CcUC10G186530 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATCGATACAGACTTTTTCTACCACAAAAATCACAATCTTCTTTCTCTTTCGTTTTTCTCCAAATCCATGTCCTCCAAGAAGATCACTCTAAAGAGCTCCGATGGCGACTCTTTCGAAGTCGACGAGGCCGTTGCCCTCGAGTCTCAGACCATCCGCCACATGATCGAGGACGATTGCGCCGATAATGGCATCCCTCTTCCCAACGTCACTAGCAAGATCCTCGCCAAGGTCATCGAGTACTGCCACAAGCACGTCGACGCTTCCTCCCCCGATCACCGCCTCTCCGAAGACGACCTCAAAGCCTGGGACCGCGACTTCGTTAATGTCGACCAGGCCACTCTTTTCGATCTCATTCTGGTAAAACCTTTTCTTCCCGCCTTAGATCGATGGGCATCGATCCACTTGATTATCTAGGGTTTACCTGTTGGGTATGATATATATATATATATATATATATATATTCAAGAATCAACATTAGAGATTCTTCTGAATCTTTGATTCTGCAAACAATTGCTTTCATGTTTGTAATTGTGCTCTTAGGTGTCTGTAATGTTTGATGTTTTAGAATTGGAACGTTGGTCTTAAAGGAAAATTCTACTGGAAATTATTTAGTATTGTAGTTGTCTATTGTTGATCAATTGCTATGGGGTCTAAATAATGGTAAGTAATTCAGTATGATATGTATGGTCTTTTCCCTTTGATGAATGAAGCCGGTGATTTTGCTGAAATTGGTATTACCGGACATCTATATCTGGCGTCGTTGTCATATTTTTCTCTTTAAGAAATCGAACTTCCATTGAAAAGAAGAAATGAAAGGATACAAGAGCAACCAACAAAACAAGCTTCCAAAAAAGAGGAGTGTAAAACTAACTACAGAAAGGACACCAATCCAAAAGACCGAGACCAATATCGTAATTACACAACGGTCTAATGACCAACGTCCAAACGGAAACATTAAACCTCACCAACTCTCAAGCTTGCTTACAATAACAAAACATTCTACTCCCTGAAAAGACAGCTCAAAACCACCTTCTCCAACAAATAACAACCATCCCTATTTCGAGCTCCATGAATCCTAAAAGAACTCTTCACCGATTCCATAGGAAATTGGCGAACTGCACTCACACAACAAATGACCCAGATCCTCCTGATGCCTCATGCAAAACACCATTGCAAACCCAAGATGAAGGAGGCATAACTTCAGACATAATCCAAGTATCGACTCTCTCTCTGTCAAACTTGCCTAGCAAAAACCTTAACCTTTTCTGGAACTTTTATCTTCCTCAAAGAGGAGAAGATTAAAGCCTTTGGAGCACCCCATTAGGGGACCACCTCCCGACATCCTTTCTCCAGGATCAACAAGGAGATCCGCAGGATGCAACTTCATTGTCAAATGGTTGTAGCTTAGGTTAATGTTGATAAACTTGATTTGTTTTCCATGGTTCTACATGTCGAGAACTTTGATTTACCATATTATACATTTAAGCTGTGTTCTTGCAGTGTCTTGTTTCATTATTTCAATGGAGAGACTCGCTTCCTTTTTTTTTTTACTATTATTGTTGTTCATAGTCGTTTCTTGATTTGGCGCCATGTAAAATTCTCTCCTTCATTCTACAATGCAGGCTGCAAATTTTCTGAACATCAAGAGCTTGTTAGACCTGACATGTCAGACTGTAGCTGACATGATCAAGGGAAAGACCCCAGAGGAGATCCGAAAGACCTTTAACATCAAGAACGACTTCACACCGGAGGAAGAGGAGGAAGTTCGCAGGGAGAATCAGTGGGCTTTTGAATGACTTGTGACTTAAGGATCTTGATCAATAAGATCTGCACATGATAGTAGTATATAAGCACTTCTTTTTCGTTCTCTGTGGTATTCACATTGTTTATGAAATATTTCTGCCTGCTTGAACAATCTAACCACAATTGTGTAAACT AATCGATACAGACTTTTTCTACCACAAAAATCACAATCTTCTTTCTCTTTCGTTTTTCTCCAAATCCATGTCCTCCAAGAAGATCACTCTAAAGAGCTCCGATGGCGACTCTTTCGAAGTCGACGAGGCCGTTGCCCTCGAGTCTCAGACCATCCGCCACATGATCGAGGACGATTGCGCCGATAATGGCATCCCTCTTCCCAACGTCACTAGCAAGATCCTCGCCAAGGTCATCGAGTACTGCCACAAGCACGTCGACGCTTCCTCCCCCGATCACCGCCTCTCCGAAGACGACCTCAAAGCCTGGGACCGCGACTTCGTTAATGTCGACCAGGCCACTCTTTTCGATCTCATTCTGGCTGCAAATTTTCTGAACATCAAGAGCTTGTTAGACCTGACATGTCAGACTGTAGCTGACATGATCAAGGGAAAGACCCCAGAGGAGATCCGAAAGACCTTTAACATCAAGAACGACTTCACACCGGAGGAAGAGGAGGAAGTTCGCAGGGAGAATCAGTGGGCTTTTGAATGACTTGTGACTTAAGGATCTTGATCAATAAGATCTGCACATGATAGTAGTATATAAGCACTTCTTTTTCGTTCTCTGTGGTATTCACATTGTTTATGAAATATTTCTGCCTGCTTGAACAATCTAACCACAATTGTGTAAACT ATGTCCTCCAAGAAGATCACTCTAAAGAGCTCCGATGGCGACTCTTTCGAAGTCGACGAGGCCGTTGCCCTCGAGTCTCAGACCATCCGCCACATGATCGAGGACGATTGCGCCGATAATGGCATCCCTCTTCCCAACGTCACTAGCAAGATCCTCGCCAAGGTCATCGAGTACTGCCACAAGCACGTCGACGCTTCCTCCCCCGATCACCGCCTCTCCGAAGACGACCTCAAAGCCTGGGACCGCGACTTCGTTAATGTCGACCAGGCCACTCTTTTCGATCTCATTCTGGCTGCAAATTTTCTGAACATCAAGAGCTTGTTAGACCTGACATGTCAGACTGTAGCTGACATGATCAAGGGAAAGACCCCAGAGGAGATCCGAAAGACCTTTAACATCAAGAACGACTTCACACCGGAGGAAGAGGAGGAAGTTCGCAGGGAGAATCAGTGGGCTTTTGAATGA MSSKKITLKSSDGDSFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYCHKHVDASSPDHRLSEDDLKAWDRDFVNVDQATLFDLILAANFLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE Homology
BLAST of CcUC10G186530 vs. NCBI nr
Match: XP_022965297.1 (SKP1-like protein 1A [Cucurbita maxima] >KAG6577790.1 SKP1-like protein 1A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015829.1 SKP1-like protein 1A [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 290.8 bits (743), Expect = 6.9e-75 Identity = 145/153 (94.77%), Postives = 150/153 (98.04%), Query Frame = 0
BLAST of CcUC10G186530 vs. NCBI nr
Match: XP_038903121.1 (SKP1-like protein 1A [Benincasa hispida]) HSP 1 Score: 289.7 bits (740), Expect = 1.5e-74 Identity = 146/153 (95.42%), Postives = 149/153 (97.39%), Query Frame = 0
BLAST of CcUC10G186530 vs. NCBI nr
Match: XP_022923340.1 (SKP1-like protein 1A [Cucurbita moschata]) HSP 1 Score: 289.3 bits (739), Expect = 2.0e-74 Identity = 144/153 (94.12%), Postives = 149/153 (97.39%), Query Frame = 0
BLAST of CcUC10G186530 vs. NCBI nr
Match: XP_023553541.1 (SKP1-like protein 1A [Cucurbita pepo subsp. pepo]) HSP 1 Score: 287.0 bits (733), Expect = 9.9e-74 Identity = 144/153 (94.12%), Postives = 149/153 (97.39%), Query Frame = 0
BLAST of CcUC10G186530 vs. NCBI nr
Match: CAB4287843.1 (unnamed protein product [Prunus armeniaca] >CAB4318214.1 unnamed protein product [Prunus armeniaca]) HSP 1 Score: 284.6 bits (727), Expect = 4.9e-73 Identity = 141/153 (92.16%), Postives = 149/153 (97.39%), Query Frame = 0
BLAST of CcUC10G186530 vs. ExPASy Swiss-Prot
Match: Q39255 (SKP1-like protein 1A OS=Arabidopsis thaliana OX=3702 GN=SKP1A PE=1 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 9.3e-67 Identity = 127/160 (79.38%), Postives = 142/160 (88.75%), Query Frame = 0
BLAST of CcUC10G186530 vs. ExPASy Swiss-Prot
Match: Q9FHW7 (SKP1-like protein 1B OS=Arabidopsis thaliana OX=3702 GN=SKP1B PE=1 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 1.1e-64 Identity = 124/167 (74.25%), Postives = 138/167 (82.63%), Query Frame = 0
BLAST of CcUC10G186530 vs. ExPASy Swiss-Prot
Match: Q6PL11 (SKP1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP1 PE=1 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 3.3e-64 Identity = 129/166 (77.71%), Postives = 139/166 (83.73%), Query Frame = 0
BLAST of CcUC10G186530 vs. ExPASy Swiss-Prot
Match: Q651E8 (SKP1-like protein 20 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP20 PE=1 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 1.2e-58 Identity = 120/165 (72.73%), Postives = 134/165 (81.21%), Query Frame = 0
BLAST of CcUC10G186530 vs. ExPASy Swiss-Prot
Match: O49484 (SKP1-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=ASK11 PE=1 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 4.6e-58 Identity = 114/155 (73.55%), Postives = 133/155 (85.81%), Query Frame = 0
BLAST of CcUC10G186530 vs. ExPASy TrEMBL
Match: A0A6J1HJY3 (SKP1-like protein OS=Cucurbita maxima OX=3661 GN=LOC111465205 PE=3 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 3.3e-75 Identity = 145/153 (94.77%), Postives = 150/153 (98.04%), Query Frame = 0
BLAST of CcUC10G186530 vs. ExPASy TrEMBL
Match: A0A6J1EBI5 (SKP1-like protein OS=Cucurbita moschata OX=3662 GN=LOC111431062 PE=3 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 9.7e-75 Identity = 144/153 (94.12%), Postives = 149/153 (97.39%), Query Frame = 0
BLAST of CcUC10G186530 vs. ExPASy TrEMBL
Match: A0A6J5VI66 (SKP1-like protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS45864 PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 2.4e-73 Identity = 141/153 (92.16%), Postives = 149/153 (97.39%), Query Frame = 0
BLAST of CcUC10G186530 vs. ExPASy TrEMBL
Match: A0A6P5SPM9 (SKP1-like protein OS=Prunus avium OX=42229 GN=LOC110758167 PE=3 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 4.1e-73 Identity = 141/153 (92.16%), Postives = 148/153 (96.73%), Query Frame = 0
BLAST of CcUC10G186530 vs. ExPASy TrEMBL
Match: A0A5E4E5B6 (SKP1-like protein OS=Prunus dulcis OX=3755 GN=ALMOND_2B008750 PE=3 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 5.3e-73 Identity = 140/153 (91.50%), Postives = 149/153 (97.39%), Query Frame = 0
BLAST of CcUC10G186530 vs. TAIR 10
Match: AT1G75950.1 (S phase kinase-associated protein 1 ) HSP 1 Score: 254.2 bits (648), Expect = 6.6e-68 Identity = 127/160 (79.38%), Postives = 142/160 (88.75%), Query Frame = 0
BLAST of CcUC10G186530 vs. TAIR 10
Match: AT5G42190.1 (E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein ) HSP 1 Score: 247.3 bits (630), Expect = 8.1e-66 Identity = 124/167 (74.25%), Postives = 138/167 (82.63%), Query Frame = 0
BLAST of CcUC10G186530 vs. TAIR 10
Match: AT4G34210.1 (SKP1-like 11 ) HSP 1 Score: 225.3 bits (573), Expect = 3.3e-59 Identity = 114/155 (73.55%), Postives = 133/155 (85.81%), Query Frame = 0
BLAST of CcUC10G186530 vs. TAIR 10
Match: AT4G34470.1 (SKP1-like 12 ) HSP 1 Score: 224.2 bits (570), Expect = 7.3e-59 Identity = 113/155 (72.90%), Postives = 132/155 (85.16%), Query Frame = 0
BLAST of CcUC10G186530 vs. TAIR 10
Match: AT1G20140.1 (SKP1-like 4 ) HSP 1 Score: 215.3 bits (547), Expect = 3.4e-56 Identity = 108/160 (67.50%), Postives = 128/160 (80.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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