CaUC11G210680 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G210680
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr11: 22651721 .. 22652203 (+)
RNA-Seq Expression	CaUC11G210680
Synteny	CaUC11G210680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCTCAAGAAAACTCCAGCTTCCAACCCATTAATGGCGGCTCCACCCCGATTACTGAATCACTTCCTCTCTGTAGCCTGGCGTTGAAATCAATTGACCATCATGAGAAAGAAGACCATGGCTATGAAAATGTCGATCGTTCTTCGGAAAAAAGAAGTAATGGAGTTCATAGAAAGAATAATTCTTGCTCGAGGGATAGAAGGATTAATGAGATAGCAATTGATAGCGATGCCGAAGAAGATGAGAAGATGGATATGCTGTGGGAAGATTTCAATGAAGAATTGCTGAAGAATTTGAGTTCCAGATTTGGGTCTCATAAGTTGCCGGAACTTGAAGACTTTGAGTCGGAAGAAGCAACGGACGGTGGCGGGGCATTGCTGTCGGCAAGGATGGCAGGTGTGGTAGTGATAATGAAGGTGCTGAAGAAGCTTCTTTTTCTGCATAGCTTTCGCAGGAAGCTCAAAGCTCGGACATGGTGA

mRNA sequence

ATGGAACCTCAAGAAAACTCCAGCTTCCAACCCATTAATGGCGGCTCCACCCCGATTACTGAATCACTTCCTCTCTGTAGCCTGGCGTTGAAATCAATTGACCATCATGAGAAAGAAGACCATGGCTATGAAAATGTCGATCGTTCTTCGGAAAAAAGAAGTAATGGAGTTCATAGAAAGAATAATTCTTGCTCGAGGGATAGAAGGATTAATGAGATAGCAATTGATAGCGATGCCGAAGAAGATGAGAAGATGGATATGCTGTGGGAAGATTTCAATGAAGAATTGCTGAAGAATTTGAGTTCCAGATTTGGGTCTCATAAGTTGCCGGAACTTGAAGACTTTGAGTCGGAAGAAGCAACGGACGGTGGCGGGGCATTGCTGTCGGCAAGGATGGCAGGTGTGGTAGTGATAATGAAGGTGCTGAAGAAGCTTCTTTTTCTGCATAGCTTTCGCAGGAAGCTCAAAGCTCGGACATGGTGA

Coding sequence (CDS)

ATGGAACCTCAAGAAAACTCCAGCTTCCAACCCATTAATGGCGGCTCCACCCCGATTACTGAATCACTTCCTCTCTGTAGCCTGGCGTTGAAATCAATTGACCATCATGAGAAAGAAGACCATGGCTATGAAAATGTCGATCGTTCTTCGGAAAAAAGAAGTAATGGAGTTCATAGAAAGAATAATTCTTGCTCGAGGGATAGAAGGATTAATGAGATAGCAATTGATAGCGATGCCGAAGAAGATGAGAAGATGGATATGCTGTGGGAAGATTTCAATGAAGAATTGCTGAAGAATTTGAGTTCCAGATTTGGGTCTCATAAGTTGCCGGAACTTGAAGACTTTGAGTCGGAAGAAGCAACGGACGGTGGCGGGGCATTGCTGTCGGCAAGGATGGCAGGTGTGGTAGTGATAATGAAGGTGCTGAAGAAGCTTCTTTTTCTGCATAGCTTTCGCAGGAAGCTCAAAGCTCGGACATGGTGA

Protein sequence

MEPQENSSFQPINGGSTPITESLPLCSLALKSIDHHEKEDHGYENVDRSSEKRSNGVHRKNNSCSRDRRINEIAIDSDAEEDEKMDMLWEDFNEELLKNLSSRFGSHKLPELEDFESEEATDGGGALLSARMAGVVVIMKVLKKLLFLHSFRRKLKARTW

Homology

[Close]

BLAST of CaUC11G210680 vs. NCBI nr
Match: XP_011650206.1 (uncharacterized protein LOC105434762 [Cucumis sativus] >KGN63099.1 hypothetical protein Csa_022432 [Cucumis sativus])

HSP 1 Score: 230.3 bits (586), Expect = 1.1e-56
Identity = 130/164 (79.27%), Postives = 138/164 (84.15%), Query Frame = 0


Query: 1   MEPQENSSFQPINGGSTPITESLPLCSLALKSIDHHEKEDHGYENVDRSSEKRSNGVHRK 60
           ME QEN SFQPINGGSTPITES PL S   +SIDHHEKED    NVD SSE RSNG HRK
Sbjct: 1   MEAQENFSFQPINGGSTPITESPPLAS---ESIDHHEKEDQSDGNVDCSSEIRSNGCHRK 60

Query: 61  NNSCSRD-RRINEIAIDSDAEEDEKMDMLWEDFNEELLKNLSSRFGSHKLPELEDFESEE 120
           +NSCS D RR NEIAI+SD EEDEKMDMLWEDFNEELLKNLSSRFGS +LPEL+D ESEE
Sbjct: 61  SNSCSGDSRRTNEIAINSDDEEDEKMDMLWEDFNEELLKNLSSRFGSRRLPELDDLESEE 120

Query: 121 ATDGG---GALLSARMAGVVVIMKVLKKLLFLHSFRRKLKARTW 161
           A + G   GA+LSARMA VVVIMKVLKKLLFLH+FRRKLKARTW
Sbjct: 121 AMEDGSSSGAMLSARMASVVVIMKVLKKLLFLHNFRRKLKARTW 161

[Close]

BLAST of CaUC11G210680 vs. NCBI nr
Match: XP_008441623.1 (PREDICTED: uncharacterized protein LOC103485703 [Cucumis melo] >KAA0037012.1 uncharacterized protein E6C27_scaffold86G00980 [Cucumis melo var. makuwa] >TYK06638.1 uncharacterized protein E5676_scaffold453G001160 [Cucumis melo var. makuwa])

HSP 1 Score: 226.5 bits (576), Expect = 1.7e-55
Identity = 128/164 (78.05%), Postives = 135/164 (82.32%), Query Frame = 0


Query: 1   MEPQENSSFQPINGGSTPITESLPLCSLALKSIDHHEKEDHGYENVDRSSEKRSNGVHRK 60
           ME QEN  FQPING STPITES PL S   KSIDHHEKED    N+D SSE RSNG HRK
Sbjct: 1   MEAQENFGFQPINGSSTPITESPPLAS---KSIDHHEKEDQSDGNIDCSSEIRSNGGHRK 60

Query: 61  NNSCSRD-RRINEIAIDSDAEEDEKMDMLWEDFNEELLKNLSSRFGSHKLPELEDFESEE 120
            NSCS D RR NEIAIDSD EEDEKMDMLWEDFNEEL+KNLSSRFGS +LPEL+D ESEE
Sbjct: 61  INSCSGDSRRTNEIAIDSDDEEDEKMDMLWEDFNEELMKNLSSRFGSRRLPELDDLESEE 120

Query: 121 ATDGG---GALLSARMAGVVVIMKVLKKLLFLHSFRRKLKARTW 161
           A + G   GA+LSARMA VVVIMKVLKKLLFLH+FRRKLKARTW
Sbjct: 121 AMEDGSSSGAMLSARMASVVVIMKVLKKLLFLHNFRRKLKARTW 161

[Close]

BLAST of CaUC11G210680 vs. NCBI nr
Match: XP_022152473.1 (uncharacterized protein LOC111020194 [Momordica charantia])

HSP 1 Score: 174.1 bits (440), Expect = 9.7e-40
Identity = 109/164 (66.46%), Postives = 120/164 (73.17%), Query Frame = 0


Query: 1   MEPQENSSFQPINGGSTPITESLPLCSLAL--KSIDHHEKEDHGYENVDRS-SEKRSNGV 60
           M  +E  SF   +G S+PITES PL  L+   KSIDH     HGY N+D S +EKRS G 
Sbjct: 1   MAAREGFSFPSFHGSSSPITESPPLWCLSSSPKSIDH-----HGYGNIDCSEAEKRSYGG 60

Query: 61  HRKNNSCSRD-RRINEIAIDSDAEEDEKMDMLWEDFNEELLKNLSSRFGSHKLPELEDFE 120
           HRK NSC+ D RR  E  IDSD EEDEKMD+LWEDFNEELL NLSSRFGS ++PELE  +
Sbjct: 61  HRKVNSCNLDVRRARERVIDSDEEEDEKMDVLWEDFNEELLNNLSSRFGSGRVPELEYLK 120

Query: 121 SEEATDGGGALLSARMAGVVVIMKVLKKLLFLHSFRRKLKARTW 161
           SEE      ALLSARMA VVVIMKVLKKLLFLHSFRRK KARTW
Sbjct: 121 SEEPK----ALLSARMASVVVIMKVLKKLLFLHSFRRKPKARTW 155

[Close]

BLAST of CaUC11G210680 vs. NCBI nr
Match: XP_022939117.1 (uncharacterized protein LOC111445118 [Cucurbita moschata] >KAG6578325.1 hypothetical protein SDJN03_22773, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015903.1 hypothetical protein SDJN02_21006, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 170.6 bits (431), Expect = 1.1e-38
Identity = 107/166 (64.46%), Postives = 116/166 (69.88%), Query Frame = 0


Query: 1   MEPQENSSFQPINGGSTPITESLPLCSLALKSIDHHEKEDHGYENVDRSSEKRSNGVHRK 60
           ME  E+ SFQPINGG+TPIT S PL  L  K +  HEKED G  NV  SSEKR N     
Sbjct: 1   MEAPEDFSFQPINGGTTPITGSPPLWGLPQKPMGRHEKEDGGCRNVG-SSEKRRN----- 60

Query: 61  NNSCSRDRRINEIAIDSDAEEDEKMDMLWEDFNEELLKNLSSRFGSHKLPELEDFESEEA 120
                          DSD EEDEKMD+LWEDFNEELLKNLSSR+GS +LPELE  ES+EA
Sbjct: 61  ---------------DSDEEEDEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKEA 120

Query: 121 -TDGG------GALLSARMAGVVVIMKVLKKLLFLHSFRRKLKART 160
             DGG      GALLSARMAGVVV+MKVLKK+LFLHSFRRKLKART
Sbjct: 121 KKDGGGRGGSSGALLSARMAGVVVMMKVLKKILFLHSFRRKLKART 145

[Close]

BLAST of CaUC11G210680 vs. NCBI nr
Match: XP_022993375.1 (uncharacterized protein LOC111489418 [Cucurbita maxima])

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-36
Identity = 107/166 (64.46%), Postives = 115/166 (69.28%), Query Frame = 0


Query: 1   MEPQENSSFQPINGGSTPITESLPLCSLALKSIDHHEKEDHGYENVDRSSEKRSNGVHRK 60
           ME  E+ SFQPIN GSTPI  S PL  L  K +D HEKED G  NV  SSEKR N     
Sbjct: 1   MEAPEDFSFQPIN-GSTPIAGSPPLWGLPQKPMDLHEKEDGGCRNVG-SSEKRRN----- 60

Query: 61  NNSCSRDRRINEIAIDSDAEEDEKMDMLWEDFNEELLKNLSSRFGSHKLPELEDFESEEA 120
                          DSD EEDEKMD+LWEDFNEELLKNLSSR+GS +LPELE  ES+EA
Sbjct: 61  ---------------DSDEEEDEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKEA 120

Query: 121 -TDGG------GALLSARMAGVVVIMKVLKKLLFLHSFRRKLKART 160
             DGG      GALLSARMAGVVV+MKVLKK+LFLHSFRRKLKART
Sbjct: 121 KKDGGGRGGSSGALLSARMAGVVVMMKVLKKILFLHSFRRKLKART 144

[Close]

BLAST of CaUC11G210680 vs. ExPASy TrEMBL
Match: A0A0A0LQ09 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402070 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 5.5e-57
Identity = 130/164 (79.27%), Postives = 138/164 (84.15%), Query Frame = 0


Query: 1   MEPQENSSFQPINGGSTPITESLPLCSLALKSIDHHEKEDHGYENVDRSSEKRSNGVHRK 60
           ME QEN SFQPINGGSTPITES PL S   +SIDHHEKED    NVD SSE RSNG HRK
Sbjct: 1   MEAQENFSFQPINGGSTPITESPPLAS---ESIDHHEKEDQSDGNVDCSSEIRSNGCHRK 60

Query: 61  NNSCSRD-RRINEIAIDSDAEEDEKMDMLWEDFNEELLKNLSSRFGSHKLPELEDFESEE 120
           +NSCS D RR NEIAI+SD EEDEKMDMLWEDFNEELLKNLSSRFGS +LPEL+D ESEE
Sbjct: 61  SNSCSGDSRRTNEIAINSDDEEDEKMDMLWEDFNEELLKNLSSRFGSRRLPELDDLESEE 120

Query: 121 ATDGG---GALLSARMAGVVVIMKVLKKLLFLHSFRRKLKARTW 161
           A + G   GA+LSARMA VVVIMKVLKKLLFLH+FRRKLKARTW
Sbjct: 121 AMEDGSSSGAMLSARMASVVVIMKVLKKLLFLHNFRRKLKARTW 161

[Close]

BLAST of CaUC11G210680 vs. ExPASy TrEMBL
Match: A0A5D3C651 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001160 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 8.0e-56
Identity = 128/164 (78.05%), Postives = 135/164 (82.32%), Query Frame = 0


Query: 1   MEPQENSSFQPINGGSTPITESLPLCSLALKSIDHHEKEDHGYENVDRSSEKRSNGVHRK 60
           ME QEN  FQPING STPITES PL S   KSIDHHEKED    N+D SSE RSNG HRK
Sbjct: 1   MEAQENFGFQPINGSSTPITESPPLAS---KSIDHHEKEDQSDGNIDCSSEIRSNGGHRK 60

Query: 61  NNSCSRD-RRINEIAIDSDAEEDEKMDMLWEDFNEELLKNLSSRFGSHKLPELEDFESEE 120
            NSCS D RR NEIAIDSD EEDEKMDMLWEDFNEEL+KNLSSRFGS +LPEL+D ESEE
Sbjct: 61  INSCSGDSRRTNEIAIDSDDEEDEKMDMLWEDFNEELMKNLSSRFGSRRLPELDDLESEE 120

Query: 121 ATDGG---GALLSARMAGVVVIMKVLKKLLFLHSFRRKLKARTW 161
           A + G   GA+LSARMA VVVIMKVLKKLLFLH+FRRKLKARTW
Sbjct: 121 AMEDGSSSGAMLSARMASVVVIMKVLKKLLFLHNFRRKLKARTW 161

[Close]

BLAST of CaUC11G210680 vs. ExPASy TrEMBL
Match: A0A1S3B3U6 (uncharacterized protein LOC103485703 OS=Cucumis melo OX=3656 GN=LOC103485703 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 8.0e-56
Identity = 128/164 (78.05%), Postives = 135/164 (82.32%), Query Frame = 0


Query: 1   MEPQENSSFQPINGGSTPITESLPLCSLALKSIDHHEKEDHGYENVDRSSEKRSNGVHRK 60
           ME QEN  FQPING STPITES PL S   KSIDHHEKED    N+D SSE RSNG HRK
Sbjct: 1   MEAQENFGFQPINGSSTPITESPPLAS---KSIDHHEKEDQSDGNIDCSSEIRSNGGHRK 60

Query: 61  NNSCSRD-RRINEIAIDSDAEEDEKMDMLWEDFNEELLKNLSSRFGSHKLPELEDFESEE 120
            NSCS D RR NEIAIDSD EEDEKMDMLWEDFNEEL+KNLSSRFGS +LPEL+D ESEE
Sbjct: 61  INSCSGDSRRTNEIAIDSDDEEDEKMDMLWEDFNEELMKNLSSRFGSRRLPELDDLESEE 120

Query: 121 ATDGG---GALLSARMAGVVVIMKVLKKLLFLHSFRRKLKARTW 161
           A + G   GA+LSARMA VVVIMKVLKKLLFLH+FRRKLKARTW
Sbjct: 121 AMEDGSSSGAMLSARMASVVVIMKVLKKLLFLHNFRRKLKARTW 161

[Close]

BLAST of CaUC11G210680 vs. ExPASy TrEMBL
Match: A0A6J1DEY5 (uncharacterized protein LOC111020194 OS=Momordica charantia OX=3673 GN=LOC111020194 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 4.7e-40
Identity = 109/164 (66.46%), Postives = 120/164 (73.17%), Query Frame = 0


Query: 1   MEPQENSSFQPINGGSTPITESLPLCSLAL--KSIDHHEKEDHGYENVDRS-SEKRSNGV 60
           M  +E  SF   +G S+PITES PL  L+   KSIDH     HGY N+D S +EKRS G 
Sbjct: 1   MAAREGFSFPSFHGSSSPITESPPLWCLSSSPKSIDH-----HGYGNIDCSEAEKRSYGG 60

Query: 61  HRKNNSCSRD-RRINEIAIDSDAEEDEKMDMLWEDFNEELLKNLSSRFGSHKLPELEDFE 120
           HRK NSC+ D RR  E  IDSD EEDEKMD+LWEDFNEELL NLSSRFGS ++PELE  +
Sbjct: 61  HRKVNSCNLDVRRARERVIDSDEEEDEKMDVLWEDFNEELLNNLSSRFGSGRVPELEYLK 120

Query: 121 SEEATDGGGALLSARMAGVVVIMKVLKKLLFLHSFRRKLKARTW 161
           SEE      ALLSARMA VVVIMKVLKKLLFLHSFRRK KARTW
Sbjct: 121 SEEPK----ALLSARMASVVVIMKVLKKLLFLHSFRRKPKARTW 155

[Close]

BLAST of CaUC11G210680 vs. ExPASy TrEMBL
Match: A0A6J1FFX5 (uncharacterized protein LOC111445118 OS=Cucurbita moschata OX=3662 GN=LOC111445118 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 5.2e-39
Identity = 107/166 (64.46%), Postives = 116/166 (69.88%), Query Frame = 0


Query: 1   MEPQENSSFQPINGGSTPITESLPLCSLALKSIDHHEKEDHGYENVDRSSEKRSNGVHRK 60
           ME  E+ SFQPINGG+TPIT S PL  L  K +  HEKED G  NV  SSEKR N     
Sbjct: 1   MEAPEDFSFQPINGGTTPITGSPPLWGLPQKPMGRHEKEDGGCRNVG-SSEKRRN----- 60

Query: 61  NNSCSRDRRINEIAIDSDAEEDEKMDMLWEDFNEELLKNLSSRFGSHKLPELEDFESEEA 120
                          DSD EEDEKMD+LWEDFNEELLKNLSSR+GS +LPELE  ES+EA
Sbjct: 61  ---------------DSDEEEDEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKEA 120

Query: 121 -TDGG------GALLSARMAGVVVIMKVLKKLLFLHSFRRKLKART 160
             DGG      GALLSARMAGVVV+MKVLKK+LFLHSFRRKLKART
Sbjct: 121 KKDGGGRGGSSGALLSARMAGVVVMMKVLKKILFLHSFRRKLKART 145

[Close]

BLAST of CaUC11G210680 vs. TAIR 10
Match: AT1G71910.1 (unknown protein; Has 28 Blast hits to 28 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 1.3e-05
Identity = 36/93 (38.71%), Postives = 48/93 (51.61%), Query Frame = 0


Query: 78  DAEEDEKMDMLWEDFNEEL------LKNLSSRFGSHKLPELEDFESEEATDGGGALLSAR 137
           D +E+EKMDMLWED NEEL      L+ +    G  K   L   ES     G G  LS +
Sbjct: 78  DDKEEEKMDMLWEDLNEELPPRSQSLRIVHGGDGGEKKTALFPDESSAVAVGCGMKLSKK 137

Query: 138 M-----AGVVVIMKVLKKLLFLHSFRRKLKART 160
                   V+V+M+VLKKL+ L S  ++   +T
Sbjct: 138 TKKKTNLNVLVLMRVLKKLIVLRSSSQRSPVKT 170

The following BLAST results are available for this feature:

BLAST of CaUC11G210680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650206.1	1.1e-56	79.27	uncharacterized protein LOC105434762 [Cucumis sativus] >KGN63099.1 hypothetical ...	[more]
XP_008441623.1	1.7e-55	78.05	PREDICTED: uncharacterized protein LOC103485703 [Cucumis melo] >KAA0037012.1 unc...	[more]
XP_022152473.1	9.7e-40	66.46	uncharacterized protein LOC111020194 [Momordica charantia]	[more]
XP_022939117.1	1.1e-38	64.46	uncharacterized protein LOC111445118 [Cucurbita moschata] >KAG6578325.1 hypothet...	[more]
XP_022993375.1	1.0e-36	64.46	uncharacterized protein LOC111489418 [Cucurbita maxima]	[more]

BLAST of CaUC11G210680 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC11G210680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ09	5.5e-57	79.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402070 PE=4 SV=1	[more]
A0A5D3C651	8.0e-56	78.05	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B3U6	8.0e-56	78.05	uncharacterized protein LOC103485703 OS=Cucumis melo OX=3656 GN=LOC103485703 PE=...	[more]
A0A6J1DEY5	4.7e-40	66.46	uncharacterized protein LOC111020194 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1FFX5	5.2e-39	64.46	uncharacterized protein LOC111445118 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]

BLAST of CaUC11G210680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71910.1	1.3e-05	38.71	unknown protein; Has 28 Blast hits to 28 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..63
None	No IPR available	PANTHER	PTHR34666:SF7	SUBFAMILY NOT NAMED	coord: 4..160
None	No IPR available	PANTHER	PTHR34666	EXPRESSED PROTEIN	coord: 4..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G210680.1	CaUC11G210680.1	mRNA