Clc07G15060 (gene) Watermelon (cordophanus) v2

Overview
NameClc07G15060
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description54S ribosomal protein L51, mitochondrial-like
LocationClcChr07: 29618702 .. 29622638 (-)
RNA-Seq ExpressionClc07G15060
SyntenyClc07G15060
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAAAAGGAAGTAAGAGTAAGAAAACAAGAAAAAACTCATTTCCACGTGTGCAAAATTCCTTTTTTGGGTAATTTTACCCGAATTTGAAGTCGCCAAAAAGTCAAAAAATCTCATTTTTTGAGCTACAATATTCAAGTCGCCAAGAAGAGTAGGTCATCCATAAAAGTAAATGTAATATTTATTTAATACATATAATAATCTAGGTGGATTACAAAGTTACACAACTACAATTATGAGCTACAATATTCATATTCTAAACTATACTCTTCTTCCATGTTCTATAAATAGCGTAGTATATTGTTTTTGTACGATTGAGTTCATTTGTTTTCGATAGTTTCTCTTATATTTTTCTCTCTAATTTTATTCATGCATTGTCATTATAATTTTCAAATGTTAATTTTTTTTTTTGTTTTGGCTCGTTTGATTTAAATTTTATGTTTATTTCTTCTAATTTCTTTTTATTTTTATCTTCTTTAAATATACTTGAATTACTAATCAAATTCCACTTCTTAAAAAAATATATATATACTCAAATTCTTAAAATATATTTTTTAATATTTTTAATCCTAAAATATTAAATAAATTAAATTTTTAAAAAAAAACTTATTTTTCATTTTCTCTTTGTTTATTTATTTTTTAAATATCTTAGCTATCTTTTCTTCTAAACCCTCTTTCACGTTCAGTTCAGCCACCCCCTCCGGCCTTCCTCCTATAACCATCCCCTCCACCCTGCACGCCGTCTCAGCCTTCCGGCGAAATCGCTGCCACAACTACCTCTTGCAGTCGCTCGCCACTTCGAGCAAACGGAGTTACTTATCTCTATTTTTTTTCCCCCTCAAAAACACAGTGGTCGACCCCCTTACCCTCGCCGTTGGTGAGATCGCGCCGCCGCCGCTCATTTTTCGGATCCCAAGGTTTTATTTTTATTTTTGTTTCGTTGCATTATGTTGGTTTATTGTCTCCACCCACGGAGAAGAAAATCAAGAACAACTTTTTTCTTTTTTGATTTATTTTTCAACTAATTTTCAACTAGTCTGCATGAAAAGATAAAACTAAGAATGTATACCTTACAAGTTACTAAATAATAGTAATAATAATTAAAGAGGAAAGAAATGTGCAAGAAGATGACCAAAACAAAAAAGAAAAAGAAAAAAAAATCGCATGTAGTTTGGTTGGGGAAGCAATAAAAAAAAAAAAAAAAAACCAGCAAAATATATTGGACAAACAAAAGAGAAAATGAATTTAAGTGTACTGAACGGCGTTGGGCCTTATTCTTGAATATATTAGAAACTATCAATGCCTATGAACTAGAGCATAGTAGGGGAGAGGCCTTTGCATATGAACTAGCTAGGCATTATATTGATGGTTTCCTTCCTTTTTGCAGAATAAGATGGCTTTGCGAGGTGTTTGGCAGCTTAAGAAGCTGGTTGTTAGCTATTGTGATTGGGGAGGAAGCAGCAGGGGTATCAGGTTTGTTGGTTTGCTAAACTATTGTCTACCAGATTATTTCATTACTGAGAATTTGGGTTTCTTTTGTTCACTGATGGAGGTTTAAGTTTTAACCTGGAAGTACTTTGTATTTACATTTTCAAGCATAATGGTGTCGCTCATCTTGCTTTGTTTTAACTTACGGTATTAAGGTTTGAGTTGCGTTGAAGTAGAAGATATTGGAAATTTCTTGCTTCTAGAAATGAGTTATGCAAAACAGGGTGAAGATAAAGGGTTCTTGGAGTGTGGCGAGGCACATCCGTTTTTCACAAACCGTCCTCTCTATGCCTAAAAACGTACAAATGCCCTTATCTTTTCTTTTGCCTAACCCAAACATGGAATGCCCGTTTATCATCTCTTTAAAAAAAAATTTTAATGTTTGGTAATGGTAGTGATGTTTTAGGAAATTTAACCAGACCATAGGATCATGAAACTTTAAAATTATAGGGTCAAAATCAAAATCAAAACACCATATCGATTGGAATTGGAATTTAACTTATGCTTACTTCTCTCTTATGTAATGAGTTCTGGTTTCTAATTTTAAGCCTAAGTTTAATTTGTATTACCGGACTTGACACGGTTCTACTTTCTTAATAGCCAACAGCATAGGTTTGATATAGATCATATAAGTTGCTTTTGTGGAAGCAAACTGGAAAGAACTGTCCAGCCTCCATGAGAGGCCTTTTGTAAGTTGTCAAATGTATGCTTGGATTTACTTATGCCAAATTCTGTTCTTTTGAGTGTGCTGTTGGGTTAACGGTAGAAAAGATGTAAATCACATTCTCAATCTTGCATATATATCAAATCAATACCTAGATTAACTGGCAACCTTATCTACTAATATTTGCGTCATCATTATGTACGTTCTAGTAGAGTGCATTTGCACACCTTCAATTTGCAGACGATGACACTCTTTTTATCTGCTCAGGGAAGGAGAATTCCTCTAGGAATCTCTATGGTTTTATCATTTGTCTTTGAAGCCTAAAAATTAACCATGAGAAAAGTTCTGTGTTTGGAGTGAAGCCTAGTTGACTTCCTCGGACTCTTTGAGTCAGTATCTTGAATCTTACCTTGGTCTTCCTTTAGAAGATCACTCGAGATCTGTGTGTTTTTGGAACCAGTGGTGGAGAAAGTTCAGAAATGGTTGTCATGGAAAAAAAAAAAAAAAGAAAAATTCTTCTCTGAAGGGGGAAGATTAACCTTGATTTTCTTTTTTTTAATATCCGTGAGTCTCCGGGCTTAGCTTACACACACCTCAAGTAATCTCACAGGACAACCCACTTGACCTTAGAAAGATTAACCTTGATTCAATATGTGTTTAGTAGAATTTCTACATAGTATCTCTTTCTTTTTAGGATGCCCGTCACAGTTAGTCAGAACATTGAAAGGTTAATATGGTTGTGGCATTTCCACTTGGAATCTGATACTCTGTGGCAGAGGATTATTGTGAGCAACTATGGACCTCACCTTTTTGACTGGGTCTCGGGCAGGAAGTTGAAGGGTTATGTCCTATTGGGGATGGGTCAAAACACCTATTTTTGGGAGGATTTCTGGTTAGGTGAGAGACCCCTTTGTGCCTTGTTTCCTCAGCTTTATTCTTTTGGATTGTGACTCCTTTTTGTAATTGGGTGTGGGTTTTTCTTTTTCTTTTCTTCTTCCTTTTCTTGAGCTTGTTTTTTGTGCCTTCTATACATCTATCTCAACGAAAGTATCTGTTCTTATAAAAATAAAAAATAAAAAACTTCCCTTCATCCAGTTCCTCTAAAATAAAGCCAAACCTTCTCTTCCCACCTTTTCGCTGGATGAGACCCGTTTTTTAGCCCAGTCACGAATCACTGGGGTTGGAGCCATGGTCAACCTATCAGTGCATCGTATCGTCTTGCTACTATCGTATGGATTGAAAAATATTGTATGCTGTTACTTCACTAGCAGCCTAAACATTGCATCTCAGTTTCTTAGGAATTTCTTGATTTATAGTTATAGTCGGTTGTCACTATTATTTTTGTGTAGCTTTTACAGTGAAACCCATTTTCTTGAATGATTTGTATCTGATCATTGAATTTGCAGGGCATTTATGGACTCACAATTGCCAGCTTTTAAGGAGAAAAATCCTCAGCTAGAAGTAGTTACTGAGCTCATTCGTGGTCAGCATCCACACTTGAAGGGCTTCTACAGTAATTCTCTCACCCTCTCTCAACTTTTGGTAGTTAATAGTTATAATTTACAAGGTGTTTTAACATTGGGTTTTCCCGTATTCCTTCACTTTCACAGAAAGCAATAATCATCGTGTGGTATGTGTGAAGAATTTGGATCCGGAAGAAATACATTTATGCGCGATGAGACTAAGGAATGCACTGGGACGAAAGGTGGTAAAACTGAGGACAAGACATGTAACCAAAAATCCTAGTGTGCAAGGTACCTGGAACACTGATGTAAGATTTTGA

mRNA sequence

ATGAAAAAAAGGAATTCAGCCACCCCCTCCGGCCTTCCTCCTATAACCATCCCCTCCACCCTGCACGCCGTCTCAGCCTTCCGGCGAAATCGCTGCCACAACTACCTCTTGCAGTCGCTCGCCACTTCGAGCAAACGGAATCGCGCCGCCGCCGCTCATTTTTCGGATCCCAAGAATAAGATGGCTTTGCGAGGTGTTTGGCAGCTTAAGAAGCTGGTTGTTAGCTATTGTGATTGGGGAGGAAGCAGCAGGGGTATCAGGGCATTTATGGACTCACAATTGCCAGCTTTTAAGGAGAAAAATCCTCAGCTAGAAGTAGTTACTGAGCTCATTCGTGGTCAGCATCCACACTTGAAGGGCTTCTACAAAAGCAATAATCATCGTGTGGTATGTGTGAAGAATTTGGATCCGGAAGAAATACATTTATGCGCGATGAGACTAAGGAATGCACTGGGACGAAAGGTGGTAAAACTGAGGACAAGACATGTAACCAAAAATCCTAGTGTGCAAGGTACCTGGAACACTGATGTAAGATTTTGA

Coding sequence (CDS)

ATGAAAAAAAGGAATTCAGCCACCCCCTCCGGCCTTCCTCCTATAACCATCCCCTCCACCCTGCACGCCGTCTCAGCCTTCCGGCGAAATCGCTGCCACAACTACCTCTTGCAGTCGCTCGCCACTTCGAGCAAACGGAATCGCGCCGCCGCCGCTCATTTTTCGGATCCCAAGAATAAGATGGCTTTGCGAGGTGTTTGGCAGCTTAAGAAGCTGGTTGTTAGCTATTGTGATTGGGGAGGAAGCAGCAGGGGTATCAGGGCATTTATGGACTCACAATTGCCAGCTTTTAAGGAGAAAAATCCTCAGCTAGAAGTAGTTACTGAGCTCATTCGTGGTCAGCATCCACACTTGAAGGGCTTCTACAAAAGCAATAATCATCGTGTGGTATGTGTGAAGAATTTGGATCCGGAAGAAATACATTTATGCGCGATGAGACTAAGGAATGCACTGGGACGAAAGGTGGTAAAACTGAGGACAAGACATGTAACCAAAAATCCTAGTGTGCAAGGTACCTGGAACACTGATGTAAGATTTTGA

Protein sequence

MKKRNSATPSGLPPITIPSTLHAVSAFRRNRCHNYLLQSLATSSKRNRAAAAHFSDPKNKMALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Homology
[Close]
BLAST of Clc07G15060 vs. NCBI nr
Match: XP_038877046.1 (54S ribosomal protein L51, mitochondrial [Benincasa hispida])

HSP 1 Score: 251.1 bits (640), Expect = 7.0e-63
Identity = 117/119 (98.32%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 61  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKG 120
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKG 60

Query: 121 FYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF 180
           FYKSNN+RVVCVKN+DPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKSNNNRVVCVKNMDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]
BLAST of Clc07G15060 vs. NCBI nr
Match: XP_004152128.1 (54S ribosomal protein L51, mitochondrial [Cucumis sativus] >XP_004152129.1 54S ribosomal protein L51, mitochondrial [Cucumis sativus] >KGN53023.1 hypothetical protein Csa_015078 [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 2.5e-60
Identity = 111/119 (93.28%), Postives = 118/119 (99.16%), Query Frame = 0 

Query: 61  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKG 120
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFM+SQ+PAFKEKNPQLEVVTELIRGQHPHLKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60

Query: 121 FYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF 180
           F++SNN+RVVCVKN+DPEEIH CAMRLRN+LGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]
BLAST of Clc07G15060 vs. NCBI nr
Match: XP_022979453.1 (54S ribosomal protein L51, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 238.4 bits (607), Expect = 4.7e-59
Identity = 107/119 (89.92%), Postives = 116/119 (97.48%), Query Frame = 0 

Query: 61  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKG 120
           MALRGVWQLKKL+VSYCDWGGSSRGIRAFMDS+LPAF+EKNPQL++VTELIRGQHPHLKG
Sbjct: 1   MALRGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPAFREKNPQLQIVTELIRGQHPHLKG 60

Query: 121 FYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF 180
           FYKSNNHRV+CVKN+DPE+IHL A RLRNALGRKV+KLRTRHVTKNPS QGTWNTDVRF
Sbjct: 61  FYKSNNHRVICVKNMDPEDIHLHATRLRNALGRKVLKLRTRHVTKNPSAQGTWNTDVRF 119

[Close]
BLAST of Clc07G15060 vs. NCBI nr
Match: XP_008454040.1 (PREDICTED: 54S ribosomal protein L51, mitochondrial [Cucumis melo] >XP_008454041.1 PREDICTED: 54S ribosomal protein L51, mitochondrial [Cucumis melo])

HSP 1 Score: 238.0 bits (606), Expect = 6.1e-59
Identity = 110/119 (92.44%), Postives = 116/119 (97.48%), Query Frame = 0 

Query: 61  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKG 120
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFM+SQ+PAFKEKNPQLEVVTEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60

Query: 121 FYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF 180
           FYKSNN+RVVCVKN+DPEEIH CA RLRN+LGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]
BLAST of Clc07G15060 vs. NCBI nr
Match: XP_022158383.1 (54S ribosomal protein L51, mitochondrial [Momordica charantia])

HSP 1 Score: 236.9 bits (603), Expect = 1.4e-58
Identity = 110/119 (92.44%), Postives = 116/119 (97.48%), Query Frame = 0 

Query: 61  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKG 120
           MALRGVWQL+KL+VSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLK 
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKA 60

Query: 121 FYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF 180
           FYK+NN RVVCVKNLDPEEI+L A+RLRNALGRKV+KLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKNNNERVVCVKNLDPEEINLHAVRLRNALGRKVIKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]
BLAST of Clc07G15060 vs. ExPASy Swiss-Prot
Match: Q9UUC8 (54S ribosomal protein L51, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mrpl51 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.6e-12
Identity = 29/105 (27.62%), Postives = 62/105 (59.05%), Query Frame = 0 

Query: 70  KKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV 129
           +++  SYC+WGGSS+G++ F+ ++L +  +++  +E      +G+HP ++ +Y +   +V
Sbjct: 24  RRIEFSYCNWGGSSKGMKEFLSTKLESLAKESQDVEFHVTNRQGKHPLIRAYYNTGREKV 83

Query: 130 VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWN 175
           +C + +    I   A+  R++ G K   ++    + NPSV+G W+
Sbjct: 84  ICTRKMSASSIFQKAILCRDSDGLKPRLIKYPVESTNPSVRGIWS 128

[Close]
BLAST of Clc07G15060 vs. ExPASy Swiss-Prot
Match: Q758S3 (54S ribosomal protein L51, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=MRPL51 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.4e-12
Identity = 39/117 (33.33%), Postives = 66/117 (56.41%), Query Frame = 0 

Query: 66  VWQLKKLVVSYCDWGGSSRGIRAFMDS-QLPAFKEKNPQLEVVTELIRGQHPHLKGFYKS 125
           ++  KK+ + YC+WGGSS+G+R F+ S +L  + EK PQ++    + +  HP LK  Y +
Sbjct: 20  IFPCKKITLQYCNWGGSSQGLRDFLTSKRLAKWAEKYPQIQFEV-VAKAGHPVLKAEYIN 79

Query: 126 NNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTK-------NPSVQGTWN 175
             ++ +CV+NL+ + + L    LR + G ++     RH  K       N SV+G W+
Sbjct: 80  GLNKAICVRNLNVDHVELKLKLLRESSGAQL-----RHYPKNANVLSLNQSVRGVWS 130

[Close]
BLAST of Clc07G15060 vs. ExPASy Swiss-Prot
Match: Q06090 (54S ribosomal protein L51, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL51 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.0e-09
Identity = 35/115 (30.43%), Postives = 68/115 (59.13%), Query Frame = 0 

Query: 66  VWQLKKLVVSYCDWGGSSRGIRAFMDS-QLPAFKEKNP--QLEVVTELIRGQHPHLKGFY 125
           V+  +K+ + +C+WGGSS G+R F+ S +L  + ++ P  Q EV+    +  HP L+  Y
Sbjct: 20  VFPCRKITLQFCNWGGSSEGMRKFLTSKRLDKWGQEFPWIQFEVMR---KSGHPLLRAEY 79

Query: 126 KSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRH---VTKNPSVQGTWN 175
            +   +V+CV+NL+ + +      L+++ G  +++ RT++    + N SV+G W+
Sbjct: 80  TNGREKVICVRNLNIDNVENKLKLLKDSDG-DILRRRTKNDNVESLNSSVRGIWS 130

[Close]
BLAST of Clc07G15060 vs. ExPASy Swiss-Prot
Match: Q99N89 (39S ribosomal protein L43, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl43 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.7e-07
Identity = 34/110 (30.91%), Postives = 52/110 (47.27%), Query Frame = 0 

Query: 64  RGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYK 123
           R V QL++L +S      SSRG R F++ ++  F  +NP + V         P +   Y 
Sbjct: 21  RYVQQLQRLSLSLSRDAPSSRGAREFVEREVTDFARRNPGVVVYVNPRPCAMPRIVAEYL 80

Query: 124 SNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTW 174
           +   R   V +   EEI     +L +  G  V+++R    T NPS+QG W
Sbjct: 81  NGAVREENVNSKSVEEIKSLVQKLADQSGLDVIRIRKPFHTDNPSIQGQW 130

[Close]
BLAST of Clc07G15060 vs. ExPASy Swiss-Prot
Match: Q8N983 (39S ribosomal protein L43, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL43 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.7e-07
Identity = 33/111 (29.73%), Postives = 52/111 (46.85%), Query Frame = 0 

Query: 64  RGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYK 123
           R V QL++L  S    G SSRG R F++ ++  F  +NP + +         P +   Y 
Sbjct: 21  RYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYL 80

Query: 124 SNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWN 175
           +   R   +     EEI     +L +  G  V+++R    T NPS+QG W+
Sbjct: 81  NGAVREESIHCKSVEEISTLVQKLADQSGLDVIRIRKPFHTDNPSIQGQWH 131

[Close]
BLAST of Clc07G15060 vs. ExPASy TrEMBL
Match: A0A0A0KU37 (L51_S25_CI-B8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G011700 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.2e-60
Identity = 111/119 (93.28%), Postives = 118/119 (99.16%), Query Frame = 0 

Query: 61  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKG 120
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFM+SQ+PAFKEKNPQLEVVTELIRGQHPHLKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60

Query: 121 FYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF 180
           F++SNN+RVVCVKN+DPEEIH CAMRLRN+LGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]
BLAST of Clc07G15060 vs. ExPASy TrEMBL
Match: A0A6J1IW90 (54S ribosomal protein L51, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111479166 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.3e-59
Identity = 107/119 (89.92%), Postives = 116/119 (97.48%), Query Frame = 0 

Query: 61  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKG 120
           MALRGVWQLKKL+VSYCDWGGSSRGIRAFMDS+LPAF+EKNPQL++VTELIRGQHPHLKG
Sbjct: 1   MALRGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPAFREKNPQLQIVTELIRGQHPHLKG 60

Query: 121 FYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF 180
           FYKSNNHRV+CVKN+DPE+IHL A RLRNALGRKV+KLRTRHVTKNPS QGTWNTDVRF
Sbjct: 61  FYKSNNHRVICVKNMDPEDIHLHATRLRNALGRKVLKLRTRHVTKNPSAQGTWNTDVRF 119

[Close]
BLAST of Clc07G15060 vs. ExPASy TrEMBL
Match: A0A1S3BXU0 (54S ribosomal protein L51, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494585 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 3.0e-59
Identity = 110/119 (92.44%), Postives = 116/119 (97.48%), Query Frame = 0 

Query: 61  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKG 120
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFM+SQ+PAFKEKNPQLEVVTEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60

Query: 121 FYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF 180
           FYKSNN+RVVCVKN+DPEEIH CA RLRN+LGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]
BLAST of Clc07G15060 vs. ExPASy TrEMBL
Match: A0A6J1DVX7 (54S ribosomal protein L51, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111024881 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 6.6e-59
Identity = 110/119 (92.44%), Postives = 116/119 (97.48%), Query Frame = 0 

Query: 61  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKG 120
           MALRGVWQL+KL+VSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLK 
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKA 60

Query: 121 FYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF 180
           FYK+NN RVVCVKNLDPEEI+L A+RLRNALGRKV+KLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKNNNERVVCVKNLDPEEINLHAVRLRNALGRKVIKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]
BLAST of Clc07G15060 vs. ExPASy TrEMBL
Match: A0A6J1EWV2 (54S ribosomal protein L51, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111439127 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 7.6e-55
Identity = 103/119 (86.55%), Postives = 111/119 (93.28%), Query Frame = 0 

Query: 61  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKG 120
           MALRGVWQL+KL+VSYCDWGGSSRGIRAFMDSQLP FK+KNPQL+VV ELIRGQHPHLK 
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKA 60

Query: 121 FYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF 180
           FYK+NN RVVCV+NLD EEIHL A RLRNALGRKV+KL+TRHVTKNPSVQGTW TDVRF
Sbjct: 61  FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTDVRF 119

[Close]
BLAST of Clc07G15060 vs. TAIR 10
Match: AT3G59650.1 (mitochondrial ribosomal protein L51/S25/CI-B8 family protein )

HSP 1 Score: 210.7 bits (535), Expect = 9.8e-55
Identity = 97/119 (81.51%), Postives = 109/119 (91.60%), Query Frame = 0 

Query: 61  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKG 120
           MALRGVWQLKKLVVSYC+WGGSSRGIRAFM+S+LPA KEKNPQLEV+TEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLVVSYCNWGGSSRGIRAFMESELPALKEKNPQLEVITELSRGQHPYLKG 60

Query: 121 FYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF 180
            Y++ N RVVCVKN+DPEE+ L A RLRN+LGRKVVKLRTRHVTK+PSVQGTW T V+F
Sbjct: 61  IYRNRNERVVCVKNMDPEEVLLNATRLRNSLGRKVVKLRTRHVTKHPSVQGTWTTAVKF 119

[Close]
BLAST of Clc07G15060 vs. TAIR 10
Match: AT3G59650.2 (mitochondrial ribosomal protein L51/S25/CI-B8 family protein )

HSP 1 Score: 195.3 bits (495), Expect = 4.2e-50
Identity = 97/146 (66.44%), Postives = 108/146 (73.97%), Query Frame = 0 

Query: 61  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKG 120
           MALRGVWQLKKLVVSYC+WGGSSRGIRAFM+S+LPA KEKNPQLEV+TEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLVVSYCNWGGSSRGIRAFMESELPALKEKNPQLEVITELSRGQHPYLKG 60

Query: 121 FYK---------------------------SNNHRVVCVKNLDPEEIHLCAMRLRNALGR 180
            Y                            + N RVVCVKN+DPEE+ L A RLRN+LGR
Sbjct: 61  IYSMYISPLLNTILIQRLLILAISLAQFIGNRNERVVCVKNMDPEEVLLNATRLRNSLGR 120

The following BLAST results are available for this feature:
BLAST of Clc07G15060 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038877046.17.0e-6398.3254S ribosomal protein L51, mitochondrial [Benincasa hispida][more]
XP_004152128.12.5e-6093.2854S ribosomal protein L51, mitochondrial [Cucumis sativus] >XP_004152129.1 54S r... [more]
XP_022979453.14.7e-5989.9254S ribosomal protein L51, mitochondrial-like [Cucurbita maxima][more]
XP_008454040.16.1e-5992.44PREDICTED: 54S ribosomal protein L51, mitochondrial [Cucumis melo] >XP_008454041... [more]
XP_022158383.11.4e-5892.4454S ribosomal protein L51, mitochondrial [Momordica charantia][more]
BLAST of Clc07G15060 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9UUC82.6e-1227.6254S ribosomal protein L51, mitochondrial OS=Schizosaccharomyces pombe (strain 97... [more]
Q758S33.4e-1233.3354S ribosomal protein L51, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 /... [more]
Q060906.0e-0930.4354S ribosomal protein L51, mitochondrial OS=Saccharomyces cerevisiae (strain ATC... [more]
Q99N895.7e-0730.9139S ribosomal protein L43, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl43 PE=1... [more]
Q8N9839.7e-0729.7339S ribosomal protein L43, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL43 PE=1 ... [more]
BLAST of Clc07G15060 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KU371.2e-6093.28L51_S25_CI-B8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G0117... [more]
A0A6J1IW902.3e-5989.9254S ribosomal protein L51, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A1S3BXU03.0e-5992.4454S ribosomal protein L51, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494585... [more]
A0A6J1DVX76.6e-5992.4454S ribosomal protein L51, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A6J1EWV27.6e-5586.5554S ribosomal protein L51, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
BLAST of Clc07G15060 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G59650.19.8e-5581.51mitochondrial ribosomal protein L51/S25/CI-B8 family protein [more]
AT3G59650.24.2e-5066.44mitochondrial ribosomal protein L51/S25/CI-B8 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007741Ribosomal protein/NADH dehydrogenase domainSMARTSM00916L51_S25_CI_B8_2coord: 78..151
e-value: 4.7E-13
score: 59.4
IPR007741Ribosomal protein/NADH dehydrogenase domainPFAMPF05047L51_S25_CI-B8coord: 86..136
e-value: 1.6E-8
score: 34.3
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 45..178
e-value: 3.8E-43
score: 148.8
IPR03992739S ribosomal protein L43/54S ribosomal protein L51PANTHERPTHR2139639S RIBOSOMAL PROTEIN L43coord: 61..177
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 68..150

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc07G15060.1Clc07G15060.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032543 mitochondrial translation
cellular_component GO:0005762 mitochondrial large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome