Clc11G15160 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G15160
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Rhomboid-like protein 11
Location	ClcChr11: 26055519 .. 26059722 (-)
RNA-Seq Expression	Clc11G15160
Synteny	Clc11G15160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCCTTCTCATTCGTCAATTGGGTTATCGGATTCTTTGTAGTTTCCAGAGCTGCTCTCAAATTCCCCAACAGAATGATGCAATTGCATTTGCTTCAGCAGCTTCATGGAGGCCGAATTTCAAAACCTCCTACACCATGCAAGCAAATGCCTACCGCTTCCATTTCTCATCTATCAAGCTTCACCTTAACCTCGCTCAGATTCCCTTCTCCGTTGTTCAATCCCTTCTCATCGTCTTTTGCCGTTCCCCAATTTAGAAATGTTCTTCGTCTCCGCGCGCGTTCCGTTTGTGCGAAGCCCATCACGATGTGCAAAATGAACGACGCAGGTTTTCCTTTTCTTTTCCGCTATTTGGAACAATATATATCTGTTTACTTATGATTTTATAGAGGAATTTTTGCTAACGTACGGCGGGATTTTGCGATTTTATTGATGAAGATGTGTGTGCGGTTGAATGAAAGTAAAGAAGAGTTTTGTTTTTAAATGTTTGTTAGATTTGATATCACAGTTGGAGCTGGGAAAACCGCTGCTGAATCGGAAACCGGAGAAGCGTGTGAATGGTATATTCTGGATTATTCTTCTCAACATTGGAATATATGTGGCTGATCACATTTTTCAGGCAGGGTTTCCGTTCTCTCATGTTTTCACGTTGTTGCCTTTCGAATCTTCGATACAGTGAAAAAAAATGCCCTCAAAATATTGCGAGAAAGTTGAGTTGTTGCAGAGCAGTTGGATGATTGTTTTTTAGGTCAATCCTATCATAAAAAGGAGAGTTTTTTTAGGTCAAACCTTTCTGTACTTTTCACCCATCTAGATGAATTAACTATTTGGTAAAGCTGATTGTTATAGGGCTTTAAGAGGATAATCCAATGCTAAGCAGATTAGATTATTAACTTTGGAACTCAAGGACACAACACAACCTATCCAAAAAGATATTAGATACAGAACCAAAGTGAGCTTGCAAAAAAAGGGGGTTCAATTGGTAAATTAATCTATCTATATATATATATACCATCGCAGAGTCAAACAATCGTAACTAAATCCAATAAGTCTTCAAAGTCTCTATGAGAACCACTGAAAGCTCTCCAATTGCACTCCTTCCACTCTTCCCAAAGAATCAACCATTGCAGTTTTCCTCTCGTACATACTTCAGCTTTTCTTTAAACATGACCACAAAGAAAATCCTGAACAATGAATTAGTCTATGGCTTGCTCCAACAAGAACCGAATTTCTAAAATAATCTTTCCCATTATATTGAAGTGTAAGTAGAGCAAAAGGATGCCTTTGGCATTCTCACTATTCTTGCACAAAGCGCCCCAATTGGGAAGAATAAAAGAACCTGAAAACTATTCCTTAAGCATTAAGGGAGTTGAGTTTCCACAACTAAGTTGTTAATAAAAACACTCACCTTTAGTGGGATCCTTCTACTCCAAATATCTATCGCTAACCTGTTGACAATAATGTTTGGAGCCCTCACAGGATGAACAAAGAGGGACTTACTCTCTAGTCTCTCCAAACTTTCAAAGACCAAATCCTTTTGTCCTCTCTGGAATTCAGATCCATACCAGTCAAGAAAACAGTAAAAAAAACTCAGTTTTTGTGTGAGATTCATTCTAAGAGTTAGGTTCATTATAAGCCTATCCACAATTATTAACAATTGGAAGGCTTTCCTATGGTCTTGCTTTAGGTAGAGGTTCCTTTAGGCTGTCCTTTCGGTTTTTGTGTATGAATTAATTTTCTCAGTTTCCTATTAATAAAAAAAGAAAAAAAAGGGTTAGGTTATTTTTCCTCACCTCATCCCACATGTCTGCAATGAACATCTCAAATTCTGCCCATTACAGCTGTTTGCGTACCAGAGCTTTGTTACTCGAGACCTAATTGACTATACCCAAACTTCCTCTCTCCAACAGAAGATAAACCAGTAATCATCAAATTAATTGACCAAAAAAAAGAGAAAAAGAACCAATTTGATTCTTTAAAATTAAAATAAACCTGGCCCAAGTATTAATGTTCATCTTTGGTGAGTTTTTCACCATCGGTTTTAAATGTTAACATTGAAAAGAATGAAGTACTATAACCCCGTTTAATAACCATTTCGCTTCTAGTTTTATATTTTTTTAACACTGTACTTGTTTTCTCACCATTTATTTCTTATAGTTCTCGCCTCTCTTAAAGAAGCATTTGGATTCCCCGTTATTTCATTTATTCAATGAAATGTTTCTTATCTAAAACGAATGAAGCATTTGGATTCTTAGCCAAATTCTAAACAACAAAAGTACTTATAGTTTTCAAAACTTGATAATCGAAATTCTAAACAAAAAAAAGTACTTATAGTTTTCAAAACTTGATAATCCAAATTCTAAACAAAAAAAGTACTTATAGTTTTTAAAACTTGATTGGAAGTAGTGAAGAAAACAATGAAACTCACAAGTGGAAAAAGTACTTGTAAGCTTAATTTTTTAAAAACAAAATATTAAATGGCTATCAAACTGTGCCTAAGTTATCCTTTTTTTACAGGTTCGTAGTGTAGGAGCTTTGTACCTGTATCACAATCGCCCTGCCTGGTATCAATTTTTTACGGCAACATTTTGTCATGCTAATTGGTGAGTTTTTTGTGCTTTCATCATCCAAATTTCAGATTTCTCATCTATTCTTAGGATCAGTGGAGTTTACACACACAAGCAGAAGCTTGCTTATCTTCTCACGAGAATGCAATTTGCTGCTTTTACAAGCATTGTTTAATGTAGTGCTTGCTATTCTTAATGTTTGCAGGAATCATCTCTCTAGCAATCTTTTTTTCTTGTATATATTTGGTGAGAACCACTTTCCAAATCCTTATTATTTTTCTCCCTATATATGGGATCTACCTTCTTTCTGGAAGGTGGAAACCATAAAATAACCAAAATGTTTTGACATTTAATAGTTCCATTTCCTGTGGTCAACAGGGAAACTTGTTGAGGAAGAGGAAGGAAACTTTGCTTTGTGGCTTTCCTATATTCTTACGGGTGTAGGTGCAAACATTGTTTCATGGCTAATTTTACCAAGAAATGCTGTTTCAGTTGGAGCTTCTGGTGCTGTTTTCGGGTTGTTTACCATAAGTGTTCTTGTAAAGGTAACTATCTAAAACATAATGATTCAGCACTCTCATCAGGATTTTAATACATTTTAATTTAGTGATTCCTTCGTGGCAGATGTCTTGGGATTGGCGGAAGATACTTGAAGTCCTTATACTTGGTCAATTCGTTATAGAGAAGGTAATAAGTTCTCTTTCTACCCCTATGTCTATGATCTTAAAAACTTGGATACTGATAACTGATAAGCATCCTTCCCAAATTGGGGATTGGCTTGTCGGAAATGAAGTGATATAGTGTTCCTTCTTTCCATATCCCTAGTTAATTGGTTGTTTGTCAAATCATTCGAATGAATTAATTAGCATCGGTTTTTCTTTTTCTTTCCATAATATAAAAATAATCTTTTAATTAGCATATTGTCGTCTCAAAAGATCAAGAAACTCCTCTTTCCCATGAATTTGGGAGGCACCTTTTCCAAAAGGGAAAAAGAAGCTTCTTTGGAAGAATTTTATTCAAACGTTCTGCGCGAACATGTGGTCAAATAGAAGAATATTCCAAGAAAAAGAACTCTCTTATTATAGATTTTTCAATGCGTTTTGACATGGTGTAATATTCCTCCTTATTCCTCTCTTTCGTAATCTCTTTATTGGGGCTTCCTCTTTTGTAATTTGCAATTGTGCAAGGCAAAGGTAGGGCAGTTGCTTATCCTAATGTTTTTTCTGGTCATAATAGGTCATGGAAGCAGCTCAAGCGTCGACTGCATTTTCGGGAAGCTTCCGTGGAGGACATTCGTTGCAGAATGTCAACCATGTTGCACATCTCTCCGGGGCACTGGTCGGCGTCCTTCTAGTATGGCTTCTCAGTAGAATTCCTTCTCAATCTCCTGAACAAGATGCATCAACTTTGCATACGAAAGGAAGGTGATTCACAATTCCACTTTGAAATGGAACTGTATTTCAGTTGTACAATATGTGTTCTTGTTTGTATGTTGTCTAAAATATTTTAGCTAGGGTTTTTATTATAGGCCTGTTAATAGCAACATTAGATATAAATCATTTCAATTTCTTCAGACAGAAAATAGCCATGATTTTCTTGACGGTGAAATAGTTATGTCTCGTAAACTAAGTTGACCCG

mRNA sequence

GTTCCTTCTCATTCGTCAATTGGGTTATCGGATTCTTTGTAGTTTCCAGAGCTGCTCTCAAATTCCCCAACAGAATGATGCAATTGCATTTGCTTCAGCAGCTTCATGGAGGCCGAATTTCAAAACCTCCTACACCATGCAAGCAAATGCCTACCGCTTCCATTTCTCATCTATCAAGCTTCACCTTAACCTCGCTCAGATTCCCTTCTCCGTTGTTCAATCCCTTCTCATCGTCTTTTGCCGTTCCCCAATTTAGAAATGTTCTTCGTCTCCGCGCGCGTTCCGTTTGTGCGAAGCCCATCACGATGTGCAAAATGAACGACGCAGATTTGATATCACAGTTGGAGCTGGGAAAACCGCTGCTGAATCGGAAACCGGAGAAGCGTGTGAATGGTATATTCTGGATTATTCTTCTCAACATTGGAATATATGTGGCTGATCACATTTTTCAGGTTCGTAGTGTAGGAGCTTTGTACCTGTATCACAATCGCCCTGCCTGGTATCAATTTTTTACGGCAACATTTTGTCATGCTAATTGGAATCATCTCTCTAGCAATCTTTTTTTCTTGTATATATTTGGGAAACTTGTTGAGGAAGAGGAAGGAAACTTTGCTTTGTGGCTTTCCTATATTCTTACGGGTGTAGGTGCAAACATTGTTTCATGGCTAATTTTACCAAGAAATGCTGTTTCAGTTGGAGCTTCTGGTGCTGTTTTCGGGTTGTTTACCATAAGTGTTCTTGTAAAGATGTCTTGGGATTGGCGGAAGATACTTGAAGTCCTTATACTTGGTCAATTCGTTATAGAGAAGGTCATGGAAGCAGCTCAAGCGTCGACTGCATTTTCGGGAAGCTTCCGTGGAGGACATTCGTTGCAGAATGTCAACCATGTTGCACATCTCTCCGGGGCACTGGTCGGCGTCCTTCTAGTATGGCTTCTCAGTAGAATTCCTTCTCAATCTCCTGAACAAGATGCATCAACTTTGCATACGAAAGGAAGGTGATTCACAATTCCACTTTGAAATGGAACTGTATTTCAGTTGTACAATATGTGTTCTTGTTTGTATGTTGTCTAAAATATTTTAGCTAGGGTTTTTATTATAGGCCTGTTAATAGCAACATTAGATATAAATCATTTCAATTTCTTCAGACAGAAAATAGCCATGATTTTCTTGACGGTGAAATAGTTATGTCTCGTAAACTAAGTTGACCCG

Coding sequence (CDS)

ATGATGCAATTGCATTTGCTTCAGCAGCTTCATGGAGGCCGAATTTCAAAACCTCCTACACCATGCAAGCAAATGCCTACCGCTTCCATTTCTCATCTATCAAGCTTCACCTTAACCTCGCTCAGATTCCCTTCTCCGTTGTTCAATCCCTTCTCATCGTCTTTTGCCGTTCCCCAATTTAGAAATGTTCTTCGTCTCCGCGCGCGTTCCGTTTGTGCGAAGCCCATCACGATGTGCAAAATGAACGACGCAGATTTGATATCACAGTTGGAGCTGGGAAAACCGCTGCTGAATCGGAAACCGGAGAAGCGTGTGAATGGTATATTCTGGATTATTCTTCTCAACATTGGAATATATGTGGCTGATCACATTTTTCAGGTTCGTAGTGTAGGAGCTTTGTACCTGTATCACAATCGCCCTGCCTGGTATCAATTTTTTACGGCAACATTTTGTCATGCTAATTGGAATCATCTCTCTAGCAATCTTTTTTTCTTGTATATATTTGGGAAACTTGTTGAGGAAGAGGAAGGAAACTTTGCTTTGTGGCTTTCCTATATTCTTACGGGTGTAGGTGCAAACATTGTTTCATGGCTAATTTTACCAAGAAATGCTGTTTCAGTTGGAGCTTCTGGTGCTGTTTTCGGGTTGTTTACCATAAGTGTTCTTGTAAAGATGTCTTGGGATTGGCGGAAGATACTTGAAGTCCTTATACTTGGTCAATTCGTTATAGAGAAGGTCATGGAAGCAGCTCAAGCGTCGACTGCATTTTCGGGAAGCTTCCGTGGAGGACATTCGTTGCAGAATGTCAACCATGTTGCACATCTCTCCGGGGCACTGGTCGGCGTCCTTCTAGTATGGCTTCTCAGTAGAATTCCTTCTCAATCTCCTGAACAAGATGCATCAACTTTGCATACGAAAGGAAGGTGA

Protein sequence

MMQLHLLQQLHGGRISKPPTPCKQMPTASISHLSSFTLTSLRFPSPLFNPFSSSFAVPQFRNVLRLRARSVCAKPITMCKMNDADLISQLELGKPLLNRKPEKRVNGIFWIILLNIGIYVADHIFQVRSVGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTAFSGSFRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPSQSPEQDASTLHTKGR

Homology

[Close]

BLAST of Clc11G15160 vs. NCBI nr
Match: XP_038896989.1 (rhomboid-like protein 11, chloroplastic [Benincasa hispida])

HSP 1 Score: 544.3 bits (1401), Expect = 6.9e-151
Identity = 276/306 (90.20%), Postives = 286/306 (93.46%), Query Frame = 0


Query: 2   MQLHLLQQLHGGRISKPPTPCKQMPTASISHLSSFTLTSLRFPSPLFNPFSSSFAVPQFR 61
           MQL  LQQLHG RISKP + CKQMP  SIS LSSFTLTS   PSPLF+PFSSS ++P+F 
Sbjct: 1   MQLQ-LQQLHGCRISKPHSLCKQMPMTSISLLSSFTLTSFSLPSPLFHPFSSSHSLPRFS 60

Query: 62  NVLRLRARSVCAKPITMCKMNDADLISQLELGKPLLNRKPEKRVNGIFWIILLNIGIYVA 121
           +VLRLR RSVCAKPI MCKMNDADLISQLELGKPL NRKPE+RVNGIFWIILLNIGIYVA
Sbjct: 61  DVLRLRTRSVCAKPIAMCKMNDADLISQLELGKPLQNRKPERRVNGIFWIILLNIGIYVA 120

Query: 122 DHIFQVRSVGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFAL 181
           DHIFQVRS+G LYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKL+EEEEGNFAL
Sbjct: 121 DHIFQVRSIGVLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLLEEEEGNFAL 180

Query: 182 WLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQF 241
           WLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQF
Sbjct: 181 WLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQF 240

Query: 242 VIEKVMEAAQASTAFSGSFRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPSQSPEQDAS 301
           VIEKVMEAAQASTA SGSFRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPS S +QDAS
Sbjct: 241 VIEKVMEAAQASTALSGSFRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPSPSHDQDAS 300

Query: 302 TLHTKG 308
           TLHTKG
Sbjct: 301 TLHTKG 305

[Close]

BLAST of Clc11G15160 vs. NCBI nr
Match: XP_023524317.1 (rhomboid-like protein 11, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 528.9 bits (1361), Expect = 3.0e-146
Identity = 268/302 (88.74%), Postives = 279/302 (92.38%), Query Frame = 0


Query: 7   LQQLHGGRISKPPTPCKQMPTASISHLSSFTLTSLRFPSPLFNPFSSSFAVPQFRNVLRL 66
           LQQLHG RI KP    +QM T SI+HLSSF+ +SLRF SPLF+P SSS +V QF NVLRL
Sbjct: 5   LQQLHGSRILKPRGLREQMATTSIAHLSSFSSSSLRFSSPLFHPLSSSLSVAQFSNVLRL 64

Query: 67  RARSVCAKPITMCKMNDADLISQLELGKPLLNRKPEKRVNGIFWIILLNIGIYVADHIFQ 126
           RARS  AKPI MCKMNDADLISQLELGKPL NRKPEKRVNGIFWIILLNIG+YVADHIFQ
Sbjct: 65  RARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQ 124

Query: 127 VRSVGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYI 186
           VRS+GALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYI
Sbjct: 125 VRSIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYI 184

Query: 187 LTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKV 246
           LTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKV
Sbjct: 185 LTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKV 244

Query: 247 MEAAQASTAFSGSFRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPSQSPEQDASTLHTK 306
           MEAAQASTA SGSFRGG +LQNVNHVAHLSGALVGV+LVWLLSRIPSQ P+QDASTLH K
Sbjct: 245 MEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTLHRK 304

Query: 307 GR 309
            R
Sbjct: 305 VR 306

[Close]

BLAST of Clc11G15160 vs. NCBI nr
Match: XP_022981184.1 (rhomboid-like protein 11, chloroplastic [Cucurbita maxima])

HSP 1 Score: 524.6 bits (1350), Expect = 5.6e-145
Identity = 266/302 (88.08%), Postives = 277/302 (91.72%), Query Frame = 0


Query: 7   LQQLHGGRISKPPTPCKQMPTASISHLSSFTLTSLRFPSPLFNPFSSSFAVPQFRNVLRL 66
           LQQLHG RI KP    +QM T SI+HLS F+ +SLRF SPLF+P SSS +V QF NVLRL
Sbjct: 5   LQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSSSISVAQFSNVLRL 64

Query: 67  RARSVCAKPITMCKMNDADLISQLELGKPLLNRKPEKRVNGIFWIILLNIGIYVADHIFQ 126
           RARS  AKPI MCKMNDADLISQLELGKPL NRKPEKRVNGIFWIILLNIG+YVADHIFQ
Sbjct: 65  RARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQ 124

Query: 127 VRSVGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYI 186
           VRS+G LYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYI
Sbjct: 125 VRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYI 184

Query: 187 LTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKV 246
           LTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKV
Sbjct: 185 LTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKV 244

Query: 247 MEAAQASTAFSGSFRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPSQSPEQDASTLHTK 306
           MEAAQASTA SGSFRGG +LQNVNHVAHLSGALVGV+LVWLLSRIPSQ P+QDASTLH K
Sbjct: 245 MEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTLHRK 304

Query: 307 GR 309
            R
Sbjct: 305 VR 306

[Close]

BLAST of Clc11G15160 vs. NCBI nr
Match: XP_022940340.1 (rhomboid-like protein 11, chloroplastic [Cucurbita moschata])

HSP 1 Score: 518.5 bits (1334), Expect = 4.0e-143
Identity = 265/303 (87.46%), Postives = 276/303 (91.09%), Query Frame = 0


Query: 7   LQQLHGGRISKPPTPCKQMPTASISHLSSFTLTSLRFPSPLFNPFSSSFAVPQFRNVLRL 66
           LQQLHG RI KP    +QM T SI+HLS F+ +SLRF SPLF+P S+S +V QF NVLRL
Sbjct: 5   LQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSASLSVAQFSNVLRL 64

Query: 67  RARSVCAKPITMCKMNDADLISQLELGKPLLNRKPEKRVNGIFWIILLNIGIYVADHIFQ 126
           RARS  AKPI MCKMNDADLISQLELGKPL NRKPEKRVNGIFWIILLNIG+YVADHIFQ
Sbjct: 65  RARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQ 124

Query: 127 VRSVGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYI 186
           VRS+G LYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYI
Sbjct: 125 VRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYI 184

Query: 187 LTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKV 246
           LTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKV
Sbjct: 185 LTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKV 244

Query: 247 MEAAQASTAFSGSFRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPSQSP-EQDASTLHT 306
           MEAAQASTA SGSFRGG +LQNVNHVAHLSGALVGV LVWLLSRIPSQ P +QDASTLH 
Sbjct: 245 MEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVFLVWLLSRIPSQPPDDQDASTLHR 304

Query: 307 KGR 309
           K R
Sbjct: 305 KVR 307

[Close]

BLAST of Clc11G15160 vs. NCBI nr
Match: XP_008466245.1 (PREDICTED: rhomboid-like protein 11, chloroplastic isoform X1 [Cucumis melo] >TYK31329.1 rhomboid-like protein 11 [Cucumis melo var. makuwa])

HSP 1 Score: 512.7 bits (1319), Expect = 2.2e-141
Identity = 266/309 (86.08%), Postives = 275/309 (89.00%), Query Frame = 0


Query: 2   MQLHLLQ-QLHGGRISKPPT-PCKQMPTASISHLSSFTLTSLRFPSPLFNPFSSSFAVPQ 61
           MQ  L Q QLHGGRISKPPT    QMP  SIS  SSFTLTSLRFPSP F+      ++PQ
Sbjct: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFH------SLPQ 60

Query: 62  FRNVLRLRARSVCAKPITMCKMNDADLISQLELGKPLLNRKPEKRVNGIFWIILLNIGIY 121
           F +VL L +RS C KPI  CKMNDADLISQLELGKPL NRK EKRVNGIFWIILLNIGIY
Sbjct: 61  FTHVLPLHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIY 120

Query: 122 VADHIFQVRSVGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 181
           VADHIFQVR++GALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF
Sbjct: 121 VADHIFQVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180

Query: 182 ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 241
           ALWLSYILTGVGAN+VSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG
Sbjct: 181 ALWLSYILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240

Query: 242 QFVIEKVMEAAQASTAFSGSFRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPSQSPEQD 301
           QFVIEKVMEAAQASTA SGSFRGGH  QNVNHVAHLSGALVGVLLVWLLSRIPSQS +QD
Sbjct: 241 QFVIEKVMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQD 300

Query: 302 ASTLHTKGR 309
           AS LH KGR
Sbjct: 301 ASALHRKGR 303

[Close]

BLAST of Clc11G15160 vs. ExPASy Swiss-Prot
Match: Q84MB5 (Rhomboid-like protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL11 PE=1 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 5.2e-101
Identity = 188/269 (69.89%), Postives = 214/269 (79.55%), Query Frame = 0


Query: 32  HLSSFTLTSLRFP-SPLFNPFSSSFAVPQFRNVLRLRARSVCAKPITMCKMNDADLISQL 91
           H  S   +SLRF   PL    ++S      +  L+ R  +V    IT C+ + +D+  Q 
Sbjct: 8   HRLSLPQSSLRFRFPPLHRRRAASSPTNSTQPPLQFRPLTVSRSQIT-CRFSQSDITPQF 67

Query: 92  ELGKPLLNRKPEKRVNGIFWIILLNIGIYVADHIFQVRSVGALYLYHNRPAWYQFFTATF 151
           EL K   NRKP+KR NGIFWIIL+N+GIY+ADH FQVR + +LYLYHN PAWYQF TATF
Sbjct: 68  ELDKAKDNRKPQKRANGIFWIILINLGIYLADHFFQVRGIKSLYLYHNFPAWYQFVTATF 127

Query: 152 CHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVGAS 211
           CHANWNHLSSNLFFLYIFGKLVEEEEGNF LWLSY+ TGVGAN+VSWL+LPRNAVSVGAS
Sbjct: 128 CHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYLFTGVGANLVSWLVLPRNAVSVGAS 187

Query: 212 GAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTAFSGSFRGGHSLQNVN 271
           GAVFGLF ISVLVKMSWDWRKILEVLILGQFVIE+VMEAAQAS   SG+  GG+SLQ VN
Sbjct: 188 GAVFGLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAAQASAGLSGTIYGGYSLQTVN 247

Query: 272 HVAHLSGALVGVLLVWLLSRIPSQSPEQD 300
           H+AHLSGALVGV+LVWLLS+ PS S +QD
Sbjct: 248 HIAHLSGALVGVVLVWLLSKFPSASMDQD 275

[Close]

BLAST of Clc11G15160 vs. ExPASy Swiss-Prot
Match: Q8VZ48 (RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.7e-06
Identity = 47/159 (29.56%), Postives = 80/159 (50.31%), Query Frame = 0


Query: 143 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 202
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L +
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFL-Q 157

Query: 203 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTAFSGS 262
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I   +            
Sbjct: 158 KSISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFIIAINLAIG--------- 217

Query: 263 FRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPSQSPEQ 299
                 L  V++ AH+ G L G  L ++L   P    E+
Sbjct: 218 -----LLPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEE 240

[Close]

BLAST of Clc11G15160 vs. ExPASy Swiss-Prot
Match: P96617 (Putative rhomboid protease YdcA OS=Bacillus subtilis (strain 168) OX=224308 GN=ydcA PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.2e-06
Identity = 42/146 (28.77%), Postives = 69/146 (47.26%), Query Frame = 0


Query: 142 WYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILP 201
           W++  T    HA + HL  N   +++F   +E   G     L Y  +G+  NI +++  P
Sbjct: 58  WWRLITPILLHAGFTHLLFNSMSIFLFAPALERMLGKARFLLVYAGSGIIGNIGTYVTEP 117

Query: 202 RNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTAFSGSFR 261
            + V VGASGA+FGLF + + +           VL   + + ++  +      AF+    
Sbjct: 118 LDYVHVGASGAIFGLFGVYLFM-----------VLFRNELIGQEHSKMIITLLAFAVLMS 177

Query: 262 GGHSLQNVNHVAHLSGALVGVLLVWL 288
             +S  N+N +AHL G   G LL +L
Sbjct: 178 FINS--NINMMAHLFGLCGGFLLSFL 190

[Close]

BLAST of Clc11G15160 vs. ExPASy Swiss-Prot
Match: Q0WQX7 (RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 5.3e-05
Identity = 47/161 (29.19%), Postives = 77/161 (47.83%), Query Frame = 0


Query: 127 VRSVGAL---YLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWL 186
           +  +GAL    + H    W + FT  + HA   H+ +N+  L   G  +E+E G   + L
Sbjct: 112 LEKMGALDVSMVVHKHEVW-RLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGL 171

Query: 187 SYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVI 246
            Y+++G G +++S L   R  +SVGASGA+FGL   ++L ++  +W      +   +F  
Sbjct: 172 LYMISGFGGSLLSSL-FNRAGISVGASGALFGLLG-AMLSELLTNW-----TIYANKFAA 231

Query: 247 EKVMEAAQASTAFSGSFRGGHSLQNVNHVAHLSGALVGVLL 285
              +    A     G       L +V++ AHL G   G LL
Sbjct: 232 LLTLIFIIAINLAVG------ILPHVDNFAHLGGFTSGFLL 258

[Close]

BLAST of Clc11G15160 vs. ExPASy Swiss-Prot
Match: Q9CAN1 (RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 5.3e-05
Identity = 44/155 (28.39%), Postives = 75/155 (48.39%), Query Frame = 0


Query: 137 HNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVS 196
           H    W +  +  + HA   HL +N+  L   G  +E++ G   + L Y+++G+G +I+S
Sbjct: 106 HEHQGW-RLLSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILS 165

Query: 197 WLILPRNAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQAS 256
            L L + ++SVGASGA+FGL   ++L ++  +W         LI   F+I   +      
Sbjct: 166 SLFL-QESISVGASGALFGLLG-AMLSELLTNWTIYANKAAALITLLFIIAINLALGM-- 225

Query: 257 TAFSGSFRGGHSLQNVNHVAHLSGALVGVLLVWLL 289
                       L  V++ AH+ G L G  L ++L
Sbjct: 226 ------------LPRVDNFAHIGGFLTGFCLGFVL 243

[Close]

BLAST of Clc11G15160 vs. ExPASy TrEMBL
Match: A0A6J1J179 (rhomboid-like protein 11, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111480404 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 2.7e-145
Identity = 266/302 (88.08%), Postives = 277/302 (91.72%), Query Frame = 0


Query: 7   LQQLHGGRISKPPTPCKQMPTASISHLSSFTLTSLRFPSPLFNPFSSSFAVPQFRNVLRL 66
           LQQLHG RI KP    +QM T SI+HLS F+ +SLRF SPLF+P SSS +V QF NVLRL
Sbjct: 5   LQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSSSISVAQFSNVLRL 64

Query: 67  RARSVCAKPITMCKMNDADLISQLELGKPLLNRKPEKRVNGIFWIILLNIGIYVADHIFQ 126
           RARS  AKPI MCKMNDADLISQLELGKPL NRKPEKRVNGIFWIILLNIG+YVADHIFQ
Sbjct: 65  RARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQ 124

Query: 127 VRSVGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYI 186
           VRS+G LYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYI
Sbjct: 125 VRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYI 184

Query: 187 LTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKV 246
           LTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKV
Sbjct: 185 LTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKV 244

Query: 247 MEAAQASTAFSGSFRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPSQSPEQDASTLHTK 306
           MEAAQASTA SGSFRGG +LQNVNHVAHLSGALVGV+LVWLLSRIPSQ P+QDASTLH K
Sbjct: 245 MEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTLHRK 304

Query: 307 GR 309
            R
Sbjct: 305 VR 306

[Close]

BLAST of Clc11G15160 vs. ExPASy TrEMBL
Match: A0A6J1FQ99 (rhomboid-like protein 11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445986 PE=3 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 2.0e-143
Identity = 265/303 (87.46%), Postives = 276/303 (91.09%), Query Frame = 0


Query: 7   LQQLHGGRISKPPTPCKQMPTASISHLSSFTLTSLRFPSPLFNPFSSSFAVPQFRNVLRL 66
           LQQLHG RI KP    +QM T SI+HLS F+ +SLRF SPLF+P S+S +V QF NVLRL
Sbjct: 5   LQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSASLSVAQFSNVLRL 64

Query: 67  RARSVCAKPITMCKMNDADLISQLELGKPLLNRKPEKRVNGIFWIILLNIGIYVADHIFQ 126
           RARS  AKPI MCKMNDADLISQLELGKPL NRKPEKRVNGIFWIILLNIG+YVADHIFQ
Sbjct: 65  RARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQ 124

Query: 127 VRSVGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYI 186
           VRS+G LYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYI
Sbjct: 125 VRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYI 184

Query: 187 LTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKV 246
           LTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKV
Sbjct: 185 LTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKV 244

Query: 247 MEAAQASTAFSGSFRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPSQSP-EQDASTLHT 306
           MEAAQASTA SGSFRGG +LQNVNHVAHLSGALVGV LVWLLSRIPSQ P +QDASTLH 
Sbjct: 245 MEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVFLVWLLSRIPSQPPDDQDASTLHR 304

Query: 307 KGR 309
           K R
Sbjct: 305 KVR 307

[Close]

BLAST of Clc11G15160 vs. ExPASy TrEMBL
Match: A0A5D3E659 (Rhomboid-like protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006290 PE=3 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 1.1e-141
Identity = 266/309 (86.08%), Postives = 275/309 (89.00%), Query Frame = 0


Query: 2   MQLHLLQ-QLHGGRISKPPT-PCKQMPTASISHLSSFTLTSLRFPSPLFNPFSSSFAVPQ 61
           MQ  L Q QLHGGRISKPPT    QMP  SIS  SSFTLTSLRFPSP F+      ++PQ
Sbjct: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFH------SLPQ 60

Query: 62  FRNVLRLRARSVCAKPITMCKMNDADLISQLELGKPLLNRKPEKRVNGIFWIILLNIGIY 121
           F +VL L +RS C KPI  CKMNDADLISQLELGKPL NRK EKRVNGIFWIILLNIGIY
Sbjct: 61  FTHVLPLHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIY 120

Query: 122 VADHIFQVRSVGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 181
           VADHIFQVR++GALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF
Sbjct: 121 VADHIFQVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180

Query: 182 ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 241
           ALWLSYILTGVGAN+VSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG
Sbjct: 181 ALWLSYILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240

Query: 242 QFVIEKVMEAAQASTAFSGSFRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPSQSPEQD 301
           QFVIEKVMEAAQASTA SGSFRGGH  QNVNHVAHLSGALVGVLLVWLLSRIPSQS +QD
Sbjct: 241 QFVIEKVMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQD 300

Query: 302 ASTLHTKGR 309
           AS LH KGR
Sbjct: 301 ASALHRKGR 303

[Close]

BLAST of Clc11G15160 vs. ExPASy TrEMBL
Match: A0A1S3CQS6 (rhomboid-like protein 11, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503716 PE=3 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 1.1e-141
Identity = 266/309 (86.08%), Postives = 275/309 (89.00%), Query Frame = 0


Query: 2   MQLHLLQ-QLHGGRISKPPT-PCKQMPTASISHLSSFTLTSLRFPSPLFNPFSSSFAVPQ 61
           MQ  L Q QLHGGRISKPPT    QMP  SIS  SSFTLTSLRFPSP F+      ++PQ
Sbjct: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFH------SLPQ 60

Query: 62  FRNVLRLRARSVCAKPITMCKMNDADLISQLELGKPLLNRKPEKRVNGIFWIILLNIGIY 121
           F +VL L +RS C KPI  CKMNDADLISQLELGKPL NRK EKRVNGIFWIILLNIGIY
Sbjct: 61  FTHVLPLHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIY 120

Query: 122 VADHIFQVRSVGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 181
           VADHIFQVR++GALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF
Sbjct: 121 VADHIFQVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180

Query: 182 ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 241
           ALWLSYILTGVGAN+VSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG
Sbjct: 181 ALWLSYILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240

Query: 242 QFVIEKVMEAAQASTAFSGSFRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPSQSPEQD 301
           QFVIEKVMEAAQASTA SGSFRGGH  QNVNHVAHLSGALVGVLLVWLLSRIPSQS +QD
Sbjct: 241 QFVIEKVMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQD 300

Query: 302 ASTLHTKGR 309
           AS LH KGR
Sbjct: 301 ASALHRKGR 303

[Close]

BLAST of Clc11G15160 vs. ExPASy TrEMBL
Match: A0A5A7TAW2 (Rhomboid-like protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G002620 PE=3 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 2.6e-140
Identity = 266/310 (85.81%), Postives = 275/310 (88.71%), Query Frame = 0


Query: 2   MQLHLLQ-QLHGGRISKPPT-PCKQMPTASISHLSSFTLTSLRFPSPLFNPFSSSFAVPQ 61
           MQ  L Q QLHGGRISKPPT    QMP  SIS  SSFTLTSLRFPSP F+      ++PQ
Sbjct: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFH------SLPQ 60

Query: 62  FRNVLRLRARSVCAKPITMCKMNDADLISQLELGKPLLNRKPEKRVNGIFWIILLNIGIY 121
           F +VL L +RS C KPI  CKMNDADLISQLELGKPL NRK EKRVNGIFWIILLNIGIY
Sbjct: 61  FTHVLPLHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIY 120

Query: 122 VADHIFQVRSVGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 181
           VADHIFQVR++GALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF
Sbjct: 121 VADHIFQVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180

Query: 182 ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 241
           ALWLSYILTGVGAN+VSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG
Sbjct: 181 ALWLSYILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240

Query: 242 QFVIEK-VMEAAQASTAFSGSFRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPSQSPEQ 301
           QFVIEK VMEAAQASTA SGSFRGGH  QNVNHVAHLSGALVGVLLVWLLSRIPSQS +Q
Sbjct: 241 QFVIEKVVMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQ 300

Query: 302 DASTLHTKGR 309
           DAS LH KGR
Sbjct: 301 DASALHRKGR 304

[Close]

BLAST of Clc11G15160 vs. TAIR 10
Match: AT5G25752.1 (rhomboid-like protein 11 )

HSP 1 Score: 369.0 bits (946), Expect = 3.7e-102
Identity = 188/269 (69.89%), Postives = 214/269 (79.55%), Query Frame = 0


Query: 32  HLSSFTLTSLRFP-SPLFNPFSSSFAVPQFRNVLRLRARSVCAKPITMCKMNDADLISQL 91
           H  S   +SLRF   PL    ++S      +  L+ R  +V    IT C+ + +D+  Q 
Sbjct: 8   HRLSLPQSSLRFRFPPLHRRRAASSPTNSTQPPLQFRPLTVSRSQIT-CRFSQSDITPQF 67

Query: 92  ELGKPLLNRKPEKRVNGIFWIILLNIGIYVADHIFQVRSVGALYLYHNRPAWYQFFTATF 151
           EL K   NRKP+KR NGIFWIIL+N+GIY+ADH FQVR + +LYLYHN PAWYQF TATF
Sbjct: 68  ELDKAKDNRKPQKRANGIFWIILINLGIYLADHFFQVRGIKSLYLYHNFPAWYQFVTATF 127

Query: 152 CHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVGAS 211
           CHANWNHLSSNLFFLYIFGKLVEEEEGNF LWLSY+ TGVGAN+VSWL+LPRNAVSVGAS
Sbjct: 128 CHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYLFTGVGANLVSWLVLPRNAVSVGAS 187

Query: 212 GAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTAFSGSFRGGHSLQNVN 271
           GAVFGLF ISVLVKMSWDWRKILEVLILGQFVIE+VMEAAQAS   SG+  GG+SLQ VN
Sbjct: 188 GAVFGLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAAQASAGLSGTIYGGYSLQTVN 247

Query: 272 HVAHLSGALVGVLLVWLLSRIPSQSPEQD 300
           H+AHLSGALVGV+LVWLLS+ PS S +QD
Sbjct: 248 HIAHLSGALVGVVLVWLLSKFPSASMDQD 275

[Close]

BLAST of Clc11G15160 vs. TAIR 10
Match: AT5G25640.1 (Rhomboid-related intramembrane serine protease family protein )

HSP 1 Score: 116.7 bits (291), Expect = 3.3e-26
Identity = 57/85 (67.06%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 165 LYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVK 224
           L++ GK+VEEE+GNF LWLSY+ TGVGAN+VSW  LP N+   GASGAVFGLF ISVLVK
Sbjct: 5   LWLTGKIVEEEKGNFGLWLSYLFTGVGANMVSWFTLPPNSFFSGASGAVFGLFVISVLVK 64

Query: 225 MSWDWRKILEVLILGQFVIEKVMEA 250
           MS  W K LEVLILGQFV+++ +++
Sbjct: 65  MSRGWSKFLEVLILGQFVMKRFIDS 89

[Close]

BLAST of Clc11G15160 vs. TAIR 10
Match: AT1G12750.1 (RHOMBOID-like protein 6 )

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-07
Identity = 47/159 (29.56%), Postives = 80/159 (50.31%), Query Frame = 0


Query: 143 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 202
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L +
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFL-Q 157

Query: 203 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTAFSGS 262
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I   +            
Sbjct: 158 KSISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFIIAINLAIG--------- 217

Query: 263 FRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPSQSPEQ 299
                 L  V++ AH+ G L G  L ++L   P    E+
Sbjct: 218 -----LLPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEE 240

[Close]

BLAST of Clc11G15160 vs. TAIR 10
Match: AT1G12750.2 (RHOMBOID-like protein 6 )

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-07
Identity = 47/159 (29.56%), Postives = 80/159 (50.31%), Query Frame = 0


Query: 143 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 202
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L +
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFL-Q 157

Query: 203 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTAFSGS 262
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I   +            
Sbjct: 158 KSISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFIIAINLAIG--------- 217

Query: 263 FRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPSQSPEQ 299
                 L  V++ AH+ G L G  L ++L   P    E+
Sbjct: 218 -----LLPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEE 240

[Close]

BLAST of Clc11G15160 vs. TAIR 10
Match: AT1G12750.3 (RHOMBOID-like protein 6 )

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-07
Identity = 47/159 (29.56%), Postives = 80/159 (50.31%), Query Frame = 0


Query: 143 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 202
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L +
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFL-Q 157

Query: 203 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTAFSGS 262
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I   +            
Sbjct: 158 KSISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFIIAINLAIG--------- 217

Query: 263 FRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPSQSPEQ 299
                 L  V++ AH+ G L G  L ++L   P    E+
Sbjct: 218 -----LLPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEE 240

The following BLAST results are available for this feature:

BLAST of Clc11G15160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896989.1	6.9e-151	90.20	rhomboid-like protein 11, chloroplastic [Benincasa hispida]	[more]
XP_023524317.1	3.0e-146	88.74	rhomboid-like protein 11, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022981184.1	5.6e-145	88.08	rhomboid-like protein 11, chloroplastic [Cucurbita maxima]	[more]
XP_022940340.1	4.0e-143	87.46	rhomboid-like protein 11, chloroplastic [Cucurbita moschata]	[more]
XP_008466245.1	2.2e-141	86.08	PREDICTED: rhomboid-like protein 11, chloroplastic isoform X1 [Cucumis melo] >TY...	[more]

BLAST of Clc11G15160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84MB5	5.2e-101	69.89	Rhomboid-like protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL11...	[more]
Q8VZ48	3.7e-06	29.56	RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 P...	[more]
P96617	8.2e-06	28.77	Putative rhomboid protease YdcA OS=Bacillus subtilis (strain 168) OX=224308 GN=y...	[more]
Q0WQX7	5.3e-05	29.19	RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1	[more]
Q9CAN1	5.3e-05	28.39	RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1	[more]

BLAST of Clc11G15160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J179	2.7e-145	88.08	rhomboid-like protein 11, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111480...	[more]
A0A6J1FQ99	2.0e-143	87.46	rhomboid-like protein 11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A5D3E659	1.1e-141	86.08	Rhomboid-like protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CQS6	1.1e-141	86.08	rhomboid-like protein 11, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5A7TAW2	2.6e-140	85.81	Rhomboid-like protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of Clc11G15160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25752.1	3.7e-102	69.89	rhomboid-like protein 11	[more]
AT5G25640.1	3.3e-26	67.06	Rhomboid-related intramembrane serine protease family protein	[more]
AT1G12750.1	2.6e-07	29.56	RHOMBOID-like protein 6	[more]
AT1G12750.2	2.6e-07	29.56	RHOMBOID-like protein 6	[more]
AT1G12750.3	2.6e-07	29.56	RHOMBOID-like protein 6	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 139..291 e-value: 2.6E-29 score: 102.2
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 102..295 e-value: 2.9E-33 score: 117.1
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 106..293
None	No IPR available	PANTHER	PTHR43066	RHOMBOID-RELATED PROTEIN	coord: 1..301
None	No IPR available	PANTHER	PTHR43066:SF5	RHOMBOID-LIKE PROTEIN 11, CHLOROPLASTIC-RELATED	coord: 1..301

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G15160.1	Clc11G15160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity