Clc11G20620 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAGCGCTAGGTTCCTTATTCCCTTATATATATATATATTTTTTAAAAAAATATATATTTTATTCAGTCTTTTCCGTATGCAAATTAGTCAAGGGTGCCTTCCTTGGTGGCATGCAGCCATATGTGTGTGTGTGTGTGGGGCAACATCATCTCGATGGTATGTGTTCGAATAGTGTCCACCCCAAAGGAGCATAAATACTCCCAAAGTCTGGTTGGAGTTTTATAGTGATCCAATATTGAGAAGTAACATTGATTCCAAATTAAGAGAGATGAATAAGGAAACGACGAGCAGCAAAGGTAATAATTTGAGGAAGTCCAGAACCTTTATGGTGCAGAAGAACCAAAGCTGGTGGATGCAACAGGTAGAAGCGGGAGGAGATAATAATAAAGAGAAAAAGGAGGCGAGGGTGGTGGAATTCCCAGTGTCCCCTCAGCTGATGTATGGGGAAGAGATGGTCCATTTTAGCCATCCTCGACACCGGCTGTCCCGGATGTGCCTTCCGGACCTGTTTACGTGCAGTGGGTGCAAGGAGTACGGTGCAGGCAACCGATTCAGTTGCCAACAATGTGATTTCCAGCTCCACGACTTCTGCGCCTTCTCTCCTCCGGCCCTCAAGGCCCACCCCTTCCATTCCCACCATCACCTTCTCTTTTACTCCAAGCCAGGTATGCATGTATGTGTATATATTATTTACTTAAGGGATGTTATTATTCAATTATTAATTAAACTTTATATTCCATTTTAAATTAGTGAAAGGCGGCATCATGCAGTCCAAGTGCGAGATTTGCGCGAAGCCCATAAAAGGATTTGCGTTCCGATGCGGGGTATGCAGCTTCCAGATGCACCCCTGCTGCGCGATGCTATCCTCGGAAATGAAGGTGCCGTCGATGCACCCACACGAGCTCAGGATGCTGGGAGCTGCAACATCATCATCAGTAGTTGATCAGCCCAGTAACTTGGTGGTGTGCGGTGAGTGTAAGAGGAGGAGGTCCGGGAGGGTGTACCGTTGCACTGTGTGCGAGTATCACGTGCATGCAGTGTGCGCAAAGAGCCTGAAAAACGGCCTCCGTGACAACGGCCACAAGGGAACCGAGAAACCCAGCGTGCTGGGGACCGCCGCAAGACTCGCTTCCCAGGTGGTCGTCGAGTTCTTGGGAGGCATCATCGAGGGCCTCGGAGAAGGGGTTGGCGAAGCCTTCGTCCAGAACATCAACGGCAAGGCCGCCCCCTCACCCCTTCATCATCGTTAATTATCTCTGCCTCCTTCTCAACTCCCTCCAAATATATATATATATATATAACCACATATATACTTCCCTTCTACCACACCACCTCCATCCTACTCTTCCTCTTTCTCTTTCTTCCCTATTTTTACTATTTTTTATTATTTTCCTTTTTCTATTTTCTCTCCAATTTCCTCTTATTCCTATATATATTATTTGAAAAATACTTATTATCTATTGATTTCCACCTATTTAATTTAATGGATTTAATGGCAATTCTTTTTTGTTGGCTAAAAATATGGGTGCACTACAATTAACCTACAAGATTCCTCCCATTATTTTCTTTGCAATCTCTCCTCATTTCTCGTTGTTTCCATTTTCATATGTATGCCTTGACTATTCGAAGCCTAGTGTGTGTTTTGTAATCCATATGTAAATTATTTTCATCTTTGCATTTCGTTCGATTCCTCTTTTTCAAGCTCCACTCTCTTTCACTTTCACTTTTTCTATTTATTTGTTTATTGATTGATCTTGCACTATTAAAAGAAAGAAAAATATTTAGGTGCATCCTAGATACCACCTATCTTTATGCATCCATTAAAATTGTA AAAAAAGCGCTAGGTTCCTTATTCCCTTATATATATATATATTTTTTAAAAAAATATATATTTTATTCAGTCTTTTCCGTATGCAAATTAGTCAAGGGTGCCTTCCTTGGTGGCATGCAGCCATATGTGTGTGTGTGTGTGGGGCAACATCATCTCGATGGTATGTGTTCGAATAGTGTCCACCCCAAAGGAGCATAAATACTCCCAAAGTCTGGTTGGAGTTTTATAGTGATCCAATATTGAGAAGTAACATTGATTCCAAATTAAGAGAGATGAATAAGGAAACGACGAGCAGCAAAGGTAATAATTTGAGGAAGTCCAGAACCTTTATGGTGCAGAAGAACCAAAGCTGGTGGATGCAACAGGTAGAAGCGGGAGGAGATAATAATAAAGAGAAAAAGGAGGCGAGGGTGGTGGAATTCCCAGTGTCCCCTCAGCTGATGTATGGGGAAGAGATGGTCCATTTTAGCCATCCTCGACACCGGCTGTCCCGGATGTGCCTTCCGGACCTGTTTACGTGCAGTGGGTGCAAGGAGTACGGTGCAGGCAACCGATTCAGTTGCCAACAATGTGATTTCCAGCTCCACGACTTCTGCGCCTTCTCTCCTCCGGCCCTCAAGGCCCACCCCTTCCATTCCCACCATCACCTTCTCTTTTACTCCAAGCCAGTGAAAGGCGGCATCATGCAGTCCAAGTGCGAGATTTGCGCGAAGCCCATAAAAGGATTTGCGTTCCGATGCGGGGTATGCAGCTTCCAGATGCACCCCTGCTGCGCGATGCTATCCTCGGAAATGAAGGTGCCGTCGATGCACCCACACGAGCTCAGGATGCTGGGAGCTGCAACATCATCATCAGTAGTTGATCAGCCCAGTAACTTGGTGGTGTGCGGTGAGTGTAAGAGGAGGAGGTCCGGGAGGGTGTACCGTTGCACTGTGTGCGAGTATCACGTGCATGCAGTGTGCGCAAAGAGCCTGAAAAACGGCCTCCGTGACAACGGCCACAAGGGAACCGAGAAACCCAGCGTGCTGGGGACCGCCGCAAGACTCGCTTCCCAGGTGGTCGTCGAGTTCTTGGGAGGCATCATCGAGGGCCTCGGAGAAGGGGTTGGCGAAGCCTTCGTCCAGAACATCAACGGCAAGGCCGCCCCCTCACCCCTTCATCATCGTTAATTATCTCTGCCTCCTTCTCAACTCCCTCCAAATATATATATATATATATAACCACATATATACTTCCCTTCTACCACACCACCTCCATCCTACTCTTCCTCTTTCTCTTTCTTCCCTATTTTTACTATTTTTTATTATTTTCCTTTTTCTATTTTCTCTCCAATTTCCTCTTATTCCTATATATATTATTTGAAAAATACTTATTATCTATTGATTTCCACCTATTTAATTTAATGGATTTAATGGCAATTCTTTTTTGTTGGCTAAAAATATGGGTGCACTACAATTAACCTACAAGATTCCTCCCATTATTTTCTTTGCAATCTCTCCTCATTTCTCGTTGTTTCCATTTTCATATGTATGCCTTGACTATTCGAAGCCTAGTGTGTGTTTTGTAATCCATATGTAAATTATTTTCATCTTTGCATTTCGTTCGATTCCTCTTTTTCAAGCTCCACTCTCTTTCACTTTCACTTTTTCTATTTATTTGTTTATTGATTGATCTTGCACTATTAAAAGAAAGAAAAATATTTAGGTGCATCCTAGATACCACCTATCTTTATGCATCCATTAAAATTGTA ATGAATAAGGAAACGACGAGCAGCAAAGGTAATAATTTGAGGAAGTCCAGAACCTTTATGGTGCAGAAGAACCAAAGCTGGTGGATGCAACAGGTAGAAGCGGGAGGAGATAATAATAAAGAGAAAAAGGAGGCGAGGGTGGTGGAATTCCCAGTGTCCCCTCAGCTGATGTATGGGGAAGAGATGGTCCATTTTAGCCATCCTCGACACCGGCTGTCCCGGATGTGCCTTCCGGACCTGTTTACGTGCAGTGGGTGCAAGGAGTACGGTGCAGGCAACCGATTCAGTTGCCAACAATGTGATTTCCAGCTCCACGACTTCTGCGCCTTCTCTCCTCCGGCCCTCAAGGCCCACCCCTTCCATTCCCACCATCACCTTCTCTTTTACTCCAAGCCAGTGAAAGGCGGCATCATGCAGTCCAAGTGCGAGATTTGCGCGAAGCCCATAAAAGGATTTGCGTTCCGATGCGGGGTATGCAGCTTCCAGATGCACCCCTGCTGCGCGATGCTATCCTCGGAAATGAAGGTGCCGTCGATGCACCCACACGAGCTCAGGATGCTGGGAGCTGCAACATCATCATCAGTAGTTGATCAGCCCAGTAACTTGGTGGTGTGCGGTGAGTGTAAGAGGAGGAGGTCCGGGAGGGTGTACCGTTGCACTGTGTGCGAGTATCACGTGCATGCAGTGTGCGCAAAGAGCCTGAAAAACGGCCTCCGTGACAACGGCCACAAGGGAACCGAGAAACCCAGCGTGCTGGGGACCGCCGCAAGACTCGCTTCCCAGGTGGTCGTCGAGTTCTTGGGAGGCATCATCGAGGGCCTCGGAGAAGGGGTTGGCGAAGCCTTCGTCCAGAACATCAACGGCAAGGCCGCCCCCTCACCCCTTCATCATCGTTAA MNKETTSSKGNNLRKSRTFMVQKNQSWWMQQVEAGGDNNKEKKEARVVEFPVSPQLMYGEEMVHFSHPRHRLSRMCLPDLFTCSGCKEYGAGNRFSCQQCDFQLHDFCAFSPPALKAHPFHSHHHLLFYSKPVKGGIMQSKCEICAKPIKGFAFRCGVCSFQMHPCCAMLSSEMKVPSMHPHELRMLGAATSSSVVDQPSNLVVCGECKRRRSGRVYRCTVCEYHVHAVCAKSLKNGLRDNGHKGTEKPSVLGTAARLASQVVVEFLGGIIEGLGEGVGEAFVQNINGKAAPSPLHHR Homology
BLAST of Clc11G20620 vs. NCBI nr
Match: XP_038899107.1 (uncharacterized protein LOC120086497 [Benincasa hispida]) HSP 1 Score: 555.8 bits (1431), Expect = 2.2e-154 Identity = 271/307 (88.27%), Postives = 284/307 (92.51%), Query Frame = 0
BLAST of Clc11G20620 vs. NCBI nr
Match: XP_004145611.2 (uncharacterized protein LOC101220216 [Cucumis sativus] >KGN55555.1 hypothetical protein Csa_012117 [Cucumis sativus]) HSP 1 Score: 509.6 bits (1311), Expect = 1.8e-140 Identity = 251/300 (83.67%), Postives = 262/300 (87.33%), Query Frame = 0
BLAST of Clc11G20620 vs. NCBI nr
Match: XP_008453038.1 (PREDICTED: uncharacterized protein LOC103493863 [Cucumis melo]) HSP 1 Score: 508.8 bits (1309), Expect = 3.1e-140 Identity = 253/307 (82.41%), Postives = 266/307 (86.64%), Query Frame = 0
BLAST of Clc11G20620 vs. NCBI nr
Match: KAG7024068.1 (hypothetical protein SDJN02_12881 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 486.5 bits (1251), Expect = 1.6e-133 Identity = 241/308 (78.25%), Postives = 265/308 (86.04%), Query Frame = 0
BLAST of Clc11G20620 vs. NCBI nr
Match: XP_022935903.1 (uncharacterized protein LOC111442669 [Cucurbita moschata]) HSP 1 Score: 484.6 bits (1246), Expect = 6.3e-133 Identity = 240/308 (77.92%), Postives = 264/308 (85.71%), Query Frame = 0
BLAST of Clc11G20620 vs. ExPASy TrEMBL
Match: A0A0A0L0U6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G665110 PE=4 SV=1) HSP 1 Score: 509.6 bits (1311), Expect = 8.8e-141 Identity = 251/300 (83.67%), Postives = 262/300 (87.33%), Query Frame = 0
BLAST of Clc11G20620 vs. ExPASy TrEMBL
Match: A0A1S3BWE6 (uncharacterized protein LOC103493863 OS=Cucumis melo OX=3656 GN=LOC103493863 PE=4 SV=1) HSP 1 Score: 508.8 bits (1309), Expect = 1.5e-140 Identity = 253/307 (82.41%), Postives = 266/307 (86.64%), Query Frame = 0
BLAST of Clc11G20620 vs. ExPASy TrEMBL
Match: A0A6J1FBT4 (uncharacterized protein LOC111442669 OS=Cucurbita moschata OX=3662 GN=LOC111442669 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 3.0e-133 Identity = 240/308 (77.92%), Postives = 264/308 (85.71%), Query Frame = 0
BLAST of Clc11G20620 vs. ExPASy TrEMBL
Match: A0A6J1IG90 (uncharacterized protein LOC111476973 OS=Cucurbita maxima OX=3661 GN=LOC111476973 PE=4 SV=1) HSP 1 Score: 479.2 bits (1232), Expect = 1.3e-131 Identity = 238/308 (77.27%), Postives = 262/308 (85.06%), Query Frame = 0
BLAST of Clc11G20620 vs. ExPASy TrEMBL
Match: A0A5D3D8V8 (C1_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00210 PE=4 SV=1) HSP 1 Score: 476.1 bits (1224), Expect = 1.1e-130 Identity = 233/282 (82.62%), Postives = 244/282 (86.52%), Query Frame = 0
BLAST of Clc11G20620 vs. TAIR 10
Match: AT1G20990.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 334.0 bits (855), Expect = 1.3e-91 Identity = 161/285 (56.49%), Postives = 210/285 (73.68%), Query Frame = 0
BLAST of Clc11G20620 vs. TAIR 10
Match: AT2G16050.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 100.9 bits (250), Expect = 1.8e-21 Identity = 54/179 (30.17%), Postives = 79/179 (44.13%), Query Frame = 0
BLAST of Clc11G20620 vs. TAIR 10
Match: AT2G37820.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 99.0 bits (245), Expect = 6.9e-21 Identity = 54/187 (28.88%), Postives = 86/187 (45.99%), Query Frame = 0
BLAST of Clc11G20620 vs. TAIR 10
Match: AT2G37800.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 93.2 bits (230), Expect = 3.8e-19 Identity = 62/213 (29.11%), Postives = 91/213 (42.72%), Query Frame = 0
BLAST of Clc11G20620 vs. TAIR 10
Match: AT2G37810.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 89.0 bits (219), Expect = 7.1e-18 Identity = 56/171 (32.75%), Postives = 75/171 (43.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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