CcUC07G137110 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G137110
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Mitochondrial transcription termination factor family protein
Location	CicolChr07: 22079089 .. 22080509 (-)
RNA-Seq Expression	CcUC07G137110
Synteny	CcUC07G137110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACGCTCTGAGACCATCATTCTCTGTTTCCTCTCGCCTTAATCCTCCTTCCTTCCTCCGAATTGATCCATTTTTGTATTATTTCTTCTCTTCTTCTTCCCAAACCCAAGCCTCTTCTTCAAATGGAATCGTCATCCAATACCTTATCGATACCTTCCAAATGTCTCCCGCCAGAGCGGAGTCGATTATGAGCACCCGTAGAGGCCTTCAATCAACTGAAAAGCCTCAATCCGTGTACAAATATCTTTCAGAGCTTGGATTCTCCGATGCCCACATTAAATCGGCGATTCGCATCACGCCGCAGATCGCGTTTTCCAGCATTGAGAAAACTCTGAAGCCAAAGATAGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAAGTTCATTTCCAGGCATTCTTCGCTTTTAACTGTTAGTTTGGAGAAGAAATTGATGCCCAGTGTTGAGATTCTTAAGAATGTTCTCCACAAGGATAAGTGTAATAACGGTCTCTTGCTAGTTATGCGGCGATGTTCTTATACTATTATGAGATCCCCATATAAAAGGTTGTCTGTAAATATTAACTACTTACGAAGTTGTGGGATTGTTGATTCTCAACTCTCTATGTTACTGAAGAGACAACCTGGACTTTTTGGTAAGCGTGAATCCCGACTTAAAGATATTGTTTCCATGGTTGTAGAAACTGGTTTTTCTACCAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAAGTAATGCTACCTTTAACAAGAAAGTGGAGCTGATTTGTAGCTTTGGAATAACCGAGAAAGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGGTAAGGACCTCCATTGATAAACTTAAGCTTGGTTTAGAATTTTTCATGAACGAGGCAAAAGTTAGCAAATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCAATGCAGGGGAGAGTGCTCCCTCGTTATAGAGTTCTACAGATTGTGAAGTTGAAGAGGCTAAAGAAGAAGCACCCGAAATTAATCGCTATATTGGGGTTGTCTGATGAGGATTTCTTGGATAAATTTGTGTGTAGATTTCCTGATAATATGAAAGATTTGTTGGTGGCCTATAGAGGTGATTCTGTGGGTGCATTGCAGCCTAAGGAGTTAGCAACATGAGGACGGGGCCAGAAGTAGAGCTAATATTTGATCTACCAGCTGGTTGCCGGTTGCTCGGTTTGTCGATCTCACGTGCTTTGTGCACTAGATTTGGACTAATTCATATGGTTGTTTGCCGATATGAACTTTGGTTTCTTGCAAAAGCTGTGCACTATGTTCCAGAGCACTTCTTGAAGTTTTGGGAAGTGTATCTGAGAATGTTAAAATCAAATGTTTTCAATGTGTCTGTATTTGACAAGTGTTGA

mRNA sequence

ATGTACGCTCTGAGACCATCATTCTCTGTTTCCTCTCGCCTTAATCCTCCTTCCTTCCTCCGAATTGATCCATTTTTGTATTATTTCTTCTCTTCTTCTTCCCAAACCCAAGCCTCTTCTTCAAATGGAATCGTCATCCAATACCTTATCGATACCTTCCAAATGTCTCCCGCCAGAGCGGAGTCGATTATGAGCACCCGTAGAGGCCTTCAATCAACTGAAAAGCCTCAATCCGTGTACAAATATCTTTCAGAGCTTGGATTCTCCGATGCCCACATTAAATCGGCGATTCGCATCACGCCGCAGATCGCGTTTTCCAGCATTGAGAAAACTCTGAAGCCAAAGATAGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAAGTTCATTTCCAGGCATTCTTCGCTTTTAACTGTTAGTTTGGAGAAGAAATTGATGCCCAGTGTTGAGATTCTTAAGAATGTTCTCCACAAGGATAAGTGTAATAACGGTCTCTTGCTAGTTATGCGGCGATGTTCTTATACTATTATGAGATCCCCATATAAAAGGTTGTCTGTAAATATTAACTACTTACGAAGTTGTGGGATTGTTGATTCTCAACTCTCTATGTTACTGAAGAGACAACCTGGACTTTTTGGTAAGCGTGAATCCCGACTTAAAGATATTGTTTCCATGGTTGTAGAAACTGGTTTTTCTACCAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAAGTAATGCTACCTTTAACAAGAAAGTGGAGCTGATTTGTAGCTTTGGAATAACCGAGAAAGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGGGGAGAGTGCTCCCTCGTTATAGAGTTCTACAGATTGTGAAGTTGAAGAGGCTAAAGAAGAAGCACCCGAAATTAATCGCTATATTGGGGTTGTCTGATGAGGATTTCTTGGATAAATTTGTGTGTAGATTTCCTGATAATATGAAAGATTTGTTGGTGGCCTATAGAGCTGGTTGCCGGTTGCTCGGTTTGTCGATCTCACGTGCTTTGTGCACTAGATTTGGACTAATTCATATGGTTGTTTGCCGATATGAACTTTGGTTTCTTGCAAAAGCTGTGCACTATGTTCCAGAGCACTTCTTGAAGTTTTGGGAAGTGTATCTGAGAATGTTAAAATCAAATGTTTTCAATGTGTCTGTATTTGACAAGTGTTGA

Coding sequence (CDS)

