Clc06G07810 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G07810
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	AWPM-19-like family protein
Location	ClcChr06: 8511899 .. 8513150 (+)
RNA-Seq Expression	Clc06G07810
Synteny	Clc06G07810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAAACGATGGCTCAAACCATGGGAAGGAATATGGCAGCTCCATTGCTGTTTCTCAACTTGATTTTATATTTGATTCTCTTAGGTTTTGCTAGTTGGTGCCTTAATAGATACATCAATGGCACAACCTACCATCCTAGTAAGTTTTTTTTTTTTTCCTCTTAATCCTGCCTTTTACATTAAATGCTTGTGGTTCTTGGTGTGTTGGACCAAAAAAAAAAAAAACAAAATTTTCCTTTTTGGGAATTTTTTGAAGAGTAACATATTGACATTTTTACACTTGAGGAAAGTAAATAAATTCTGAGCCTTTTATTGGTAGTAATTATGCTTATATATCCATATTTGATAAAATTATTAAATCATATATTACCGGTTGTAAAATTTGGGACTGGATTTAGTGCCCTTCCATGTTTGGATTTCATTACTAAAAAATTAAAAAGAAAGATATAAGAAAAAATATATTGCTAGATCCAACATATAAACCATATTATGTCCTTTACCATGACACATCTGTCCTAATGATCAAAATCCTTTGTTTGTATGAGTTAAATTTTTTTTTTAAGAGAATCGAGCTATGAACCTTGGTCAGACTAGATATTGATTTAGTTAACCGAAAGAACTATTGATGGTTATTTTGGACTGCACAAGGTATGGGAGGAAACGGAGCGACGCCGTTTTTCTTGACAATGGCAATGTTGACGGCAGTTCTGGGAGTGGCATCAAAACTGGCTGGACTCTACCATATCAGAGCTTGGAGGAGTGACAGCCTCGCCGGAGCGGGATCGACTTCCTTGCTCACTTGGGCTGTAACTGTTCTAGCTTTTGGGTAAATTTTCCATCAACTTCTTATTTCTCCTCTTTTTAGACATGATCAACTCTTAAGATCATTGGTTTTTGTCTCTTTTCCCTTTTCACAGCTTGGCCTGCAAGCAAATCAACATAGGAGGGCACAGAGGGTGGAGGCTGAGAGTGGTGGAAGCTTTCATAATAATCTTGACTTTCACTCAGCTTCTGTATCTGCTCTTGCTCCACGCCGGAATCTTCAGCCGCCGCTATGGCCCTGGTTATTGGGACACCGATTATGGCATGGGCGGAGGAACAGCGGCTCCCGGTGAGCCTCCCAAAGGAACTGCCGGGACCAGGGTGGTTTAGGATAGATGGTTGTGTATGATAGCAGTGGGTTTGGTTTTCTCTTGTTTTCTTTTTCTGTGCAAGAACATAGTTTTCTGGTTCTGTCAATCTGCTTCAAAAC

mRNA sequence

AAAGAAACGATGGCTCAAACCATGGGAAGGAATATGGCAGCTCCATTGCTGTTTCTCAACTTGATTTTATATTTGATTCTCTTAGGTTTTGCTAGTTGGTGCCTTAATAGATACATCAATGGCACAACCTACCATCCTAGTATGGGAGGAAACGGAGCGACGCCGTTTTTCTTGACAATGGCAATGTTGACGGCAGTTCTGGGAGTGGCATCAAAACTGGCTGGACTCTACCATATCAGAGCTTGGAGGAGTGACAGCCTCGCCGGAGCGGGATCGACTTCCTTGCTCACTTGGGCTGTAACTGTTCTAGCTTTTGGCTTGGCCTGCAAGCAAATCAACATAGGAGGGCACAGAGGGTGGAGGCTGAGAGTGGTGGAAGCTTTCATAATAATCTTGACTTTCACTCAGCTTCTGTATCTGCTCTTGCTCCACGCCGGAATCTTCAGCCGCCGCTATGGCCCTGGTTATTGGGACACCGATTATGGCATGGGCGGAGGAACAGCGGCTCCCGGTGAGCCTCCCAAAGGAACTGCCGGGACCAGGGTGGTTTAGGATAGATGGTTGTGTATGATAGCAGTGGGTTTGGTTTTCTCTTGTTTTCTTTTTCTGTGCAAGAACATAGTTTTCTGGTTCTGTCAATCTGCTTCAAAAC

Coding sequence (CDS)

ATGGCTCAAACCATGGGAAGGAATATGGCAGCTCCATTGCTGTTTCTCAACTTGATTTTATATTTGATTCTCTTAGGTTTTGCTAGTTGGTGCCTTAATAGATACATCAATGGCACAACCTACCATCCTAGTATGGGAGGAAACGGAGCGACGCCGTTTTTCTTGACAATGGCAATGTTGACGGCAGTTCTGGGAGTGGCATCAAAACTGGCTGGACTCTACCATATCAGAGCTTGGAGGAGTGACAGCCTCGCCGGAGCGGGATCGACTTCCTTGCTCACTTGGGCTGTAACTGTTCTAGCTTTTGGCTTGGCCTGCAAGCAAATCAACATAGGAGGGCACAGAGGGTGGAGGCTGAGAGTGGTGGAAGCTTTCATAATAATCTTGACTTTCACTCAGCTTCTGTATCTGCTCTTGCTCCACGCCGGAATCTTCAGCCGCCGCTATGGCCCTGGTTATTGGGACACCGATTATGGCATGGGCGGAGGAACAGCGGCTCCCGGTGAGCCTCCCAAAGGAACTGCCGGGACCAGGGTGGTTTAG

Protein sequence

MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV

Homology

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BLAST of Clc06G07810 vs. NCBI nr
Match: XP_038874443.1 (membrane protein PM19L [Benincasa hispida] >XP_038874444.1 membrane protein PM19L [Benincasa hispida])

HSP 1 Score: 356.3 bits (913), Expect = 1.6e-94
Identity = 176/180 (97.78%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAML 60
           MAQTMGRNMAAPLLF+NLI+YLIL+GFASWCLNRYINGTTYHPSMGGNGATPFFLT AML
Sbjct: 1   MAQTMGRNMAAPLLFINLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120
           TAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR
Sbjct: 61  TAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180
           VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180

[Close]

BLAST of Clc06G07810 vs. NCBI nr
Match: XP_008460698.1 (PREDICTED: uncharacterized protein LOC103499466 [Cucumis melo])

HSP 1 Score: 355.9 bits (912), Expect = 2.0e-94
Identity = 176/180 (97.78%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAML 60
           MAQTMGRNMAAPLLFLNLI+YLILLGFASWCLNR+INGTTYHPSMGGNGATPFFLT AML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120
           TAVLG+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180
           VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180

[Close]

BLAST of Clc06G07810 vs. NCBI nr
Match: XP_004147191.1 (membrane protein PM19L [Cucumis sativus] >KGN61555.1 hypothetical protein Csa_006579 [Cucumis sativus])

HSP 1 Score: 354.4 bits (908), Expect = 5.9e-94
Identity = 175/180 (97.22%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAML 60
           MAQTMGRNMAAPLLFLNLI+YLILLGFASWCLNR+INGTTYHPSMGGNGATPFFLT AML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120
           TAVLG+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180
           VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGT GTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTTGTRVV 180

[Close]

BLAST of Clc06G07810 vs. NCBI nr
Match: XP_022959288.1 (uncharacterized protein LOC111460317 [Cucurbita moschata])

HSP 1 Score: 349.0 bits (894), Expect = 2.5e-92
Identity = 172/180 (95.56%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAML 60
           MAQTMGRNMAAPLLFLNLI+Y ILLGFASWC+NRYINGTTYHPSMGGNGATPFFLT AML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120
           TAV+GVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120

Query: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTA PGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAGTRVV 180

[Close]

BLAST of Clc06G07810 vs. NCBI nr
Match: XP_023549469.1 (membrane protein PM19L [Cucurbita pepo subsp. pepo] >KAG7013458.1 hypothetical protein SDJN02_23624, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 347.4 bits (890), Expect = 7.2e-92
Identity = 171/180 (95.00%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAML 60
           MAQTMGRNMAAPLLFLNLI+Y ILLGFASWC+NRYINGTTYHPSMGGNGATPFFLT AML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120
           TAV+GVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120

Query: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG+A PGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180

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BLAST of Clc06G07810 vs. ExPASy Swiss-Prot
Match: Q6L4D2 (Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.1e-49
Identity = 95/156 (60.90%), Postives = 123/156 (78.85%), Query Frame = 0


Query: 5   MGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAMLTAVL 64
           +GR M APLL LNLI+YLI++GFASW LN YING T HP + GNGAT +FL  A+L  V+
Sbjct: 4   VGRTMIAPLLVLNLIMYLIVIGFASWNLNHYINGETNHPGVAGNGATFYFLVFAILAGVV 63

Query: 65  GVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLRVVEA 124
           G ASKLAG++H+R+W + SLA   +++L+ WA+T LAFGLACK+I+IGG+RGWRLRV+EA
Sbjct: 64  GAASKLAGVHHVRSWGAHSLAAGAASALIAWAITALAFGLACKEIHIGGYRGWRLRVLEA 123

Query: 125 FIIILTFTQLLYLLLLHAGIFSRRY--GPGYWDTDY 159
           F+IIL FTQLLY+ +LH G+FS  +  G G +  DY
Sbjct: 124 FVIILAFTQLLYVAMLHGGLFSGNHAAGAGGYGGDY 159

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BLAST of Clc06G07810 vs. ExPASy TrEMBL
Match: A0A1S3CDH8 (uncharacterized protein LOC103499466 OS=Cucumis melo OX=3656 GN=LOC103499466 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 9.8e-95
Identity = 176/180 (97.78%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAML 60
           MAQTMGRNMAAPLLFLNLI+YLILLGFASWCLNR+INGTTYHPSMGGNGATPFFLT AML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120
           TAVLG+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180
           VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180

[Close]

BLAST of Clc06G07810 vs. ExPASy TrEMBL
Match: A0A0A0LI45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G169790 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 2.9e-94
Identity = 175/180 (97.22%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAML 60
           MAQTMGRNMAAPLLFLNLI+YLILLGFASWCLNR+INGTTYHPSMGGNGATPFFLT AML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120
           TAVLG+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180
           VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGT GTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTTGTRVV 180

[Close]

BLAST of Clc06G07810 vs. ExPASy TrEMBL
Match: A0A6J1H5I7 (uncharacterized protein LOC111460317 OS=Cucurbita moschata OX=3662 GN=LOC111460317 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.2e-92
Identity = 172/180 (95.56%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAML 60
           MAQTMGRNMAAPLLFLNLI+Y ILLGFASWC+NRYINGTTYHPSMGGNGATPFFLT AML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120
           TAV+GVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120

Query: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTA PGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAGTRVV 180

[Close]

BLAST of Clc06G07810 vs. ExPASy TrEMBL
Match: A0A6J1KYX7 (uncharacterized protein LOC111498858 OS=Cucurbita maxima OX=3661 GN=LOC111498858 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.1e-89
Identity = 169/180 (93.89%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAML 60
           MAQTMGRNMAAPLLFLNLI+Y ILLGFASWC+NRYINGTTYHPSMGG+  TPFFLT AML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGS-LTPFFLTFAML 60

Query: 61  TAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120
           TAV+GVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120

Query: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTA PGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAGTRVV 179

[Close]

BLAST of Clc06G07810 vs. ExPASy TrEMBL
Match: A0A6J1CDE2 (uncharacterized protein LOC111009705 OS=Momordica charantia OX=3673 GN=LOC111009705 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.2e-85
Identity = 163/180 (90.56%), Postives = 171/180 (95.00%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAML 60
           MAQTMGRNMAAPLLFLNLI+Y IL+GFASWCLNRYINGTTYHPSMGGNGATPFFLT AML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYFILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120
           TAVLGVASKLAGLYHIRAWRSDSLAGAGS S++TWAVTVLAFGLACK+I+IGGHRGWRLR
Sbjct: 61  TAVLGVASKLAGLYHIRAWRSDSLAGAGSASIITWAVTVLAFGLACKEISIGGHRGWRLR 120

Query: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180
           VVEAFIIIL  TQLLY+LLLHAGIFSR YGPGY +TDYGMGGGTAA GE PKGTAGTRVV
Sbjct: 121 VVEAFIIILAVTQLLYILLLHAGIFSREYGPGYRETDYGMGGGTAA-GEVPKGTAGTRVV 179

[Close]

BLAST of Clc06G07810 vs. TAIR 10
Match: AT1G04560.1 (AWPM-19-like family protein )

HSP 1 Score: 249.2 bits (635), Expect = 2.5e-66
Identity = 119/161 (73.91%), Postives = 140/161 (86.96%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSMGGNGATPFFLTMAML 60
           MA T+GRN+AAPLLFLNL++YLI+LGFASWCLN+YING T HPS GGNGATPFFLT ++L
Sbjct: 1   MATTVGRNIAAPLLFLNLVMYLIVLGFASWCLNKYINGQTNHPSFGGNGATPFFLTFSIL 60

Query: 61  TAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120
            AV+GVASKLAG  HIR WR+DSLA AG++S++ WA+T LA GLACKQINIGG RGWRL+
Sbjct: 61  AAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACKQINIGGWRGWRLK 120

Query: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMG 162
           ++EAFIIILTFTQLLYL+L+HAG  S +YGPGY D DY  G
Sbjct: 121 MIEAFIIILTFTQLLYLMLIHAGSLSSKYGPGYRDQDYATG 161

[Close]

BLAST of Clc06G07810 vs. TAIR 10
Match: AT1G29520.1 (AWPM-19-like family protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.2e-22
Identity = 62/154 (40.26%), Postives = 91/154 (59.09%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYI-NGTTYHPSMG------------G 60
           MA    + +A+ LL LN  +Y+I+LG   W +NR I +G    P++             G
Sbjct: 1   MAGEQIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMG 60

Query: 61  NGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACK 120
           N AT FF+  A+L  V+G AS ++GL HIR+W   SL  A + + + W +TVLA G A K
Sbjct: 61  NAATGFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWK 120

Query: 121 QINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLH 142
           +I + G R  +LR +EAF+IIL+ TQL+Y+  +H
Sbjct: 121 EIELQG-RNAKLRTMEAFLIILSVTQLIYIAAVH 153

[Close]

BLAST of Clc06G07810 vs. TAIR 10
Match: AT5G46530.1 (AWPM-19-like family protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.9e-21
Identity = 60/155 (38.71%), Postives = 92/155 (59.35%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYIN-----GTTY---------HPSMG 60
           M +   + +A+ LL LN  +Y I+LG  +W +N+ IN     G  Y         H  M 
Sbjct: 1   MVEHQMKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPM- 60

Query: 61  GNGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLAC 120
           GN AT FF+  A++  V G AS ++G+ H+++W + SL  A S + + W++T+LA G  C
Sbjct: 61  GNAATGFFIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGC 120

Query: 121 KQINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLH 142
           K+I + G R  RLR +EAF+IIL+ TQLLY+  ++
Sbjct: 121 KEIEL-GMRNARLRTMEAFLIILSATQLLYIAAIY 153

[Close]

BLAST of Clc06G07810 vs. TAIR 10
Match: AT5G18970.1 (AWPM-19-like family protein )

HSP 1 Score: 92.8 bits (229), Expect = 3.0e-19
Identity = 59/157 (37.58%), Postives = 87/157 (55.41%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLILYLILLGFASWCLNRYINGTTYHPSM-------------GG 60
           MA    ++ A  LL LNL LY ++   ASW +N  I  T    S               G
Sbjct: 1   MASGGSKSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVG 60

Query: 61  NGATPFFLTMAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACK 120
           N AT FF+   ++  V+G+A+ L G+ ++  W S +L  A ++SL++W++T+LA GLACK
Sbjct: 61  NMATGFFVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACK 120

Query: 121 QINIGGHRGWRLRVVEAFIIILTFTQLLYLLLLHAGI 145
           +INIG      LR +E   II++ TQLL    +HAG+
Sbjct: 121 EINIGWTEA-NLRTLEVLTIIVSATQLLCTGAIHAGV 156

The following BLAST results are available for this feature:

BLAST of Clc06G07810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874443.1	1.6e-94	97.78	membrane protein PM19L [Benincasa hispida] >XP_038874444.1 membrane protein PM19...	[more]
XP_008460698.1	2.0e-94	97.78	PREDICTED: uncharacterized protein LOC103499466 [Cucumis melo]	[more]
XP_004147191.1	5.9e-94	97.22	membrane protein PM19L [Cucumis sativus] >KGN61555.1 hypothetical protein Csa_00...	[more]
XP_022959288.1	2.5e-92	95.56	uncharacterized protein LOC111460317 [Cucurbita moschata]	[more]
XP_023549469.1	7.2e-92	95.00	membrane protein PM19L [Cucurbita pepo subsp. pepo] >KAG7013458.1 hypothetical p...	[more]

BLAST of Clc06G07810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6L4D2	2.1e-49	60.90	Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV...	[more]

BLAST of Clc06G07810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CDH8	9.8e-95	97.78	uncharacterized protein LOC103499466 OS=Cucumis melo OX=3656 GN=LOC103499466 PE=...	[more]
A0A0A0LI45	2.9e-94	97.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G169790 PE=4 SV=1	[more]
A0A6J1H5I7	1.2e-92	95.56	uncharacterized protein LOC111460317 OS=Cucurbita moschata OX=3662 GN=LOC1114603...	[more]
A0A6J1KYX7	2.1e-89	93.89	uncharacterized protein LOC111498858 OS=Cucurbita maxima OX=3661 GN=LOC111498858...	[more]
A0A6J1CDE2	3.2e-85	90.56	uncharacterized protein LOC111009705 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]

BLAST of Clc06G07810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04560.1	2.5e-66	73.91	AWPM-19-like family protein	[more]
AT1G29520.1	2.2e-22	40.26	AWPM-19-like family protein	[more]
AT5G46530.1	1.9e-21	38.71	AWPM-19-like family protein	[more]
AT5G18970.1	3.0e-19	37.58	AWPM-19-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008390	AWPM-19-like	PFAM	PF05512	AWPM-19	coord: 15..143 e-value: 2.8E-50 score: 170.2
IPR008390	AWPM-19-like	PANTHER	PTHR33294	AWPM-19-LIKE FAMILY PROTEIN	coord: 4..168
None	No IPR available	PANTHER	PTHR33294:SF16	BNAC05G02680D PROTEIN	coord: 4..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G07810.1	Clc06G07810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane