CcUC04G075380 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G075380
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	RWP-RK domain-containing protein
Location	CicolChr04: 31000903 .. 31002311 (+)
RNA-Seq Expression	CcUC04G075380
Synteny	CcUC04G075380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTGAACCTCCCCTCTCATGGTCCACACCCTCCATTCTGTTCATACTGTCCAAAACAAACCACTTTTGGTTCGTTCTTTACTCTGATTGGAGTTTTCTCCTCTGTAAAATTGTCCTCAGTACAACAAAAAAGAATATCAATGAATGGAATTGGTTTCTGTAAAGAACAGCTTCTATGTAAATCATCCCTTTGGAGGATAGGATAAGAGATAGGCTGCAAAGAGCTTCAAAGTTTTCGCTGGTAACATTCCTAAGTTGGTTTTTTTCTCTTTTCATGGAAGTTTCTGGTACATGCATGGTCTGTATCTGCTTTATGAACTCTATTTGCTTCTCACTTTGTCCTGTTGTTTCTGCAAACATCAATTTGTTAGGTGATTACAGAGAGGGTTTTCGATTCAATACAGAACTTCAAAAAGTTGCAGATCAAATGAAGAATGCCCATCTATCTTGTTTTTCCAAGGGAGAGTTATGTGAACTAAAGAATGGCAAATCTCATCAACCAAAAAACTTGCCTCTACTCGACCAGGACCTTAACTTCCTTCCCTGTTGTTCAGTTGCTATATCTAAAGGGTCTGAGAATCAAATGAAAGAGTCCTGTGAACCAGGTTTGGCTTCAACTTTCTCTCTATAAAGGGAATGTATCAAACTTCTTTTTGAACATTAGAACTAGGAGTTCATGTCTATATTATGAAAGTTGATTAACCAGGTGGCGAATTGCCAGTTATTGCAGAAAAGAAAAGGAGGGCAACAAGTGAGCACATTGCTGGAATTACTTTATCAGATCTGGCTAAAAACTTTGGTGTTCCAATCACAGAAGCTTCAAGAAATCTAAATGTTGGATTAACAGTACTGAAAAGAAAATGCAGAGAATTCGGCATTCATCGGTGGCCGCACAGGAAGATAAAGTCCATTGATGGTCTAATCCGAGATCTTCAGGTTATTCCTTTCTTCCTACTTTGCATCTAAGACTTCATTGCAACCTAGAAAGGCACGTAGTTTGTTTATGGAAAAGGGTGCTTGTAGGAAGAAGCAAAGCATAGAGAGGAAGACCACAAAGCTTTGATGGCAGTGACAAAGAGGCAAATGATGTTGCAGAATGAACGAGAGAGCATCGAGAGGACACCATTTAGAGAGCTGGAGATTGAGACCAAGAGATTTAGGCAAGATGTTTTCAGGAGAAAGCATAAAGCTAGAGCTCTAGAAAGTCAGAGTCCATCAGTTTAGTTTGCAGCTAATTATATGCATGATATTGGACAAGATAAATAACTGGCAAAGTAGTATGCTTCTTTTTAATCTCACTATGACATACCTGATAAGAATTCTTGCAAGATCTGTACCAGCAATTTTCATATGGAACTTCTGTTAAAAATGCTATTTCCAATCATATTGTGTTTGAATAATTGCTACAA

mRNA sequence

AGTTGAACCTCCCCTCTCATGGTCCACACCCTCCATTCTGTTCATACTGTCCAAAACAAACCACTTTTGGTTCGTTCTTTACTCTGATTGGAGTTTTCTCCTCTGTAAAATTGTCCTCAGTACAACAAAAAAGAATATCAATGAATGGAATTGGTTTCTGTAAAGAACAGCTTCTATGTAAATCATCCCTTTGGAGGATAGGATAAGAGATAGGCTGCAAAGAGCTTCAAAGTTTTCGCTGGTAACATTCCTAAGTTGGTTTTTTTCTCTTTTCATGGAAGTTTCTGGTACATGCATGGTCTGTATCTGCTTTATGAACTCTATTTGCTTCTCACTTTGTCCTGTTGTTTCTGCAAACATCAATTTGTTAGGTGATTACAGAGAGGGTTTTCGATTCAATACAGAACTTCAAAAAGTTGCAGATCAAATGAAGAATGCCCATCTATCTTGTTTTTCCAAGGGAGAGTTATGTGAACTAAAGAATGGCAAATCTCATCAACCAAAAAACTTGCCTCTACTCGACCAGGACCTTAACTTCCTTCCCTGTTGTTCAGTTGCTATATCTAAAGGGTCTGAGAATCAAATGAAAGAGTCCTGTGAACCAGTTATTGCAGAAAAGAAAAGGAGGGCAACAAGTGAGCACATTGCTGGAATTACTTTATCAGATCTGGCTAAAAACTTTGGTGTTCCAATCACAGAAGCTTCAAGAAATCTAAATGTTGGATTAACAGTACTGAAAAGAAAATGCAGAGAATTCGGCATTCATCGGTGGCCGCACAGGAAGATAAAGTCCATTGATGGTCTAATCCGAGATCTTCAGGAAGAAGCAAAGCATAGAGAGGAAGACCACAAAGCTTTGATGGCAGTGACAAAGAGGCAAATGATGTTGCAGAATGAACGAGAGAGCATCGAGAGGACACCATTTAGAGAGCTGGAGATTGAGACCAAGAGATTTAGGCAAGATGTTTTCAGGAGAAAGCATAAAGCTAGAGCTCTAGAAAGTCAGAGTCCATCAGTTTAGTTTGCAGCTAATTATATGCATGATATTGGACAAGATAAATAACTGGCAAAGTAGTATGCTTCTTTTTAATCTCACTATGACATACCTGATAAGAATTCTTGCAAGATCTGTACCAGCAATTTTCATATGGAACTTCTGTTAAAAATGCTATTTCCAATCATATTGTGTTTGAATAATTGCTACAA

Coding sequence (CDS)

ATGGAAGTTTCTGGTACATGCATGGTCTGTATCTGCTTTATGAACTCTATTTGCTTCTCACTTTGTCCTGTTGTTTCTGCAAACATCAATTTGTTAGGTGATTACAGAGAGGGTTTTCGATTCAATACAGAACTTCAAAAAGTTGCAGATCAAATGAAGAATGCCCATCTATCTTGTTTTTCCAAGGGAGAGTTATGTGAACTAAAGAATGGCAAATCTCATCAACCAAAAAACTTGCCTCTACTCGACCAGGACCTTAACTTCCTTCCCTGTTGTTCAGTTGCTATATCTAAAGGGTCTGAGAATCAAATGAAAGAGTCCTGTGAACCAGTTATTGCAGAAAAGAAAAGGAGGGCAACAAGTGAGCACATTGCTGGAATTACTTTATCAGATCTGGCTAAAAACTTTGGTGTTCCAATCACAGAAGCTTCAAGAAATCTAAATGTTGGATTAACAGTACTGAAAAGAAAATGCAGAGAATTCGGCATTCATCGGTGGCCGCACAGGAAGATAAAGTCCATTGATGGTCTAATCCGAGATCTTCAGGAAGAAGCAAAGCATAGAGAGGAAGACCACAAAGCTTTGATGGCAGTGACAAAGAGGCAAATGATGTTGCAGAATGAACGAGAGAGCATCGAGAGGACACCATTTAGAGAGCTGGAGATTGAGACCAAGAGATTTAGGCAAGATGTTTTCAGGAGAAAGCATAAAGCTAGAGCTCTAGAAAGTCAGAGTCCATCAGTTTAG

Protein sequence

MEVSGTCMVCICFMNSICFSLCPVVSANINLLGDYREGFRFNTELQKVADQMKNAHLSCFSKGELCELKNGKSHQPKNLPLLDQDLNFLPCCSVAISKGSENQMKESCEPVIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDVFRRKHKARALESQSPSV

Homology

[Close]

BLAST of CcUC04G075380 vs. NCBI nr
Match: XP_038882834.1 (protein RKD5 isoform X2 [Benincasa hispida])

HSP 1 Score: 359.0 bits (920), Expect = 3.3e-95
Identity = 183/197 (92.89%), Postives = 189/197 (95.94%), Query Frame = 0


Query: 52  MKNAHLSCFSKGELCELKNGKSHQPKNLPLLDQDLNFLPCCSVAISKGSENQMKESCEPV 111
           MKNAHLS F KGELC+LKN K HQP+NLPLLDQDLNFLP CSVA+SKGSE++MKE CEPV
Sbjct: 1   MKNAHLSYFPKGELCQLKNSKFHQPRNLPLLDQDLNFLP-CSVAVSKGSESEMKEFCEPV 60

Query: 112 IAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI 171
           IA KKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI
Sbjct: 61  IAAKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI 120

Query: 172 KSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDV 231
           KSIDGLIRDLQEEAKHRE+DHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDV
Sbjct: 121 KSIDGLIRDLQEEAKHREDDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDV 180

Query: 232 FRRKHKARALESQSPSV 249
           FRRKHKARALESQS SV
Sbjct: 181 FRRKHKARALESQSSSV 196

[Close]

BLAST of CcUC04G075380 vs. NCBI nr
Match: XP_016899254.1 (PREDICTED: protein RKD5 [Cucumis melo] >KAA0025608.1 protein RKD5 [Cucumis melo var. makuwa] >TYK12483.1 protein RKD5 [Cucumis melo var. makuwa])

HSP 1 Score: 355.9 bits (912), Expect = 2.8e-94
Identity = 183/198 (92.42%), Postives = 188/198 (94.95%), Query Frame = 0


Query: 52  MKNAHLSCFSKGELCELKNGKSHQPKNLPLLDQDLNFLPCCSVAISKGSENQMKESC-EP 111
           MKN HLSCF  GELC+LKNGKSHQP+NLPLLDQDLNFLP CSV++SKGS NQM+ESC E 
Sbjct: 1   MKNPHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLP-CSVSVSKGSGNQMEESCDES 60

Query: 112 VIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRK 171
            IAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRK
Sbjct: 61  GIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRK 120

Query: 172 IKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQD 231
           IKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERE IERTPFRELE ETKRFRQD
Sbjct: 121 IKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELESETKRFRQD 180

Query: 232 VFRRKHKARALESQSPSV 249
           VFRRKHKARALESQSPSV
Sbjct: 181 VFRRKHKARALESQSPSV 197

[Close]

BLAST of CcUC04G075380 vs. NCBI nr
Match: XP_038882831.1 (protein RKD5 isoform X1 [Benincasa hispida] >XP_038882832.1 protein RKD5 isoform X1 [Benincasa hispida] >XP_038882833.1 protein RKD5 isoform X1 [Benincasa hispida])

HSP 1 Score: 352.8 bits (904), Expect = 2.4e-93
Identity = 183/202 (90.59%), Postives = 189/202 (93.56%), Query Frame = 0


Query: 52  MKNAHLSCFSKGELCELKNGKSHQPKNLPLLDQDLNFLPCCSVAISKGSENQMKESCE-- 111
           MKNAHLS F KGELC+LKN K HQP+NLPLLDQDLNFLP CSVA+SKGSE++MKE CE  
Sbjct: 1   MKNAHLSYFPKGELCQLKNSKFHQPRNLPLLDQDLNFLP-CSVAVSKGSESEMKEFCEPG 60

Query: 112 ---PVIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRW 171
              PVIA KKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRW
Sbjct: 61  GELPVIAAKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRW 120

Query: 172 PHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKR 231
           PHRKIKSIDGLIRDLQEEAKHRE+DHKALMAVTKRQMMLQNERESIERTPFRELEIETKR
Sbjct: 121 PHRKIKSIDGLIRDLQEEAKHREDDHKALMAVTKRQMMLQNERESIERTPFRELEIETKR 180

Query: 232 FRQDVFRRKHKARALESQSPSV 249
           FRQDVFRRKHKARALESQS SV
Sbjct: 181 FRQDVFRRKHKARALESQSSSV 201

[Close]

BLAST of CcUC04G075380 vs. NCBI nr
Match: XP_004134999.1 (protein RKD5 isoform X2 [Cucumis sativus])

HSP 1 Score: 350.5 bits (898), Expect = 1.2e-92
Identity = 179/197 (90.86%), Postives = 184/197 (93.40%), Query Frame = 0


Query: 52  MKNAHLSCFSKGELCELKNGKSHQPKNLPLLDQDLNFLPCCSVAISKGSENQMKESCEPV 111
           MKN HLSCF  GELC+LKNGKSHQP+NLPLLDQDLNFLP CSV++SK S NQM+ESC   
Sbjct: 1   MKNGHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLP-CSVSVSKESGNQMEESCASG 60

Query: 112 IAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI 171
           I EKKRRATSEHIA ITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI
Sbjct: 61  IVEKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI 120

Query: 172 KSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDV 231
           KSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERE IERTPFRELE ETKRFRQDV
Sbjct: 121 KSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDV 180

Query: 232 FRRKHKARALESQSPSV 249
           FRRKHKARALESQSPSV
Sbjct: 181 FRRKHKARALESQSPSV 196

[Close]

BLAST of CcUC04G075380 vs. NCBI nr
Match: XP_011658076.1 (protein RKD5 isoform X1 [Cucumis sativus] >KAE8647629.1 hypothetical protein Csa_003920 [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 8.4e-91
Identity = 179/202 (88.61%), Postives = 184/202 (91.09%), Query Frame = 0


Query: 52  MKNAHLSCFSKGELCELKNGKSHQPKNLPLLDQDLNFLPCCSVAISKGSENQMKESCEP- 111
           MKN HLSCF  GELC+LKNGKSHQP+NLPLLDQDLNFLP CSV++SK S NQM+ESC   
Sbjct: 1   MKNGHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLP-CSVSVSKESGNQMEESCASG 60

Query: 112 ----VIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRW 171
                I EKKRRATSEHIA ITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRW
Sbjct: 61  GELIGIVEKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRW 120

Query: 172 PHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKR 231
           PHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERE IERTPFRELE ETKR
Sbjct: 121 PHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKR 180

Query: 232 FRQDVFRRKHKARALESQSPSV 249
           FRQDVFRRKHKARALESQSPSV
Sbjct: 181 FRQDVFRRKHKARALESQSPSV 201

[Close]

BLAST of CcUC04G075380 vs. ExPASy Swiss-Prot
Match: O81791 (Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.8e-35
Identity = 89/194 (45.88%), Postives = 127/194 (65.46%), Query Frame = 0


Query: 70  NGKSHQPKNLPLLDQDLNFLPCCSV----AISKGSEN---------QMKESCEPVIAEKK 129
           N    +P+ L +L QDLN LP        ++++ +E+         Q +   +  I +KK
Sbjct: 173 NSDLPKPRKL-VLKQDLNCLPDSETESEESVNEKTEHSEFENDKTEQSESDAKTEILKKK 232

Query: 130 RRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDG 189
           +R  S H+A ++L +L+K F + I EASRNL VGLTVLK+KCREFGI RWPHRKIKS+D 
Sbjct: 233 KRTPSRHVAELSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDC 292

Query: 190 LIRDLQEEA-KHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDVFRRK 249
           LI DLQ EA K +E++  A MAV K+Q  L+ E+ +I + PF E+ IETK+FRQ+ F+++
Sbjct: 293 LIHDLQREAEKQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFRQENFKKR 352

[Close]

BLAST of CcUC04G075380 vs. ExPASy Swiss-Prot
Match: Q9M9U9 (Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 6.4e-17
Identity = 53/141 (37.59%), Postives = 83/141 (58.87%), Query Frame = 0


Query: 115 KKRRATSEHIAGITLS------DLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPH 174
           KKRR   E  +  ++S       ++  F +PIT+A+R LN+GLT+LK++CRE GI RWPH
Sbjct: 110 KKRRCREECFSSCSVSKTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPH 169

Query: 175 RKIKSIDGLIRDLQE-EAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRF 234
           RK+ S+  LI +++E E    EE+   L    ++   L+ E+++IE+ P  + E +TKR 
Sbjct: 170 RKLMSLQKLISNVKELEKMEGEENEDKLRNALEK---LEKEKKTIEKLPDLKFEDKTKRL 229

Query: 235 RQDVFRRKHKARALESQSPSV 249
           RQ  F+  HK +     S  +
Sbjct: 230 RQACFKANHKRKRRSGMSTPI 247

[Close]

BLAST of CcUC04G075380 vs. ExPASy Swiss-Prot
Match: Q9LVU8 (Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.4e-16
Identity = 57/167 (34.13%), Postives = 87/167 (52.10%), Query Frame = 0


Query: 76  PKNLPLLDQDLNFLPCCSVAISKGSENQ---MKESCEPVIAEKKRRATSEHIAGITLSDL 135
           P ++ LL Q+  F    S +     +N         E V  +KKR    +    + +S++
Sbjct: 94  PSDIHLLTQEPYFSSDSSSSSPLAIQNDGLISNVKVEKVTVKKKRNLKKKRQDKLEMSEI 153

Query: 136 AKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHREEDH 195
            + F  PI +A++ LNVGLTVLK++CRE GI+RWPHRK+KS++ LI++L+      E  +
Sbjct: 154 KQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKNLKNVGMEEEVKN 213

Query: 196 KALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDVFRRKHKAR 240
                       L+  R  IE+ P  EL   TK+ RQ  F+  +K R
Sbjct: 214 ------------LEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRR 248

[Close]

BLAST of CcUC04G075380 vs. ExPASy Swiss-Prot
Match: Q9CA66 (Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.4e-16
Identity = 54/147 (36.73%), Postives = 85/147 (57.82%), Query Frame = 0


Query: 105 KESCEPVIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIH 164
           +E    +I++     TS     ++   +++ F +PIT+A+  LNVGLT+LKR+CRE GI 
Sbjct: 113 REHSVRIISDITTYTTSSAPTTLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIR 172

Query: 165 RWPHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIET 224
           RWPHRK+ S++ LI +++E  K   E++   +       ML+ E+ +IE  P  E + +T
Sbjct: 173 RWPHRKLMSLNTLISNVKELQKMEGEENAEKLQDALE--MLEKEKRTIEDLPDLEFKDKT 232

Query: 225 KRFRQDVFRRKH---KARALESQSPSV 249
           KR RQ  F+  H   K R+L+S    V
Sbjct: 233 KRLRQACFKANHKRKKKRSLKSDQSQV 257

[Close]

BLAST of CcUC04G075380 vs. ExPASy Swiss-Prot
Match: Q9FGD1 (Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.4e-16
Identity = 57/148 (38.51%), Postives = 82/148 (55.41%), Query Frame = 0


Query: 102 NQMKESCEPVIAEKKRRATSEHIAGITLSDLAKN-FGVPITEASRNLNVGLTVLKRKCRE 161
           N MKE         KRR   + +      ++ K  F +PIT+A++ LN+G+T+LK++CRE
Sbjct: 133 NTMKEKTSQKRIIMKRRYREDGVINNMSREMMKQYFYMPITKAAKELNIGVTLLKKRCRE 192

Query: 162 FGIHRWPHRKIKSIDGLI---RDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPF 221
            GI RWPHRK+ S++ LI   +DL    K R    K   A+     +L+ E++ IE  P 
Sbjct: 193 LGIPRWPHRKLTSLNALIANLKDLLGNTKGRTPKSKLRNALE----LLEMEKKMIEEVPD 252

Query: 222 RELEIETKRFRQDVFRRKHKARALESQS 246
            E   +TKR RQ  F+ K+K R L S S
Sbjct: 253 LEFGDKTKRLRQACFKAKYKRRRLFSSS 276

[Close]

BLAST of CcUC04G075380 vs. ExPASy TrEMBL
Match: A0A5A7SHH9 (Protein RKD5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00600 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.4e-94
Identity = 183/198 (92.42%), Postives = 188/198 (94.95%), Query Frame = 0


Query: 52  MKNAHLSCFSKGELCELKNGKSHQPKNLPLLDQDLNFLPCCSVAISKGSENQMKESC-EP 111
           MKN HLSCF  GELC+LKNGKSHQP+NLPLLDQDLNFLP CSV++SKGS NQM+ESC E 
Sbjct: 1   MKNPHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLP-CSVSVSKGSGNQMEESCDES 60

Query: 112 VIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRK 171
            IAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRK
Sbjct: 61  GIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRK 120

Query: 172 IKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQD 231
           IKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERE IERTPFRELE ETKRFRQD
Sbjct: 121 IKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELESETKRFRQD 180

Query: 232 VFRRKHKARALESQSPSV 249
           VFRRKHKARALESQSPSV
Sbjct: 181 VFRRKHKARALESQSPSV 197

[Close]

BLAST of CcUC04G075380 vs. ExPASy TrEMBL
Match: A0A1S4DTD9 (protein RKD5 OS=Cucumis melo OX=3656 GN=LOC103485193 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.4e-94
Identity = 183/198 (92.42%), Postives = 188/198 (94.95%), Query Frame = 0


Query: 52  MKNAHLSCFSKGELCELKNGKSHQPKNLPLLDQDLNFLPCCSVAISKGSENQMKESC-EP 111
           MKN HLSCF  GELC+LKNGKSHQP+NLPLLDQDLNFLP CSV++SKGS NQM+ESC E 
Sbjct: 1   MKNPHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLP-CSVSVSKGSGNQMEESCDES 60

Query: 112 VIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRK 171
            IAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRK
Sbjct: 61  GIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRK 120

Query: 172 IKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQD 231
           IKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERE IERTPFRELE ETKRFRQD
Sbjct: 121 IKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELESETKRFRQD 180

Query: 232 VFRRKHKARALESQSPSV 249
           VFRRKHKARALESQSPSV
Sbjct: 181 VFRRKHKARALESQSPSV 197

[Close]

BLAST of CcUC04G075380 vs. ExPASy TrEMBL
Match: A0A0A0KGY8 (RWP-RK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G509650 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 5.7e-93
Identity = 179/197 (90.86%), Postives = 184/197 (93.40%), Query Frame = 0


Query: 52  MKNAHLSCFSKGELCELKNGKSHQPKNLPLLDQDLNFLPCCSVAISKGSENQMKESCEPV 111
           MKN HLSCF  GELC+LKNGKSHQP+NLPLLDQDLNFLP CSV++SK S NQM+ESC   
Sbjct: 1   MKNGHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLP-CSVSVSKESGNQMEESCASG 60

Query: 112 IAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI 171
           I EKKRRATSEHIA ITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI
Sbjct: 61  IVEKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI 120

Query: 172 KSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDV 231
           KSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERE IERTPFRELE ETKRFRQDV
Sbjct: 121 KSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDV 180

Query: 232 FRRKHKARALESQSPSV 249
           FRRKHKARALESQSPSV
Sbjct: 181 FRRKHKARALESQSPSV 196

[Close]

BLAST of CcUC04G075380 vs. ExPASy TrEMBL
Match: A0A6J1BWV1 (protein RKD5 OS=Momordica charantia OX=3673 GN=LOC111005457 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 4.7e-79
Identity = 163/195 (83.59%), Postives = 171/195 (87.69%), Query Frame = 0


Query: 61  SKGELCE--LKNGKSHQPKNLPLLDQDLNFLPCCSVAISKGSENQMKESCEP-----VIA 120
           S  E C   L NGK HQP+NLPLL+QDLNFLP CS A S+GSENQMKES EP     VIA
Sbjct: 4   SSNEECPSCLNNGKFHQPRNLPLLEQDLNFLP-CSAAASEGSENQMKESYEPGGELLVIA 63

Query: 121 EKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKS 180
           EKK+RATSEHIAGITLSDLAK F +PITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKS
Sbjct: 64  EKKKRATSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKS 123

Query: 181 IDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDVFR 240
           IDGLIRDLQEEAKHREEDHKALMAVTKRQ MLQ+ERESIE TPFRELE ET+RFRQDVFR
Sbjct: 124 IDGLIRDLQEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFR 183

Query: 241 RKHKARALESQSPSV 249
           R+HKARALESQ  SV
Sbjct: 184 RRHKARALESQGTSV 197

[Close]

BLAST of CcUC04G075380 vs. ExPASy TrEMBL
Match: A0A6J1GEC7 (protein RKD5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453407 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.4e-75
Identity = 160/208 (76.92%), Postives = 173/208 (83.17%), Query Frame = 0


Query: 41  FNTELQKVADQMKNAHLSCFSKGELCELKNGKSHQPKNLPLLDQDLNFLPC-CSVAISKG 100
           F+TE   VAD M +++LSCF K     L + K         L QDLNFLPC  S+A+SKG
Sbjct: 6   FSTEFPNVADPMHDSYLSCFPK-----LNDEK--------FLHQDLNFLPCSSSMAVSKG 65

Query: 101 SE-NQMKESCEPVIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKC 160
            E +QMKE CEPV+A+KKRRATSEHIAGI LSDLAK F VPITEASR+LNVGLTVLKRKC
Sbjct: 66  PEIHQMKELCEPVLAKKKRRATSEHIAGIALSDLAKYFDVPITEASRSLNVGLTVLKRKC 125

Query: 161 REFGIHRWPHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFR 220
           REFGIHRWPHRKIKSIDGLIRDLQEEAKHREED KALMAVTKRQMMLQNERESIERTPFR
Sbjct: 126 REFGIHRWPHRKIKSIDGLIRDLQEEAKHREEDQKALMAVTKRQMMLQNERESIERTPFR 185

Query: 221 ELEIETKRFRQDVFRRKHKARALESQSP 247
           ELE ETKRFRQDVF+R+HKARAL S SP
Sbjct: 186 ELESETKRFRQDVFKRRHKARALVSHSP 200

[Close]

BLAST of CcUC04G075380 vs. TAIR 10
Match: AT4G35590.1 (RWP-RK domain-containing protein )

HSP 1 Score: 149.1 bits (375), Expect = 4.8e-36
Identity = 89/194 (45.88%), Postives = 127/194 (65.46%), Query Frame = 0


Query: 70  NGKSHQPKNLPLLDQDLNFLPCCSV----AISKGSEN---------QMKESCEPVIAEKK 129
           N    +P+ L +L QDLN LP        ++++ +E+         Q +   +  I +KK
Sbjct: 173 NSDLPKPRKL-VLKQDLNCLPDSETESEESVNEKTEHSEFENDKTEQSESDAKTEILKKK 232

Query: 130 RRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDG 189
           +R  S H+A ++L +L+K F + I EASRNL VGLTVLK+KCREFGI RWPHRKIKS+D 
Sbjct: 233 KRTPSRHVAELSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDC 292

Query: 190 LIRDLQEEA-KHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDVFRRK 249
           LI DLQ EA K +E++  A MAV K+Q  L+ E+ +I + PF E+ IETK+FRQ+ F+++
Sbjct: 293 LIHDLQREAEKQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFRQENFKKR 352

[Close]

BLAST of CcUC04G075380 vs. TAIR 10
Match: AT1G18790.1 (RWP-RK domain-containing protein )

HSP 1 Score: 89.4 bits (220), Expect = 4.5e-18
Identity = 53/141 (37.59%), Postives = 83/141 (58.87%), Query Frame = 0


Query: 115 KKRRATSEHIAGITLS------DLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPH 174
           KKRR   E  +  ++S       ++  F +PIT+A+R LN+GLT+LK++CRE GI RWPH
Sbjct: 110 KKRRCREECFSSCSVSKTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPH 169

Query: 175 RKIKSIDGLIRDLQE-EAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRF 234
           RK+ S+  LI +++E E    EE+   L    ++   L+ E+++IE+ P  + E +TKR 
Sbjct: 170 RKLMSLQKLISNVKELEKMEGEENEDKLRNALEK---LEKEKKTIEKLPDLKFEDKTKRL 229

Query: 235 RQDVFRRKHKARALESQSPSV 249
           RQ  F+  HK +     S  +
Sbjct: 230 RQACFKANHKRKRRSGMSTPI 247

[Close]

BLAST of CcUC04G075380 vs. TAIR 10
Match: AT5G53040.1 (RWP-RK domain-containing protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-17
Identity = 57/167 (34.13%), Postives = 87/167 (52.10%), Query Frame = 0


Query: 76  PKNLPLLDQDLNFLPCCSVAISKGSENQ---MKESCEPVIAEKKRRATSEHIAGITLSDL 135
           P ++ LL Q+  F    S +     +N         E V  +KKR    +    + +S++
Sbjct: 94  PSDIHLLTQEPYFSSDSSSSSPLAIQNDGLISNVKVEKVTVKKKRNLKKKRQDKLEMSEI 153

Query: 136 AKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHREEDH 195
            + F  PI +A++ LNVGLTVLK++CRE GI+RWPHRK+KS++ LI++L+      E  +
Sbjct: 154 KQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKNLKNVGMEEEVKN 213

Query: 196 KALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDVFRRKHKAR 240
                       L+  R  IE+ P  EL   TK+ RQ  F+  +K R
Sbjct: 214 ------------LEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRR 248

[Close]

BLAST of CcUC04G075380 vs. TAIR 10
Match: AT1G74480.1 (RWP-RK domain-containing protein )

HSP 1 Score: 86.3 bits (212), Expect = 3.8e-17
Identity = 54/147 (36.73%), Postives = 85/147 (57.82%), Query Frame = 0


Query: 105 KESCEPVIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIH 164
           +E    +I++     TS     ++   +++ F +PIT+A+  LNVGLT+LKR+CRE GI 
Sbjct: 113 REHSVRIISDITTYTTSSAPTTLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIR 172

Query: 165 RWPHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIET 224
           RWPHRK+ S++ LI +++E  K   E++   +       ML+ E+ +IE  P  E + +T
Sbjct: 173 RWPHRKLMSLNTLISNVKELQKMEGEENAEKLQDALE--MLEKEKRTIEDLPDLEFKDKT 232

Query: 225 KRFRQDVFRRKH---KARALESQSPSV 249
           KR RQ  F+  H   K R+L+S    V
Sbjct: 233 KRLRQACFKANHKRKKKRSLKSDQSQV 257

[Close]

BLAST of CcUC04G075380 vs. TAIR 10
Match: AT5G66990.1 (RWP-RK domain-containing protein )

HSP 1 Score: 86.3 bits (212), Expect = 3.8e-17
Identity = 57/148 (38.51%), Postives = 82/148 (55.41%), Query Frame = 0


Query: 102 NQMKESCEPVIAEKKRRATSEHIAGITLSDLAKN-FGVPITEASRNLNVGLTVLKRKCRE 161
           N MKE         KRR   + +      ++ K  F +PIT+A++ LN+G+T+LK++CRE
Sbjct: 133 NTMKEKTSQKRIIMKRRYREDGVINNMSREMMKQYFYMPITKAAKELNIGVTLLKKRCRE 192

Query: 162 FGIHRWPHRKIKSIDGLI---RDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPF 221
            GI RWPHRK+ S++ LI   +DL    K R    K   A+     +L+ E++ IE  P 
Sbjct: 193 LGIPRWPHRKLTSLNALIANLKDLLGNTKGRTPKSKLRNALE----LLEMEKKMIEEVPD 252

Query: 222 RELEIETKRFRQDVFRRKHKARALESQS 246
            E   +TKR RQ  F+ K+K R L S S
Sbjct: 253 LEFGDKTKRLRQACFKAKYKRRRLFSSS 276

The following BLAST results are available for this feature:

BLAST of CcUC04G075380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882834.1	3.3e-95	92.89	protein RKD5 isoform X2 [Benincasa hispida]	[more]
XP_016899254.1	2.8e-94	92.42	PREDICTED: protein RKD5 [Cucumis melo] >KAA0025608.1 protein RKD5 [Cucumis melo ...	[more]
XP_038882831.1	2.4e-93	90.59	protein RKD5 isoform X1 [Benincasa hispida] >XP_038882832.1 protein RKD5 isoform...	[more]
XP_004134999.1	1.2e-92	90.86	protein RKD5 isoform X2 [Cucumis sativus]	[more]
XP_011658076.1	8.4e-91	88.61	protein RKD5 isoform X1 [Cucumis sativus] >KAE8647629.1 hypothetical protein Csa...	[more]

BLAST of CcUC04G075380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81791	6.8e-35	45.88	Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1	[more]
Q9M9U9	6.4e-17	37.59	Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1	[more]
Q9LVU8	2.4e-16	34.13	Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1	[more]
Q9CA66	5.4e-16	36.73	Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1	[more]
Q9FGD1	5.4e-16	38.51	Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1	[more]

BLAST of CcUC04G075380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SHH9	1.4e-94	92.42	Protein RKD5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00600 P...	[more]
A0A1S4DTD9	1.4e-94	92.42	protein RKD5 OS=Cucumis melo OX=3656 GN=LOC103485193 PE=4 SV=1	[more]
A0A0A0KGY8	5.7e-93	90.86	RWP-RK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G509650 PE=4...	[more]
A0A6J1BWV1	4.7e-79	83.59	protein RKD5 OS=Momordica charantia OX=3673 GN=LOC111005457 PE=4 SV=1	[more]
A0A6J1GEC7	2.4e-75	76.92	protein RKD5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453407 PE=4 ...	[more]

BLAST of CcUC04G075380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35590.1	4.8e-36	45.88	RWP-RK domain-containing protein	[more]
AT1G18790.1	4.5e-18	37.59	RWP-RK domain-containing protein	[more]
AT5G53040.1	1.7e-17	34.13	RWP-RK domain-containing protein	[more]
AT1G74480.1	3.8e-17	36.73	RWP-RK domain-containing protein	[more]
AT5G66990.1	3.8e-17	38.51	RWP-RK domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 178..198
None	No IPR available	PANTHER	PTHR46373:SF12	PROTEIN RKD5	coord: 44..244
IPR003035	RWP-RK domain	PFAM	PF02042	RWP-RK	coord: 127..174 e-value: 2.9E-21 score: 75.2
IPR003035	RWP-RK domain	PROSITE	PS51519	RWP_RK	coord: 109..194 score: 17.995958
IPR044607	Transcription factor RKD-like	PANTHER	PTHR46373	PROTEIN RKD4	coord: 44..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G075380.1	CcUC04G075380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity