Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAATCTTCTTTTTGTAATTTTATATATTTTCCCGAGAAAGTGACTGAGAAAATCGAACCGCCATGATAATGACTCTCCTTCTTCTACAACAACAATCTCCATTTTCATTCCTTCAATTTCCATTTCGATTTCGAATCTCCCGATTTTAGGGTTTCCAACGCCATGGATTCCGGTTCTGCAGCCACCAGGTCGCGGTCTGCTTTGAATCACGACATCTTCCGGAGTTGGAACGGGAAGCAGATTCATCTCAGGGATGACGACGCCGCGGCGGTGGAGTATGGATTTCGATCCACCCCTCAGTTGAGCCCTAGATCTTTCCGATCGAGTTACCGGAGCCTCTCGCCGCCGGCCAAGGCTCTCGCCGTGGCTACCGGGCAGAAGGAGCTCATGGAAATCGTGAACAATATGCCGGAGTGTTCTTACGAGTTGTCGTTGAGAGATCTGGTGGAGCAGCCCATGGTTTTGGGCGCCCGTGAGCAAACCCTAACTGATGATGTTAGGGTTTTCGATTTGGGCGGCGGCGATCGGGAGAATCGGAGATCGAGGAAGGAAAGTAGGCCGCCGTCGGCGTTCGTGGAGAATGGAGGTTTGTATCTGAAGATGGGGTTACCGAAATCGATTGGAGCGAAGACGACGAGGAAGAAGATGATTGATTCTGGTTTGAATATGAGTGCTAAAGTTTCGCCGAAACCTTCTCAGTCGAGTGAAAATGGTATAAACGATGGAAATATGAAGAGCAAGAACAGAACAAAAGCCACCCATAGGTAACGCCCTCAATCTTTATTGGATTCATTTCTTACCTTTTATCTTAAGAAATTAATATTTGATCATGCTCACCTAAGAATTAATGTCCTACTAGTTTGACATTCAAATGTTGTAGTGTCAAGGTCGAGCAGCATATAAGTTGGTCCGGACAAGTCGCGGATACCAAAATAATAATAATAATATTTGATATCCTGTGATGAAATGAACAACATGGCAGTTCACCATTCAGTAAAATATTTTGTGATCTACATCAATTTGGGAAGTAAAATTTCTGTAGGTGGTAATACTAGTAGCATAGGAACCTGCTCTGAAATGAATCTGTTCAGAACACGTGGATTGTATCATGTAAGAAATTGCTATTCTGAAGATAAATCATTTTTCTCTGAAATGAAAAACAGAGAAATTCACCATTCAATGGTATCAATCATTTATATTCTGAAATCATCATTTTGGGTTGTAAATTTCTTAATCTGTTTCATGCACCAGTATTCTAAATTAAAGTTTACAGGGCTGATTATGGGCGTTGTTTCTCTTAAATGAAGAGTAGGCCAATTCATTATTAATAGAGAATCATTTTGGATTGATAAAGTTCCATTTGATAACTATTTGAGTTTTTGTTTTTTGTTTATAAAAGTTAAGTCTATTTATACTCAAATTTCCTACCAATATATCAATCTTTTCTTAAGAGAGTAGGTGAATGCTGATACTATCCAAATTTCAAAAACAAAAACAAACTTTGGGATACTACTTTTTTTTTGCTTCCAAATTTTGGTTTTGTTTCTTAAAATATAGGCATCTAAATAAGAAAAAAAAATTTGGTAAGGTAGTTCTAGACTTAAATTTAAAAAACAAAATGGTTATCAAACGAGGTTTAAACTGGACTCATCATCATTAATTTATTCTCATGAATCATGATTGCATTGTAGGCATGAGAGTGGAGGTTGCTGGTCATGTATTTATCCCAAATACAACGAACGAGATGATTAAAGAGGCTGCTATGCAATCCAATCAGACAAAGCAAAGCACAAAGCAGAAGCCATAGGCATATCTATATGAAAATGGAGGCATTTATCCTACACCATCTGTATATTCATTCCTTTCTAGTTTTTCAACTAAAATGCTTCCTTTTTTGTTTGTCTTTTTTTTTTGTTCTTTGATATATATACATATAAACATATATATATATATCCTTGTGTCTTCTTCTTGAAAAGCTAATCCATGGAATGAATCTCTTATTTCAATGAAAA
mRNA sequence
CAAAATCTTCTTTTTGTAATTTTATATATTTTCCCGAGAAAGTGACTGAGAAAATCGAACCGCCATGATAATGACTCTCCTTCTTCTACAACAACAATCTCCATTTTCATTCCTTCAATTTCCATTTCGATTTCGAATCTCCCGATTTTAGGGTTTCCAACGCCATGGATTCCGGTTCTGCAGCCACCAGGTCGCGGTCTGCTTTGAATCACGACATCTTCCGGAGTTGGAACGGGAAGCAGATTCATCTCAGGGATGACGACGCCGCGGCGGTGGAGTATGGATTTCGATCCACCCCTCAGTTGAGCCCTAGATCTTTCCGATCGAGTTACCGGAGCCTCTCGCCGCCGGCCAAGGCTCTCGCCGTGGCTACCGGGCAGAAGGAGCTCATGGAAATCGTGAACAATATGCCGGAGTGTTCTTACGAGTTGTCGTTGAGAGATCTGGTGGAGCAGCCCATGGTTTTGGGCGCCCGTGAGCAAACCCTAACTGATGATGTTAGGGTTTTCGATTTGGGCGGCGGCGATCGGGAGAATCGGAGATCGAGGAAGGAAAGTAGGCCGCCGTCGGCGTTCGTGGAGAATGGAGGTTTGTATCTGAAGATGGGGTTACCGAAATCGATTGGAGCGAAGACGACGAGGAAGAAGATGATTGATTCTGGTTTGAATATGAGTGCTAAAGTTTCGCCGAAACCTTCTCAGTCGAGTGAAAATGGTATAAACGATGGAAATATGAAGAGCAAGAACAGAACAAAAGCCACCCATAGGCATGAGAGTGGAGGTTGCTGGTCATGTATTTATCCCAAATACAACGAACGAGATGATTAAAGAGGCTGCTATGCAATCCAATCAGACAAAGCAAAGCACAAAGCAGAAGCCATAGGCATATCTATATGAAAATGGAGGCATTTATCCTACACCATCTGTATATTCATTCCTTTCTAGTTTTTCAACTAAAATGCTTCCTTTTTTGTTTGTCTTTTTTTTTTGTTCTTTGATATATATACATATAAACATATATATATATATCCTTGTGTCTTCTTCTTGAAAAGCTAATCCATGGAATGAATCTCTTATTTCAATGAAAA
Coding sequence (CDS)
ATGGATTCCGGTTCTGCAGCCACCAGGTCGCGGTCTGCTTTGAATCACGACATCTTCCGGAGTTGGAACGGGAAGCAGATTCATCTCAGGGATGACGACGCCGCGGCGGTGGAGTATGGATTTCGATCCACCCCTCAGTTGAGCCCTAGATCTTTCCGATCGAGTTACCGGAGCCTCTCGCCGCCGGCCAAGGCTCTCGCCGTGGCTACCGGGCAGAAGGAGCTCATGGAAATCGTGAACAATATGCCGGAGTGTTCTTACGAGTTGTCGTTGAGAGATCTGGTGGAGCAGCCCATGGTTTTGGGCGCCCGTGAGCAAACCCTAACTGATGATGTTAGGGTTTTCGATTTGGGCGGCGGCGATCGGGAGAATCGGAGATCGAGGAAGGAAAGTAGGCCGCCGTCGGCGTTCGTGGAGAATGGAGGTTTGTATCTGAAGATGGGGTTACCGAAATCGATTGGAGCGAAGACGACGAGGAAGAAGATGATTGATTCTGGTTTGAATATGAGTGCTAAAGTTTCGCCGAAACCTTCTCAGTCGAGTGAAAATGGTATAAACGATGGAAATATGAAGAGCAAGAACAGAACAAAAGCCACCCATAGGCATGAGAGTGGAGGTTGCTGGTCATGTATTTATCCCAAATACAACGAACGAGATGATTAA
Protein sequence
MDSGSAATRSRSALNHDIFRSWNGKQIHLRDDDAAAVEYGFRSTPQLSPRSFRSSYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRVFDLGGGDRENRRSRKESRPPSAFVENGGLYLKMGLPKSIGAKTTRKKMIDSGLNMSAKVSPKPSQSSENGINDGNMKSKNRTKATHRHESGGCWSCIYPKYNERDD
Homology
BLAST of Sed0025902 vs. NCBI nr
Match:
XP_023536601.1 (uncharacterized protein LOC111797724 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 252.7 bits (644), Expect = 3.0e-63
Identity = 158/271 (58.30%), Postives = 185/271 (68.27%), Query Frame = 0
Query: 1 MDSGS-AATRSRS----ALNHDIFRSWNGKQIHLRDDDAAAVEYGFR-STPQLSPRSFRS 60
MD GS A+TRSRS ALNHDIFRSWNGKQIHL+DD+ VEYGFR S+PQ SP+ +RS
Sbjct: 24 MDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDDE--TVEYGFRLSSPQRSPQFYRS 83
Query: 61 SYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRV 120
+Y+SLSPP+KALA+ATGQKELME+VNNMPE YELSLRDLVEQPMVLG +E T ++
Sbjct: 84 NYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLRDLVEQPMVLGQQEPTGANERD- 143
Query: 121 FDLGGGDR-----ENRRSRKESRP----PSAFVENGGLYLKMGLPKSIGAKTTRKKM--- 180
GGDR ENR+SRKE+ S +ENGGLYLKMG P SIG +T +KK
Sbjct: 144 ---KGGDREVFAMENRKSRKETSALVGRSSWNMENGGLYLKMGFPNSIGTRTKKKKKNNN 203
Query: 181 IDSGLNMSAKVSPKPSQ-------------SSENG-------INDGNMKS---------- 221
DSGLN SAKVSPKPS SSE G +N+G++KS
Sbjct: 204 NDSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYDSSVNNGSIKSSSSSSSNGSN 263
BLAST of Sed0025902 vs. NCBI nr
Match:
XP_022975014.1 (uncharacterized protein LOC111473911 [Cucurbita maxima])
HSP 1 Score: 246.9 bits (629), Expect = 1.6e-61
Identity = 155/270 (57.41%), Postives = 184/270 (68.15%), Query Frame = 0
Query: 1 MDSGS-AATRSRS----ALNHDIFRSWNGKQIHLRDDDAAAVEYGFR-STPQLSPRSFRS 60
MD GS A+TRSRS ALNHDIFRSWNGKQIHL+DD+ VEYGFR S+PQ SP+ +RS
Sbjct: 24 MDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDDE--TVEYGFRLSSPQRSPQFYRS 83
Query: 61 SYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRV 120
+Y+SLSPP+K+LA+ATGQKELME+VNNMPE YELSLRDLVEQPMVLG +E T ++
Sbjct: 84 NYQSLSPPSKSLAIATGQKELMELVNNMPESCYELSLRDLVEQPMVLGQQEPTGANERD- 143
Query: 121 FDLGGGDR-----ENRRSRKESR----PPSAFVENGGLYLKMGLPKSIGAKTTRKKM--I 180
GGDR ENR+S+KE+ S +ENGGLYLKMG P SIG +T +KK
Sbjct: 144 ---KGGDREVFATENRKSKKETSGLVGRSSWNMENGGLYLKMGFPNSIGTRTKKKKKKNN 203
Query: 181 DSGLNMSAKVSPKPSQ-------------SSENG-------INDGNMKS----------- 221
DSGLN SAKVSPKPS SSE G +N+G++KS
Sbjct: 204 DSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYDSIVNNGSIKSSSSSSSNGSNG 263
BLAST of Sed0025902 vs. NCBI nr
Match:
KAG6592161.1 (hypothetical protein SDJN03_14507, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 245.7 bits (626), Expect = 3.6e-61
Identity = 156/270 (57.78%), Postives = 183/270 (67.78%), Query Frame = 0
Query: 1 MDSGS-AATRSRS----ALNHDIFRSWNGKQIHLRDDDAAAVEYGFR-STPQLSPRSFRS 60
MD GS A+TRSRS ALNHDIFRSWNGKQIHL+DD+ AVEYGFR S+PQ SP+ +RS
Sbjct: 24 MDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDDE--AVEYGFRLSSPQRSPQFYRS 83
Query: 61 SYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRV 120
+Y+SLSPP+KALA+ATGQKELME+VNNMPE YELSLRDLVEQPMVLG +E T ++
Sbjct: 84 NYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLRDLVEQPMVLGQQEPTGANERD- 143
Query: 121 FDLGGGDR-----ENRRSRKESRP----PSAFVENGGLYLKMGLPKSIGAKTTRKKM--I 180
GGDR ENR+S+KE+ S +ENGGLYLKMG P SIG +T +KK
Sbjct: 144 ---KGGDREVFAMENRKSKKETSALVGRSSWNMENGGLYLKMGFPNSIGTRTKKKKKKNN 203
Query: 181 DSGLNMSAKVSPKPSQ-------------SSENG-------INDGNMKS----------- 221
DSGLN SAKVSPKPS SSE G +N+G++KS
Sbjct: 204 DSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYDSSVNNGSIKSSSSSSSNGSNG 263
BLAST of Sed0025902 vs. NCBI nr
Match:
XP_022937271.1 (uncharacterized protein LOC111443607 [Cucurbita moschata])
HSP 1 Score: 245.4 bits (625), Expect = 4.7e-61
Identity = 156/271 (57.56%), Postives = 183/271 (67.53%), Query Frame = 0
Query: 1 MDSGS-AATRSRS----ALNHDIFRSWNGKQIHLRDDDAAAVEYGFR-STPQLSPRSFRS 60
MD GS A+TRSRS ALNHDIFRSWNGKQIHL+DD+ AVEYGFR S+PQ SP+ +RS
Sbjct: 24 MDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDDE--AVEYGFRLSSPQRSPQFYRS 83
Query: 61 SYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRV 120
+Y+SLSPP+KALA+ATGQKELME+VNNMPE YELSLRDLVEQPMVLG +E T ++
Sbjct: 84 NYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLRDLVEQPMVLGQQEPTGANERD- 143
Query: 121 FDLGGGDR-----ENRRSRKESRP----PSAFVENGGLYLKMGLPKSIGAKTTRKKM--- 180
GGDR ENR+S+KE+ S +ENGGLYLKMG P SIG +T +KK
Sbjct: 144 ---KGGDREVFAMENRKSKKETSALVGRSSWNMENGGLYLKMGFPNSIGTRTKKKKKKKN 203
Query: 181 IDSGLNMSAKVSPKPSQ-------------SSENG-------INDGNMKS---------- 221
DSGLN SAKVSPKPS SSE G +N+G++KS
Sbjct: 204 NDSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYDSSVNNGSIKSSSSSSSNGSN 263
BLAST of Sed0025902 vs. NCBI nr
Match:
XP_004146783.1 (uncharacterized protein LOC101215856 [Cucumis sativus] >KGN47988.2 hypothetical protein Csa_004242 [Cucumis sativus])
HSP 1 Score: 245.4 bits (625), Expect = 4.7e-61
Identity = 151/258 (58.53%), Postives = 173/258 (67.05%), Query Frame = 0
Query: 1 MDSGSAATRSRSALNHDIFRSWNGKQIHLRDDDAAAVEYGFRST-PQLSPRSFRSSYRSL 60
M+ S SR ALNHDIFRSWNGKQIHLRDD EYGFR T PQ SP+ +RS+Y +L
Sbjct: 25 MEFSSPTRSSRPALNHDIFRSWNGKQIHLRDDH--PFEYGFRLTSPQRSPQFYRSNYHTL 84
Query: 61 SPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRVFDLGG 120
SPP+KALA+ATGQKELMEIVNNMPE YELSLRDLVEQPMVLG RE T D+ + LGG
Sbjct: 85 SPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQPMVLGQREDTGVDEKDSY-LGG 144
Query: 121 G----DRENRRSRKESRP--PSAFVENGGLYLKMGLPKSIGAKT-TRKKMIDSGLNMSAK 180
RENR+SRKE+R +EN GLYLKMG PKSIG T +KK DS LNMSAK
Sbjct: 145 DREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFPKSIGTTTRKKKKKNDSSLNMSAK 204
Query: 181 VSPKPSQ-------------SSE-------NGINDGNMKS----------KNRTKATHRH 221
VSPKP Q SSE + +N+G++KS KNRTK+T R
Sbjct: 205 VSPKPPQLVEKDWWKRRLSVSSESESLSYGSNVNNGSIKSSSSSSSDGSNKNRTKSTGRR 264
BLAST of Sed0025902 vs. ExPASy TrEMBL
Match:
A0A6J1IJ72 (uncharacterized protein LOC111473911 OS=Cucurbita maxima OX=3661 GN=LOC111473911 PE=4 SV=1)
HSP 1 Score: 246.9 bits (629), Expect = 7.9e-62
Identity = 155/270 (57.41%), Postives = 184/270 (68.15%), Query Frame = 0
Query: 1 MDSGS-AATRSRS----ALNHDIFRSWNGKQIHLRDDDAAAVEYGFR-STPQLSPRSFRS 60
MD GS A+TRSRS ALNHDIFRSWNGKQIHL+DD+ VEYGFR S+PQ SP+ +RS
Sbjct: 24 MDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDDE--TVEYGFRLSSPQRSPQFYRS 83
Query: 61 SYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRV 120
+Y+SLSPP+K+LA+ATGQKELME+VNNMPE YELSLRDLVEQPMVLG +E T ++
Sbjct: 84 NYQSLSPPSKSLAIATGQKELMELVNNMPESCYELSLRDLVEQPMVLGQQEPTGANERD- 143
Query: 121 FDLGGGDR-----ENRRSRKESR----PPSAFVENGGLYLKMGLPKSIGAKTTRKKM--I 180
GGDR ENR+S+KE+ S +ENGGLYLKMG P SIG +T +KK
Sbjct: 144 ---KGGDREVFATENRKSKKETSGLVGRSSWNMENGGLYLKMGFPNSIGTRTKKKKKKNN 203
Query: 181 DSGLNMSAKVSPKPSQ-------------SSENG-------INDGNMKS----------- 221
DSGLN SAKVSPKPS SSE G +N+G++KS
Sbjct: 204 DSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYDSIVNNGSIKSSSSSSSNGSNG 263
BLAST of Sed0025902 vs. ExPASy TrEMBL
Match:
A0A6J1F9W6 (uncharacterized protein LOC111443607 OS=Cucurbita moschata OX=3662 GN=LOC111443607 PE=4 SV=1)
HSP 1 Score: 245.4 bits (625), Expect = 2.3e-61
Identity = 156/271 (57.56%), Postives = 183/271 (67.53%), Query Frame = 0
Query: 1 MDSGS-AATRSRS----ALNHDIFRSWNGKQIHLRDDDAAAVEYGFR-STPQLSPRSFRS 60
MD GS A+TRSRS ALNHDIFRSWNGKQIHL+DD+ AVEYGFR S+PQ SP+ +RS
Sbjct: 24 MDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDDE--AVEYGFRLSSPQRSPQFYRS 83
Query: 61 SYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRV 120
+Y+SLSPP+KALA+ATGQKELME+VNNMPE YELSLRDLVEQPMVLG +E T ++
Sbjct: 84 NYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLRDLVEQPMVLGQQEPTGANERD- 143
Query: 121 FDLGGGDR-----ENRRSRKESRP----PSAFVENGGLYLKMGLPKSIGAKTTRKKM--- 180
GGDR ENR+S+KE+ S +ENGGLYLKMG P SIG +T +KK
Sbjct: 144 ---KGGDREVFAMENRKSKKETSALVGRSSWNMENGGLYLKMGFPNSIGTRTKKKKKKKN 203
Query: 181 IDSGLNMSAKVSPKPSQ-------------SSENG-------INDGNMKS---------- 221
DSGLN SAKVSPKPS SSE G +N+G++KS
Sbjct: 204 NDSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYDSSVNNGSIKSSSSSSSNGSN 263
BLAST of Sed0025902 vs. ExPASy TrEMBL
Match:
A0A1S4E6L8 (uncharacterized protein LOC103504041 OS=Cucumis melo OX=3656 GN=LOC103504041 PE=4 SV=1)
HSP 1 Score: 241.5 bits (615), Expect = 3.3e-60
Identity = 150/256 (58.59%), Postives = 173/256 (67.58%), Query Frame = 0
Query: 3 SGSAATRSRSALNHDIFRSWNGKQIHLRDDDAAAVEYGFRST-PQLSPRSFRSSYRSLSP 62
S S SR ALNHDIFRSWNGKQIHLRDD EYGFR T PQ SP+ +RS+Y +LSP
Sbjct: 29 SPSPTRSSRPALNHDIFRSWNGKQIHLRDDH--PFEYGFRLTSPQRSPQFYRSNYHTLSP 88
Query: 63 PAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRVFDLGGG- 122
P+KALA+ATGQKELMEIVNNMPE YELSLRDLVEQPMV+G RE T D+ R +LGG
Sbjct: 89 PSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQPMVVGQREDTGVDE-RDSNLGGHR 148
Query: 123 ---DRENRRSRKESRP--PSAFVENGGLYLKMGLPKSIGAKT-TRKKMIDSGLNMSAKVS 182
RENR+SRKE+R + +EN GLYLKMG PKSIG T +KK DS LNMSAKVS
Sbjct: 149 EVFSRENRKSRKETRALVGRSSMENEGLYLKMGFPKSIGTTTRKKKKKNDSSLNMSAKVS 208
Query: 183 PKPSQ-------------SSE-------NGINDGNMKS----------KNRTKATHRHES 221
PKP Q SSE + +N+G++KS K+RTK+T R
Sbjct: 209 PKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNGSIKSSSSSSSNGSNKSRTKSTGRRAK 268
BLAST of Sed0025902 vs. ExPASy TrEMBL
Match:
A0A6J1DJS6 (uncharacterized protein LOC111021132 OS=Momordica charantia OX=3673 GN=LOC111021132 PE=4 SV=1)
HSP 1 Score: 221.9 bits (564), Expect = 2.7e-54
Identity = 138/248 (55.65%), Postives = 167/248 (67.34%), Query Frame = 0
Query: 10 SRSALNHDIFRSWNGKQIHLRDDDAAAVEYGFRSTPQLSPRSFRSSYRSLSPPAKALAVA 69
SR ALNH+IFRSWNG+QIHLR D+A +E GFR +PQ SP+ +RS+Y+SLSPP+KA A+A
Sbjct: 28 SRPALNHEIFRSWNGRQIHLR-DEAVELESGFRLSPQRSPQFYRSNYQSLSPPSKARAIA 87
Query: 70 TGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRVFDLGGGDR-----EN 129
TGQKELME+V++MPE YELSLRDLVEQP VLG E+T+ D+ R F+L GGDR EN
Sbjct: 88 TGQKELMEMVSHMPESCYELSLRDLVEQPRVLGLEEETVADE-RDFNL-GGDREIFAMEN 147
Query: 130 RRSRKE-SRP----PSAFVENGGLYLKMGLPKSIGAKTTRKKMIDSGLNMSAKVSPKP-- 189
R+S+K SRP + +ENGGLYLKMG PKSIG +KK DS LN SAKVSPKP
Sbjct: 148 RKSKKGISRPLVSKSTGNMENGGLYLKMGFPKSIGTTKKKKKKNDSALNTSAKVSPKPPP 207
Query: 190 -----------SQSSE-------NGINDGNMKS-------------KNRTKATHRHESGG 215
S SSE + IN+G++KS KNRTK+ R+ SGG
Sbjct: 208 PADKDWWKRRFSVSSESESVGYGSSINNGSIKSSSSSSSNGSHGSNKNRTKSARRNTSGG 267
BLAST of Sed0025902 vs. ExPASy TrEMBL
Match:
A0A0A0KH64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G397170 PE=4 SV=1)
HSP 1 Score: 214.9 bits (546), Expect = 3.3e-52
Identity = 140/245 (57.14%), Postives = 159/245 (64.90%), Query Frame = 0
Query: 1 MDSGSAATRSRSALNHDIFRSWNGKQIHLRDDDAAAVEYGFRST-PQLSPRSFRSSYRSL 60
M+ S SR ALNHDIFRSWNGKQIHLRDD EYGFR T PQ SP+ +RS+Y +L
Sbjct: 25 MEFSSPTRSSRPALNHDIFRSWNGKQIHLRDDH--PFEYGFRLTSPQRSPQFYRSNYHTL 84
Query: 61 SPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRVFDLGG 120
SPP+KALA+ATGQKELMEIVNNMPE YELSLRDLVEQPMVLG RE T D+ + LGG
Sbjct: 85 SPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQPMVLGQREDTGVDEKDSY-LGG 144
Query: 121 G----DRENRRSRKESRP--PSAFVENGGLYLKMGLPKSIGAKT-TRKKMIDSGLNMSAK 180
RENR+SRKE+R +EN GLYLKMG PKSIG T +KK DS LNMSAK
Sbjct: 145 DREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFPKSIGTTTRKKKKKNDSSLNMSAK 204
Query: 181 VSPKPSQ-------------SSE-------NGINDGNMKS----------KNRTKATHRH 208
VSPKP Q SSE + +N+G++KS KNRTK+T R
Sbjct: 205 VSPKPPQLVEKDWWKRRLSVSSESESLSYGSNVNNGSIKSSSSSSSDGSNKNRTKSTGRE 264
BLAST of Sed0025902 vs. TAIR 10
Match:
AT1G21390.1 (embryo defective 2170 )
HSP 1 Score: 73.9 bits (180), Expect = 1.8e-13
Identity = 65/186 (34.95%), Postives = 95/186 (51.08%), Query Frame = 0
Query: 41 FRSTPQLSPRSFR--SSYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQP 100
+R++P SP F Y SLSP +KA A+A GQ+ELME+V+ MPE YELSL+DLVE
Sbjct: 35 WRTSPPKSPPPFHRPEDYWSLSPDSKAQAIARGQRELMEMVSKMPESCYELSLKDLVE-V 94
Query: 101 MVLGAREQTLTDDV--RVFDLGGGDRENRRSRKESRPPSAFVENGGLYLKMGLPKSIGA- 160
V E+ + D++ R R+ + ++ S N G LK+ S+GA
Sbjct: 95 KVNQENERKVFDELPKRANRQSKVVRKTKSDKRVDPNRSGGGNNSGFLLKIMFLVSLGAM 154
Query: 161 KTTRKKMIDSGLNMSAKVSPKPSQSSEN-GINDGNMKSKNRTKATHRHESGGCWSCIYPK 220
K T KK + + KVSP+PS S E + D ++ +T R S + I +
Sbjct: 155 KDTTKKKKKKKKDEACKVSPRPSISEETVKVEDKEWWNRMSESSTKRSGSSSSNNSIRSR 214
BLAST of Sed0025902 vs. TAIR 10
Match:
AT1G76980.1 (BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 65 Blast hits to 65 proteins in 23 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 8; Plants - 40; Viruses - 3; Other Eukaryotes - 5 (source: NCBI BLink). )
HSP 1 Score: 71.6 bits (174), Expect = 8.7e-13
Identity = 54/164 (32.93%), Postives = 91/164 (55.49%), Query Frame = 0
Query: 41 FRSTPQLSPRSFRSSYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMV 100
+R++P SP ++Y++LSP KA +A GQ+ELM++V+ MPE YELSL+DLVE
Sbjct: 35 WRTSPPKSPAHLHNNYQNLSPVTKAQVIARGQRELMDMVSKMPESCYELSLKDLVE---- 94
Query: 101 LGAREQTLTDDVRVFD-LGGGDRENRRSRKESRPP-------SAFVENGGLYLKMGLPKS 160
T++ +VFD + +++ R+ ++++ + V N G LK+ P S
Sbjct: 95 ------VNTEEEKVFDEMPQREKKPRKVVRKTKSDKWVDPIRNGGVNNSGFLLKLVFPVS 154
Query: 161 IGAKTTRKKMIDSGLNMSAKVSPKPSQSSEN-GINDGNMKSKNR 196
+GAK K D+ + S+ S + SS I+D +MK +++
Sbjct: 155 LGAKKKTNKKKDNDDDDSSVTSKRSWISSPRPSISDLSMKREDK 188
BLAST of Sed0025902 vs. TAIR 10
Match:
AT1G76980.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 61 Blast hits to 61 proteins in 18 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 2; Plants - 40; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 71.6 bits (174), Expect = 8.7e-13
Identity = 54/164 (32.93%), Postives = 91/164 (55.49%), Query Frame = 0
Query: 41 FRSTPQLSPRSFRSSYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMV 100
+R++P SP ++Y++LSP KA +A GQ+ELM++V+ MPE YELSL+DLVE
Sbjct: 35 WRTSPPKSPAHLHNNYQNLSPVTKAQVIARGQRELMDMVSKMPESCYELSLKDLVE---- 94
Query: 101 LGAREQTLTDDVRVFD-LGGGDRENRRSRKESRPP-------SAFVENGGLYLKMGLPKS 160
T++ +VFD + +++ R+ ++++ + V N G LK+ P S
Sbjct: 95 ------VNTEEEKVFDEMPQREKKPRKVVRKTKSDKWVDPIRNGGVNNSGFLLKLVFPVS 154
Query: 161 IGAKTTRKKMIDSGLNMSAKVSPKPSQSSEN-GINDGNMKSKNR 196
+GAK K D+ + S+ S + SS I+D +MK +++
Sbjct: 155 LGAKKKTNKKKDNDDDDSSVTSKRSWISSPRPSISDLSMKREDK 188
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023536601.1 | 3.0e-63 | 58.30 | uncharacterized protein LOC111797724 [Cucurbita pepo subsp. pepo] | [more] |
XP_022975014.1 | 1.6e-61 | 57.41 | uncharacterized protein LOC111473911 [Cucurbita maxima] | [more] |
KAG6592161.1 | 3.6e-61 | 57.78 | hypothetical protein SDJN03_14507, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022937271.1 | 4.7e-61 | 57.56 | uncharacterized protein LOC111443607 [Cucurbita moschata] | [more] |
XP_004146783.1 | 4.7e-61 | 58.53 | uncharacterized protein LOC101215856 [Cucumis sativus] >KGN47988.2 hypothetical ... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1IJ72 | 7.9e-62 | 57.41 | uncharacterized protein LOC111473911 OS=Cucurbita maxima OX=3661 GN=LOC111473911... | [more] |
A0A6J1F9W6 | 2.3e-61 | 57.56 | uncharacterized protein LOC111443607 OS=Cucurbita moschata OX=3662 GN=LOC1114436... | [more] |
A0A1S4E6L8 | 3.3e-60 | 58.59 | uncharacterized protein LOC103504041 OS=Cucumis melo OX=3656 GN=LOC103504041 PE=... | [more] |
A0A6J1DJS6 | 2.7e-54 | 55.65 | uncharacterized protein LOC111021132 OS=Momordica charantia OX=3673 GN=LOC111021... | [more] |
A0A0A0KH64 | 3.3e-52 | 57.14 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G397170 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G21390.1 | 1.8e-13 | 34.95 | embryo defective 2170 | [more] |
AT1G76980.1 | 8.7e-13 | 32.93 | BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G2139... | [more] |
AT1G76980.2 | 8.7e-13 | 32.93 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... | [more] |