CaUC01G019560 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G019560
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Glutaredoxin domain-containing protein
Location	Ciama_Chr01: 32589237 .. 32592085 (-)
RNA-Seq Expression	CaUC01G019560
Synteny	CaUC01G019560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGCGAGGGAACCCGAGAAATGCAATCATCAGTTGATTCCAAGAAGAAAGGCGTGGAGGAGAAAGAAGGGAAAGAGAAAGAAAGAGAAAAGAGCGTGAAATTGCCACCGCCGCCGGAGAAGCCGTTGCCGGGGGATTGTTGCGGGAGTGGATGCGTTCGATGTGTGTGGGATGTATATTACGAAGAGCTTGAAGATTACAACAAGCTTTGCGAGAAAGGTTCGGCGCCCAATTCATGAGATTTCAATTGAGCCCCAGTTTTTAAAAACTGTATTTGAATCTGTTTCTTGTTGTAAACTCATTGAATTCAAATTGATTCTGTATCAGAATCCGTTTCTTGTAGCTTGAATTTATGCGAAATCGATATGTATCTGTATCTGTTTCTATAAGAACAATTCTTCAAATGAAATGTTATTTCCGAATAATTGAATGTTATTTTTCTTTCAAATTTATGAACCTTTTGTAATTGATTCAACGCACTGCACGCAATGACATTGATTTTTATCACTCGATCAATTATAGTTCTATAATTTCACTTTAAAAGAAAAAAGAAAAAAGAAAAAAGAAAAAAGCCGAGCCAATAATCTCGATCGAAGTGACTTAAAATATATTTTCGTAAATTTTCATTTTTTTAATTAAAATTTGTTTATATTATATTGATGATGATGAATTGGTGGGGGAAGAGCTGAGCTGTCAGTTACGTACGGGAGAAACAGAAAGATTGTGTTGATCCGTTAAAAAGGCCCAGTAGGCCTAATGGGCCTCATAATATATATTGAAGATTTAGAGGCTGACGGATTGTGTGTAATTTTGGAGGATGACGAGGGGATTTCATTTTCAGTTGACTGTGGTTGTGGCGGTGATCACCATCGCCGGCCTTTCTCCGAGAGATGGCCTTACCGGAGCTGAAGCTGCCACTTCCACTTCCGCTTTCGTTCAGAACGTCATCTACTCTAACAGGATTGCTATGTTCTCCAAATCCTACTGCCCGTATGTTCTCCTCTACTCTATTCCTTTTTTAATTACACAAACACACGCTTTATTCTTTTCGCTTCCTGTTTCCTGAAATGCATTATGTCTACACATAGTAATCAATCAATCGTTGTTTTAATGAGTTGTTGCCGCCAATGAACCCGAAATTCTAATATTAGTGATTCACGGCTTTTTCCGTGAAATGAATATGGGATATACAAATGATTCATTTCGGTTGTTCTTTTTACCAATTTTGGACTTGAATAAGAAGCTTATATTTCCCTTCGAACAAATTAGTCGGCCCCATTTCGACAGCGCCAGAAATTTTGCTTGATTGCTATTGGGTTGGATTTTTTCCCCTCTCATTCTCTCGGTGGTTTCTAGCTGACCAGTTACCAATGATACGTAGTCGGGTGTGTATTGAACTATTTTTATGTTGCTTAGTTCTTAGTCATGGTTGTTTGGGTTGACTTTGATAAAAAGTACTTTTAAGCATTTAGAAAGCCAACCCAAATAGACCCGAATTTGTTTACCATTCAGACATTGTATTGTTTAAATTCCTGCTTTGTGCAATGATGCTGTAGCAATCTGGTTGGCAGGGCATTTTGATTGCTTGCTTTTGTAAATTGTAACGTCAAAATTGTTCACTTGTGCAATCTTTTCAATTGGATTCCTGGGATCAGTGTTACGGTTGGATTCCTTGCATTGTTTAGTCTTCCTGGTTGTACGCTATCCTGCCTTTCTTGAAGAAACGATTATGGAGCCCCATGTTAGCTAAACGTTGCAATTTAATTTTTCAAAGAACTGATTGTGCTTTGTAATGAACGAGACCCCCTATTCTTATTATGTACTGTTCCAACTTCCAACTGCAATAGTTTTATTTCCTCTCTCTCTGCTTTTGTAATTTCATCTATCAATAAAATGTGCTTTTTGTTTCTTCTAAAATGGAAAGAAGGGATCTTCCTATACAAAAACCGAAAAACTACAAAAATGTGGTCCTTTAAATGGTCTCTCTCTGTTCCCTTCTCTAGTGAATAATAATAATAATAATAATAATAATAAGAATAATTTTAATTAAGTGACTCATATTCTGTTGTTTTATTCTGCTGGAAGATATTGCTTGGGTGCCAAACGTATATTCAGTGAACTCCATGAAAAACCTTTTGTTGTGGAGCTTGATCTTCGAGGTATTTATTCTGTTTTAATTTTGTTGATCATTTGTAATATCAATAATTATTTGAAAAAGCATTTTCATGACCACATAATGATGGGTATCTACGTTTACATGTAGATGATGGATCTCAAATTCAGAGTGTTCTACTAGACCTGACAGGAAAGCGCACTGTTCCTCAAATTTTTGTGAATGGCAAGCACATTGGTGGCTCTGATGGTGAGCTCTCTCAGCTCCTTAATTGTTCAAAAGATTTCTACATGTCTTTTTCAGTGGAGTAAATTTCACATTTCCATCACCATTTAGTTCAGTGTGGTTTCATATTTTATACAGATCTGAAAGCCGCGGTTGCTAGTGGTCAGTTGCAGAAACTTCTGGCTTCAAATTGATTGCCTTCTTGGAACGATGAAGCACATATTTATCGAACTTAAGCTACATAACCTGTGTAGATGAATATTAAGTTTGTGAAAACTTTCGATAACATTTGTTATTTGTTTATATTCTGCAACAGAGAATCCTGTTGCAAATTTCGCCCTCTACTTTAATGAGAATCTGCTTTTTTTTTTTTTTTTTCCCTTTTTATTATTTGAAAGCCTCGGTGAAAAGGTGTTTGATTTGGGTATTGTATCACATTTCCTGTGTCTCATCAATGTAGTAGTGGCACACAAATTGAAGATGAATTTTCTTCATTAGCTGGAATTT

mRNA sequence

ATGGCTAGCGAGGGAACCCGAGAAATGCAATCATCAGTTGATTCCAAGAAGAAAGGCGTGGAGGAGAAAGAAGGGAAAGAGAAAGAAAGAGAAAAGAGCGTGAAATTGCCACCGCCGCCGGAGAAGCCGTTGCCGGGGGATTGTTGCGGGAGTGGATGCGTTCGATGTGTGTGGGATGTATATTACGAAGAGCTTGAAGATTACAACAAGCTTTGCGAGAAAGGCCCAGTAGGCCTAATGGGCCTCATAATATATATTGAAGATTTAGAGGCTGACGGATTGTGTTTGACTGTGGTTGTGGCGGTGATCACCATCGCCGGCCTTTCTCCGAGAGATGGCCTTACCGGAGCTGAAGCTGCCACTTCCACTTCCGCTTTCGTTCAGAACGTCATCTACTCTAACAGGATTGCTATGTTCTCCAAATCCTACTGCCCATATTGCTTGGGTGCCAAACGTATATTCAGTGAACTCCATGAAAAACCTTTTGTTGTGGAGCTTGATCTTCGAGATGATGGATCTCAAATTCAGAGTGTTCTACTAGACCTGACAGGAAAGCGCACTGTTCCTCAAATTTTTGTGAATGGCAAGCACATTGGTGGCTCTGATGATCTGAAAGCCGCGGTTGCTAGTGGTCAGTTGCAGAAACTTCTGGCTTCAAATTGATTGCCTTCTTGGAACGATGAAGCACATATTTATCGAACTTAAGCTACATAACCTGTGTAGATGAATATTAAGTTTGTGAAAACTTTCGATAACATTTGTTATTTGTTTATATTCTGCAACAGAGAATCCTGTTGCAAATTTCGCCCTCTACTTTAATGAGAATCTGCTTTTTTTTTTTTTTTTTCCCTTTTTATTATTTGAAAGCCTCGGTGAAAAGGTGTTTGATTTGGGTATTGTATCACATTTCCTGTGTCTCATCAATGTAGTAGTGGCACACAAATTGAAGATGAATTTTCTTCATTAGCTGGAATTT

Coding sequence (CDS)

ATGGCTAGCGAGGGAACCCGAGAAATGCAATCATCAGTTGATTCCAAGAAGAAAGGCGTGGAGGAGAAAGAAGGGAAAGAGAAAGAAAGAGAAAAGAGCGTGAAATTGCCACCGCCGCCGGAGAAGCCGTTGCCGGGGGATTGTTGCGGGAGTGGATGCGTTCGATGTGTGTGGGATGTATATTACGAAGAGCTTGAAGATTACAACAAGCTTTGCGAGAAAGGCCCAGTAGGCCTAATGGGCCTCATAATATATATTGAAGATTTAGAGGCTGACGGATTGTGTTTGACTGTGGTTGTGGCGGTGATCACCATCGCCGGCCTTTCTCCGAGAGATGGCCTTACCGGAGCTGAAGCTGCCACTTCCACTTCCGCTTTCGTTCAGAACGTCATCTACTCTAACAGGATTGCTATGTTCTCCAAATCCTACTGCCCATATTGCTTGGGTGCCAAACGTATATTCAGTGAACTCCATGAAAAACCTTTTGTTGTGGAGCTTGATCTTCGAGATGATGGATCTCAAATTCAGAGTGTTCTACTAGACCTGACAGGAAAGCGCACTGTTCCTCAAATTTTTGTGAATGGCAAGCACATTGGTGGCTCTGATGATCTGAAAGCCGCGGTTGCTAGTGGTCAGTTGCAGAAACTTCTGGCTTCAAATTGA

Protein sequence

MASEGTREMQSSVDSKKKGVEEKEGKEKEREKSVKLPPPPEKPLPGDCCGSGCVRCVWDVYYEELEDYNKLCEKGPVGLMGLIIYIEDLEADGLCLTVVVAVITIAGLSPRDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLASN

Homology

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BLAST of CaUC01G019560 vs. NCBI nr
Match: XP_021815063.1 (uncharacterized protein LOC110757673 [Prunus avium])

HSP 1 Score: 251.5 bits (641), Expect = 6.6e-63
Identity = 135/214 (63.08%), Postives = 158/214 (73.83%), Query Frame = 0


Query: 4   EGTREMQSSVDSKKKGVEEKEGKEKEREKSVKLPPPPEKPLPGDCCGSGCVRCVWDVYYE 63
           EG    ++      +  + KE + K  +++   PPPPEKP PGDCCGSGCVRCVWDVYY+
Sbjct: 75  EGDAATKTQATQPIETAKSKEEELKPVKEAAPPPPPPEKPEPGDCCGSGCVRCVWDVYYD 134

Query: 64  ELEDYNKLCEKGPVGLMGLIIYIEDLEADGLCLTVVVAVITIAGLSPRDGLTGAEAATST 123
           ELEDYNKL +K      G +  +E L   G  +  V A + + G      +  AEA+TS 
Sbjct: 135 ELEDYNKLYKKRSSCRRGKMRRLELL--GGAAIAAVAAALVLLG-----NVVVAEASTSP 194

Query: 124 SAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLT 183
           SAFVQNVIYSN+IA+FSKSYCPYCL AKRIFSELHE+PFVVELDLRDDG+QIQSVLLD+ 
Sbjct: 195 SAFVQNVIYSNKIAIFSKSYCPYCLRAKRIFSELHEQPFVVELDLRDDGAQIQSVLLDIV 254

Query: 184 GKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLL 218
           G+ TVPQIFVNGKHIGGSDDLKAAV SGQLQKLL
Sbjct: 255 GRTTVPQIFVNGKHIGGSDDLKAAVLSGQLQKLL 281

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BLAST of CaUC01G019560 vs. NCBI nr
Match: XP_008241771.1 (PREDICTED: uncharacterized protein LOC103340163 [Prunus mume])

HSP 1 Score: 248.4 bits (633), Expect = 5.6e-62
Identity = 133/215 (61.86%), Postives = 157/215 (73.02%), Query Frame = 0


Query: 4   EGTREMQSSVDSKKKGVEEKEGKEKEREKSVKLPPPPEKPLPGDCCGSGCVRCVWDVYYE 63
           EG    ++      +  + KE + K  ++    PPPPEKP PGDCCGSGCVRCVWDVYY+
Sbjct: 76  EGDAATKTQATQPIEAAKSKEEELKPVKEEAPPPPPPEKPEPGDCCGSGCVRCVWDVYYD 135

Query: 64  ELEDYNKLCEKGPVGLMGLIIYIEDLEADGLCLTVVVAVITIAGLSPRDGLTGAEAATST 123
           EL++YNKL +K      G +   E L   G  +  V A + + G      +  AEA+TS 
Sbjct: 136 ELDEYNKLYKKRSSCRRGKMRRFELL--GGAAIAAVAAALVLLG-----NVVVAEASTSP 195

Query: 124 SAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLT 183
           SAFVQNVIYSN+IA+FSKSYCPYCL AKRIFSELHE+PFVVELDLRDDG+QIQSVLLD+ 
Sbjct: 196 SAFVQNVIYSNKIAIFSKSYCPYCLRAKRIFSELHEQPFVVELDLRDDGAQIQSVLLDIV 255

Query: 184 GKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLA 219
           G+ TVPQIFVNGKHIGGSDDLKAAV SGQLQKLL+
Sbjct: 256 GRTTVPQIFVNGKHIGGSDDLKAAVLSGQLQKLLS 283

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BLAST of CaUC01G019560 vs. NCBI nr
Match: XP_007202718.2 (uncharacterized protein LOC18770257 [Prunus persica] >XP_020423671.1 uncharacterized protein LOC18770257 [Prunus persica] >ONH96996.1 hypothetical protein PRUPE_7G163800 [Prunus persica] >ONH96997.1 hypothetical protein PRUPE_7G163800 [Prunus persica])

HSP 1 Score: 248.1 bits (632), Expect = 7.3e-62
Identity = 133/215 (61.86%), Postives = 158/215 (73.49%), Query Frame = 0


Query: 4   EGTREMQSSVDSKKKGVEEKEGKEKEREKSVKLPPPPEKPLPGDCCGSGCVRCVWDVYYE 63
           EG    ++      +  + KE + K  +++V  PPPPEKP PGDCCGSGCVRCVWDVYY+
Sbjct: 76  EGDAAKKTQATQPIEAAKSKEEELKPVKEAVPPPPPPEKPEPGDCCGSGCVRCVWDVYYD 135

Query: 64  ELEDYNKLCEKGPVGLMGLIIYIEDLEADGLCLTVVVAVITIAGLSPRDGLTGAEAATST 123
           EL++YNKL +K      G +   E L      +  V A + + G      +  AEA+TS 
Sbjct: 136 ELDEYNKLYKKRSSCRRGKMRRFELLGC--AAIAAVAAALVLLG-----NVVVAEASTSP 195

Query: 124 SAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLT 183
           SAFVQNVIYSN+IA+FSKSYCPYCL AKRIFSELHE+PFVVELDLRDDG+QIQSVLLD+ 
Sbjct: 196 SAFVQNVIYSNKIAIFSKSYCPYCLRAKRIFSELHEQPFVVELDLRDDGAQIQSVLLDIV 255

Query: 184 GKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLA 219
           G+ TVPQIFVNGKHIGGSDDLKAAV SGQLQKLL+
Sbjct: 256 GRTTVPQIFVNGKHIGGSDDLKAAVLSGQLQKLLS 283

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BLAST of CaUC01G019560 vs. NCBI nr
Match: CAB4287754.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 247.3 bits (630), Expect = 1.2e-61
Identity = 132/215 (61.40%), Postives = 157/215 (73.02%), Query Frame = 0


Query: 4   EGTREMQSSVDSKKKGVEEKEGKEKEREKSVKLPPPPEKPLPGDCCGSGCVRCVWDVYYE 63
           EG    ++      +  + KE + K  +++   PPPPEKP PGDCCGSGCVRCVWDVYY+
Sbjct: 105 EGDAATKTQATQPIEAAKSKEEELKPVKEAAPPPPPPEKPEPGDCCGSGCVRCVWDVYYD 164

Query: 64  ELEDYNKLCEKGPVGLMGLIIYIEDLEADGLCLTVVVAVITIAGLSPRDGLTGAEAATST 123
           EL++YNKL +K      G +   E L   G  +  V A + + G      +  AEA+TS 
Sbjct: 165 ELDEYNKLYKKRSSCRRGKMRRFELL--GGAAIAAVAAALVLLG-----NVVVAEASTSP 224

Query: 124 SAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLT 183
           SAFVQNVIYSN+I +FSKSYCPYCL AKRIFSELHE+PFVVELDLRDDG+QIQSVLLD+ 
Sbjct: 225 SAFVQNVIYSNKIVIFSKSYCPYCLRAKRIFSELHEQPFVVELDLRDDGAQIQSVLLDIV 284

Query: 184 GKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLA 219
           G+ TVPQIFVNGKHIGGSDDLKAAV SGQLQKLL+
Sbjct: 285 GRTTVPQIFVNGKHIGGSDDLKAAVLSGQLQKLLS 312

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BLAST of CaUC01G019560 vs. NCBI nr
Match: XP_034223058.1 (uncharacterized protein LOC117633526 [Prunus dulcis] >VVA09826.1 PREDICTED: glutaredoxin-C4 [Prunus dulcis])

HSP 1 Score: 247.3 bits (630), Expect = 1.2e-61
Identity = 132/215 (61.40%), Postives = 158/215 (73.49%), Query Frame = 0


Query: 4   EGTREMQSSVDSKKKGVEEKEGKEKEREKSVKLPPPPEKPLPGDCCGSGCVRCVWDVYYE 63
           EG    ++      +  + KE + K  +++   PPPPEKP PGDCCGSGCVRCVWDVYY+
Sbjct: 76  EGDAATKTQATQPIEAAKSKEEELKPVKEAAPPPPPPEKPEPGDCCGSGCVRCVWDVYYD 135

Query: 64  ELEDYNKLCEKGPVGLMGLIIYIEDLEADGLCLTVVVAVITIAGLSPRDGLTGAEAATST 123
           EL++YNKL +K      G +  +E L      +  V A + + G      +  AEA+TS 
Sbjct: 136 ELDEYNKLYKKRSSCRRGKMRRLELLGC--AAIAAVAAALVLLG-----NVVVAEASTSP 195

Query: 124 SAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLT 183
           SAFVQNVIYSN+IA+FSKSYCPYCL AKRIFSELHE+PFVVELDLRDDG+QIQSVLLD+ 
Sbjct: 196 SAFVQNVIYSNKIAIFSKSYCPYCLRAKRIFSELHEQPFVVELDLRDDGAQIQSVLLDIV 255

Query: 184 GKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLA 219
           G+ TVPQIFVNGKHIGGSDDLKAAV SGQLQKLL+
Sbjct: 256 GRTTVPQIFVNGKHIGGSDDLKAAVLSGQLQKLLS 283

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BLAST of CaUC01G019560 vs. ExPASy Swiss-Prot
Match: Q9FVX1 (Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.2e-36
Identity = 81/123 (65.85%), Postives = 95/123 (77.24%), Query Frame = 0


Query: 98  VVVAVITIAGLSPRDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSEL 157
           VV A++    L   D    A AA S SAFVQN I SN+I +FSKSYCPYCL +KRIFS+L
Sbjct: 10  VVAALLLFVVLC--DLSNSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQL 69

Query: 158 HEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLL 217
            E+PFVVELD R+DG QIQ  LL+  G+RTVPQ+FVNGKHIGGSDDL AA+ SGQLQKLL
Sbjct: 70  KEEPFVVELDQREDGDQIQYELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESGQLQKLL 129

Query: 218 ASN 221
           A++
Sbjct: 130 AAS 130

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BLAST of CaUC01G019560 vs. ExPASy Swiss-Prot
Match: Q6H628 (Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.1e-34
Identity = 74/123 (60.16%), Postives = 93/123 (75.61%), Query Frame = 0


Query: 98  VVVAVITIAGLSPRDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSEL 157
           V +AV  +  L+  D    A A  S SAFVQN IYSNRI +FSK+YCPY + AKRIF +L
Sbjct: 8   VPIAVFLLLVLAEAD---PAAATRSPSAFVQNAIYSNRITIFSKTYCPYSMRAKRIFRDL 67

Query: 158 HEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLL 217
            E P++VELDLR+DG +IQSVLLDL G+ TVPQ+FVNG+H+GGSDD   A ++GQLQKLL
Sbjct: 68  KENPYIVELDLREDGREIQSVLLDLVGRHTVPQVFVNGQHVGGSDDTANAHSNGQLQKLL 127

Query: 218 ASN 221
            ++
Sbjct: 128 GNS 127

[Close]

BLAST of CaUC01G019560 vs. ExPASy Swiss-Prot
Match: Q8LFQ6 (Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-25
Identity = 57/116 (49.14%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 102 VITIAGLSPRDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKP 161
           V+ +  L     +  + A++  + FV+  I S++I +FSKSYCPYC  AK +F EL + P
Sbjct: 10  VMLLVALVTFISMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVP 69

Query: 162 FVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLL 218
           +VVELD R+DG  IQ+ L ++ G+RTVPQ+F+NGKH+GGSDD   A  SG+L KLL
Sbjct: 70  YVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGELAKLL 125

[Close]

BLAST of CaUC01G019560 vs. ExPASy Swiss-Prot
Match: Q0DAE4 (Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 3.3e-25
Identity = 59/119 (49.58%), Postives = 82/119 (68.91%), Query Frame = 0


Query: 101 AVITIAGLSPRDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELH-- 160
           A+I +A L      + A    S S+FV++ + ++ + +FSKSYCPYC  AK +F EL   
Sbjct: 15  ALIALAALG-----SAASGTASKSSFVKSTVKAHDVVIFSKSYCPYCRRAKAVFKELELK 74

Query: 161 EKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLL 218
           ++P+VVELD R+DG +IQ  L D+ G+RTVPQ+FV+GKH+GGSDD   A  SG+L KLL
Sbjct: 75  KEPYVVELDQREDGWEIQDALSDMVGRRTVPQVFVHGKHLGGSDDTVEAYESGKLAKLL 128

[Close]

BLAST of CaUC01G019560 vs. ExPASy Swiss-Prot
Match: P55143 (Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-19
Identity = 44/90 (48.89%), Postives = 60/90 (66.67%), Query Frame = 0


Query: 128 QNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRT 187
           + ++ SN + +FSK+YCPYC   K++  +L  K  VVELD   DGS+IQ+ L + TG+RT
Sbjct: 7   KELVSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELDTESDGSEIQTALAEWTGQRT 66

Query: 188 VPQIFVNGKHIGGSDDLKAAVASGQLQKLL 218
           VP +F+ GKHIGG D   A  + GQL  LL
Sbjct: 67  VPNVFIGGKHIGGCDSTTAKHSQGQLVPLL 96

[Close]

BLAST of CaUC01G019560 vs. ExPASy TrEMBL
Match: A0A0A0KKK8 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G504670 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 6.0e-94
Identity = 189/231 (81.82%), Postives = 196/231 (84.85%), Query Frame = 0


Query: 1   MASEGTREMQSSVDSKKKGV-EEKEGKEKEREKSVKLPPPPEKPLPGDCCGSGCVRCVWD 60
           MASEGTREMQSSVDSKKKGV EEK  KEKE+E+ VKLPPPPEKPLPGDCCGSGCVRCVWD
Sbjct: 1   MASEGTREMQSSVDSKKKGVEEEKAEKEKEKEEMVKLPPPPEKPLPGDCCGSGCVRCVWD 60

Query: 61  VYYEELEDYNKLCEKGPVGL-----------MGLIIYIEDLEADGLCLTVVVAVITIAGL 120
           VYYEELEDYNKLCEKG  G            M        +      LT+V+AVIT+A L
Sbjct: 61  VYYEELEDYNKLCEKGSGGTKKEGDDPSKAQMMTTTTTTMMRGFHFQLTLVLAVITLAAL 120

Query: 121 SPRDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDL 180
            PRD LTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDL
Sbjct: 121 YPRDALTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDL 180

Query: 181 RDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLAS 220
           RDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVA+GQLQKLLAS
Sbjct: 181 RDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVANGQLQKLLAS 231

[Close]

BLAST of CaUC01G019560 vs. ExPASy TrEMBL
Match: A0A6P5SMT1 (uncharacterized protein LOC110757673 OS=Prunus avium OX=42229 GN=LOC110757673 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 3.2e-63
Identity = 135/214 (63.08%), Postives = 158/214 (73.83%), Query Frame = 0


Query: 4   EGTREMQSSVDSKKKGVEEKEGKEKEREKSVKLPPPPEKPLPGDCCGSGCVRCVWDVYYE 63
           EG    ++      +  + KE + K  +++   PPPPEKP PGDCCGSGCVRCVWDVYY+
Sbjct: 75  EGDAATKTQATQPIETAKSKEEELKPVKEAAPPPPPPEKPEPGDCCGSGCVRCVWDVYYD 134

Query: 64  ELEDYNKLCEKGPVGLMGLIIYIEDLEADGLCLTVVVAVITIAGLSPRDGLTGAEAATST 123
           ELEDYNKL +K      G +  +E L   G  +  V A + + G      +  AEA+TS 
Sbjct: 135 ELEDYNKLYKKRSSCRRGKMRRLELL--GGAAIAAVAAALVLLG-----NVVVAEASTSP 194

Query: 124 SAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLT 183
           SAFVQNVIYSN+IA+FSKSYCPYCL AKRIFSELHE+PFVVELDLRDDG+QIQSVLLD+ 
Sbjct: 195 SAFVQNVIYSNKIAIFSKSYCPYCLRAKRIFSELHEQPFVVELDLRDDGAQIQSVLLDIV 254

Query: 184 GKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLL 218
           G+ TVPQIFVNGKHIGGSDDLKAAV SGQLQKLL
Sbjct: 255 GRTTVPQIFVNGKHIGGSDDLKAAVLSGQLQKLL 281

[Close]

BLAST of CaUC01G019560 vs. ExPASy TrEMBL
Match: A0A251NCG7 (Glutaredoxin domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_7G163800 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 3.5e-62
Identity = 133/215 (61.86%), Postives = 158/215 (73.49%), Query Frame = 0


Query: 4   EGTREMQSSVDSKKKGVEEKEGKEKEREKSVKLPPPPEKPLPGDCCGSGCVRCVWDVYYE 63
           EG    ++      +  + KE + K  +++V  PPPPEKP PGDCCGSGCVRCVWDVYY+
Sbjct: 76  EGDAAKKTQATQPIEAAKSKEEELKPVKEAVPPPPPPEKPEPGDCCGSGCVRCVWDVYYD 135

Query: 64  ELEDYNKLCEKGPVGLMGLIIYIEDLEADGLCLTVVVAVITIAGLSPRDGLTGAEAATST 123
           EL++YNKL +K      G +   E L      +  V A + + G      +  AEA+TS 
Sbjct: 136 ELDEYNKLYKKRSSCRRGKMRRFELLGC--AAIAAVAAALVLLG-----NVVVAEASTSP 195

Query: 124 SAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLT 183
           SAFVQNVIYSN+IA+FSKSYCPYCL AKRIFSELHE+PFVVELDLRDDG+QIQSVLLD+ 
Sbjct: 196 SAFVQNVIYSNKIAIFSKSYCPYCLRAKRIFSELHEQPFVVELDLRDDGAQIQSVLLDIV 255

Query: 184 GKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLA 219
           G+ TVPQIFVNGKHIGGSDDLKAAV SGQLQKLL+
Sbjct: 256 GRTTVPQIFVNGKHIGGSDDLKAAVLSGQLQKLLS 283

[Close]

BLAST of CaUC01G019560 vs. ExPASy TrEMBL
Match: A0A5E4E3D6 (PREDICTED: glutaredoxin-C4 OS=Prunus dulcis OX=3755 GN=ALMOND_2B009377 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 6.0e-62
Identity = 132/215 (61.40%), Postives = 158/215 (73.49%), Query Frame = 0


Query: 4   EGTREMQSSVDSKKKGVEEKEGKEKEREKSVKLPPPPEKPLPGDCCGSGCVRCVWDVYYE 63
           EG    ++      +  + KE + K  +++   PPPPEKP PGDCCGSGCVRCVWDVYY+
Sbjct: 76  EGDAATKTQATQPIEAAKSKEEELKPVKEAAPPPPPPEKPEPGDCCGSGCVRCVWDVYYD 135

Query: 64  ELEDYNKLCEKGPVGLMGLIIYIEDLEADGLCLTVVVAVITIAGLSPRDGLTGAEAATST 123
           EL++YNKL +K      G +  +E L      +  V A + + G      +  AEA+TS 
Sbjct: 136 ELDEYNKLYKKRSSCRRGKMRRLELLGC--AAIAAVAAALVLLG-----NVVVAEASTSP 195

Query: 124 SAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLT 183
           SAFVQNVIYSN+IA+FSKSYCPYCL AKRIFSELHE+PFVVELDLRDDG+QIQSVLLD+ 
Sbjct: 196 SAFVQNVIYSNKIAIFSKSYCPYCLRAKRIFSELHEQPFVVELDLRDDGAQIQSVLLDIV 255

Query: 184 GKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLA 219
           G+ TVPQIFVNGKHIGGSDDLKAAV SGQLQKLL+
Sbjct: 256 GRTTVPQIFVNGKHIGGSDDLKAAVLSGQLQKLLS 283

[Close]

BLAST of CaUC01G019560 vs. ExPASy TrEMBL
Match: A0A6J5VIR9 (Glutaredoxin domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS45769 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 6.0e-62
Identity = 132/215 (61.40%), Postives = 157/215 (73.02%), Query Frame = 0


Query: 4   EGTREMQSSVDSKKKGVEEKEGKEKEREKSVKLPPPPEKPLPGDCCGSGCVRCVWDVYYE 63
           EG    ++      +  + KE + K  +++   PPPPEKP PGDCCGSGCVRCVWDVYY+
Sbjct: 105 EGDAATKTQATQPIEAAKSKEEELKPVKEAAPPPPPPEKPEPGDCCGSGCVRCVWDVYYD 164

Query: 64  ELEDYNKLCEKGPVGLMGLIIYIEDLEADGLCLTVVVAVITIAGLSPRDGLTGAEAATST 123
           EL++YNKL +K      G +   E L   G  +  V A + + G      +  AEA+TS 
Sbjct: 165 ELDEYNKLYKKRSSCRRGKMRRFELL--GGAAIAAVAAALVLLG-----NVVVAEASTSP 224

Query: 124 SAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLT 183
           SAFVQNVIYSN+I +FSKSYCPYCL AKRIFSELHE+PFVVELDLRDDG+QIQSVLLD+ 
Sbjct: 225 SAFVQNVIYSNKIVIFSKSYCPYCLRAKRIFSELHEQPFVVELDLRDDGAQIQSVLLDIV 284

Query: 184 GKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLA 219
           G+ TVPQIFVNGKHIGGSDDLKAAV SGQLQKLL+
Sbjct: 285 GRTTVPQIFVNGKHIGGSDDLKAAVLSGQLQKLLS 312

[Close]

BLAST of CaUC01G019560 vs. TAIR 10
Match: AT1G77370.1 (Glutaredoxin family protein )

HSP 1 Score: 153.3 bits (386), Expect = 2.3e-37
Identity = 81/123 (65.85%), Postives = 95/123 (77.24%), Query Frame = 0


Query: 98  VVVAVITIAGLSPRDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSEL 157
           VV A++    L   D    A AA S SAFVQN I SN+I +FSKSYCPYCL +KRIFS+L
Sbjct: 10  VVAALLLFVVLC--DLSNSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQL 69

Query: 158 HEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLL 217
            E+PFVVELD R+DG QIQ  LL+  G+RTVPQ+FVNGKHIGGSDDL AA+ SGQLQKLL
Sbjct: 70  KEEPFVVELDQREDGDQIQYELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESGQLQKLL 129

Query: 218 ASN 221
           A++
Sbjct: 130 AAS 130

[Close]

BLAST of CaUC01G019560 vs. TAIR 10
Match: AT5G20500.1 (Glutaredoxin family protein )

HSP 1 Score: 118.2 bits (295), Expect = 8.1e-27
Identity = 57/116 (49.14%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 102 VITIAGLSPRDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKP 161
           V+ +  L     +  + A++  + FV+  I S++I +FSKSYCPYC  AK +F EL + P
Sbjct: 10  VMLLVALVTFISMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVP 69

Query: 162 FVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLL 218
           +VVELD R+DG  IQ+ L ++ G+RTVPQ+F+NGKH+GGSDD   A  SG+L KLL
Sbjct: 70  YVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGELAKLL 125

[Close]

BLAST of CaUC01G019560 vs. TAIR 10
Match: AT5G17280.1 (CONTAINS InterPro DOMAIN/s: Oxidoreductase-like, N-terminal (InterPro:IPR019180); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 89.0 bits (219), Expect = 5.3e-18
Identity = 41/65 (63.08%), Postives = 52/65 (80.00%), Query Frame = 0


Query: 6   TREMQSSVDSKKKGVEEKEGKEKEREKSVKLPPPPEKPLPGDCCGSGCVRCVWDVYYEEL 65
           T E ++ V++ K+   +KE ++K +E  V +PPPPEKP PGDCCGSGCVRCVWDVYY+EL
Sbjct: 63  TTESKNLVEASKEETNKKETEDK-KEVGVSVPPPPEKPEPGDCCGSGCVRCVWDVYYDEL 122

Query: 66  EDYNK 71
           EDYNK
Sbjct: 123 EDYNK 126

[Close]

BLAST of CaUC01G019560 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 88.2 bits (217), Expect = 9.0e-18
Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 128 QNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRT 187
           + ++ S  + +FSK+YCPYC+  K +  +L  K   VELD   DGSQIQS L + TG+RT
Sbjct: 7   KEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRT 66

Query: 188 VPQIFVNGKHIGGSDDLKAAVASGQLQKLL 218
           VP +F+ G HIGG D        G+L  LL
Sbjct: 67  VPNVFIGGNHIGGCDATSNLHKDGKLVPLL 96

[Close]

BLAST of CaUC01G019560 vs. TAIR 10
Match: AT5G40370.2 (Glutaredoxin family protein )

HSP 1 Score: 82.0 bits (201), Expect = 6.4e-16
Identity = 40/91 (43.96%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 127 VQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKR 186
           + + +  N   + SK+YCPYC+  K +  +L  K   VELD   DGSQIQS L + TG+R
Sbjct: 31  ILSYLIGNFSGICSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQR 90

Query: 187 TVPQIFVNGKHIGGSDDLKAAVASGQLQKLL 218
           TVP +F+ G HIGG D        G+L  LL
Sbjct: 91  TVPNVFIGGNHIGGCDATSNLHKDGKLVPLL 121

The following BLAST results are available for this feature:

BLAST of CaUC01G019560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_021815063.1	6.6e-63	63.08	uncharacterized protein LOC110757673 [Prunus avium]	[more]
XP_008241771.1	5.6e-62	61.86	PREDICTED: uncharacterized protein LOC103340163 [Prunus mume]	[more]
XP_007202718.2	7.3e-62	61.86	uncharacterized protein LOC18770257 [Prunus persica] >XP_020423671.1 uncharacter...	[more]
CAB4287754.1	1.2e-61	61.40	unnamed protein product [Prunus armeniaca]	[more]
XP_034223058.1	1.2e-61	61.40	uncharacterized protein LOC117633526 [Prunus dulcis] >VVA09826.1 PREDICTED: glut...	[more]

BLAST of CaUC01G019560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVX1	3.2e-36	65.85	Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1	[more]
Q6H628	5.1e-34	60.16	Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2...	[more]
Q8LFQ6	1.1e-25	49.14	Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2	[more]
Q0DAE4	3.3e-25	49.58	Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2	[more]
P55143	1.2e-19	48.89	Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1	[more]

BLAST of CaUC01G019560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKK8	6.0e-94	81.82	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G50467...	[more]
A0A6P5SMT1	3.2e-63	63.08	uncharacterized protein LOC110757673 OS=Prunus avium OX=42229 GN=LOC110757673 PE...	[more]
A0A251NCG7	3.5e-62	61.86	Glutaredoxin domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_7G1638...	[more]
A0A5E4E3D6	6.0e-62	61.40	PREDICTED: glutaredoxin-C4 OS=Prunus dulcis OX=3755 GN=ALMOND_2B009377 PE=3 SV=1	[more]
A0A6J5VIR9	6.0e-62	61.40	Glutaredoxin domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LO...	[more]

BLAST of CaUC01G019560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77370.1	2.3e-37	65.85	Glutaredoxin family protein	[more]
AT5G20500.1	8.1e-27	49.14	Glutaredoxin family protein	[more]
AT5G17280.1	5.3e-18	63.08	CONTAINS InterPro DOMAIN/s: Oxidoreductase-like, N-terminal (InterPro:IPR019180)...	[more]
AT5G40370.1	9.0e-18	45.56	Glutaredoxin family protein	[more]
AT5G40370.2	6.4e-16	43.96	Glutaredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 195..208 score: 47.62 coord: 181..194 score: 52.38 coord: 136..154 score: 40.35
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 136..198 e-value: 1.7E-15 score: 56.9
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 117..220 e-value: 3.3E-35 score: 122.1
None	No IPR available	PIRSR	PIRSR005894-2	PIRSR005894-2	coord: 123..218 e-value: 3.8E-7 score: 27.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 110..219
None	No IPR available	PANTHER	PTHR45694:SF4	GLUTAREDOXIN-C3	coord: 110..219
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 124..220 score: 22.46195
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 135..216 e-value: 3.24438E-41 score: 133.434
IPR011899	Glutaredoxin, eukaryotic/virial	TIGRFAM	TIGR02180	TIGR02180	coord: 136..217 e-value: 3.1E-28 score: 95.8
IPR019180	Oxidoreductase-like, N-terminal	PFAM	PF09791	Oxidored-like	coord: 34..72 e-value: 2.7E-14 score: 52.6
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 138..153
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 125..218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G019560.1	CaUC01G019560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
cellular_component	GO:0016020	membrane
molecular_function	GO:0004362	glutathione-disulfide reductase (NADPH) activity
molecular_function	GO:0097573	glutathione oxidoreductase activity