CaUC10G190450 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC10G190450
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionF-box domain-containing protein
LocationCiama_Chr10: 24514606 .. 24515397 (-)
RNA-Seq ExpressionCaUC10G190450
SyntenyCaUC10G190450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGAATGAATGCATCCAACTTCCTCCACTTGATTATTCTATGGAGTTTTACTCGTGCCACCTCGGCTATGGATTTGGTTTTAACCCAAACAAAAAACAATACAAAATTGTTAGACTTGCGAGAGTTATACCAAATGGGTTATTTATAGCAAATATTTTCACATTTGGAATAAGTAGTAGTCGTGGTAAATGGATCAGTAGTGTTCCCCTTTTGTCATTCTACGTTATTAATGGTGACAATGATGGTGTTTACTTGAATGGATATCTTTATTGGAATGGATACAATGAAATTGAGGATAGGGATACTGTTCGGAATCCTATTCTTTTACGTTTTGATGTAGAAGATGAGAAATTTCAAAAAGTTTCTTTTCCCCGAGGTGGGGATGATGGAGCTTTTTTTCCTTGTTCTCATATTCATGTCTTTAATGGCACCCTCTATCTCTCAGGTTTCGACTTTGAAGGTGGTACATTTCATATATGGAAGATGGAACGAGATTCATGGATTAAAGAATTTGTTATTTCATTGTCATCGGTTTCGATGGTGGTTCATTGCTACATAAAGTACTATAAAGGGAGTAAATATCACCTCCAACTCATCAAAACTATTGAAGATGGAAAGATCTTGTGTCTTGTTTTCGGAAGGGATTTAATTTTGTATGACTCCAAGACCAAACAGACAGTGGCAGTGGATGATAAACTACAAGATGGAACTAAGGAAAAATTATGGATTTATGAAATTGAGCCCTTCAATTTTGGCTCTCTAAGAAAGATTTTGGGAGTAAATGATTGA

mRNA sequence

ATGACGAATGAATGCATCCAACTTCCTCCACTTGATTATTCTATGGAGTTTTACTCGTGCCACCTCGGCTATGGATTTGGTTTTAACCCAAACAAAAAACAATACAAAATTGTTAGACTTGCGAGAGTTATACCAAATGGGTTATTTATAGCAAATATTTTCACATTTGGAATAAGTAGTAGTCGTGGTAAATGGATCAGTAGTGTTCCCCTTTTGTCATTCTACGTTATTAATGGTGACAATGATGGTGTTTACTTGAATGGATATCTTTATTGGAATGGATACAATGAAATTGAGGATAGGGATACTGTTCGGAATCCTATTCTTTTACGTTTTGATGTAGAAGATGAGAAATTTCAAAAAGTTTCTTTTCCCCGAGGTGGGGATGATGGAGCTTTTTTTCCTTGTTCTCATATTCATGTCTTTAATGGCACCCTCTATCTCTCAGGTTTCGACTTTGAAGGTGGTACATTTCATATATGGAAGATGGAACGAGATTCATGGATTAAAGAATTTGTTATTTCATTGTCATCGGTTTCGATGGTGGTTCATTGCTACATAAAGTACTATAAAGGGAGTAAATATCACCTCCAACTCATCAAAACTATTGAAGATGGAAAGATCTTGTGTCTTGTTTTCGGAAGGGATTTAATTTTGTATGACTCCAAGACCAAACAGACAGTGGCAGTGGATGATAAACTACAAGATGGAACTAAGGAAAAATTATGGATTTATGAAATTGAGCCCTTCAATTTTGGCTCTCTAAGAAAGATTTTGGGAGTAAATGATTGA

Coding sequence (CDS)

ATGACGAATGAATGCATCCAACTTCCTCCACTTGATTATTCTATGGAGTTTTACTCGTGCCACCTCGGCTATGGATTTGGTTTTAACCCAAACAAAAAACAATACAAAATTGTTAGACTTGCGAGAGTTATACCAAATGGGTTATTTATAGCAAATATTTTCACATTTGGAATAAGTAGTAGTCGTGGTAAATGGATCAGTAGTGTTCCCCTTTTGTCATTCTACGTTATTAATGGTGACAATGATGGTGTTTACTTGAATGGATATCTTTATTGGAATGGATACAATGAAATTGAGGATAGGGATACTGTTCGGAATCCTATTCTTTTACGTTTTGATGTAGAAGATGAGAAATTTCAAAAAGTTTCTTTTCCCCGAGGTGGGGATGATGGAGCTTTTTTTCCTTGTTCTCATATTCATGTCTTTAATGGCACCCTCTATCTCTCAGGTTTCGACTTTGAAGGTGGTACATTTCATATATGGAAGATGGAACGAGATTCATGGATTAAAGAATTTGTTATTTCATTGTCATCGGTTTCGATGGTGGTTCATTGCTACATAAAGTACTATAAAGGGAGTAAATATCACCTCCAACTCATCAAAACTATTGAAGATGGAAAGATCTTGTGTCTTGTTTTCGGAAGGGATTTAATTTTGTATGACTCCAAGACCAAACAGACAGTGGCAGTGGATGATAAACTACAAGATGGAACTAAGGAAAAATTATGGATTTATGAAATTGAGCCCTTCAATTTTGGCTCTCTAAGAAAGATTTTGGGAGTAAATGATTGA

Protein sequence

MTNECIQLPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFIANIFTFGISSSRGKWISSVPLLSFYVINGDNDGVYLNGYLYWNGYNEIEDRDTVRNPILLRFDVEDEKFQKVSFPRGGDDGAFFPCSHIHVFNGTLYLSGFDFEGGTFHIWKMERDSWIKEFVISLSSVSMVVHCYIKYYKGSKYHLQLIKTIEDGKILCLVFGRDLILYDSKTKQTVAVDDKLQDGTKEKLWIYEIEPFNFGSLRKILGVND
Homology
BLAST of CaUC10G190450 vs. NCBI nr
Match: KGN59660.1 (hypothetical protein Csa_001105 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 2.1e-52
Identity = 136/290 (46.90%), Postives = 172/290 (59.31%), Query Frame = 0

Query: 1   MTNECIQLPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFIANIFTFG--I 60
           +TNE ++LP  D   + +     +GFG++PNKKQYKIV+L+  I  GL++A+IFT G   
Sbjct: 141 ITNEYVELPLNDAWKKTFYTGYSFGFGYSPNKKQYKIVKLSS-IRRGLYVADIFTIGTFT 200

Query: 61  SSSRGKWISSVPLLSFYVINGDNDGVYLNGYLYWNGYN-EIEDRDTVRNPILLRFDVEDE 120
             S GKW S VP+L  + + G  DGVYLNG LYWNGYN    D       +LLRFDVEDE
Sbjct: 201 RGSYGKW-SRVPILIRFCVLGSGDGVYLNGSLYWNGYNGNYLDMRNGGKVVLLRFDVEDE 260

Query: 121 KFQKVSFPRGGDDGAFFPCSHIHVFNGTLYLSGFDFEG----GTFHIWKM--ERDSWIK- 180
           KF+ VSFP G +D  F   S+I +FN TLYLS FDF      G FH+WK+  E  SW K 
Sbjct: 261 KFEVVSFPHGVEDEVFRGSSNIWIFNNTLYLSCFDFNTNNGIGRFHVWKLMEEGYSWFKL 320

Query: 181 --EFVISLS-----SVSMVVHCYIKY--YKG--------SKYHLQLIKTIEDGKILCLVF 240
             EFVI        S   ++H YI+Y  Y+G        ++YH QLIK  ED K+L L+ 
Sbjct: 321 EQEFVIRQPISNHWSTVALLH-YIRYLKYRGYYDFSSSCTRYHFQLIKVFEDEKMLFLIS 380

Query: 241 GRDLILYDSKTKQTVAVDDKLQDGTKEKLWIYEIE-PFNFGSLRKILGVN 263
            + LILYDSKT+Q     + L      KLWIY+I+   N  SL K LGVN
Sbjct: 381 RKALILYDSKTEQFEVTYNDLNQDQDGKLWIYDIDYSLNVDSLPKTLGVN 427

BLAST of CaUC10G190450 vs. NCBI nr
Match: XP_011652871.1 (F-box/kelch-repeat protein At3g06240 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 2.1e-52
Identity = 136/290 (46.90%), Postives = 172/290 (59.31%), Query Frame = 0

Query: 1   MTNECIQLPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFIANIFTFG--I 60
           +TNE ++LP  D   + +     +GFG++PNKKQYKIV+L+  I  GL++A+IFT G   
Sbjct: 23  ITNEYVELPLNDAWKKTFYTGYSFGFGYSPNKKQYKIVKLSS-IRRGLYVADIFTIGTFT 82

Query: 61  SSSRGKWISSVPLLSFYVINGDNDGVYLNGYLYWNGYN-EIEDRDTVRNPILLRFDVEDE 120
             S GKW S VP+L  + + G  DGVYLNG LYWNGYN    D       +LLRFDVEDE
Sbjct: 83  RGSYGKW-SRVPILIRFCVLGSGDGVYLNGSLYWNGYNGNYLDMRNGGKVVLLRFDVEDE 142

Query: 121 KFQKVSFPRGGDDGAFFPCSHIHVFNGTLYLSGFDFEG----GTFHIWKM--ERDSWIK- 180
           KF+ VSFP G +D  F   S+I +FN TLYLS FDF      G FH+WK+  E  SW K 
Sbjct: 143 KFEVVSFPHGVEDEVFRGSSNIWIFNNTLYLSCFDFNTNNGIGRFHVWKLMEEGYSWFKL 202

Query: 181 --EFVISLS-----SVSMVVHCYIKY--YKG--------SKYHLQLIKTIEDGKILCLVF 240
             EFVI        S   ++H YI+Y  Y+G        ++YH QLIK  ED K+L L+ 
Sbjct: 203 EQEFVIRQPISNHWSTVALLH-YIRYLKYRGYYDFSSSCTRYHFQLIKVFEDEKMLFLIS 262

Query: 241 GRDLILYDSKTKQTVAVDDKLQDGTKEKLWIYEIE-PFNFGSLRKILGVN 263
            + LILYDSKT+Q     + L      KLWIY+I+   N  SL K LGVN
Sbjct: 263 RKALILYDSKTEQFEVTYNDLNQDQDGKLWIYDIDYSLNVDSLPKTLGVN 309

BLAST of CaUC10G190450 vs. NCBI nr
Match: KGN59658.1 (hypothetical protein Csa_001357 [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 9.1e-43
Identity = 127/290 (43.79%), Postives = 165/290 (56.90%), Query Frame = 0

Query: 1   MTNECIQLPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARV-IPN-----------GL 60
           MTNE +    L+ S++FY     +GFG++PNKKQYKIV+L+ + IP+             
Sbjct: 138 MTNEELS---LNNSLKFYP-GSSFGFGYSPNKKQYKIVKLSLIKIPHLRSSYVASHLRSS 197

Query: 61  FIANIFTFG--ISSSRGKW----ISSVPLLSFYVINGDNDGVYLNGYLYWNGYNEIEDRD 120
           ++A IFT G       GKW    + +V +L  +       GVYLNG LYW  YN    R 
Sbjct: 198 YVAEIFTIGKFARGRHGKWRQNRVPAVRVLWSF-------GVYLNGSLYWKAYNTTRIR- 257

Query: 121 TVRNPILLRFDVEDEKFQKVSFPRGGDDGAFFPCSHIHVFNGTLYLSGFD--FEGGTFHI 180
              N +LLRFDVEDEKF+ VSFP+   D AF   S+I +FN TLY+S FD   + G+FH+
Sbjct: 258 --ANAVLLRFDVEDEKFEVVSFPQVVRDDAFLISSNIWIFNNTLYVSYFDSKIDMGSFHV 317

Query: 181 WKM--ERDSWIK---EFVISLS---SVSMVVHCYIKYYKGSKYHLQLIKTIEDGKILCLV 240
           WKM  E  SW+K   +F I  S     S+++  YI+ Y   + H QLIK  ED  +L L+
Sbjct: 318 WKMMEEDYSWVKLEQKFAIMKSIKDHFSLMMVSYIRDYM-IRCHFQLIKVFEDETMLFLI 377

Query: 241 FGRDLILYDSKTKQTVAVDDKLQDGTKEKLWIYEIEPFNFGSLRKILGVN 263
             R LILYDSK  Q  AV D+L      KL I+EI+  NF SL K LGVN
Sbjct: 378 SQRALILYDSKIDQFEAVHDELNQDQDGKLCIHEIDSLNFDSLAKTLGVN 412

BLAST of CaUC10G190450 vs. NCBI nr
Match: XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])

HSP 1 Score: 172.2 bits (435), Expect = 6.1e-39
Identity = 113/264 (42.80%), Postives = 150/264 (56.82%), Query Frame = 0

Query: 1   MTNECIQLPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFIANIFTFGISS 60
           MTNE  +LP      +    +  YG GF+P  KQYK+ R   V     FI  IF FG S 
Sbjct: 139 MTNEYFKLPTFRSKGDSVKDYF-YGLGFSPRTKQYKLARTHYVCHE--FIVEIFAFGTSC 198

Query: 61  SRGKW--ISSVPLLSFYVINGDNDGVYLNGYLYWNGYNEIEDRDTVRNPILLRFDVEDEK 120
              +W  + SVP    Y +N +  GVY NG LYW G  ++ +     + ++ R D+ED+K
Sbjct: 199 ---EWTPVGSVP----YFLN-EYHGVYFNGGLYWVGGQQLPNAGL--SDVIYRLDLEDDK 258

Query: 121 FQKVSFPRGGDDGAFFPCSHIHVFNGTLYLS--GFDFEGGTFHIWKMERD-SWIKEFVIS 180
           F+++SFP  GDD   FP  +I V+N TLYL+    DFE   +H+WKME D SWIKEFV++
Sbjct: 259 FKQISFPLDGDDEGDFP--YIGVYNDTLYLTLCCGDFE---YHVWKMEEDFSWIKEFVLA 318

Query: 181 LSSVSMVVHCYIKYYKGSKYHLQLIKTIEDGKILCLVFGRDLILYDSKTKQTVAVDDKLQ 240
           L      VH  +  +    Y LQLIK  EDG ILCL  G  LILYD KT+ T  + D+  
Sbjct: 319 LPE---NVHHSLPRHHPIGYCLQLIKACEDGNILCLCAGLYLILYDPKTETTELLTDQ-D 378

Query: 241 DGTKEKLWIYEIEPFNFGSLRKIL 260
              K+ +W+Y+I+ FNF SL  IL
Sbjct: 379 FEIKKHMWVYQIDSFNFNSLHNIL 380

BLAST of CaUC10G190450 vs. NCBI nr
Match: XP_004135796.1 (putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical protein Csa_007182 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 2.2e-33
Identity = 105/242 (43.39%), Postives = 139/242 (57.44%), Query Frame = 0

Query: 24  YGFGFNPNKKQYKIVRLARVIPNGLFIANIFTFGISSSRGKW--ISSVP-LLSFYVINGD 83
           YG GF+P   QYK+ R      +  FI +IF FG S    +W  + SVP  L+ Y     
Sbjct: 161 YGLGFSPTTNQYKLARTH--FTHDEFIVDIFAFGTSC---EWTPVGSVPNFLNEY----- 220

Query: 84  NDGVYLNGYLYWNGYNEIEDRD-TVRNPILLRFDVEDEKFQKVSFP-RGGDDGAFFPCSH 143
             GVYLNG LYW G  ++ +   +    ++ R D++DEKF+K+SFP  GGDD       +
Sbjct: 221 -HGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDLKDEKFEKISFPLDGGDD------PY 280

Query: 144 IHVFNGTLYLSGFDFEGGTFHIWKMERD-SWIKEFVISLSSVSMVVHCYIKYYKGSKYHL 203
           I V+NGTLYL+ F  E   +H WKME D SW KEFV++L      VH  ++++    Y+L
Sbjct: 281 IAVYNGTLYLT-FCCEDFDYHAWKMEEDFSWSKEFVLALPE---NVHHSLRHHP-IGYYL 340

Query: 204 QLIKTIEDGKILCLVFGRDLILYDSKTKQTVAVDDKLQDGTKEKLWIYEIEPFNFGSLRK 260
           QLIK  EDG ILCL  G  LILYD  T QTV +        KE +W+++IE F+F SL  
Sbjct: 341 QLIKFCEDGNILCLYAGILLILYDPST-QTVEILTNQDFEIKEAMWVHQIESFSFNSLHN 379

BLAST of CaUC10G190450 vs. ExPASy TrEMBL
Match: A0A0A0LCB8 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G836440 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.0e-52
Identity = 136/290 (46.90%), Postives = 172/290 (59.31%), Query Frame = 0

Query: 1   MTNECIQLPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFIANIFTFG--I 60
           +TNE ++LP  D   + +     +GFG++PNKKQYKIV+L+  I  GL++A+IFT G   
Sbjct: 141 ITNEYVELPLNDAWKKTFYTGYSFGFGYSPNKKQYKIVKLSS-IRRGLYVADIFTIGTFT 200

Query: 61  SSSRGKWISSVPLLSFYVINGDNDGVYLNGYLYWNGYN-EIEDRDTVRNPILLRFDVEDE 120
             S GKW S VP+L  + + G  DGVYLNG LYWNGYN    D       +LLRFDVEDE
Sbjct: 201 RGSYGKW-SRVPILIRFCVLGSGDGVYLNGSLYWNGYNGNYLDMRNGGKVVLLRFDVEDE 260

Query: 121 KFQKVSFPRGGDDGAFFPCSHIHVFNGTLYLSGFDFEG----GTFHIWKM--ERDSWIK- 180
           KF+ VSFP G +D  F   S+I +FN TLYLS FDF      G FH+WK+  E  SW K 
Sbjct: 261 KFEVVSFPHGVEDEVFRGSSNIWIFNNTLYLSCFDFNTNNGIGRFHVWKLMEEGYSWFKL 320

Query: 181 --EFVISLS-----SVSMVVHCYIKY--YKG--------SKYHLQLIKTIEDGKILCLVF 240
             EFVI        S   ++H YI+Y  Y+G        ++YH QLIK  ED K+L L+ 
Sbjct: 321 EQEFVIRQPISNHWSTVALLH-YIRYLKYRGYYDFSSSCTRYHFQLIKVFEDEKMLFLIS 380

Query: 241 GRDLILYDSKTKQTVAVDDKLQDGTKEKLWIYEIE-PFNFGSLRKILGVN 263
            + LILYDSKT+Q     + L      KLWIY+I+   N  SL K LGVN
Sbjct: 381 RKALILYDSKTEQFEVTYNDLNQDQDGKLWIYDIDYSLNVDSLPKTLGVN 427

BLAST of CaUC10G190450 vs. ExPASy TrEMBL
Match: A0A0A0LCZ3 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G836430 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 4.4e-43
Identity = 127/290 (43.79%), Postives = 165/290 (56.90%), Query Frame = 0

Query: 1   MTNECIQLPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARV-IPN-----------GL 60
           MTNE +    L+ S++FY     +GFG++PNKKQYKIV+L+ + IP+             
Sbjct: 138 MTNEELS---LNNSLKFYP-GSSFGFGYSPNKKQYKIVKLSLIKIPHLRSSYVASHLRSS 197

Query: 61  FIANIFTFG--ISSSRGKW----ISSVPLLSFYVINGDNDGVYLNGYLYWNGYNEIEDRD 120
           ++A IFT G       GKW    + +V +L  +       GVYLNG LYW  YN    R 
Sbjct: 198 YVAEIFTIGKFARGRHGKWRQNRVPAVRVLWSF-------GVYLNGSLYWKAYNTTRIR- 257

Query: 121 TVRNPILLRFDVEDEKFQKVSFPRGGDDGAFFPCSHIHVFNGTLYLSGFD--FEGGTFHI 180
              N +LLRFDVEDEKF+ VSFP+   D AF   S+I +FN TLY+S FD   + G+FH+
Sbjct: 258 --ANAVLLRFDVEDEKFEVVSFPQVVRDDAFLISSNIWIFNNTLYVSYFDSKIDMGSFHV 317

Query: 181 WKM--ERDSWIK---EFVISLS---SVSMVVHCYIKYYKGSKYHLQLIKTIEDGKILCLV 240
           WKM  E  SW+K   +F I  S     S+++  YI+ Y   + H QLIK  ED  +L L+
Sbjct: 318 WKMMEEDYSWVKLEQKFAIMKSIKDHFSLMMVSYIRDYM-IRCHFQLIKVFEDETMLFLI 377

Query: 241 FGRDLILYDSKTKQTVAVDDKLQDGTKEKLWIYEIEPFNFGSLRKILGVN 263
             R LILYDSK  Q  AV D+L      KL I+EI+  NF SL K LGVN
Sbjct: 378 SQRALILYDSKIDQFEAVHDELNQDQDGKLCIHEIDSLNFDSLAKTLGVN 412

BLAST of CaUC10G190450 vs. ExPASy TrEMBL
Match: A0A0A0M1M5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.1e-33
Identity = 105/242 (43.39%), Postives = 139/242 (57.44%), Query Frame = 0

Query: 24  YGFGFNPNKKQYKIVRLARVIPNGLFIANIFTFGISSSRGKW--ISSVP-LLSFYVINGD 83
           YG GF+P   QYK+ R      +  FI +IF FG S    +W  + SVP  L+ Y     
Sbjct: 161 YGLGFSPTTNQYKLARTH--FTHDEFIVDIFAFGTSC---EWTPVGSVPNFLNEY----- 220

Query: 84  NDGVYLNGYLYWNGYNEIEDRD-TVRNPILLRFDVEDEKFQKVSFP-RGGDDGAFFPCSH 143
             GVYLNG LYW G  ++ +   +    ++ R D++DEKF+K+SFP  GGDD       +
Sbjct: 221 -HGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDLKDEKFEKISFPLDGGDD------PY 280

Query: 144 IHVFNGTLYLSGFDFEGGTFHIWKMERD-SWIKEFVISLSSVSMVVHCYIKYYKGSKYHL 203
           I V+NGTLYL+ F  E   +H WKME D SW KEFV++L      VH  ++++    Y+L
Sbjct: 281 IAVYNGTLYLT-FCCEDFDYHAWKMEEDFSWSKEFVLALPE---NVHHSLRHHP-IGYYL 340

Query: 204 QLIKTIEDGKILCLVFGRDLILYDSKTKQTVAVDDKLQDGTKEKLWIYEIEPFNFGSLRK 260
           QLIK  EDG ILCL  G  LILYD  T QTV +        KE +W+++IE F+F SL  
Sbjct: 341 QLIKFCEDGNILCLYAGILLILYDPST-QTVEILTNQDFEIKEAMWVHQIESFSFNSLHN 379

BLAST of CaUC10G190450 vs. ExPASy TrEMBL
Match: A0A6J1CQE2 (F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC111013202 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.0e-32
Identity = 96/263 (36.50%), Postives = 142/263 (53.99%), Query Frame = 0

Query: 1   MTNECIQLPPLDYSME-FYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFIANIFTFGIS 60
           MTNE  + P  + S + +Y C   Y FGF+P  KQYK+VR          +   FTFG +
Sbjct: 142 MTNEYFKPPISNASKDRWYYC---YRFGFSPKTKQYKLVRFFYSCDKAAILLETFTFG-T 201

Query: 61  SSRGKWISSVPLLSFYVINGDNDGVYLNGYLYWNGYNEIEDRDTVRNP--ILLRFDVEDE 120
           + +  ++S VP      ++ +   VY NG LYW G         +++P  +L R D+E E
Sbjct: 202 NCKSTYVSCVP----SSMSMEEHSVYFNGSLYWIG-------KQLKHPTNVLYRLDIEKE 261

Query: 121 KFQKVSFPRGGDDGAFFPCSHIHVFNGTLYLSGFDFEGGTFHIWKMERD-SWIKEFVISL 180
           + Q++SFP+ G       C  I VFNG+LYL+        +H+WKME D SW K F + L
Sbjct: 262 ELQEISFPQSGG------CCSIGVFNGSLYLTLAQGRYHAYHVWKMEEDFSWTKAFDVLL 321

Query: 181 SSVSMVVHCYIKYYKGSKYHLQLIKTIEDGKILCLVFGRDLILYDSKTKQTVAVDDKLQD 240
             +      Y+ + +     LQLI+  +DGKILCL+ G DLILY+SKT++  ++  +  +
Sbjct: 322 PKI------YVHHRRLYDSQLQLIRACDDGKILCLISGLDLILYNSKTQRMESLTYQHLN 373

Query: 241 GTKEKLWIYEIEPFNFGSLRKIL 260
             K    ++ I+ FNF SL KIL
Sbjct: 382 IKK----VHRIDSFNFDSLHKIL 373

BLAST of CaUC10G190450 vs. ExPASy TrEMBL
Match: A0A6J1HBS1 (F-box protein At3g07870-like OS=Cucurbita moschata OX=3662 GN=LOC111462004 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.7e-31
Identity = 99/269 (36.80%), Postives = 147/269 (54.65%), Query Frame = 0

Query: 1   MTNECIQLPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFIAN----IFTF 60
           MTNE  ++P  ++   + +C   YGFGF P  K YK++R + V      + N    IF F
Sbjct: 143 MTNEYFEVPKDEFKGNWLTC--SYGFGFCPKTKHYKVIRNSTVDDRNSIVHNYKSEIFAF 202

Query: 61  GISSSRGKWIS-SVPLLSFYVINGDNDGVYLNGYLYWNGYNEIEDRDTVRNPILLRFDVE 120
           G   +R +W     P  SF+  +    GVYLNG L+W G N++      R  ++ R ++E
Sbjct: 203 G---TRQEWTRIESPSCSFHGCH----GVYLNGGLHWVGQNDL------RRDVIYRLNME 262

Query: 121 DEKFQKVSFPRGGDDGAFFPCSHIHVFNGTLYLSGFDFEGGTFHIWKMERD-SWIKEFVI 180
           DEK++++ FP   DDG +FP  +I VFNG L+L+    E   + IWKM+ D SWIK F +
Sbjct: 263 DEKYEQIPFP--NDDG-YFP--YIRVFNGALHLT-LSMEEYEYRIWKMKEDGSWIKSFSV 322

Query: 181 SLSSVSMVVHCYIKYYKGSKYHLQLIKTIEDGKILCLVFGRDLILYDSKTKQTVAVDDKL 240
            + + +++          SK  ++ IKT +DGKILCL  G  L+LYD KT++     +KL
Sbjct: 323 IIPTKNVL--------SFSKSTVEQIKTGKDGKILCLWAGAQLVLYDPKTEKM----EKL 378

Query: 241 QDGT-KEKLWIYEIEPFNFGSLRKILGVN 263
            D T      ++ I+ FNF +   IL VN
Sbjct: 383 MDDTIVRNFSVHNIDCFNFNAFSDILTVN 378

BLAST of CaUC10G190450 vs. TAIR 10
Match: AT1G50870.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.3e-04
Identity = 40/164 (24.39%), Postives = 69/164 (42.07%), Query Frame = 0

Query: 8   LPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFIANIFTFGISSSRGKW-- 67
           LP  + S +  S  LGY    +P + ++K++ + R   N      + T G  S++ KW  
Sbjct: 157 LPKPEKSWKGLSVFLGY----DPVEGKHKLMCMNR--DNTSDECRVLTLG--SAQEKWRR 216

Query: 68  ----ISSVPLLSFYVINGDNDGVYLNGYLYWNGYNEIEDRDTVRNPILLRFDVEDEKFQK 127
               +    +L +Y       G  +NG +Y+  Y  I+    + NP ++ F+V  EKF  
Sbjct: 217 IKSNLKHRSILRYY-------GQCINGVIYYQAY--IDQMGFISNPTIMSFEVRSEKFDT 276

Query: 128 VSFPRGGDDGAFFPC-SHIHVFNGTLYLSGFDFEGGTFHIWKME 165
           ++ P G       P    +   N T+     D   G   +W +E
Sbjct: 277 ITLPSGSFANMLIPYQGRLACVNNTM-----DDVNGGITLWTLE 298

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN59660.12.1e-5246.90hypothetical protein Csa_001105 [Cucumis sativus][more]
XP_011652871.12.1e-5246.90F-box/kelch-repeat protein At3g06240 [Cucumis sativus][more]
KGN59658.19.1e-4343.79hypothetical protein Csa_001357 [Cucumis sativus][more]
XP_038880514.16.1e-3942.80putative F-box protein At1g46984 [Benincasa hispida][more]
XP_004135796.12.2e-3343.39putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical prot... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LCB81.0e-5246.90F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G836440 PE=4 ... [more]
A0A0A0LCZ34.4e-4343.79F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G836430 PE=4 ... [more]
A0A0A0M1M51.1e-3343.39F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 ... [more]
A0A6J1CQE22.0e-3236.50F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC1... [more]
A0A6J1HBS11.7e-3136.80F-box protein At3g07870-like OS=Cucurbita moschata OX=3662 GN=LOC111462004 PE=4 ... [more]
Match NameE-valueIdentityDescription
AT1G50870.12.3e-0424.39F-box and associated interaction domains-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017451F-box associated interaction domainTIGRFAMTIGR01640TIGR01640coord: 4..201
e-value: 2.6E-17
score: 60.9
IPR013187F-box associated domain, type 3PFAMPF08268FBA_3coord: 83..185
e-value: 1.0E-5
score: 25.5
NoneNo IPR availablePANTHERPTHR47993:SF20F-BOX FAMILY PROTEINcoord: 1..196
NoneNo IPR availablePANTHERPTHR47993OS09G0372900 PROTEIN-RELATEDcoord: 1..196
IPR011043Galactose oxidase/kelch, beta-propellerSUPERFAMILY50965Galactose oxidase, central domaincoord: 73..225

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC10G190450.1CaUC10G190450.1mRNA