CaUC01G007620 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCAAATACTCCACATGAAACCTCCCTAGATATGAATGAACTCTATTCCTTCATCACTGCAATCACAAAGAGAAATCCTGGAATAAGCAGTTGTACCTGGGGAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCTTCTTCTTCACCAGTCAACAGCCCTCCTCAGCTTGGGAAGATCTTTCTTAGTCTAACTTTTCAGGCCATTTTAGCCTTGTTTTTCAGCTTATCTTCTTCATCTCCTCCATTTCCTACAGTTCTTTTTGGGGCTGTTATGTTGATTGGCTTTGCAGTTTCATTTGCTGGAGTTCTCCTTCAAAATGCATTCCCAAAAATTGCACTTCTGTTAGAAAAGTTAGGTGCTCTATTTGCTGCAATTGGTATCTGCATCATAGCAAGTCTTCTAGTCCATCCAAACCTTGCTTGGATATGTTGGTTGGCATGTGGCTTCTTCCTGCTAGCCTTTATTATATCATTCAAGTGAATTTGACAGAATGTGTATCCCAATTGTCCAAGTGTACAGAGGATGCACTTCTGTAGAATCCATGCCCATGTGTTTTGATCTCTTTTACCGTCTCTGATTCTTGACCTGGTGTGGTTCATCACCAAGACAACATCAGCTCCAATTTACCTGAAAAATCATGTTATTCTACAACTTAAAATGACATGATAACTCTGCCTGTGTCATGCATTAAGCATCATTTCTTCTACGCAGCCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGACCATTGGATCTTGAGCTTGTTCTAAAAGACAGAGGCTTAAAGTATAGGTGGCCATATTTTCATCAAAGTAGAGTAGTACTAAAGATGGCAGCATCAAGAAAGATGGGCTCTCTCATTGGTGCAGACTGA ATGGCAGCAAATACTCCACATGAAACCTCCCTAGATATGAATGAACTCTATTCCTTCATCACTGCAATCACAAAGAGAAATCCTGGAATAAGCAGTTGTACCTGGGGAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCTTCTTCTTCACCAGTCAACAGCCCTCCTCAGCTTGGGAAGATCTTTCTTAGTCTAACTTTTCAGGCCATTTTAGCCTTGTTTTTCAGCTTATCTTCTTCATCTCCTCCATTTCCTACAGTTCTTTTTGGGGCTGTTATGTTGATTGGCTTTGCAGTTTCATTTGCTGGAGTTCTCCTTCAAAATGCATTCCCAAAAATTGCACTTCTGTTAGAAAAGTTAGGTGCTCTATTTGCTGCAATTGGTATCTGCATCATAGCAAGTCTTCTAGTCCATCCAAACCTTGCTTGGATATGTTGCCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGACCATTGGATCTTGAGCTTGTTCTAAAAGACAGAGGCTTAAAGTATAGGTGGCCATATTTTCATCAAAGTAGAGTAGTACTAAAGATGGCAGCATCAAGAAAGATGGGCTCTCTCATTGGTGCAGACTGA ATGGCAGCAAATACTCCACATGAAACCTCCCTAGATATGAATGAACTCTATTCCTTCATCACTGCAATCACAAAGAGAAATCCTGGAATAAGCAGTTGTACCTGGGGAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCTTCTTCTTCACCAGTCAACAGCCCTCCTCAGCTTGGGAAGATCTTTCTTAGTCTAACTTTTCAGGCCATTTTAGCCTTGTTTTTCAGCTTATCTTCTTCATCTCCTCCATTTCCTACAGTTCTTTTTGGGGCTGTTATGTTGATTGGCTTTGCAGTTTCATTTGCTGGAGTTCTCCTTCAAAATGCATTCCCAAAAATTGCACTTCTGTTAGAAAAGTTAGGTGCTCTATTTGCTGCAATTGGTATCTGCATCATAGCAAGTCTTCTAGTCCATCCAAACCTTGCTTGGATATGTTGCCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGACCATTGGATCTTGAGCTTGTTCTAAAAGACAGAGGCTTAAAGTATAGGTGGCCATATTTTCATCAAAGTAGAGTAGTACTAAAGATGGCAGCATCAAGAAAGATGGGCTCTCTCATTGGTGCAGACTGA MAANTPHETSLDMNELYSFITAITKRNPGISSCTWGASDCLPIYIKMQRPSSSPVNSPPQLGKIFLSLTFQAILALFFSLSSSSPPFPTVLFGAVMLIGFAVSFAGVLLQNAFPKIALLLEKLGALFAAIGICIIASLLVHPNLAWICCRSQARTKEEGSVIRPLDLELVLKDRGLKYRWPYFHQSRVVLKMAASRKMGSLIGAD Homology
BLAST of CaUC01G007620 vs. NCBI nr
Match: KGN49806.1 (hypothetical protein Csa_004683 [Cucumis sativus]) HSP 1 Score: 184.5 bits (467), Expect = 9.2e-43 Identity = 103/151 (68.21%), Postives = 113/151 (74.83%), Query Frame = 0
BLAST of CaUC01G007620 vs. NCBI nr
Match: KAA0050244.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98162.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]) HSP 1 Score: 184.1 bits (466), Expect = 1.2e-42 Identity = 102/149 (68.46%), Postives = 110/149 (73.83%), Query Frame = 0
BLAST of CaUC01G007620 vs. NCBI nr
Match: KAA0050246.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98160.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]) HSP 1 Score: 150.2 bits (378), Expect = 1.9e-32 Identity = 86/138 (62.32%), Postives = 99/138 (71.74%), Query Frame = 0
BLAST of CaUC01G007620 vs. NCBI nr
Match: XP_022146444.1 (uncharacterized protein LOC111015658 [Momordica charantia]) HSP 1 Score: 143.7 bits (361), Expect = 1.8e-30 Identity = 79/125 (63.20%), Postives = 91/125 (72.80%), Query Frame = 0
BLAST of CaUC01G007620 vs. NCBI nr
Match: KGN49808.1 (hypothetical protein Csa_004650 [Cucumis sativus]) HSP 1 Score: 141.7 bits (356), Expect = 6.8e-30 Identity = 79/149 (53.02%), Postives = 105/149 (70.47%), Query Frame = 0
BLAST of CaUC01G007620 vs. ExPASy TrEMBL
Match: A0A0A0KQ03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 4.5e-43 Identity = 103/151 (68.21%), Postives = 113/151 (74.83%), Query Frame = 0
BLAST of CaUC01G007620 vs. ExPASy TrEMBL
Match: A0A5D3BEH8 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00440 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 5.8e-43 Identity = 102/149 (68.46%), Postives = 110/149 (73.83%), Query Frame = 0
BLAST of CaUC01G007620 vs. ExPASy TrEMBL
Match: A0A5A7U7U1 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00420 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 9.3e-33 Identity = 86/138 (62.32%), Postives = 99/138 (71.74%), Query Frame = 0
BLAST of CaUC01G007620 vs. ExPASy TrEMBL
Match: A0A6J1CY58 (uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015658 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 8.7e-31 Identity = 79/125 (63.20%), Postives = 91/125 (72.80%), Query Frame = 0
BLAST of CaUC01G007620 vs. ExPASy TrEMBL
Match: A0A0A0KJP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 3.3e-30 Identity = 79/149 (53.02%), Postives = 105/149 (70.47%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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