ATGTACGCTCTGAGACCATCATTCTCTGTTTCCTCTCGCCTTAATCCTCCTTCCTTCCTCCGAATTGATCCATTTTTGTATTATTTCTTCTCTTCTTCTTCCCAAACCCAAGCCTCTTCTTCAAATGGAATCGTCATCCAATACCTTATCGATACCTTCCAAATGTCTCCCGCCAGAGCGGAGTCGATTATGAGCACCCGTAGAGGCCTTCAATCAACTGAAAAGCCTCAATCCGTGTACAAATATCTTTCAGAGCTTGGATTCTCCGATGCCCACATTAAATCGGCGATTCGCATCACGCCGCAGATCGCGTTTTCCAGCATTGAGAAAACTCTGAAGCCAAAGATAGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAAGTTCATTTCCAGGCATTCTTCGCTTTTAACTGTTAGTTTGGAGAAGAAATTGATGCCCAGTGTTGAGATTCTTAAGAATGTTCTCCACAAGGATAAGTGTAATAACGGTCTCTTGCTAGTTATGCGGCGATGTTCTTATACTATTATGAGATCCCCATATAAAAGGTTGTCTGTAAATATTAACTACTTACGAAGTTGTGGGATTGTTGATTCTCAACTCTCTATGTTACTGAAGAGACAACCTGGACTTTTTGGTAAGCGTGAATCCCGACTTAAAGATATTGTTTCCATGGTTGTAGAAACTGGTTTTTCTACCAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAAGTAATGCTACCTTTAACAAGAAAGTGGAGCTGATTTGTAGCTTTGGAATAACCGAGAAAGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGGGGAGAGTGCTCCCTCGTTATAGAGTTCTACAGATTGTGAAGTTGAAGAGGCTAAAGAAGAAGCACCCGAAATTAATCGCTATATTGGGGTTGTCTGATGAGGATTTCTTGGATAAATTTGTGTGTAGATTTCCTGATAATATGAAAGATTTGTTGGTGGCCTATAGAGCTGGTTGCCGGTTGCTCGGTTTGTCGATCTCACGTGCTTTGTGCACTAGATTTGGACTAATTCATATGGTTGTTTGCCGATATGAACTTTGGTTTCTTGCAAAAGCTGTGCACTATGTTCCAGAGCACTTCTTGAAGTTTTGGGAAGTGTATCTGAGAATGTTAAAATCAAATGTTTTCAATGTGTCTGTATTTGACAAGTGTTGA

Protein sequence

MYALRPSFSVSSRLNPPSFLRIDPFLYYFFSSSSQTQASSSNGIVIQYLIDTFQMSPARAESIMSTRRGLQSTEKPQSVYKYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGKFISRHSSLLTVSLEKKLMPSVEILKNVLHKDKCNNGLLLVMRRCSYTIMRSPYKRLSVNINYLRSCGIVDSQLSMLLKRQPGLFGKRESRLKDIVSMVVETGFSTNTKMFVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVLGRVLPRYRVLQIVKLKRLKKKHPKLIAILGLSDEDFLDKFVCRFPDNMKDLLVAYRAGCRLLGLSISRALCTRFGLIHMVVCRYELWFLAKAVHYVPEHFLKFWEVYLRMLKSNVFNVSVFDKC

Homology

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BLAST of CcUC07G137110 vs. NCBI nr
Match: XP_038888519.1 (transcription termination factor MTERF5, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 542.3 bits (1396), Expect = 3.5e-150
Identity = 290/380 (76.32%), Postives = 311/380 (81.84%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFF---SSSSQTQASSSNGIVIQYLIDTFQMSP 60
           MYALRPSFSVSSRLNPPSFLRI PFLYYFF   SSSS TQ+S+SN IV+QYLIDTFQ+SP
Sbjct: 1   MYALRPSFSVSSRLNPPSFLRIHPFLYYFFSSSSSSSHTQSSASNAIVVQYLIDTFQLSP 60

Query: 61  ARAESIMSTRRGLQSTEKPQSVYKYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIE 120
           ARA SIMS RRGLQSTEKPQSVYKYLS+LGFSDAHI+SAIR+ PQIAFS+IEKTLKPKIE
Sbjct: 61  ARAASIMSCRRGLQSTEKPQSVYKYLSDLGFSDAHIRSAIRLAPQIAFSNIEKTLKPKIE 120

Query: 121 FFQNLGLVGSDLGKFISRHSSLLTVSLEKKLMPSVEILKNVLHKDKCNNGLLLVMRRCSY 180
           FFQNLGLVGSDL KFISRHS+LLTVSLEKKLMPSVEILKN+L KD CN+ LLLV+RR S 
Sbjct: 121 FFQNLGLVGSDLSKFISRHSTLLTVSLEKKLMPSVEILKNILPKDNCNDDLLLVIRRWSD 180

Query: 181 TIMRSPYKRLSVNINYLRSCGIVDSQLSMLLKRQPGLFGKRESRLKDIVSMVVETGFSTN 240
            +MR+P KRLS+NINYL+SCGIVDSQL MLLKRQ  LFG+ ESRLKDIVS+VVE GFSTN
Sbjct: 181 RLMRTPCKRLSININYLQSCGIVDSQLLMLLKRQSSLFGRSESRLKDIVSVVVEIGFSTN 240

Query: 241 TKMFVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVL-------------- 300
           T+MFVHGLHAISSVS  T  KKVELICSFGITEKECMRMFTSAPVL              
Sbjct: 241 TRMFVHGLHAISSVSKVTLKKKVELICSFGITEKECMRMFTSAPVLIRTSIGKLKLGLEF 300

Query: 301 ------------------------GRVLPRYRVLQIVKLKRLKKKHPKLIAILGLSDEDF 340
                                   GRVLPRYRVLQIVK KRL KKHPK I  LG+SDEDF
Sbjct: 301 FMNEAKVSKSDIVGSPACLMHAMQGRVLPRYRVLQIVKSKRLMKKHPKFILTLGMSDEDF 360

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BLAST of CcUC07G137110 vs. NCBI nr
Match: KAG7015351.1 (Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 520.8 bits (1340), Expect = 1.1e-143
Identity = 275/380 (72.37%), Postives = 309/380 (81.32%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFFSSSSQTQASSSNGIVIQYLIDTFQMSPARA 60
           MYALR SFS+SSR NP S LRIDP LY FFSSSS +QAS+S GIV+QYLIDTF++SPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  ESIMSTRRGLQSTEKPQSVYKYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQ 120
            SIM +RRG++STEKPQSVYKYLSELGFS AHI+S IR+ PQIAFS+IE+TLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSSLLTVSLEKKLMPSVEILKNVLHKDKCNNGLLLVMRRCSYTIM 180
           NLGLVGSDLG+FIS+HS+LLTVSLEKKLMPSVEILK+V  KD+CN+ LL VM+RCS  +M
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLM 180

Query: 181 RSPYKRLSVNINYLRSCGIVDSQLSMLLKRQPGLFGKRESRLKDIVSMVVETGFSTNTKM 240
           RSPY RL VNINYL+SCGIV SQLSMLLKRQP LFGKRES+++DIVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVL----------------- 300
           FVHGLHAISSV+NATF KKVELICSFGITEKECMRMFTSAPVL                 
Sbjct: 241 FVHGLHAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 ---------------------GRVLPRYRVLQIVKLKRLKKKHPKLIAILGLSDEDFLDK 343
                                GRVLPRYRVLQ+VK K L KKHP+L+ ILG+SDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360

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BLAST of CcUC07G137110 vs. NCBI nr
Match: XP_022984673.1 (uncharacterized protein LOC111482884 isoform X1 [Cucurbita maxima] >XP_022984674.1 uncharacterized protein LOC111482884 isoform X2 [Cucurbita maxima] >XP_022984675.1 uncharacterized protein LOC111482884 isoform X3 [Cucurbita maxima])

HSP 1 Score: 519.6 bits (1337), Expect = 2.4e-143
Identity = 273/380 (71.84%), Postives = 309/380 (81.32%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFFSSSSQTQASSSNGIVIQYLIDTFQMSPARA 60
           MYALR SFS+SSR NPPS LRIDP LY FFSSSS +QAS+S GIV+QYLIDTF++SPARA
Sbjct: 1   MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  ESIMSTRRGLQSTEKPQSVYKYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQ 120
            SIMS+RRG+ STEKPQSVYKYLSELGFS+AHI+S IR+ PQIAFS+IEKTLKPKIEFFQ
Sbjct: 61  VSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSSLLTVSLEKKLMPSVEILKNVLHKDKCNNGLLLVMRRCSYTIM 180
           NLGLVGSDLG+FIS+HS+LLT+SLEK+LMPSVEILK+V  KD+CN+ LL V+RRCS  +M
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLM 180

Query: 181 RSPYKRLSVNINYLRSCGIVDSQLSMLLKRQPGLFGKRESRLKDIVSMVVETGFSTNTKM 240
           RSPY RL VNINYL+SCGIV SQLSMLLKRQP LFG RES+++D+VSMVVETGFSTNT+M
Sbjct: 181 RSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRM 240

Query: 241 FVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVL----------------- 300
           FVHGLHAISSVSNATF KKVELICSFGITEKECMRMFTSAPVL                 
Sbjct: 241 FVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 ---------------------GRVLPRYRVLQIVKLKRLKKKHPKLIAILGLSDEDFLDK 343
                                GRVLPRYRVLQ+V  KRL KKH +LI ILG+SDE+FLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDK 360

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BLAST of CcUC07G137110 vs. NCBI nr
Match: XP_022984676.1 (uncharacterized protein LOC111482884 isoform X4 [Cucurbita maxima])

HSP 1 Score: 516.2 bits (1328), Expect = 2.7e-142
Identity = 274/380 (72.11%), Postives = 305/380 (80.26%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFFSSSSQTQASSSNGIVIQYLIDTFQMSPARA 60
           MYALR SFS+SSR NPPS LRIDP LY FFSSSS +QAS+S GIV+QYLIDTF++SPARA
Sbjct: 1   MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  ESIMSTRRGLQSTEKPQSVYKYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQ 120
            SIMS+RRG+ STEKPQSVYKYLSELGFS+AHI+S IR+ PQIAFS+IEKTLKPKIEFFQ
Sbjct: 61  VSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSSLLTVSLEKKLMPSVEILKNVLHKDKCNNGLLLVMRRCSYTIM 180
           NLGLVGSDLG FIS+HS+LLT+SLEK+LMPSVEILK+V  KD+CN+  L VMRRCS  + 
Sbjct: 121 NLGLVGSDLGWFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDFLQVMRRCSDMLK 180

Query: 181 RSPYKRLSVNINYLRSCGIVDSQLSMLLKRQPGLFGKRESRLKDIVSMVVETGFSTNTKM 240
           RSPY RL VNINYL+SCGIV SQLSMLLKRQP LFG RES+++DIVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVL----------------- 300
           FVHGLHAISSVSNATF KKVELICSFGITEKECMRMFTSAPVL                 
Sbjct: 241 FVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 ---------------------GRVLPRYRVLQIVKLKRLKKKHPKLIAILGLSDEDFLDK 343
                                GRVLPRYRVLQ+V  KRL KKH +LI ILG+SDE+FLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDK 360

[Close]

BLAST of CcUC07G137110 vs. NCBI nr
Match: XP_023552362.1 (uncharacterized protein LOC111810052 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 515.4 bits (1326), Expect = 4.5e-142
Identity = 273/380 (71.84%), Postives = 306/380 (80.53%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFFSSSSQTQASSSNGIVIQYLIDTFQMSPARA 60
           MYALR SFS+SSR NP S LRIDP LY FFSSSS +QAS+S GIV+QYLIDTF++SPARA
Sbjct: 1   MYALRSSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  ESIMSTRRGLQSTEKPQSVYKYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQ 120
            SIM +RRG++STEKPQSVYKYLSELGFS AHI+S IR+ PQIAFS+IEKTLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSSLLTVSLEKKLMPSVEILKNVLHKDKCNNGLLLVMRRCSYTIM 180
           NLGLVGSDLG+FIS+HS+LLTVSLEKKLMPSVEIL++V  KD+CN+ LL  M+RC   +M
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILQSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 RSPYKRLSVNINYLRSCGIVDSQLSMLLKRQPGLFGKRESRLKDIVSMVVETGFSTNTKM 240
           R PY RL VNINYL+SCGIV SQLSMLLKRQP LFGKRES+++DIVSMVVETGFSTNTKM
Sbjct: 181 RFPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVL----------------- 300
           FVHGLHAISSV+NATF KKVELICSFGITEKECMRMFTSAPVL                 
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSGGKLKRGLEFFMN 300

Query: 301 ---------------------GRVLPRYRVLQIVKLKRLKKKHPKLIAILGLSDEDFLDK 343
                                GRVLPRYRVLQ+VK KRL  KHP+LI ILG+SDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMEGRVLPRYRVLQVVKSKRLLMKHPQLIDILGMSDEDFLDK 360

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BLAST of CcUC07G137110 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.8e-08
Identity = 49/162 (30.25%), Postives = 79/162 (48.77%), Query Frame = 0


Query: 75  KPQSVYKYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGKFIS 134
           K + V ++L +LG   + I + +   PQI   S+   LKP + F + LG+  +   K IS
Sbjct: 231 KIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIIS 290

Query: 135 RHSSLLTVSLEKKLMPSVEILKNV-LHKDKCNNGLLLVMRRCSYTIMRSPYKRLSVNINY 194
           R  ++LT S  +KL  +VE L    L +++       ++ RC   +  S   +L   + Y
Sbjct: 291 RFPAILTYS-RQKLTSTVEFLSQTGLTEEQIGR----ILTRCPNIMSYSVEDKLRPTMEY 350

Query: 195 LRSCGIVDSQLSMLLKRQPGLFG-KRESRLKDIVSMVVETGF 235
            RS  +    +++LL R P  FG   ES LK +    +E GF
Sbjct: 351 FRSLNV---DVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGF 384

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BLAST of CcUC07G137110 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.7e-06
Identity = 38/145 (26.21%), Postives = 70/145 (48.28%), Query Frame = 0


Query: 74  EKPQSVYKYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQNLGL-VGSDLGKF 133
           EK   +  +   LG  +  +   I   P++   SI+  L   + F  +LGL     +GK 
Sbjct: 112 EKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKV 171

Query: 134 ISRHSSLLTVSLEKKLMPSVEILKNVLHKDKCNNGLLLVMRRCSYTIMRSPYKRLSVNIN 193
           + ++  L+  S++K+L P+ E LK+ +   +  +G+  V+      + R   K L  N +
Sbjct: 172 LVKNPFLMGYSVDKRLRPTTEFLKSSVGLSE--DGIKSVVMNFPQLLCRDVNKILKPNYD 231

Query: 194 YLRSCGIVDSQLSMLLKRQPGLFGK 218
           YL+ CG  DSQ++ ++   P +  K
Sbjct: 232 YLKECGFGDSQIATMVTGYPQILIK 254

[Close]

BLAST of CcUC07G137110 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.4e-05
Identity = 41/146 (28.08%), Postives = 66/146 (45.21%), Query Frame = 0


Query: 69  GLQSTEKPQSVYKYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQNLGLVGSD 128
           G    E+ + + KY   LG     +K  + + P +    +EKT+ PK+ F Q +G+    
Sbjct: 381 GCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEA 440

Query: 129 LGKFISRHSSLLTVSLEKKLMPSVEILKNVLHKDKCNNGLLLVMRRCSYTIMRSPYKRLS 188
           +G  + +  SLLT SL KK+ P V  L       + + G ++ M      +  S   +L 
Sbjct: 441 IGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPA--LLGCSIGTKLE 500

Query: 189 VNINYLRSCGIVDSQLSMLLKRQPGL 215
            N+ Y  S GI   QL  ++   P L
Sbjct: 501 PNMRYYISLGIRFYQLGEMIADFPML 524

[Close]

BLAST of CcUC07G137110 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 7.1e-05
Identity = 46/175 (26.29%), Postives = 82/175 (46.86%), Query Frame = 0


Query: 14  LNPPSFLRIDPFLYYFFSSSSQTQASSSNGIVIQYLIDTFQMSPARAESIMSTRRGLQST 73
           ++P   LR++P         S   A  S+ + ++ L+ +  +S      I+     L  T
Sbjct: 45  VDPHKALRVNP---------SLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDL-LT 104

Query: 74  EKPQS----VYKYLS-ELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQNLGLVGSD 133
             P+S    V ++LS E+  S+  I  +I   P++  SS++  L+P + F + LG VG D
Sbjct: 105 SDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRD 164

Query: 134 LGKFISRHSSLLTVSLEKKLMPSVEILKNVLHKDKCNNGLLLVMRRCSYTIMRSP 184
                SR++ LL  ++E+ L+P +E L+          GL       +  ++RSP
Sbjct: 165 --TITSRNTVLLVSNVERTLIPKIEYLE---------EGLGFTREEVAKMVVRSP 198

[Close]

BLAST of CcUC07G137110 vs. ExPASy TrEMBL
Match: A0A6J1JB80 (uncharacterized protein LOC111482884 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482884 PE=3 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 1.2e-143
Identity = 273/380 (71.84%), Postives = 309/380 (81.32%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFFSSSSQTQASSSNGIVIQYLIDTFQMSPARA 60
           MYALR SFS+SSR NPPS LRIDP LY FFSSSS +QAS+S GIV+QYLIDTF++SPARA
Sbjct: 1   MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  ESIMSTRRGLQSTEKPQSVYKYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQ 120
            SIMS+RRG+ STEKPQSVYKYLSELGFS+AHI+S IR+ PQIAFS+IEKTLKPKIEFFQ
Sbjct: 61  VSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSSLLTVSLEKKLMPSVEILKNVLHKDKCNNGLLLVMRRCSYTIM 180
           NLGLVGSDLG+FIS+HS+LLT+SLEK+LMPSVEILK+V  KD+CN+ LL V+RRCS  +M
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLM 180

Query: 181 RSPYKRLSVNINYLRSCGIVDSQLSMLLKRQPGLFGKRESRLKDIVSMVVETGFSTNTKM 240
           RSPY RL VNINYL+SCGIV SQLSMLLKRQP LFG RES+++D+VSMVVETGFSTNT+M
Sbjct: 181 RSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRM 240

Query: 241 FVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVL----------------- 300
           FVHGLHAISSVSNATF KKVELICSFGITEKECMRMFTSAPVL                 
Sbjct: 241 FVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 ---------------------GRVLPRYRVLQIVKLKRLKKKHPKLIAILGLSDEDFLDK 343
                                GRVLPRYRVLQ+V  KRL KKH +LI ILG+SDE+FLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDK 360

[Close]

BLAST of CcUC07G137110 vs. ExPASy TrEMBL
Match: A0A6J1J5Y4 (uncharacterized protein LOC111482884 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111482884 PE=3 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 1.3e-142
Identity = 274/380 (72.11%), Postives = 305/380 (80.26%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFFSSSSQTQASSSNGIVIQYLIDTFQMSPARA 60
           MYALR SFS+SSR NPPS LRIDP LY FFSSSS +QAS+S GIV+QYLIDTF++SPARA
Sbjct: 1   MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  ESIMSTRRGLQSTEKPQSVYKYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQ 120
            SIMS+RRG+ STEKPQSVYKYLSELGFS+AHI+S IR+ PQIAFS+IEKTLKPKIEFFQ
Sbjct: 61  VSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSSLLTVSLEKKLMPSVEILKNVLHKDKCNNGLLLVMRRCSYTIM 180
           NLGLVGSDLG FIS+HS+LLT+SLEK+LMPSVEILK+V  KD+CN+  L VMRRCS  + 
Sbjct: 121 NLGLVGSDLGWFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDFLQVMRRCSDMLK 180

Query: 181 RSPYKRLSVNINYLRSCGIVDSQLSMLLKRQPGLFGKRESRLKDIVSMVVETGFSTNTKM 240
           RSPY RL VNINYL+SCGIV SQLSMLLKRQP LFG RES+++DIVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVL----------------- 300
           FVHGLHAISSVSNATF KKVELICSFGITEKECMRMFTSAPVL                 
Sbjct: 241 FVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 ---------------------GRVLPRYRVLQIVKLKRLKKKHPKLIAILGLSDEDFLDK 343
                                GRVLPRYRVLQ+V  KRL KKH +LI ILG+SDE+FLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDK 360

[Close]

BLAST of CcUC07G137110 vs. ExPASy TrEMBL
Match: A0A6J1EN21 (uncharacterized protein LOC111435860 OS=Cucurbita moschata OX=3662 GN=LOC111435860 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 3.7e-142
Identity = 272/380 (71.58%), Postives = 308/380 (81.05%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFFSSSSQTQASSSNGIVIQYLIDTFQMSPARA 60
           MYALR SFS+SSR NP S LRIDP LY FFSSSS +QAS+S GIV+QYLIDTF++SPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  ESIMSTRRGLQSTEKPQSVYKYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQ 120
            SIM +RRGL+STEKPQSVYKYLSELGFS AHI+S IR+ PQIAFS+IE+TLKPKIEFFQ
Sbjct: 61  VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSSLLTVSLEKKLMPSVEILKNVLHKDKCNNGLLLVMRRCSYTIM 180
           NLGLVGSDLG+FIS+HS+LLTVSLEK+LMPSVEILK+V  KD+CN+ LL VM+RCS  +M
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180

Query: 181 RSPYKRLSVNINYLRSCGIVDSQLSMLLKRQPGLFGKRESRLKDIVSMVVETGFSTNTKM 240
           RSPY RL VNI+YL+SCGIV SQLSMLLKRQP LFG RES+++DIVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVL----------------- 300
           FVHGLH+ISSVSNATF KKVELICSFGITEKECMRMFTSAP L                 
Sbjct: 241 FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300

Query: 301 ---------------------GRVLPRYRVLQIVKLKRLKKKHPKLIAILGLSDEDFLDK 343
                                GRVLPRYRVLQ+VK KRL +KHP+L+ ILG+SDEDFLDK
Sbjct: 301 EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK 360

[Close]

BLAST of CcUC07G137110 vs. ExPASy TrEMBL
Match: A0A6J1END2 (uncharacterized protein LOC111436067 OS=Cucurbita moschata OX=3662 GN=LOC111436067 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 6.4e-142
Identity = 272/380 (71.58%), Postives = 306/380 (80.53%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFFSSSSQTQASSSNGIVIQYLIDTFQMSPARA 60
           MYALR SFS+SSR NP S LRIDP LY FFSSSS +QAS+S GIV+QYLIDTF++SPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  ESIMSTRRGLQSTEKPQSVYKYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQ 120
            SIM +RRG++STEKPQSVYKYLSELGFS AHI+S IR+ PQIAFS+IEKTLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSSLLTVSLEKKLMPSVEILKNVLHKDKCNNGLLLVMRRCSYTIM 180
           N GLVGSDLG+FIS+HS+LLTVSLEKKLMPSVEILK+V  KD+CN+ LL  M+RC   +M
Sbjct: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 RSPYKRLSVNINYLRSCGIVDSQLSMLLKRQPGLFGKRESRLKDIVSMVVETGFSTNTKM 240
           RSPY RL VNINYL+SCGIV SQLSMLLKRQP LFGKRES++++IVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVL----------------- 300
           FVHGLHAISSV+NATF KKVELICSFGITEKECMRMFTSAPVL                 
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 ---------------------GRVLPRYRVLQIVKLKRLKKKHPKLIAILGLSDEDFLDK 343
                                GRVLPRYRVLQ+VK K L KKHP+L+ ILG+SDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360

[Close]

BLAST of CcUC07G137110 vs. ExPASy TrEMBL
Match: A0A6J1C8W1 (uncharacterized protein LOC111008506 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008506 PE=3 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 1.1e-130
Identity = 260/381 (68.24%), Postives = 295/381 (77.43%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFF-SSSSQTQASSSNGIVIQYLIDTFQMSPAR 60
           MYALR  FS+S+R   P    IDP L YFF SSSS+ +AS++N IV+QYL+D F +S AR
Sbjct: 1   MYALRSIFSLSARHCHP----IDPPLCYFFSSSSSRREASAANAIVVQYLVDNFNLSTAR 60

Query: 61  AESIMSTRRGLQSTEKPQSVYKYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFF 120
           A +IMS R+G++STEKP+SV KYLSELGFSDAHI+SAIRI+PQIAFSS+EKTLKPKIEFF
Sbjct: 61  ALAIMSCRKGVESTEKPRSVCKYLSELGFSDAHIQSAIRISPQIAFSSVEKTLKPKIEFF 120

Query: 121 QNLGLVGSDLGKFISRHSSLLTVSLEKKLMPSVEILKNVLHKDKCNNGLLLVMRRCSYTI 180
           QNLGLVGSDLGKFIS HSSLLTVSL+ KL PSVEILKNV  KD+ N+ LL VMRRCS  +
Sbjct: 121 QNLGLVGSDLGKFISNHSSLLTVSLKNKLRPSVEILKNVFPKDEDNSNLLQVMRRCSDIL 180

Query: 181 MRSPYKRLSVNINYLRSCGIVDSQLSMLLKRQPGLFGKRESRLKDIVSMVVETGFSTNTK 240
           MR P  RL VNINY RSCGIVDSQLSMLLKRQP LFG+RESR++D+VSM VETGFSTNTK
Sbjct: 181 MRCPESRLLVNINYFRSCGIVDSQLSMLLKRQPVLFGRRESRVRDLVSMAVETGFSTNTK 240

Query: 241 MFVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVL---------------- 300
           MFVHGLHAISSVSNATF KKVELICSFG TEKECM+MFTSAPVL                
Sbjct: 241 MFVHGLHAISSVSNATFKKKVELICSFGFTEKECMKMFTSAPVLIRTSIAKLKTGIEFFM 300

Query: 301 ----------------------GRVLPRYRVLQIVKLKRLKKKHPKLIAILGLSDEDFLD 343
                                 GRVLPRYRVLQ+VK KRL +K+P+L+  LG+S+EDF D
Sbjct: 301 NEAKVSRSLIVRRPTSLMHSMQGRVLPRYRVLQVVKSKRLTRKNPELVDTLGISEEDFFD 360

[Close]

BLAST of CcUC07G137110 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 208.0 bits (528), Expect = 1.4e-53
Identity = 134/369 (36.31%), Postives = 212/369 (57.45%), Query Frame = 0


Query: 21  RIDPFLYYFFSSSSQTQASSSNGIVIQYLIDTFQMSPARAESIMSTRRGLQSTEKPQSVY 80
           R D  L     SS+ T AS SN   +++L D     P  A +I      L+S E+P+SV 
Sbjct: 17  RWDRALSLHHFSSNATPASISNPAFVEFLRDNGFQKPL-AIAIAMRYPNLKSLEQPRSVI 76

Query: 81  KYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGKFISRHSSLL 140
           + L    FSD  I+ +IR+ P++ F ++EK L+PK+ FF+++G  GS LGKF+S++SS++
Sbjct: 77  QMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVV 136

Query: 141 TVSLEKKLMPSVEILKNVL---HKDKCNNGLLLVMRRCSYTIM-RSPYKRLSVNINYLRS 200
            VSL KKL+P+VEILK+++   H+D     L +++ RC + ++ R P   L  NI+YL +
Sbjct: 137 GVSLVKKLIPTVEILKSIVAPKHED-----LPVILSRCGWLLLSRDPNLFLLPNISYLET 196

Query: 201 CGIVDSQLSMLLKRQPGLFGKRESRLKDIVSMVVETGFSTNTKMFVHGLHAISSVSNATF 260
           CGIV SQL+ LL+RQP +F   E +L+  VS  ++ GF+ N++M VH + ++SS+S  TF
Sbjct: 197 CGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTF 256

Query: 261 NKKVELICSFGITEKECMRMFTSAPVL--------------------------------- 320
           ++KV+L  + G +E E   +   +P L                                 
Sbjct: 257 DRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVL 316

Query: 321 -----GRVLPRYRVLQIVKLKRL----KKKHPKLIAILGLSDEDFLDKFVCRFPDNM-KD 343
                 RV+PR +VLQI++ K L    +KK   ++ I+ +++E FL+K+V RF D + ++
Sbjct: 317 SYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEE 376

[Close]

BLAST of CcUC07G137110 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 114.0 bits (284), Expect = 2.8e-25
Identity = 88/339 (25.96%), Postives = 158/339 (46.61%), Query Frame = 0


Query: 46  IQYLIDTFQMSPARAESIMSTRRGLQSTEKPQSVYKYLSELGFSDAHIKSAIRITPQIAF 105
           + YLID+  +SP  A ++ S +  L S E+P +V   L + GF+ A I S ++  P +  
Sbjct: 72  LNYLIDSCGLSPDSA-TVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLL 131

Query: 106 SSIEKTLKPKIEFFQNLGLVGSDLGKFISRHSSLLTVSLEKKLMPSVEILKNVLHKDKCN 165
           ++ E  L PK+ FF ++G+  S L + ++   ++LT SL  +L+PS   LK+VL  D+  
Sbjct: 132 ANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE-- 191

Query: 166 NGLLLVMRRCSYTIMRSPYKRLSVNINYLRSCGIVDSQLSMLLKRQPGLFGKRESRLKDI 225
             ++  +RR ++  +    K L  NINY+   G+ +  + +LL   P    ++    + I
Sbjct: 192 -KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAI 251

Query: 226 VSMVVETGFSTNTKMFVHGLHAISSVSN-ATFNKKVELICSFGITEKECM---------- 285
                E GF+     FV  +HA+S   N + ++K  E+   +G +E + M          
Sbjct: 252 AKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCM 311

Query: 286 ----------------------RMFTSAPVL------GRVLPRYRVLQIVKLKRLKKKHP 345
                                 R     PV+       R++PR  V +++    L K+  
Sbjct: 312 MLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDW 371

[Close]

BLAST of CcUC07G137110 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-24
Identity = 88/344 (25.58%), Postives = 155/344 (45.06%), Query Frame = 0


Query: 31  SSSSQTQASSSNGIVIQYLIDTFQMSPARAESIMSTRRGLQSTEKPQSVYKYLSELGFSD 90
           S + + Q        + YL+D+  +S   A+S  S    L S++KP SV     + GF++
Sbjct: 44  SENLEKQKPCLESFTVSYLVDSCGLSLESAKS-NSRFVKLVSSKKPDSVLALFKDHGFTN 103

Query: 91  AHIKSAIRITPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGKFISRHSSLLTVSLEKKLMP 150
             I S I+  P++   S E  + PK+ FF ++G   SD  K IS    +L+ SL K+L+P
Sbjct: 104 DQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIP 163

Query: 151 SVEILKNVLHKDKCNNGLLLVMRRCSYTIMRSPYKRLSVNINYLRSCGIVDSQLSMLLKR 210
             + LK++L +++    ++  ++R            +S+ ++  R  G+ D  +  L++ 
Sbjct: 164 CYDSLKSILVEEE---SVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQA 223

Query: 211 QPGLFGKRESRLKDIVSMVVETGFSTNTKMFVHGLHAISSVSNATFNKKVELICSFG--- 270
            P  F  RE R  ++++ V   GF      FVH + A    S +   +K +L   FG   
Sbjct: 224 SPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSK 283

Query: 271 ---------------ITEKECM--------------RMFTSAPVL------GRVLPRYRV 330
                          +++++ M              R   + PV+       R+ PR +V
Sbjct: 284 EDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQV 343

Query: 331 LQIVKLKRL-KKKHPKLIAILGLSDEDFLDKFVCRFPDNMKDLL 336
           + ++  K L KK+      IL L   +F+DKFV ++ D M  L+
Sbjct: 344 ISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLV 383

[Close]

BLAST of CcUC07G137110 vs. TAIR 10
Match: AT3G46950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 84.7 bits (208), Expect = 1.8e-16
Identity = 70/291 (24.05%), Postives = 132/291 (45.36%), Query Frame = 0


Query: 24  PFLYYFFSSS-SQTQASSSNGIVIQYLIDTFQMSPARAESIMSTRRGLQSTEKPQSVYKY 83
           PF    FSS+ ++  +   +   + YL+++  ++   AE+I S +   +    P SV   
Sbjct: 32  PFTTKSFSSTIAKDSSPKGSTFTVSYLVESLGLTKKLAETI-SKKVTFEDKVNPDSVLNL 91

Query: 84  LSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGKFISRHSSLLTV 143
           L   GF D+ I   IR  P++  +  EK+L+PK++F ++ G   S++ + +S   ++L  
Sbjct: 92  LRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPTILDK 151

Query: 144 SLEKKLMPSVEILKNVLHKDKCNNGLLLVMRRCSYTIMRSPYKRLSVNINYLRSCGIVDS 203
             E+ +    + +K+++   K           C          R+  NI+ LR  G+   
Sbjct: 152 KGEESVSLYYDFVKDIMQDGK---------SLCISCPEGKKGNRIR-NISVLRELGVPQK 211

Query: 204 QL-SMLLKRQPGLFGKRESRLKDIVSMVVETGFSTNTKMFVHGLHAISSVSNATFNKKVE 263
            L S+L+ R   + GK   + ++ +  VV+ GF      FV  LH +  +S  T  +KV 
Sbjct: 212 LLFSLLISRYQPVCGK--EKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVN 271

Query: 264 LICSFGITEKECMRMFTSAPVLGRVLPRYRVLQIVKLKRLKKKHPKLIAIL 313
           +    G +E E   +F   P   +   +  +L    LK+      ++I++L
Sbjct: 272 VYKRLGFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCGLVEEEIISVL 309

[Close]

BLAST of CcUC07G137110 vs. TAIR 10
Match: AT1G62120.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 83.6 bits (205), Expect = 4.1e-16
Identity = 78/306 (25.49%), Postives = 131/306 (42.81%), Query Frame = 0


Query: 29  FFSSSSQTQASSSNG-----IVIQYLIDTFQMSPARAESIMSTRRGLQSTEKPQSVYKYL 88
           F SS+     SS +G       + YL+D+  ++   AESI S +    +   P SV   L
Sbjct: 37  FSSSAIAADVSSRDGRKGHNFTVSYLVDSLGLATKVAESI-SMKVSFDNKGNPDSVLSLL 96

Query: 89  SELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGKFISRHSSLLTVS 148
              GF+D+ I + IR  P++     EK+L PK++F Q++G   S+L + +S    +L   
Sbjct: 97  RSHGFTDSQISNIIRTFPRLLILDAEKSLAPKLQFLQSIGASSSELTETVSAVPKILGKR 156

Query: 149 LEKKLMPSVEILKNVLHKDKCNNGLLLVMRRCSYTIMRSPYKRLSVNINYLRSCGIVDSQ 208
             K L    + +K ++  DK +     + + C      S  +    N+  LR  G+    
Sbjct: 157 KGKSLSRYYDFVKVIIEADKSSK----LEKLCHSLPEGSKQENKIRNLLVLREMGVPQRL 216

Query: 209 L-SMLLKRQPGLFGKRESRLKDIVSMVVETGFSTNTKMFVHGLHAISSVSNATFNKKVEL 268
           L S+L+     + GK   + K+ +   VE GF   T  FV  L+ +  +S+     K   
Sbjct: 217 LFSLLISDAGDVCGK--EKFKESLKKAVEIGFDPTTATFVKALNVLYGLSDKGIENKFNA 276

Query: 269 ICSFGITEKECMRMFTSAPVLGRVLPRYRVLQIVKLKRLKKKHPKLIAILGLSDEDFLDK 328
               G+   +   MF   P +           + K ++  +   +    LG S ++FL  
Sbjct: 277 CKRLGLAVDDVWAMFKKWPNI-----------LTKSEKKIENSVETFLGLGFSRDEFL-M 323

The following BLAST results are available for this feature:

BLAST of CcUC07G137110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888519.1	3.5e-150	76.32	transcription termination factor MTERF5, chloroplastic-like [Benincasa hispida]	[more]
KAG7015351.1	1.1e-143	72.37	Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyr...	[more]
XP_022984673.1	2.4e-143	71.84	uncharacterized protein LOC111482884 isoform X1 [Cucurbita maxima] >XP_022984674...	[more]
XP_022984676.1	2.7e-142	72.11	uncharacterized protein LOC111482884 isoform X4 [Cucurbita maxima]	[more]
XP_023552362.1	4.5e-142	71.84	uncharacterized protein LOC111810052 isoform X3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC07G137110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVI3	1.8e-08	30.25	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	1.7e-06	26.21	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
F4IHL3	1.4e-05	28.08	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q84X53	7.1e-05	26.29	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]

BLAST of CcUC07G137110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JB80	1.2e-143	71.84	uncharacterized protein LOC111482884 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1J5Y4	1.3e-142	72.11	uncharacterized protein LOC111482884 isoform X4 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EN21	3.7e-142	71.58	uncharacterized protein LOC111435860 OS=Cucurbita moschata OX=3662 GN=LOC1114358...	[more]
A0A6J1END2	6.4e-142	71.58	uncharacterized protein LOC111436067 OS=Cucurbita moschata OX=3662 GN=LOC1114360...	[more]
A0A6J1C8W1	1.1e-130	68.24	uncharacterized protein LOC111008506 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CcUC07G137110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64950.1	1.4e-53	36.31	Mitochondrial transcription termination factor family protein	[more]
AT5G07900.1	2.8e-25	25.96	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	1.4e-24	25.58	Mitochondrial transcription termination factor family protein	[more]
AT3G46950.1	1.8e-16	24.05	Mitochondrial transcription termination factor family protein	[more]
AT1G62120.1	4.1e-16	25.49	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 130..162 e-value: 0.043 score: 23.0 coord: 205..235 e-value: 7.3 score: 15.6 coord: 94..125 e-value: 0.045 score: 22.9 coord: 169..200 e-value: 160.0 score: 10.1 coord: 284..315 e-value: 1600.0 score: 2.2 coord: 239..269 e-value: 1800.0 score: 1.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 81..282 e-value: 4.5E-23 score: 81.7
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 28..283 coord: 284..340
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 165..332 e-value: 4.9E-21 score: 77.0
None	No IPR available	PANTHER	PTHR13068:SF173	EMB\|CAB62602.1	coord: 28..283 coord: 284..340

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G137110.1	CcUC07G137110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding