CaUC04G067280 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCAATCTTTTTTTAGCGGTTTCCCCAGAGATCTTTATCATTAATGCAACTTTCATTTTGCTCATTCATGGAGTTGTATTTAGTACCTCTAAGAAATATGATTATCCACCGTTAGTCAGTAATGTGGGTTGGCTTGGATTACTTAGTGTTGCGCGCCTAGGAGGGCAGCGCGCTTTGGGATGCGGAGGAGCTATTATCGCCCAACTCCCTAACCTAATGCGGCACCGGGTTCGGGCCGCAGGGAACCGTAGCATGGGGGGACGTCTAATCCTTTTGCCGCCGCAAGGCTGGCTAATCGTACGCAGCAGGCTCGAAGACCCCTGGTTCTGGAAGGCACATGAGTCCGAACGCTATGTTGAATGTGCGACCGACACTACACTACGTAGGTACCTGTGCAGGTGAGGCGTCGGTCGGTCCTAGAAACGGCGGCAGCGGCGCGAGGAGTTAACGACCGGACGTGCTGCAACCTAGGGATCACCAGGCAGCTCTTTCGCTCTATAGGGATCGGGGGGGCATAGCACAATTCTTCTTGGAGGAGGGTTGGTTTGCCCGGGTGACTGATCCTGCCATAATGTACTCCTACCTATAG ATGTTCAATCTTTTTTTAGCGGTTTCCCCAGAGATCTTTATCATTAATGCAACTTTCATTTTGCTCATTCATGGAGTTGTATTTAGTACCTCTAAGAAATATGATTATCCACCGTTAGTCAGTAATGTGGGTTGGCTTGGATTACTTAGTGTTGCGCGCCTAGGAGGGCAGCGCGCTTTGGGATGCGGAGGAGCTATTATCGCCCAACTCCCTAACCTAATGCGGCACCGGGTTCGGGCCGCAGGGAACCGTAGCATGGGGGGACGTCTAATCCTTTTGCCGCCGCAAGGCTGGCTAATCGTACGCAGCAGGCTCGAAGACCCCTGGTTCTGGAAGGCACATGAGTCCGAACGCTATGTTGAATGTGCGACCGACACTACACTACGTAGGGATCACCAGGCAGCTCTTTCGCTCTATAGGGATCGGGGGGGCATAGCACAATTCTTCTTGGAGGAGGGTTGGTTTGCCCGGGTGACTGATCCTGCCATAATGTACTCCTACCTATAG ATGTTCAATCTTTTTTTAGCGGTTTCCCCAGAGATCTTTATCATTAATGCAACTTTCATTTTGCTCATTCATGGAGTTGTATTTAGTACCTCTAAGAAATATGATTATCCACCGTTAGTCAGTAATGTGGGTTGGCTTGGATTACTTAGTGTTGCGCGCCTAGGAGGGCAGCGCGCTTTGGGATGCGGAGGAGCTATTATCGCCCAACTCCCTAACCTAATGCGGCACCGGGTTCGGGCCGCAGGGAACCGTAGCATGGGGGGACGTCTAATCCTTTTGCCGCCGCAAGGCTGGCTAATCGTACGCAGCAGGCTCGAAGACCCCTGGTTCTGGAAGGCACATGAGTCCGAACGCTATGTTGAATGTGCGACCGACACTACACTACGTAGGGATCACCAGGCAGCTCTTTCGCTCTATAGGGATCGGGGGGGCATAGCACAATTCTTCTTGGAGGAGGGTTGGTTTGCCCGGGTGACTGATCCTGCCATAATGTACTCCTACCTATAG MFNLFLAVSPEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTLRRDHQAALSLYRDRGGIAQFFLEEGWFARVTDPAIMYSYL Homology
BLAST of CaUC04G067280 vs. NCBI nr
Match: GAU19245.1 (hypothetical protein TSUD_199260 [Trifolium subterraneum]) HSP 1 Score: 276.2 bits (705), Expect = 1.9e-70 Identity = 147/179 (82.12%), Postives = 148/179 (82.68%), Query Frame = 0
BLAST of CaUC04G067280 vs. NCBI nr
Match: PKI40731.1 (hypothetical protein CRG98_038869 [Punica granatum]) HSP 1 Score: 264.6 bits (675), Expect = 5.7e-67 Identity = 129/130 (99.23%), Postives = 129/130 (99.23%), Query Frame = 0
BLAST of CaUC04G067280 vs. NCBI nr
Match: YP_004222261.1 (hypothetical protein BevumaM_p022 [Beta vulgaris subsp. maritima] >YP_004842068.1 hypothetical protein BemaM_p020 [Beta macrocarpa] >CBJ20676.1 hypothetical protein [Beta vulgaris subsp. maritima] >CBL52058.1 hypothetical protein [Beta vulgaris subsp. maritima] >CBX24872.1 hypothetical protein [Beta macrocarpa] >CBX33237.1 hypothetical protein [Beta vulgaris subsp. maritima] >CBX33289.1 hypothetical protein [Beta vulgaris subsp. maritima]) HSP 1 Score: 260.4 bits (664), Expect = 1.1e-65 Identity = 126/130 (96.92%), Postives = 128/130 (98.46%), Query Frame = 0
BLAST of CaUC04G067280 vs. NCBI nr
Match: TYK27103.1 (hypothetical protein E5676_scaffold77438G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 255.8 bits (652), Expect = 2.7e-64 Identity = 126/130 (96.92%), Postives = 127/130 (97.69%), Query Frame = 0
BLAST of CaUC04G067280 vs. NCBI nr
Match: KAA0060785.1 (hypothetical protein E6C27_scaffold43479G00020 [Cucumis melo var. makuwa]) HSP 1 Score: 255.8 bits (652), Expect = 2.7e-64 Identity = 126/130 (96.92%), Postives = 127/130 (97.69%), Query Frame = 0
BLAST of CaUC04G067280 vs. ExPASy Swiss-Prot
Match: O05000 (NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis thaliana OX=3702 GN=ND2 PE=1 SV=2) HSP 1 Score: 98.6 bits (244), Expect = 7.1e-20 Identity = 49/51 (96.08%), Postives = 49/51 (96.08%), Query Frame = 0
BLAST of CaUC04G067280 vs. ExPASy Swiss-Prot
Match: P93401 (NADH-ubiquinone oxidoreductase chain 2 OS=Oenothera berteroana OX=3950 GN=ND2 PE=2 SV=2) HSP 1 Score: 96.3 bits (238), Expect = 3.5e-19 Identity = 49/51 (96.08%), Postives = 49/51 (96.08%), Query Frame = 0
BLAST of CaUC04G067280 vs. ExPASy Swiss-Prot
Match: P26846 (NADH-ubiquinone oxidoreductase chain 2 OS=Marchantia polymorpha OX=3197 GN=ND2 PE=3 SV=2) HSP 1 Score: 84.3 bits (207), Expect = 1.4e-15 Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 0
BLAST of CaUC04G067280 vs. ExPASy TrEMBL
Match: A0A2Z6MST2 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_199260 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 9.2e-71 Identity = 147/179 (82.12%), Postives = 148/179 (82.68%), Query Frame = 0
BLAST of CaUC04G067280 vs. ExPASy TrEMBL
Match: A0A2I0I9S4 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_038869 PE=4 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 2.8e-67 Identity = 129/130 (99.23%), Postives = 129/130 (99.23%), Query Frame = 0
BLAST of CaUC04G067280 vs. ExPASy TrEMBL
Match: E6ZDX1 (Uncharacterized protein orf134c OS=Beta vulgaris subsp. maritima OX=350892 GN=orf134c PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 5.2e-66 Identity = 126/130 (96.92%), Postives = 128/130 (98.46%), Query Frame = 0
BLAST of CaUC04G067280 vs. ExPASy TrEMBL
Match: G2XLP0 (Uncharacterized protein OS=Beta macrocarpa OX=343494 GN=orf134c PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 5.2e-66 Identity = 126/130 (96.92%), Postives = 128/130 (98.46%), Query Frame = 0
BLAST of CaUC04G067280 vs. ExPASy TrEMBL
Match: A0A5A7V4H7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43479G00020 PE=4 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 1.3e-64 Identity = 126/130 (96.92%), Postives = 127/130 (97.69%), Query Frame = 0
BLAST of CaUC04G067280 vs. TAIR 10
Match: ATMG00285.1 (NADH dehydrogenase 2A ) HSP 1 Score: 97.8 bits (242), Expect = 8.7e-21 Identity = 49/51 (96.08%), Postives = 49/51 (96.08%), Query Frame = 0
BLAST of CaUC04G067280 vs. TAIR 10
Match: ATMG01320.1 (NADH dehydrogenase 2B ) HSP 1 Score: 97.8 bits (242), Expect = 8.7e-21 Identity = 49/51 (96.08%), Postives = 49/51 (96.08%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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