CaUC06G117880 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G117880
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Amino-acid racemase isoform 2
Location	Ciama_Chr06: 22448981 .. 22450953 (+)
RNA-Seq Expression	CaUC06G117880
Synteny	CaUC06G117880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTGTGCTGAAGAAAAAAATAGGTGCTTAGTTAGATTCAGAGTTGAATAACATTGAAACTGTTGCTCTTTACATAAACGATGCTTGATGGAGGTATGGCGATCCCCTTTTATGCGTCGACTTGCCCAGCACCTATTCGACGAAATGCCAATGAGAGCATTACTCGCTTTAGGAGGAGATTAAACCCGTATTCATCTATACAGATTTCCTCTGTTATTCAAACTGATGCAAATGATAACTTACCAGGATCCAAGAAGATATCAAGTTTAGGAAAATCTCTGTCAAAAACTCGAACTCCTAAACCCCTTCTTGTCCAGCCCAATACTGTGGGTGTCATAGGGGGAGTGTCGGTTTTTTCTACTTTACTTTTCTTGGAAAAGCTCGTCTGGTGGAGCTTGAAGGATGGACAAGAGAGCATACCTTTTGTTGTCTGTAGCGATCCAGCATTAGGCAAAGGGATTCCTCCTCTTACTTCATTGTGCACGTTTAGCACAAATTCTTCTCAATATGGTCATAGTGATGCTCCTATCGAGAATTTGAAGCGGAAAAGGGCGTTTCTCGAGCAGTCTGGAGCTCGGTGTCTAATTACCCCATGCCATCTTACACATAGGTGGCTTGATGACACATCTGAGAGCTGCAAATTACCTTTTCTTCATGTGGGAGATTGTGTTGCTAGGGAGCTTAAAGAGGCTAAGCTTAAGCCACTTGAAGGAGGGGGCAGTGTCCGGATCGGGCTGCTTGCAACTGATACAGCAACAGTAACTGGTTTTTATCATGAGAGGCTTCAAAATCAGGTTTTGTAATACATTCTCAGTTAATGGTTCATAACATACTCTAATTTATTGATAAAGAGTGATGCCCAAGCAATAAGAATGACCAATACATTACATAATCTACGTTTCATGCTATATCTGAGCACGCAGAGAAATGAATAATGTTGCATACCTCATAATAAAATGGATGTTGTTGAAGTGATTGAAGGGCATTTTCTCTACACTATTTAGTAAATAATTCCAAAACTTTCTTCTGATTTCCTTTTCTTTCTTCAGGGCTTTGATGTTCTCTTGCCAGACGAAGCAACCATGAAGCATATTGTAATTCCTGCAGTTGAAGCTTTGAATAAAAGGGATAAGGAAGGAGCAAGAAATCTGTTGAGAATTGCTGTTCATGTTCTTTTGATAAGGGCTGTGAATATGGTAATACTTGCTTCTGATGAATTGCTTAATCTTCTTCCTCCTGATGATCCTATTCTGAAAAAATGTATTGACCCAATGGATGCGTTGGCCAGAGCAGCCATTAAATGGTCTAGATCTACAGAAAGTTTACATGAGAAAGCTTAGCCTCTCTTGTTCACTTACTGCATAATTTATGTATTTCTGTATTAGGAAATGGCTCAAAATTAAATGGTCTACTTTTTTTTTTCCTTTGGATGAAATACCACGACCTTAAAATCCGAACAGAGACCACAACATCAAATTCTCATGTCGATCCGCTCAGAGCTAAAAATTCTAATATTGCCACATCGACCTTTAAGATTATGTCTTTTGCCAACAAAATCAGAAACTGCTACATCACCCACACAAGAGCCATCAAGACAAGTTTGACAATCCTACCGAGGAACCCATGGTAAAACCAATATCATCCATGACGAAAACAACCATTCATTAGTTAGTCACAGATACAGATGGTATTCAGAACAAAGTAGATGAATTTGGAACATACATGAGCTTTCATGAGAAAAGGTAGTATGTGAAGAATATTCACCTACACATTGTACAAGGATTCTGCCCCCAAAGAACAGCCATTTGTTTAGATGGAACAATTTGTGAGAGCCCTAGATAGGGACAGATTAGGATTATTAGTAGGATATTAGTAAGGGCATAAGGGTCATTTAGCCCGGAGAGCCTTGGTTATAAATATAGTGTTTAAGGTCTTTAGAGAGGCGTGAAGATTTTGGTAGGAATTTCCATTGT

mRNA sequence

CTCTGTGCTGAAGAAAAAAATAGGTGCTTAGTTAGATTCAGAGTTGAATAACATTGAAACTGTTGCTCTTTACATAAACGATGCTTGATGGAGGTATGGCGATCCCCTTTTATGCGTCGACTTGCCCAGCACCTATTCGACGAAATGCCAATGAGAGCATTACTCGCTTTAGGAGGAGATTAAACCCGTATTCATCTATACAGATTTCCTCTGTTATTCAAACTGATGCAAATGATAACTTACCAGGATCCAAGAAGATATCAAGTTTAGGAAAATCTCTGTCAAAAACTCGAACTCCTAAACCCCTTCTTGTCCAGCCCAATACTGTGGGTGTCATAGGGGGAGTGTCGGTTTTTTCTACTTTACTTTTCTTGGAAAAGCTCGTCTGGTGGAGCTTGAAGGATGGACAAGAGAGCATACCTTTTGTTGTCTGTAGCGATCCAGCATTAGGCAAAGGGATTCCTCCTCTTACTTCATTGTGCACGTTTAGCACAAATTCTTCTCAATATGGTCATAGTGATGCTCCTATCGAGAATTTGAAGCGGAAAAGGGCGTTTCTCGAGCAGTCTGGAGCTCGGTGTCTAATTACCCCATGCCATCTTACACATAGGTGGCTTGATGACACATCTGAGAGCTGCAAATTACCTTTTCTTCATGTGGGAGATTGTGTTGCTAGGGAGCTTAAAGAGGCTAAGCTTAAGCCACTTGAAGGAGGGGGCAGTGTCCGGATCGGGCTGCTTGCAACTGATACAGCAACAGTAACTGGTTTTTATCATGAGAGGCTTCAAAATCAGGGCTTTGATGTTCTCTTGCCAGACGAAGCAACCATGAAGCATATTGTAATTCCTGCAGTTGAAGCTTTGAATAAAAGGGATAAGGAAGGAGCAAGAAATCTGTTGAGAATTGCTGTTCATGTTCTTTTGATAAGGGCTGTGAATATGGTAATACTTGCTTCTGATGAATTGCTTAATCTTCTTCCTCCTGATGATCCTATTCTGAAAAAATGTATTGACCCAATGGATGCGTTGGCCAGAGCAGCCATTAAATGGTCTAGATCTACAGAAAGTTTACATGAGAAAGCTTAGCCTCTCTTGTTCACTTACTGCATAATTTATGTATTTCTGTATTAGGAAATGGCTCAAAATTAAATGGTCTACTTTTTTTTTTCCTTTGGATGAAATACCACGACCTTAAAATCCGAACAGAGACCACAACATCAAATTCTCATGTCGATCCGCTCAGAGCTAAAAATTCTAATATTGCCACATCGACCTTTAAGATTATGTCTTTTGCCAACAAAATCAGAAACTGCTACATCACCCACACAAGAGCCATCAAGACAAGTTTGACAATCCTACCGAGGAACCCATGGTAAAACCAATATCATCCATGACGAAAACAACCATTCATTAGTTAGTCACAGATACAGATGGTATTCAGAACAAAGTAGATGAATTTGGAACATACATGAGCTTTCATGAGAAAAGGTAGTATGTGAAGAATATTCACCTACACATTGTACAAGGATTCTGCCCCCAAAGAACAGCCATTTGTTTAGATGGAACAATTTGTGAGAGCCCTAGATAGGGACAGATTAGGATTATTAGTAGGATATTAGTAAGGGCATAAGGGTCATTTAGCCCGGAGAGCCTTGGTTATAAATATAGTGTTTAAGGTCTTTAGAGAGGCGTGAAGATTTTGGTAGGAATTTCCATTGT

Coding sequence (CDS)

ATGCTTGATGGAGGTATGGCGATCCCCTTTTATGCGTCGACTTGCCCAGCACCTATTCGACGAAATGCCAATGAGAGCATTACTCGCTTTAGGAGGAGATTAAACCCGTATTCATCTATACAGATTTCCTCTGTTATTCAAACTGATGCAAATGATAACTTACCAGGATCCAAGAAGATATCAAGTTTAGGAAAATCTCTGTCAAAAACTCGAACTCCTAAACCCCTTCTTGTCCAGCCCAATACTGTGGGTGTCATAGGGGGAGTGTCGGTTTTTTCTACTTTACTTTTCTTGGAAAAGCTCGTCTGGTGGAGCTTGAAGGATGGACAAGAGAGCATACCTTTTGTTGTCTGTAGCGATCCAGCATTAGGCAAAGGGATTCCTCCTCTTACTTCATTGTGCACGTTTAGCACAAATTCTTCTCAATATGGTCATAGTGATGCTCCTATCGAGAATTTGAAGCGGAAAAGGGCGTTTCTCGAGCAGTCTGGAGCTCGGTGTCTAATTACCCCATGCCATCTTACACATAGGTGGCTTGATGACACATCTGAGAGCTGCAAATTACCTTTTCTTCATGTGGGAGATTGTGTTGCTAGGGAGCTTAAAGAGGCTAAGCTTAAGCCACTTGAAGGAGGGGGCAGTGTCCGGATCGGGCTGCTTGCAACTGATACAGCAACAGTAACTGGTTTTTATCATGAGAGGCTTCAAAATCAGGGCTTTGATGTTCTCTTGCCAGACGAAGCAACCATGAAGCATATTGTAATTCCTGCAGTTGAAGCTTTGAATAAAAGGGATAAGGAAGGAGCAAGAAATCTGTTGAGAATTGCTGTTCATGTTCTTTTGATAAGGGCTGTGAATATGGTAATACTTGCTTCTGATGAATTGCTTAATCTTCTTCCTCCTGATGATCCTATTCTGAAAAAATGTATTGACCCAATGGATGCGTTGGCCAGAGCAGCCATTAAATGGTCTAGATCTACAGAAAGTTTACATGAGAAAGCTTAG

Protein sequence

MLDGGMAIPFYASTCPAPIRRNANESITRFRRRLNPYSSIQISSVIQTDANDNLPGSKKISSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSDPALGKGIPPLTSLCTFSTNSSQYGHSDAPIENLKRKRAFLEQSGARCLITPCHLTHRWLDDTSESCKLPFLHVGDCVARELKEAKLKPLEGGGSVRIGLLATDTATVTGFYHERLQNQGFDVLLPDEATMKHIVIPAVEALNKRDKEGARNLLRIAVHVLLIRAVNMVILASDELLNLLPPDDPILKKCIDPMDALARAAIKWSRSTESLHEKA

Homology

[Close]

BLAST of CaUC06G117880 vs. NCBI nr
Match: XP_038878952.1 (uncharacterized protein LOC120071036 [Benincasa hispida])

HSP 1 Score: 632.1 bits (1629), Expect = 2.7e-177
Identity = 315/335 (94.03%), Postives = 322/335 (96.12%), Query Frame = 0


Query: 1   MLDGGMAIPFYASTCPAPIRRNANESITRFRRRLNPYSSIQISSVIQTDANDNLPGSKKI 60
           MLDGGM   FYA TCPAPIRRNANE ITRFRRR+NPYSS+QISSVIQTDANDNLPGSKKI
Sbjct: 1   MLDGGMTTSFYALTCPAPIRRNANEGITRFRRRINPYSSVQISSVIQTDANDNLPGSKKI 60

Query: 61  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSD 120
           SS GKSLSKTRTPKPLLVQP TVGVIGGVSVFSTLLFLEKLVWWS+KDGQESIPFVVCSD
Sbjct: 61  SSSGKSLSKTRTPKPLLVQPKTVGVIGGVSVFSTLLFLEKLVWWSMKDGQESIPFVVCSD 120

Query: 121 PALGKGIPPLTSLCTFSTNSSQYGHSDAP-IENLKRKRAFLEQSGARCLITPCHLTHRWL 180
           PALGKGIPPLTS CTFSTNSSQYGHSD P IENLKRKRAFLEQSGARCLITPCHLTHRWL
Sbjct: 121 PALGKGIPPLTSSCTFSTNSSQYGHSDDPIIENLKRKRAFLEQSGARCLITPCHLTHRWL 180

Query: 181 DDTSESCKLPFLHVGDCVARELKEAKLKPLEGGGSVRIGLLATDTATVTGFYHERLQNQG 240
            DTSESCKLPFLHVGDCVARELKEAKLKPLEGG SVRIGLLATDTATV GFYHERLQNQG
Sbjct: 181 GDTSESCKLPFLHVGDCVARELKEAKLKPLEGGSSVRIGLLATDTATVAGFYHERLQNQG 240

Query: 241 FDVLLPDEATMKHIVIPAVEALNKRDKEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 300
           FD+LLPDEATM+HIVIPAVEALNKRD+EGARNLLRIAVHVLLIRAVNMVILASDELLNLL
Sbjct: 241 FDILLPDEATMEHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 300

Query: 301 PPDDPILKKCIDPMDALARAAIKWSRSTESLHEKA 335
           PPDDPILKKCIDPMDALARAAIKWSRSTE+LHEKA
Sbjct: 301 PPDDPILKKCIDPMDALARAAIKWSRSTENLHEKA 335

[Close]

BLAST of CaUC06G117880 vs. NCBI nr
Match: XP_008465022.1 (PREDICTED: uncharacterized protein LOC103502741 isoform X1 [Cucumis melo] >KAA0046756.1 Amino-acid racemase isoform 2 [Cucumis melo var. makuwa])

HSP 1 Score: 603.6 bits (1555), Expect = 1.0e-168
Identity = 304/331 (91.84%), Postives = 316/331 (95.47%), Query Frame = 0


Query: 1   MLDGGMAIPFYASTCPAPIRRNANESITRFRRRLNPYSSIQISSVIQTDANDNLPGSKKI 60
           ML GGMA+ FYA  CPAP+RRNANE ITRFRRR+N YSS+QISSV+QTDANDNLP SKKI
Sbjct: 2   MLHGGMAMHFYAPICPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKKI 61

Query: 61  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSD 120
           SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS+
Sbjct: 62  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSE 121

Query: 121 PALGKGIPPLTSLCTFSTNSSQYGHSDAP-IENLKRKRAFLEQSGARCLITPCHLTHRWL 180
           PALGKGIPP+TSLCTFST+SSQYGHSDAP IENL RKRAFLE SGARCLITPCHLTHRWL
Sbjct: 122 PALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRWL 181

Query: 181 DDTSESCKLPFLHVGDCVARELKEAKLKPLEGGGSVRIGLLATDTATVTGFYHERLQNQG 240
            DTSESCKLPFLHVGDCVARELKEA LKPLEGG +VRIGLLATDT TVTG Y+ERLQNQG
Sbjct: 182 SDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDT-TVTGIYYERLQNQG 241

Query: 241 FDVLLPDEATMKHIVIPAVEALNKRDKEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 300
           FDVLLPDEATMKHIVIPAVEALNKRD+EGARNLLRIAVHVLLIRAVNMVILASDELLNLL
Sbjct: 242 FDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 301

Query: 301 PPDDPILKKCIDPMDALARAAIKWSRSTESL 331
           PPDDPILKKCIDPMDALARAAIKWSRSTE+L
Sbjct: 302 PPDDPILKKCIDPMDALARAAIKWSRSTENL 331

[Close]

BLAST of CaUC06G117880 vs. NCBI nr
Match: TYK29691.1 (Amino-acid racemase isoform 2 [Cucumis melo var. makuwa])

HSP 1 Score: 599.4 bits (1544), Expect = 2.0e-167
Identity = 303/331 (91.54%), Postives = 315/331 (95.17%), Query Frame = 0


Query: 1   MLDGGMAIPFYASTCPAPIRRNANESITRFRRRLNPYSSIQISSVIQTDANDNLPGSKKI 60
           ML GGMA+ FYA   PAP+RRNANE ITRFRRR+N YSS+QISSV+QTDANDNLP SKKI
Sbjct: 2   MLHGGMAMHFYAPIFPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKKI 61

Query: 61  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSD 120
           SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS+
Sbjct: 62  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSE 121

Query: 121 PALGKGIPPLTSLCTFSTNSSQYGHSDAP-IENLKRKRAFLEQSGARCLITPCHLTHRWL 180
           PALGKGIPP+TSLCTFST+SSQYGHSDAP IENL RKRAFLE SGARCLITPCHLTHRWL
Sbjct: 122 PALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRWL 181

Query: 181 DDTSESCKLPFLHVGDCVARELKEAKLKPLEGGGSVRIGLLATDTATVTGFYHERLQNQG 240
            DTSESCKLPFLHVGDCVARELKEA LKPLEGG +VRIGLLATDT TVTG Y+ERLQNQG
Sbjct: 182 SDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDT-TVTGIYYERLQNQG 241

Query: 241 FDVLLPDEATMKHIVIPAVEALNKRDKEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 300
           FDVLLPDEATMKHIVIPAVEALNKRD+EGARNLLRIAVHVLLIRAVNMVILASDELLNLL
Sbjct: 242 FDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 301

Query: 301 PPDDPILKKCIDPMDALARAAIKWSRSTESL 331
           PPDDPILKKCIDPMDALARAAIKWSRSTE+L
Sbjct: 302 PPDDPILKKCIDPMDALARAAIKWSRSTENL 331

[Close]

BLAST of CaUC06G117880 vs. NCBI nr
Match: XP_023006388.1 (uncharacterized protein LOC111499133 isoform X1 [Cucurbita maxima])

HSP 1 Score: 574.3 bits (1479), Expect = 6.7e-160
Identity = 288/335 (85.97%), Postives = 308/335 (91.94%), Query Frame = 0


Query: 1   MLDGGMAIPFYASTCPAPIRRNANESITRFRRRLNPYSSIQISSVIQTDANDNLPGSKKI 60
           MLDGGMA+PFYA  CPAP+RRNANESITRFRRRLNPYSS+QI SV+QTD NDNLP SKKI
Sbjct: 1   MLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKI 60

Query: 61  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSD 120
           SS GKS+SK R PKPLLVQPNTVGVIGGVSV STLLFLEKLVWWSLKDGQ+SIPFVVCSD
Sbjct: 61  SSAGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSD 120

Query: 121 PALGKGIPPLTSLCTFSTNSSQYGHSDAP-IENLKRKRAFLEQSGARCLITPCHLTHRWL 180
           PALGKGIPPLTSL TF+ NSSQ+  +DAP IE LK+K  FLEQSGARCLITPCHL+HRWL
Sbjct: 121 PALGKGIPPLTSLTTFTANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWL 180

Query: 181 DDTSESCKLPFLHVGDCVARELKEAKLKPLEGGGSVRIGLLATDTATVTGFYHERLQNQG 240
            DT  SCKLPFLHVGDCVA ELKEAKLKPLE G SVRIGLLATD A VTGFY ERLQNQG
Sbjct: 181 GDT--SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQG 240

Query: 241 FDVLLPDEATMKHIVIPAVEALNKRDKEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 300
           F+V+LPDEAT+KHI++PAVEALNKRD+EGARNLLRIAVH+LLIRAVN+VILASDELLNLL
Sbjct: 241 FEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLL 300

Query: 301 PPDDPILKKCIDPMDALARAAIKWSRSTESLHEKA 335
           PPDDPILKKCIDPMDALARAAIKWSRST +LHEKA
Sbjct: 301 PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 333

[Close]

BLAST of CaUC06G117880 vs. NCBI nr
Match: XP_022931647.1 (uncharacterized protein LOC111437803 isoform X1 [Cucurbita moschata])

HSP 1 Score: 572.0 bits (1473), Expect = 3.3e-159
Identity = 287/335 (85.67%), Postives = 307/335 (91.64%), Query Frame = 0


Query: 1   MLDGGMAIPFYASTCPAPIRRNANESITRFRRRLNPYSSIQISSVIQTDANDNLPGSKKI 60
           MLDGGMA+PFYA  CPAP+RRNANESITRFRRRLNPYSS+QI SV+QTD NDNLP SKKI
Sbjct: 1   MLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKI 60

Query: 61  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSD 120
           S+ GKS+SK R PKPLLVQPNTVGVIGGVSV STLLFLEKLVWWSLKDGQ+SIPFVVCSD
Sbjct: 61  STPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSD 120

Query: 121 PALGKGIPPLTSLCTFSTNSSQYGHSDAP-IENLKRKRAFLEQSGARCLITPCHLTHRWL 180
           PALGKGIPPLTSL TF  NSSQ+  +DAP IE LK+K  FLEQSGARCLITPCHL+HRWL
Sbjct: 121 PALGKGIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWL 180

Query: 181 DDTSESCKLPFLHVGDCVARELKEAKLKPLEGGGSVRIGLLATDTATVTGFYHERLQNQG 240
            DT  SCKLPFLHVGDCVA ELKEAKLKPLE G SVRIGLLATD A VTGFY ERLQNQG
Sbjct: 181 SDT--SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQG 240

Query: 241 FDVLLPDEATMKHIVIPAVEALNKRDKEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 300
           F+V+LPDEAT+KHI++PAVEALNKRD+EGARNLLRIAVH+LLIRAVN+VILASDELLNLL
Sbjct: 241 FEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLL 300

Query: 301 PPDDPILKKCIDPMDALARAAIKWSRSTESLHEKA 335
           PPDDPILKKCIDPMDALARAAIKWSRST +LHEKA
Sbjct: 301 PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 333

[Close]

BLAST of CaUC06G117880 vs. ExPASy TrEMBL
Match: A0A5A7TXR8 (Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00390 PE=4 SV=1)

HSP 1 Score: 603.6 bits (1555), Expect = 5.0e-169
Identity = 304/331 (91.84%), Postives = 316/331 (95.47%), Query Frame = 0


Query: 1   MLDGGMAIPFYASTCPAPIRRNANESITRFRRRLNPYSSIQISSVIQTDANDNLPGSKKI 60
           ML GGMA+ FYA  CPAP+RRNANE ITRFRRR+N YSS+QISSV+QTDANDNLP SKKI
Sbjct: 2   MLHGGMAMHFYAPICPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKKI 61

Query: 61  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSD 120
           SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS+
Sbjct: 62  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSE 121

Query: 121 PALGKGIPPLTSLCTFSTNSSQYGHSDAP-IENLKRKRAFLEQSGARCLITPCHLTHRWL 180
           PALGKGIPP+TSLCTFST+SSQYGHSDAP IENL RKRAFLE SGARCLITPCHLTHRWL
Sbjct: 122 PALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRWL 181

Query: 181 DDTSESCKLPFLHVGDCVARELKEAKLKPLEGGGSVRIGLLATDTATVTGFYHERLQNQG 240
            DTSESCKLPFLHVGDCVARELKEA LKPLEGG +VRIGLLATDT TVTG Y+ERLQNQG
Sbjct: 182 SDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDT-TVTGIYYERLQNQG 241

Query: 241 FDVLLPDEATMKHIVIPAVEALNKRDKEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 300
           FDVLLPDEATMKHIVIPAVEALNKRD+EGARNLLRIAVHVLLIRAVNMVILASDELLNLL
Sbjct: 242 FDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 301

Query: 301 PPDDPILKKCIDPMDALARAAIKWSRSTESL 331
           PPDDPILKKCIDPMDALARAAIKWSRSTE+L
Sbjct: 302 PPDDPILKKCIDPMDALARAAIKWSRSTENL 331

[Close]

BLAST of CaUC06G117880 vs. ExPASy TrEMBL
Match: A0A1S3CMU2 (uncharacterized protein LOC103502741 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502741 PE=4 SV=1)

HSP 1 Score: 603.6 bits (1555), Expect = 5.0e-169
Identity = 304/331 (91.84%), Postives = 316/331 (95.47%), Query Frame = 0


Query: 1   MLDGGMAIPFYASTCPAPIRRNANESITRFRRRLNPYSSIQISSVIQTDANDNLPGSKKI 60
           ML GGMA+ FYA  CPAP+RRNANE ITRFRRR+N YSS+QISSV+QTDANDNLP SKKI
Sbjct: 2   MLHGGMAMHFYAPICPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKKI 61

Query: 61  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSD 120
           SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS+
Sbjct: 62  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSE 121

Query: 121 PALGKGIPPLTSLCTFSTNSSQYGHSDAP-IENLKRKRAFLEQSGARCLITPCHLTHRWL 180
           PALGKGIPP+TSLCTFST+SSQYGHSDAP IENL RKRAFLE SGARCLITPCHLTHRWL
Sbjct: 122 PALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRWL 181

Query: 181 DDTSESCKLPFLHVGDCVARELKEAKLKPLEGGGSVRIGLLATDTATVTGFYHERLQNQG 240
            DTSESCKLPFLHVGDCVARELKEA LKPLEGG +VRIGLLATDT TVTG Y+ERLQNQG
Sbjct: 182 SDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDT-TVTGIYYERLQNQG 241

Query: 241 FDVLLPDEATMKHIVIPAVEALNKRDKEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 300
           FDVLLPDEATMKHIVIPAVEALNKRD+EGARNLLRIAVHVLLIRAVNMVILASDELLNLL
Sbjct: 242 FDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 301

Query: 301 PPDDPILKKCIDPMDALARAAIKWSRSTESL 331
           PPDDPILKKCIDPMDALARAAIKWSRSTE+L
Sbjct: 302 PPDDPILKKCIDPMDALARAAIKWSRSTENL 331

[Close]

BLAST of CaUC06G117880 vs. ExPASy TrEMBL
Match: A0A5D3E266 (Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00430 PE=4 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 9.5e-168
Identity = 303/331 (91.54%), Postives = 315/331 (95.17%), Query Frame = 0


Query: 1   MLDGGMAIPFYASTCPAPIRRNANESITRFRRRLNPYSSIQISSVIQTDANDNLPGSKKI 60
           ML GGMA+ FYA   PAP+RRNANE ITRFRRR+N YSS+QISSV+QTDANDNLP SKKI
Sbjct: 2   MLHGGMAMHFYAPIFPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKKI 61

Query: 61  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSD 120
           SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS+
Sbjct: 62  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSE 121

Query: 121 PALGKGIPPLTSLCTFSTNSSQYGHSDAP-IENLKRKRAFLEQSGARCLITPCHLTHRWL 180
           PALGKGIPP+TSLCTFST+SSQYGHSDAP IENL RKRAFLE SGARCLITPCHLTHRWL
Sbjct: 122 PALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRWL 181

Query: 181 DDTSESCKLPFLHVGDCVARELKEAKLKPLEGGGSVRIGLLATDTATVTGFYHERLQNQG 240
            DTSESCKLPFLHVGDCVARELKEA LKPLEGG +VRIGLLATDT TVTG Y+ERLQNQG
Sbjct: 182 SDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDT-TVTGIYYERLQNQG 241

Query: 241 FDVLLPDEATMKHIVIPAVEALNKRDKEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 300
           FDVLLPDEATMKHIVIPAVEALNKRD+EGARNLLRIAVHVLLIRAVNMVILASDELLNLL
Sbjct: 242 FDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 301

Query: 301 PPDDPILKKCIDPMDALARAAIKWSRSTESL 331
           PPDDPILKKCIDPMDALARAAIKWSRSTE+L
Sbjct: 302 PPDDPILKKCIDPMDALARAAIKWSRSTENL 331

[Close]

BLAST of CaUC06G117880 vs. ExPASy TrEMBL
Match: A0A6J1L4S4 (uncharacterized protein LOC111499133 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499133 PE=4 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 3.3e-160
Identity = 288/335 (85.97%), Postives = 308/335 (91.94%), Query Frame = 0


Query: 1   MLDGGMAIPFYASTCPAPIRRNANESITRFRRRLNPYSSIQISSVIQTDANDNLPGSKKI 60
           MLDGGMA+PFYA  CPAP+RRNANESITRFRRRLNPYSS+QI SV+QTD NDNLP SKKI
Sbjct: 1   MLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKI 60

Query: 61  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSD 120
           SS GKS+SK R PKPLLVQPNTVGVIGGVSV STLLFLEKLVWWSLKDGQ+SIPFVVCSD
Sbjct: 61  SSAGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSD 120

Query: 121 PALGKGIPPLTSLCTFSTNSSQYGHSDAP-IENLKRKRAFLEQSGARCLITPCHLTHRWL 180
           PALGKGIPPLTSL TF+ NSSQ+  +DAP IE LK+K  FLEQSGARCLITPCHL+HRWL
Sbjct: 121 PALGKGIPPLTSLTTFTANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWL 180

Query: 181 DDTSESCKLPFLHVGDCVARELKEAKLKPLEGGGSVRIGLLATDTATVTGFYHERLQNQG 240
            DT  SCKLPFLHVGDCVA ELKEAKLKPLE G SVRIGLLATD A VTGFY ERLQNQG
Sbjct: 181 GDT--SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQG 240

Query: 241 FDVLLPDEATMKHIVIPAVEALNKRDKEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 300
           F+V+LPDEAT+KHI++PAVEALNKRD+EGARNLLRIAVH+LLIRAVN+VILASDELLNLL
Sbjct: 241 FEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLL 300

Query: 301 PPDDPILKKCIDPMDALARAAIKWSRSTESLHEKA 335
           PPDDPILKKCIDPMDALARAAIKWSRST +LHEKA
Sbjct: 301 PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 333

[Close]

BLAST of CaUC06G117880 vs. ExPASy TrEMBL
Match: A0A6J1EU92 (uncharacterized protein LOC111437803 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437803 PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.6e-159
Identity = 287/335 (85.67%), Postives = 307/335 (91.64%), Query Frame = 0


Query: 1   MLDGGMAIPFYASTCPAPIRRNANESITRFRRRLNPYSSIQISSVIQTDANDNLPGSKKI 60
           MLDGGMA+PFYA  CPAP+RRNANESITRFRRRLNPYSS+QI SV+QTD NDNLP SKKI
Sbjct: 1   MLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKI 60

Query: 61  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSD 120
           S+ GKS+SK R PKPLLVQPNTVGVIGGVSV STLLFLEKLVWWSLKDGQ+SIPFVVCSD
Sbjct: 61  STPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSD 120

Query: 121 PALGKGIPPLTSLCTFSTNSSQYGHSDAP-IENLKRKRAFLEQSGARCLITPCHLTHRWL 180
           PALGKGIPPLTSL TF  NSSQ+  +DAP IE LK+K  FLEQSGARCLITPCHL+HRWL
Sbjct: 121 PALGKGIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWL 180

Query: 181 DDTSESCKLPFLHVGDCVARELKEAKLKPLEGGGSVRIGLLATDTATVTGFYHERLQNQG 240
            DT  SCKLPFLHVGDCVA ELKEAKLKPLE G SVRIGLLATD A VTGFY ERLQNQG
Sbjct: 181 SDT--SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQG 240

Query: 241 FDVLLPDEATMKHIVIPAVEALNKRDKEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 300
           F+V+LPDEAT+KHI++PAVEALNKRD+EGARNLLRIAVH+LLIRAVN+VILASDELLNLL
Sbjct: 241 FEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLL 300

Query: 301 PPDDPILKKCIDPMDALARAAIKWSRSTESLHEKA 335
           PPDDPILKKCIDPMDALARAAIKWSRST +LHEKA
Sbjct: 301 PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 333

[Close]

BLAST of CaUC06G117880 vs. TAIR 10
Match: AT1G15410.1 (aspartate-glutamate racemase family )

HSP 1 Score: 293.1 bits (749), Expect = 2.8e-79
Identity = 151/309 (48.87%), Postives = 213/309 (68.93%), Query Frame = 0


Query: 31  RRRLNPYSSIQISSV-IQTDANDNLPGSKKISSLGKSLSKTRTPKP---LLVQPNTVGVI 90
           R RL+   ++  SSV +  D +++LP  KK   L +    +    P   LL Q NTVG+I
Sbjct: 25  RVRLSRVLAMPPSSVLLHMDESNDLPKPKKGFCLSEDSRNSLNSLPADSLLRQANTVGII 84

Query: 91  GGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSDPALGKGIPPLTSLCTFSTNS--SQYG 150
           GGVS  STL F++KLV WS  DG+ S+PFV+CSDPAL K       L  +  NS  S Y 
Sbjct: 85  GGVSTDSTLKFVKKLVDWSSNDGKSSLPFVLCSDPALNK------ELLLYEENSYPSLYH 144

Query: 151 HSDAP-------IENLKRKRAFLEQSGARCLITPCHLTHRWLDDTSESCKLPFLHVGDCV 210
             ++        +ENL+ KR +LE+ GA+ ++ PCH+ H W ++  E   +P LH+G+C+
Sbjct: 145 REESTPVDPKLIVENLRNKRRYLERCGAKLILMPCHIAHIWYEEVCEGSLVPLLHMGECI 204

Query: 211 ARELKEAKLKPLEGGGSVRIGLLATDTATVTGFYHERLQNQGFDVLLPDEATMKHIVIPA 270
           A+EL+EAK+KPLE G  +R+G++AT      GFY E+LQ+ GF+ +LPD+ATM+H VIP+
Sbjct: 205 AKELQEAKMKPLEAGNPLRVGVMATSATLSAGFYQEKLQSNGFEAVLPDKATMEHTVIPS 264

Query: 271 VEALNKRDKEGARNLLRIAVHVLLIRAVNMVILASDELLNLLPPDDPILKKCIDPMDALA 327
           +EA+ ++D EGARNLLRIA+ VLL++AVN+V+L SDE+ +LLP DDP+LKKC+DPMDALA
Sbjct: 265 IEAMKRKDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLLPGDDPLLKKCVDPMDALA 324

The following BLAST results are available for this feature:

BLAST of CaUC06G117880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878952.1	2.7e-177	94.03	uncharacterized protein LOC120071036 [Benincasa hispida]	[more]
XP_008465022.1	1.0e-168	91.84	PREDICTED: uncharacterized protein LOC103502741 isoform X1 [Cucumis melo] >KAA00...	[more]
TYK29691.1	2.0e-167	91.54	Amino-acid racemase isoform 2 [Cucumis melo var. makuwa]	[more]
XP_023006388.1	6.7e-160	85.97	uncharacterized protein LOC111499133 isoform X1 [Cucurbita maxima]	[more]
XP_022931647.1	3.3e-159	85.67	uncharacterized protein LOC111437803 isoform X1 [Cucurbita moschata]	[more]

BLAST of CaUC06G117880 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC06G117880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TXR8	5.0e-169	91.84	Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3CMU2	5.0e-169	91.84	uncharacterized protein LOC103502741 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3E266	9.5e-168	91.54	Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1L4S4	3.3e-160	85.97	uncharacterized protein LOC111499133 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EU92	1.6e-159	85.67	uncharacterized protein LOC111437803 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CaUC06G117880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15410.1	2.8e-79	48.87	aspartate-glutamate racemase family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.1860		coord: 82..318 e-value: 5.1E-43 score: 149.4
None	No IPR available	GENE3D	3.40.50.1860		coord: 195..312 e-value: 5.1E-43 score: 149.4
None	No IPR available	PANTHER	PTHR21198	GLUTAMATE RACEMASE	coord: 1..332
None	No IPR available	PANTHER	PTHR21198:SF9	ASPARTATE RACEMASE	coord: 1..332
IPR015942	Asp/Glu/hydantoin racemase	PFAM	PF01177	Asp_Glu_race	coord: 86..320 e-value: 3.5E-22 score: 79.3
IPR001920	Asp/Glu racemase	SUPERFAMILY	53681	Aspartate/glutamate racemase	coord: 82..203
IPR001920	Asp/Glu racemase	SUPERFAMILY	53681	Aspartate/glutamate racemase	coord: 216..323

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G117880.1	CaUC06G117880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006807	nitrogen compound metabolic process
molecular_function	GO:0036361	racemase activity, acting on amino acids and derivatives
molecular_function	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives