Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCACAACTATGGTTGCTTCCCCTTCCAACGATAGTTTCCGCATGAATCCTCTTCCGATCATAGATCTCCGTCTCCTCTCTCAATCCGAGCTCTATTGTCTTTCTCGTTTCTCCTCCTCATCCTCTTCCTCATCTTCAACCTCCCAATCCAACAACGAAGACGACGTTCTAATCCCCAAAATTGATCGATCCGTCTTCAATGAGTCCGCCGGTAGCCGAAAACAAACCTATTCTCGCCTGCGTCTAGCCCCTCGCAAACCCCAATTTTCTTCCTCTTCATCCTCTTCCACAATTCGCCCTCAATCCCCCGACCGCCTTGATACAGAGAGCGCTCAAATTGTTACTCTATTTAAGCAACTCTTCGTTGGAGATTCTCATTGTGCCGTCAATGATAGCTACGGCGACGGAGATGAGGACCTGGTACTTGTTAACCACATTTACGATGAATCGGTACCTGATTCTTCCTACGCTATTTTCCAGAGTATTCCTGTTGATATTATTGATAGCAGTTACGCCCCGATTAAGCGGCGGAGAGGTCGACCGCGGAAGGATAGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTTCGGAATTCAAAAGCGGATGCGATAAATCGGCGGCGGCGGAGGAGGAGATCGTAATGGTAATGCTGTGA
mRNA sequence
ATGGCTTCCACAACTATGGTTGCTTCCCCTTCCAACGATAGTTTCCGCATGAATCCTCTTCCGATCATAGATCTCCGTCTCCTCTCTCAATCCGAGCTCTATTGTCTTTCTCGTTTCTCCTCCTCATCCTCTTCCTCATCTTCAACCTCCCAATCCAACAACGAAGACGACGTTCTAATCCCCAAAATTGATCGATCCGTCTTCAATGAGTCCGCCGGTAGCCGAAAACAAACCTATTCTCGCCTGCGTCTAGCCCCTCGCAAACCCCAATTTTCTTCCTCTTCATCCTCTTCCACAATTCGCCCTCAATCCCCCGACCGCCTTGATACAGAGAGCGCTCAAATTGTTACTCTATTTAAGCAACTCTTCGTTGGAGATTCTCATTGTGCCGTCAATGATAGCTACGGCGACGGAGATGAGGACCTGGTACTTGTTAACCACATTTACGATGAATCGGTACCTGATTCTTCCTACGCTATTTTCCAGAGTATTCCTGTTGATATTATTGATAGCAGTTACGCCCCGATTAAGCGGCGGAGAGGTCGACCGCGGAAGGATAGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTTCGGAATTCAAAAGCGGATGCGATAAATCGGCGGCGGCGGAGGAGGAGATCGTAATGGTAATGCTGTGA
Coding sequence (CDS)
ATGGCTTCCACAACTATGGTTGCTTCCCCTTCCAACGATAGTTTCCGCATGAATCCTCTTCCGATCATAGATCTCCGTCTCCTCTCTCAATCCGAGCTCTATTGTCTTTCTCGTTTCTCCTCCTCATCCTCTTCCTCATCTTCAACCTCCCAATCCAACAACGAAGACGACGTTCTAATCCCCAAAATTGATCGATCCGTCTTCAATGAGTCCGCCGGTAGCCGAAAACAAACCTATTCTCGCCTGCGTCTAGCCCCTCGCAAACCCCAATTTTCTTCCTCTTCATCCTCTTCCACAATTCGCCCTCAATCCCCCGACCGCCTTGATACAGAGAGCGCTCAAATTGTTACTCTATTTAAGCAACTCTTCGTTGGAGATTCTCATTGTGCCGTCAATGATAGCTACGGCGACGGAGATGAGGACCTGGTACTTGTTAACCACATTTACGATGAATCGGTACCTGATTCTTCCTACGCTATTTTCCAGAGTATTCCTGTTGATATTATTGATAGCAGTTACGCCCCGATTAAGCGGCGGAGAGGTCGACCGCGGAAGGATAGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTTCGGAATTCAAAAGCGGATGCGATAAATCGGCGGCGGCGGAGGAGGAGATCGTAATGGTAATGCTGTGA
Protein sequence
MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAASEFKSGCDKSAAAEEEIVMVML
Homology
BLAST of CcUC08G155170.1 vs. NCBI nr
Match:
XP_038885026.1 (methyl-CpG-binding domain-containing protein 8 isoform X2 [Benincasa hispida])
HSP 1 Score: 400.6 bits (1028), Expect = 8.8e-108
Identity = 217/225 (96.44%), Postives = 217/225 (96.44%), Query Frame = 0
Query: 1 MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60
MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI
Sbjct: 1 MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60
Query: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120
PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK
Sbjct: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120
Query: 121 QLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180
QLFVGD HCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR
Sbjct: 121 QLFVGDPHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180
Query: 181 GRPRKDSNRFAQSNGNAASEFKSGCDKSAAA-----EEEIVMVML 221
GRPRKDSNRFAQSNGNAA EFKSGCDK AAA EEEIVMVML
Sbjct: 181 GRPRKDSNRFAQSNGNAAPEFKSGCDKPAAAAAEEEEEEIVMVML 225
BLAST of CcUC08G155170.1 vs. NCBI nr
Match:
XP_038885025.1 (methyl-CpG-binding domain-containing protein 8 isoform X1 [Benincasa hispida])
HSP 1 Score: 395.6 bits (1015), Expect = 2.8e-106
Identity = 214/222 (96.40%), Postives = 214/222 (96.40%), Query Frame = 0
Query: 1 MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60
MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI
Sbjct: 1 MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60
Query: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120
PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK
Sbjct: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120
Query: 121 QLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180
QLFVGD HCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR
Sbjct: 121 QLFVGDPHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180
Query: 181 GRPRKDSNRFAQSNGNAASEFKSGCDKSAAA-----EEEIVM 218
GRPRKDSNRFAQSNGNAA EFKSGCDK AAA EEEIVM
Sbjct: 181 GRPRKDSNRFAQSNGNAAPEFKSGCDKPAAAAAEEEEEEIVM 222
BLAST of CcUC08G155170.1 vs. NCBI nr
Match:
XP_004152635.1 (methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis sativus] >KGN62697.1 hypothetical protein Csa_022593 [Cucumis sativus])
HSP 1 Score: 374.0 bits (959), Expect = 8.8e-100
Identity = 204/223 (91.48%), Postives = 209/223 (93.72%), Query Frame = 0
Query: 1 MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60
MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRF SSSSSSSSTSQSNNEDDVLI
Sbjct: 1 MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF-SSSSSSSSTSQSNNEDDVLI 60
Query: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120
PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIV LF
Sbjct: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVHLFN 120
Query: 121 QLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180
QLFVGDSHC VNDSYGDGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS PIKRRR
Sbjct: 121 QLFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRRR 180
Query: 181 GRPRKDSNRFAQSNGNAASEFKSGCDK---SAAAEEEIVMVML 221
GRPRKDSNRF QSNGNAA EFKSGCDK +AAA+EEIVMVML
Sbjct: 181 GRPRKDSNRFVQSNGNAAPEFKSGCDKPAAAAAAKEEIVMVML 222
BLAST of CcUC08G155170.1 vs. NCBI nr
Match:
XP_008444843.1 (PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis melo] >KAA0065145.1 methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 370.9 bits (951), Expect = 7.4e-99
Identity = 204/222 (91.89%), Postives = 209/222 (94.14%), Query Frame = 0
Query: 1 MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60
MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRF SSSSSSSSTSQSNNEDDVLI
Sbjct: 1 MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF-SSSSSSSSTSQSNNEDDVLI 60
Query: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120
PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIV LF
Sbjct: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFN 120
Query: 121 QLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180
QLFVGDSHCAVNDS+GDGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS+APIKRRR
Sbjct: 121 QLFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRR 180
Query: 181 GRPRKDSNRFAQSNGNAASEFKSGCDK--SAAAEEEIVMVML 221
GRPRKDSNRF QSNGNAA EFKSG DK AAAEEEIVMVML
Sbjct: 181 GRPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMVML 221
BLAST of CcUC08G155170.1 vs. NCBI nr
Match:
XP_004152634.1 (methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis sativus])
HSP 1 Score: 369.0 bits (946), Expect = 2.8e-98
Identity = 201/220 (91.36%), Postives = 206/220 (93.64%), Query Frame = 0
Query: 1 MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60
MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRF SSSSSSSSTSQSNNEDDVLI
Sbjct: 1 MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF-SSSSSSSSTSQSNNEDDVLI 60
Query: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120
PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIV LF
Sbjct: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVHLFN 120
Query: 121 QLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180
QLFVGDSHC VNDSYGDGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS PIKRRR
Sbjct: 121 QLFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRRR 180
Query: 181 GRPRKDSNRFAQSNGNAASEFKSGCDK---SAAAEEEIVM 218
GRPRKDSNRF QSNGNAA EFKSGCDK +AAA+EEIVM
Sbjct: 181 GRPRKDSNRFVQSNGNAAPEFKSGCDKPAAAAAAKEEIVM 219
BLAST of CcUC08G155170.1 vs. ExPASy Swiss-Prot
Match:
Q9LME6 (Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 GN=MBD8 PE=2 SV=1)
HSP 1 Score: 91.3 bits (225), Expect = 1.5e-17
Identity = 80/176 (45.45%), Postives = 103/176 (58.52%), Query Frame = 0
Query: 20 LPIIDLRLLSQSELYCLSRFSS-SSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQT 79
LP+ID RLLSQSEL LS+ SS S SSS+S + S DD L PKIDRSVFNESAGSRKQT
Sbjct: 26 LPLIDTRLLSQSELRALSQCSSLSPSSSASLAASAGGDDDLTPKIDRSVFNESAGSRKQT 85
Query: 80 YSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFKQLFVGDSHCAVNDSYGDG 139
+ RLRLA R PQ S + Q D E Q+ +L + LF DS+ + + +G
Sbjct: 86 FLRLRLA-RHPQPPEEPPSP--QRQRDDSSREEQTQVASLLRSLFNVDSNQS-KEEEDEG 145
Query: 140 DEDLVLVNHIYDESVPDSSYAIFQSIPVDIID------SSYAPIKRRRGRPRKDSN 189
+E+L + + +SY ++Q +D I +S IKR+RGRPRK N
Sbjct: 146 EEEL----EDNEGQIHYNSY-VYQRPNLDSIQNVLIQGTSGNKIKRKRGRPRKIRN 192
BLAST of CcUC08G155170.1 vs. ExPASy TrEMBL
Match:
A0A0A0LPH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368980 PE=4 SV=1)
HSP 1 Score: 374.0 bits (959), Expect = 4.3e-100
Identity = 204/223 (91.48%), Postives = 209/223 (93.72%), Query Frame = 0
Query: 1 MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60
MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRF SSSSSSSSTSQSNNEDDVLI
Sbjct: 1 MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF-SSSSSSSSTSQSNNEDDVLI 60
Query: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120
PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIV LF
Sbjct: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVHLFN 120
Query: 121 QLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180
QLFVGDSHC VNDSYGDGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS PIKRRR
Sbjct: 121 QLFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRRR 180
Query: 181 GRPRKDSNRFAQSNGNAASEFKSGCDK---SAAAEEEIVMVML 221
GRPRKDSNRF QSNGNAA EFKSGCDK +AAA+EEIVMVML
Sbjct: 181 GRPRKDSNRFVQSNGNAAPEFKSGCDKPAAAAAAKEEIVMVML 222
BLAST of CcUC08G155170.1 vs. ExPASy TrEMBL
Match:
A0A5A7VH26 (Methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004810 PE=4 SV=1)
HSP 1 Score: 370.9 bits (951), Expect = 3.6e-99
Identity = 204/222 (91.89%), Postives = 209/222 (94.14%), Query Frame = 0
Query: 1 MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60
MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRF SSSSSSSSTSQSNNEDDVLI
Sbjct: 1 MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF-SSSSSSSSTSQSNNEDDVLI 60
Query: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120
PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIV LF
Sbjct: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFN 120
Query: 121 QLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180
QLFVGDSHCAVNDS+GDGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS+APIKRRR
Sbjct: 121 QLFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRR 180
Query: 181 GRPRKDSNRFAQSNGNAASEFKSGCDK--SAAAEEEIVMVML 221
GRPRKDSNRF QSNGNAA EFKSG DK AAAEEEIVMVML
Sbjct: 181 GRPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMVML 221
BLAST of CcUC08G155170.1 vs. ExPASy TrEMBL
Match:
A0A1S3BAU3 (methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488067 PE=4 SV=1)
HSP 1 Score: 370.9 bits (951), Expect = 3.6e-99
Identity = 204/222 (91.89%), Postives = 209/222 (94.14%), Query Frame = 0
Query: 1 MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60
MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRF SSSSSSSSTSQSNNEDDVLI
Sbjct: 1 MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF-SSSSSSSSTSQSNNEDDVLI 60
Query: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120
PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIV LF
Sbjct: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFN 120
Query: 121 QLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180
QLFVGDSHCAVNDS+GDGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS+APIKRRR
Sbjct: 121 QLFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRR 180
Query: 181 GRPRKDSNRFAQSNGNAASEFKSGCDK--SAAAEEEIVMVML 221
GRPRKDSNRF QSNGNAA EFKSG DK AAAEEEIVMVML
Sbjct: 181 GRPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMVML 221
BLAST of CcUC08G155170.1 vs. ExPASy TrEMBL
Match:
A0A1S3BC64 (methyl-CpG-binding domain-containing protein 8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488067 PE=4 SV=1)
HSP 1 Score: 365.9 bits (938), Expect = 1.2e-97
Identity = 201/219 (91.78%), Postives = 206/219 (94.06%), Query Frame = 0
Query: 1 MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60
MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRF SSSSSSSSTSQSNNEDDVLI
Sbjct: 1 MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF-SSSSSSSSTSQSNNEDDVLI 60
Query: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120
PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIV LF
Sbjct: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFN 120
Query: 121 QLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180
QLFVGDSHCAVNDS+GDGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS+APIKRRR
Sbjct: 121 QLFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRR 180
Query: 181 GRPRKDSNRFAQSNGNAASEFKSGCDK--SAAAEEEIVM 218
GRPRKDSNRF QSNGNAA EFKSG DK AAAEEEIVM
Sbjct: 181 GRPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVM 218
BLAST of CcUC08G155170.1 vs. ExPASy TrEMBL
Match:
A0A6J1BS27 (methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005043 PE=4 SV=1)
HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94
Identity = 193/220 (87.73%), Postives = 203/220 (92.27%), Query Frame = 0
Query: 1 MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60
MASTTMVASPSN+SFRMN LPIIDLRLLSQSELYCLSRF SSSSSSTSQSN++DDVLI
Sbjct: 1 MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRF---SSSSSSTSQSNDDDDVLI 60
Query: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120
PKIDRSVFNESAGSRKQTYSRLRLAPRKPQF SSSSSS IRPQSP+RLD ESA+I+TLFK
Sbjct: 61 PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQSPERLDAESAKIITLFK 120
Query: 121 QLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180
QLFVGDSHC V++SYGD DEDLVL+NHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR
Sbjct: 121 QLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180
Query: 181 GRPRKDSNRFAQSNGNAASEFKSGCDKSAAAEEEIVMVML 221
GRPRKDSNRF QSNGNA KSGC+K A EEEIVMVML
Sbjct: 181 GRPRKDSNRFPQSNGNAVPNSKSGCEK-RAEEEEIVMVML 216
BLAST of CcUC08G155170.1 vs. TAIR 10
Match:
AT1G22310.2 (methyl-CPG-binding domain 8 )
HSP 1 Score: 91.3 bits (225), Expect = 1.1e-18
Identity = 80/176 (45.45%), Postives = 103/176 (58.52%), Query Frame = 0
Query: 20 LPIIDLRLLSQSELYCLSRFSS-SSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQT 79
LP+ID RLLSQSEL LS+ SS S SSS+S + S DD L PKIDRSVFNESAGSRKQT
Sbjct: 26 LPLIDTRLLSQSELRALSQCSSLSPSSSASLAASAGGDDDLTPKIDRSVFNESAGSRKQT 85
Query: 80 YSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFKQLFVGDSHCAVNDSYGDG 139
+ RLRLA R PQ S + Q D E Q+ +L + LF DS+ + + +G
Sbjct: 86 FLRLRLA-RHPQPPEEPPSP--QRQRDDSSREEQTQVASLLRSLFNVDSNQS-KEEEDEG 145
Query: 140 DEDLVLVNHIYDESVPDSSYAIFQSIPVDIID------SSYAPIKRRRGRPRKDSN 189
+E+L + + +SY ++Q +D I +S IKR+RGRPRK N
Sbjct: 146 EEEL----EDNEGQIHYNSY-VYQRPNLDSIQNVLIQGTSGNKIKRKRGRPRKIRN 192
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038885026.1 | 8.8e-108 | 96.44 | methyl-CpG-binding domain-containing protein 8 isoform X2 [Benincasa hispida] | [more] |
XP_038885025.1 | 2.8e-106 | 96.40 | methyl-CpG-binding domain-containing protein 8 isoform X1 [Benincasa hispida] | [more] |
XP_004152635.1 | 8.8e-100 | 91.48 | methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis sativus] >KGN... | [more] |
XP_008444843.1 | 7.4e-99 | 91.89 | PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis me... | [more] |
XP_004152634.1 | 2.8e-98 | 91.36 | methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Q9LME6 | 1.5e-17 | 45.45 | Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 G... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LPH8 | 4.3e-100 | 91.48 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368980 PE=4 SV=1 | [more] |
A0A5A7VH26 | 3.6e-99 | 91.89 | Methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo var. m... | [more] |
A0A1S3BAU3 | 3.6e-99 | 91.89 | methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo OX=365... | [more] |
A0A1S3BC64 | 1.2e-97 | 91.78 | methyl-CpG-binding domain-containing protein 8 isoform X1 OS=Cucumis melo OX=365... | [more] |
A0A6J1BS27 | 1.2e-94 | 87.73 | methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Momordica charantia... | [more] |
Match Name | E-value | Identity | Description | |
AT1G22310.2 | 1.1e-18 | 45.45 | methyl-CPG-binding domain 8 | [more] |