific chaperone A OS=Gallus gallus OX=9031 GN=TBCA PE=1 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 7.0e-13
Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = 0


Query: 31  IKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVP 90
           ++ +KIKT   KR+ KE   YEKE +++  K   MK +  D Y +K+Q  +L ESRMM+P
Sbjct: 6   LRQIKIKTGVVKRLAKEKVMYEKEAKQQEEKIEKMKAEACDDYGIKKQAEILQESRMMIP 65

Query: 91  DCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIE 133
           DC +RLE A ADL   L    E   E+ +E+ +ARS +  ++
Sbjct: 66  DCQRRLEIAHADLTQLLE--NEKELEEAEEYKEARSILESVK 105

[Close]

BLAST of CaUC06G108330 vs. ExPASy Swiss-Prot
Match: O75347 (Tubulin-specific chaperone A OS=Homo sapiens OX=9606 GN=TBCA PE=1 SV=3)

HSP 1 Score: 75.1 bits (183), Expect = 7.0e-13
Identity = 39/102 (38.24%), Postives = 64/102 (62.75%), Query Frame = 0


Query: 31  IKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVP 90
           ++ +KIKT   KR++KE   YEKE +++  K   M+ +  + YD+K+Q  +L ESRMM+P
Sbjct: 6   VRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIP 65

Query: 91  DCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIE 133
           DC +RLE+A  DL+  L    E   E+ +E+ +AR  +  ++
Sbjct: 66  DCQRRLEAAYLDLQRILE--NEKDLEEAEEYKEARLVLDSVK 105

[Close]

BLAST of CaUC06G108330 vs. ExPASy Swiss-Prot
Match: Q6PEC1 (Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-12
Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 31  IKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVP 90
           ++ +KIKT   KR++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMM+P
Sbjct: 6   VRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMKAEDGENYAIKKQAEILQESRMMIP 65

Query: 91  DCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIE 133
           DC +RLE+A  DL+  L    E   E+ +E+ +AR  +  ++
Sbjct: 66  DCQRRLEAAYTDLRQILE--SEKDLEEAEEYKEARIVLDSVK 105

[Close]

BLAST of CaUC06G108330 vs. ExPASy Swiss-Prot
Match: P48428 (Tubulin-specific chaperone A OS=Mus musculus OX=10090 GN=Tbca PE=1 SV=3)

HSP 1 Score: 72.4 bits (176), Expect = 4.6e-12
Identity = 38/102 (37.25%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 31  IKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVP 90
           ++ +KIKT   +R++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMM+P
Sbjct: 6   VRQIKIKTGVVRRLVKERVMYEKEAKQQEEKIEKMKAEDGENYAIKKQAEILQESRMMIP 65

Query: 91  DCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIE 133
           DC +RLE+A  DL+  L    E   E+ +E+ +AR  +  ++
Sbjct: 66  DCQRRLEAAYTDLQQILE--SEKDLEEAEEYKEARVVLDSVK 105

[Close]

BLAST of CaUC06G108330 vs. ExPASy TrEMBL
Match: A0A6J1DQ83 (Tubulin-specific chaperone A OS=Momordica charantia OX=3673 GN=LOC111022807 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.1e-48
Identity = 103/113 (91.15%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 28  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 87
           MAT++NLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 88  MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 141
           M+PDCHKRLE++LADLKGALAELEESTQEKG EFD+ARSTI+E+E+FLKTTEE
Sbjct: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEE 113

[Close]

BLAST of CaUC06G108330 vs. ExPASy TrEMBL
Match: A0A6J1KV46 (Tubulin-specific chaperone A OS=Cucurbita maxima OX=3661 GN=LOC111498976 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 9.2e-48
Identity = 106/113 (93.81%), Postives = 108/113 (95.58%), Query Frame = 0


Query: 28  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 87
           MAT+KNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 88  MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 141
           MVPDCHKRLESALADLKG L ELE+STQ KG EFDDARS ITEIESFLKTTEE
Sbjct: 61  MVPDCHKRLESALADLKGTLDELEKSTQVKGPEFDDARSIITEIESFLKTTEE 113

[Close]

BLAST of CaUC06G108330 vs. ExPASy TrEMBL
Match: A0A6J1H416 (Tubulin-specific chaperone A OS=Cucurbita moschata OX=3662 GN=LOC111460224 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 5.9e-47
Identity = 104/113 (92.04%), Postives = 108/113 (95.58%), Query Frame = 0


Query: 28  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 87
           MAT+KNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 88  MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 141
           MVPDCHKRLE+ALADLKG L ELE+STQ KG EF+DARS ITEIESFLKTTEE
Sbjct: 61  MVPDCHKRLEAALADLKGTLDELEKSTQVKGPEFEDARSIITEIESFLKTTEE 113

[Close]

BLAST of CaUC06G108330 vs. ExPASy TrEMBL
Match: A0A5D3DLX2 (Tubulin-specific chaperone A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00640 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.9e-45
Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 0


Query: 25  SVSMATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAE 84
           ++ MAT+KNLKIKTATCKRI+KEL SYEKEVEREA+KTADMKEKGADPYDLKQQENVLAE
Sbjct: 125 ALGMATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAE 184

Query: 85  SRMMVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 141
           SRMMVPDCHKRLE ALADLK ALAELE+ST+EKG EFDDARSTI +IESFLK TEE
Sbjct: 185 SRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARSTINDIESFLKPTEE 240

[Close]

BLAST of CaUC06G108330 vs. ExPASy TrEMBL
Match: A0A0A0KER0 (Tubulin-specific chaperone A OS=Cucumis sativus OX=3659 GN=Csa_6G078610 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.9e-45
Identity = 101/116 (87.07%), Postives = 108/116 (93.10%), Query Frame = 0


Query: 25  SVSMATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAE 84
           ++ MAT+KNLKIKTATCKRI+KEL SYEKEVEREAAKTADMKEKGADPYDLKQQENVLAE
Sbjct: 126 ALGMATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAE 185

Query: 85  SRMMVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 141
           SRMMVPDCHKRLE ALADLK ALAELE+STQEKG EFDDARSTI ++ESFLK  EE
Sbjct: 186 SRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARSTINDVESFLKPIEE 241

[Close]

BLAST of CaUC06G108330 vs. TAIR 10
Match: AT2G30410.1 (tubulin folding cofactor A (KIESEL) )

HSP 1 Score: 168.7 bits (426), Expect = 3.3e-42
Identity = 84/112 (75.00%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 28  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 87
           MATI+NLKIKT+TCKRI+KELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRM
Sbjct: 1   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRM 60

Query: 88  MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTE 140
           M+PDCHKRLESALADLK  LAELEE+ +++G E +DA+ T+ ++E    T +
Sbjct: 61  MIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVADVEKQFPTED 112

[Close]

BLAST of CaUC06G108330 vs. TAIR 10
Match: AT2G30410.2 (tubulin folding cofactor A (KIESEL) )

HSP 1 Score: 168.7 bits (426), Expect = 3.3e-42
Identity = 84/112 (75.00%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 28  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 87
           MATI+NLKIKT+TCKRI+KELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRM
Sbjct: 1   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRM 60

Query: 88  MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTE 140
           M+PDCHKRLESALADLK  LAELEE+ +++G E +DA+ T+ ++E    T +
Sbjct: 61  MIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVADVEKQFPTED 112

The following BLAST results are available for this feature:

BLAST of CaUC06G108330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155762.1	6.5e-48	91.15	tubulin-folding cofactor A [Momordica charantia]	[more]
XP_038907024.1	1.1e-47	93.81	tubulin-folding cofactor A [Benincasa hispida]	[more]
XP_023006149.1	1.9e-47	93.81	tubulin-folding cofactor A [Cucurbita maxima] >XP_023006150.1 tubulin-folding co...	[more]
XP_023548059.1	4.2e-47	92.92	tubulin-folding cofactor A [Cucurbita pepo subsp. pepo] >XP_023548060.1 tubulin-...	[more]
XP_022959143.1	1.2e-46	92.04	tubulin-folding cofactor A [Cucurbita moschata] >XP_022959144.1 tubulin-folding ...	[more]

BLAST of CaUC06G108330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04350	4.7e-41	75.00	Tubulin-folding cofactor A OS=Arabidopsis thaliana OX=3702 GN=TFCA PE=1 SV=2	[more]
P80585	7.0e-13	41.18	Tubulin-specific chaperone A OS=Gallus gallus OX=9031 GN=TBCA PE=1 SV=2	[more]
O75347	7.0e-13	38.24	Tubulin-specific chaperone A OS=Homo sapiens OX=9606 GN=TBCA PE=1 SV=3	[more]
Q6PEC1	1.6e-12	38.24	Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1	[more]
P48428	4.6e-12	37.25	Tubulin-specific chaperone A OS=Mus musculus OX=10090 GN=Tbca PE=1 SV=3	[more]

BLAST of CaUC06G108330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQ83	3.1e-48	91.15	Tubulin-specific chaperone A OS=Momordica charantia OX=3673 GN=LOC111022807 PE=3...	[more]
A0A6J1KV46	9.2e-48	93.81	Tubulin-specific chaperone A OS=Cucurbita maxima OX=3661 GN=LOC111498976 PE=3 SV...	[more]
A0A6J1H416	5.9e-47	92.04	Tubulin-specific chaperone A OS=Cucurbita moschata OX=3662 GN=LOC111460224 PE=3 ...	[more]
A0A5D3DLX2	1.9e-45	87.07	Tubulin-specific chaperone A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0KER0	1.9e-45	87.07	Tubulin-specific chaperone A OS=Cucumis sativus OX=3659 GN=Csa_6G078610 PE=3 SV=...	[more]

BLAST of CaUC06G108330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30410.1	3.3e-42	75.00	tubulin folding cofactor A (KIESEL)	[more]
AT2G30410.2	3.3e-42	75.00	tubulin folding cofactor A (KIESEL)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 93..120
None	No IPR available	COILS	Coil	Coil	coord: 41..68
None	No IPR available	GENE3D	1.20.58.90		coord: 25..140 e-value: 1.3E-41 score: 143.2
None	No IPR available	PANTHER	PTHR21500:SF4	TUBULIN-SPECIFIC CHAPERONE A	coord: 28..140
IPR004226	Tubulin binding cofactor A	PFAM	PF02970	TBCA	coord: 34..114 e-value: 3.9E-27 score: 94.4
IPR004226	Tubulin binding cofactor A	PANTHER	PTHR21500	TUBULIN-SPECIFIC CHAPERONE A	coord: 28..140
IPR036126	Tubulin binding cofactor A superfamily	SUPERFAMILY	46988	Tubulin chaperone cofactor A	coord: 30..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G108330.1	CaUC06G108330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007023	post-chaperonin tubulin folding pathway
biological_process	GO:0007021	tubulin complex assembly
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005874	microtubule
molecular_function	GO:0048487	beta-tubulin binding