CaUC09G178230 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAATACAAAAATACAAAACATATTCTAAGGCGAAATTCAATTCAACAGCCTGTCTCTCGCCTTCTCGTCGGAGAAGAAGAAATTCTCTCTCTTTCTTTCTCTCTCTCGCCGGAATTATGCTCTCCGATCGATCCTTCTGCAACTACTTCACGATGCTTCTTCTCTTCATCCTCTCACTGCTTTTCGCTTCTTCTTCCTCCACTTCCATTTCAGGTACTTTAGATTCACATTCTCAAATTTACCTCTCTTTCTTCTTCTCATTCTCCTCCTCCTTCTTCTCTATTTCTGTATTTAACTTCACTTTTTATGTTTTCCAGGCGATGTCTTTGAATCGAAGCTTTCAATCGGTCGGAACCTCCTACAGGCTAAAAAAGGTTCCACCCTTTCTCTTCAACATCTTGAGTTTGTTTTTGCTGAGTTCGTAATCTAG CAAAAATACAAAAATACAAAACATATTCTAAGGCGAAATTCAATTCAACAGCCTGTCTCTCGCCTTCTCGTCGGAGAAGAAGAAATTCTCTCTCTTTCTTTCTCTCTCTCGCCGGAATTATGCTCTCCGATCGATCCTTCTGCAACTACTTCACGATGCTTCTTCTCTTCATCCTCTCACTGCTTTTCGCTTCTTCTTCCTCCACTTCCATTTCAGGCGATGTCTTTGAATCGAAGCTTTCAATCGGTCGGAACCTCCTACAGGCTAAAAAAGGTTCCACCCTTTCTCTTCAACATCTTGAGTTTGTTTTTGCTGAGTTCGTAATCTAG ATGCTCTCCGATCGATCCTTCTGCAACTACTTCACGATGCTTCTTCTCTTCATCCTCTCACTGCTTTTCGCTTCTTCTTCCTCCACTTCCATTTCAGGCGATGTCTTTGAATCGAAGCTTTCAATCGGTCGGAACCTCCTACAGGCTAAAAAAGGTTCCACCCTTTCTCTTCAACATCTTGAGTTTGTTTTTGCTGAGTTCGTAATCTAG MLSDRSFCNYFTMLLLFILSLLFASSSSTSISGDVFESKLSIGRNLLQAKKGSTLSLQHLEFVFAEFVI Homology
BLAST of CaUC09G178230 vs. NCBI nr
Match: XP_038896951.1 (GPI-anchored protein LLG1-like [Benincasa hispida]) HSP 1 Score: 83.6 bits (205), Expect = 7.5e-13 Identity = 47/62 (75.81%), Postives = 52/62 (83.87%), Query Frame = 0
BLAST of CaUC09G178230 vs. NCBI nr
Match: XP_022936417.1 (GPI-anchored protein LLG1 [Cucurbita moschata]) HSP 1 Score: 77.0 bits (188), Expect = 7.0e-11 Identity = 42/62 (67.74%), Postives = 53/62 (85.48%), Query Frame = 0
BLAST of CaUC09G178230 vs. NCBI nr
Match: KAG6592129.1 (GPI-anchored protein LLG1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 77.0 bits (188), Expect = 7.0e-11 Identity = 42/62 (67.74%), Postives = 53/62 (85.48%), Query Frame = 0
BLAST of CaUC09G178230 vs. NCBI nr
Match: KAG7025004.1 (GPI-anchored protein LLG1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 77.0 bits (188), Expect = 7.0e-11 Identity = 42/62 (67.74%), Postives = 53/62 (85.48%), Query Frame = 0
BLAST of CaUC09G178230 vs. NCBI nr
Match: XP_023536509.1 (GPI-anchored protein LLG1-like [Cucurbita pepo subsp. pepo] >XP_023536510.1 GPI-anchored protein LLG1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 76.3 bits (186), Expect = 1.2e-10 Identity = 41/62 (66.13%), Postives = 53/62 (85.48%), Query Frame = 0
BLAST of CaUC09G178230 vs. ExPASy TrEMBL
Match: A0A6J1F8E1 (GPI-anchored protein LLG1 OS=Cucurbita moschata OX=3662 GN=LOC111443044 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.4e-11 Identity = 42/62 (67.74%), Postives = 53/62 (85.48%), Query Frame = 0
BLAST of CaUC09G178230 vs. ExPASy TrEMBL
Match: A0A6J1IFC4 (GPI-anchored protein LLG1-like OS=Cucurbita maxima OX=3661 GN=LOC111476731 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.2e-10 Identity = 40/62 (64.52%), Postives = 53/62 (85.48%), Query Frame = 0
BLAST of CaUC09G178230 vs. ExPASy TrEMBL
Match: A0A6J1FTS4 (GPI-anchored protein LLG1-like OS=Cucurbita moschata OX=3662 GN=LOC111446763 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.9e-10 Identity = 41/61 (67.21%), Postives = 50/61 (81.97%), Query Frame = 0
BLAST of CaUC09G178230 vs. ExPASy TrEMBL
Match: A0A6J1J2M4 (GPI-anchored protein LLG1-like OS=Cucurbita maxima OX=3661 GN=LOC111480694 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.7e-10 Identity = 41/61 (67.21%), Postives = 49/61 (80.33%), Query Frame = 0
BLAST of CaUC09G178230 vs. ExPASy TrEMBL
Match: A0A6J1CGJ1 (GPI-anchored protein LLG1-like OS=Momordica charantia OX=3673 GN=LOC111010609 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 8.3e-10 Identity = 40/62 (64.52%), Postives = 51/62 (82.26%), Query Frame = 0
BLAST of CaUC09G178230 vs. TAIR 10
Match: AT4G26466.1 (lorelei ) HSP 1 Score: 40.0 bits (92), Expect = 8.8e-04 Identity = 22/51 (43.14%), Postives = 37/51 (72.55%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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