Clc06G00210 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G00210
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	TCP family transcription factor family protein
Location	ClcChr06: 199882 .. 200910 (+)
RNA-Seq Expression	Clc06G00210
Synteny	Clc06G00210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATATTCAGAAACAAGAACTCGACGACGACGACGACTCTCCGCCCACCCATCTCCCTATCAATGACTCTGACTCCTCTCGAATCGACCTTCTTTCCCTTCCTCCTAAGCAGGAGCATCCCGATTCCGACGACTCCAACCTCCCCCCCTCCGGAATTCAGCTCCTCAAGTTCACTGCAGACATTGCTAAATCTGTCTCATCTCTCCCGCCCAAGAGACCGTCTACCAAGGATCGCCACACCAAGGTCGAGGGCAGAGGCCGGAGAATCCGAATTCCGGCCACCTGTGCCGCGCGTATCTTCCAGTTGACTCGAGAGCTCGGCCACAAGTCCGACGGCGAAACTATTCGGTGGCTTCTCGAGCGGGCCGAGCCGGCTATCATCGCCGCAACTGGGACTGGTACCATTCCCGCTATCGCCATGTCTGTTAATGGCACTCTCAAAATCCCCACCACCACTTCCTCTTCTAACCAAGATTCTGCCGATCCATCCGCGGCTAAGAAGCGGCGTAAGCGCCCCGCTAACAGTGACTACGTTGACGTAAACGACGCCCTCTCCGTCTCCGTCTCCGCCTCGAATGGCGTCGTTCAGGCCGGTACCGTTGCCGGTTCCCCCGCCGTCCAACAGGCTTTTCCACCGGGGTTCGTTCCAGTGTGGGCCATCCCATCCAACGCCATAATTCCCGGGGCGGTTTTCATGGTACCATCCGTGGCATGTTCTTCCACCCGTCCACAGTTGTTCTCATTTCCGGCTCCGGCGGCGCCGCTCATCAACACGACGGCGCGGCCCATTTCTACCTTCCCGTCGAAGCCAGACACGTCTCACATTCAATCCAGCCCCACCAATCAAAGCTCCAGCACTTCAAGCTCCTCCGCTTCCAAGTCTCAATCTGTGATGGCGCCGATCTCGAGCTCTACCGTTCCAACGTCCGGCAAAACGACGACGCAGATGCTTAGAGACTTCTCGTTGGAGATATACGATAAGGAAGAGCGTCAATTCATGTCTCGCTCGTCCTCAAAACATTGA

mRNA sequence

ATGGCCGATATTCAGAAACAAGAACTCGACGACGACGACGACTCTCCGCCCACCCATCTCCCTATCAATGACTCTGACTCCTCTCGAATCGACCTTCTTTCCCTTCCTCCTAAGCAGGAGCATCCCGATTCCGACGACTCCAACCTCCCCCCCTCCGGAATTCAGCTCCTCAAGTTCACTGCAGACATTGCTAAATCTGTCTCATCTCTCCCGCCCAAGAGACCGTCTACCAAGGATCGCCACACCAAGGTCGAGGGCAGAGGCCGGAGAATCCGAATTCCGGCCACCTGTGCCGCGCGTATCTTCCAGTTGACTCGAGAGCTCGGCCACAAGTCCGACGGCGAAACTATTCGGTGGCTTCTCGAGCGGGCCGAGCCGGCTATCATCGCCGCAACTGGGACTGGTACCATTCCCGCTATCGCCATGTCTGTTAATGGCACTCTCAAAATCCCCACCACCACTTCCTCTTCTAACCAAGATTCTGCCGATCCATCCGCGGCTAAGAAGCGGCGTAAGCGCCCCGCTAACAGTGACTACGTTGACGTAAACGACGCCCTCTCCGTCTCCGTCTCCGCCTCGAATGGCGTCGTTCAGGCCGGTACCGTTGCCGGTTCCCCCGCCGTCCAACAGGCTTTTCCACCGGGGTTCGTTCCAGTGTGGGCCATCCCATCCAACGCCATAATTCCCGGGGCGGTTTTCATGGTACCATCCGTGGCATGTTCTTCCACCCGTCCACAGTTGTTCTCATTTCCGGCTCCGGCGGCGCCGCTCATCAACACGACGGCGCGGCCCATTTCTACCTTCCCGTCGAAGCCAGACACGTCTCACATTCAATCCAGCCCCACCAATCAAAGCTCCAGCACTTCAAGCTCCTCCGCTTCCAAGTCTCAATCTGTGATGGCGCCGATCTCGAGCTCTACCGTTCCAACGTCCGGCAAAACGACGACGCAGATGCTTAGAGACTTCTCGTTGGAGATATACGATAAGGAAGAGCGTCAATTCATGTCTCGCTCGTCCTCAAAACATTGA

Coding sequence (CDS)

ATGGCCGATATTCAGAAACAAGAACTCGACGACGACGACGACTCTCCGCCCACCCATCTCCCTATCAATGACTCTGACTCCTCTCGAATCGACCTTCTTTCCCTTCCTCCTAAGCAGGAGCATCCCGATTCCGACGACTCCAACCTCCCCCCCTCCGGAATTCAGCTCCTCAAGTTCACTGCAGACATTGCTAAATCTGTCTCATCTCTCCCGCCCAAGAGACCGTCTACCAAGGATCGCCACACCAAGGTCGAGGGCAGAGGCCGGAGAATCCGAATTCCGGCCACCTGTGCCGCGCGTATCTTCCAGTTGACTCGAGAGCTCGGCCACAAGTCCGACGGCGAAACTATTCGGTGGCTTCTCGAGCGGGCCGAGCCGGCTATCATCGCCGCAACTGGGACTGGTACCATTCCCGCTATCGCCATGTCTGTTAATGGCACTCTCAAAATCCCCACCACCACTTCCTCTTCTAACCAAGATTCTGCCGATCCATCCGCGGCTAAGAAGCGGCGTAAGCGCCCCGCTAACAGTGACTACGTTGACGTAAACGACGCCCTCTCCGTCTCCGTCTCCGCCTCGAATGGCGTCGTTCAGGCCGGTACCGTTGCCGGTTCCCCCGCCGTCCAACAGGCTTTTCCACCGGGGTTCGTTCCAGTGTGGGCCATCCCATCCAACGCCATAATTCCCGGGGCGGTTTTCATGGTACCATCCGTGGCATGTTCTTCCACCCGTCCACAGTTGTTCTCATTTCCGGCTCCGGCGGCGCCGCTCATCAACACGACGGCGCGGCCCATTTCTACCTTCCCGTCGAAGCCAGACACGTCTCACATTCAATCCAGCCCCACCAATCAAAGCTCCAGCACTTCAAGCTCCTCCGCTTCCAAGTCTCAATCTGTGATGGCGCCGATCTCGAGCTCTACCGTTCCAACGTCCGGCAAAACGACGACGCAGATGCTTAGAGACTTCTCGTTGGAGATATACGATAAGGAAGAGCGTCAATTCATGTCTCGCTCGTCCTCAAAACATTGA

Protein sequence

MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSKH

Homology

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BLAST of Clc06G00210 vs. NCBI nr
Match: XP_038876433.1 (transcription factor TCP9 [Benincasa hispida])

HSP 1 Score: 580.9 bits (1496), Expect = 7.4e-162
Identity = 317/342 (92.69%), Postives = 326/342 (95.32%), Query Frame = 0


Query: 1   MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFT 60
           MADIQKQELDDDDDSP THLPIN SDSSR+DLL LPPKQEHPDS  SNLPPSG+QLL FT
Sbjct: 1   MADIQKQELDDDDDSPSTHLPINHSDSSRLDLLPLPPKQEHPDSHHSNLPPSGMQLLNFT 60

Query: 61  ADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL 120
            DIAK+VS+LPPKR STKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL
Sbjct: 61  PDIAKTVSTLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL 120

Query: 121 LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYV 180
           LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSS QDSADPSAAKKRRKRPANSDYV
Sbjct: 121 LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSIQDSADPSAAKKRRKRPANSDYV 180

Query: 181 DVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240
           DV+ ALSVSVSASNGV+QAGTV GSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC
Sbjct: 181 DVSHALSVSVSASNGVLQAGTVPGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240

Query: 241 SSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM 300
           SSTRPQLFSFPAP APLI+TTARPISTF SKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
Sbjct: 241 SSTRPQLFSFPAPVAPLISTTARPISTFSSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM 300

Query: 301 APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSKH 343
           APISSST  T+GKTTTQMLRDFSLEIY+KEE QFMSRSSSKH
Sbjct: 301 APISSSTAQTTGKTTTQMLRDFSLEIYNKEELQFMSRSSSKH 342

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BLAST of Clc06G00210 vs. NCBI nr
Match: XP_008460149.1 (PREDICTED: transcription factor TCP9 [Cucumis melo])

HSP 1 Score: 545.0 bits (1403), Expect = 4.5e-151
Identity = 306/342 (89.47%), Postives = 313/342 (91.52%), Query Frame = 0


Query: 1   MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFT 60
           MAD QKQELDDDDDSPPTHL INDSDSSR+DLL L PKQEHP   DSNLP     LL F 
Sbjct: 1   MADNQKQELDDDDDSPPTHLRINDSDSSRMDLLPLTPKQEHP---DSNLPH---DLLTFN 60

Query: 61  ADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL 120
            DI K++SSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL
Sbjct: 61  PDIPKTLSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL 120

Query: 121 LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYV 180
           LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA KKRRKRPANSDYV
Sbjct: 121 LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANSDYV 180

Query: 181 DVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240
           DVNDALSVS+SASN       VAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC
Sbjct: 181 DVNDALSVSISASN-------VAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240

Query: 241 SSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM 300
           SSTRPQLFSF APAAP+INTTARPIS FPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
Sbjct: 241 SSTRPQLFSFSAPAAPVINTTARPISAFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM 300

Query: 301 APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSKH 343
           APISSS+V  SGKTTTQMLRDFSLEIYDKEE QFM+RSSSKH
Sbjct: 301 APISSSSVQRSGKTTTQMLRDFSLEIYDKEELQFMTRSSSKH 329

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BLAST of Clc06G00210 vs. NCBI nr
Match: KAA0040018.1 (transcription factor TCP9 [Cucumis melo var. makuwa] >TYK24483.1 transcription factor TCP9 [Cucumis melo var. makuwa])

HSP 1 Score: 536.2 bits (1380), Expect = 2.1e-148
Identity = 301/337 (89.32%), Postives = 308/337 (91.39%), Query Frame = 0


Query: 1   MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFT 60
           MAD QKQELDDDDDSPPTHL INDSDSSR+DLL L PKQEHP   DSNLP     LL F 
Sbjct: 1   MADNQKQELDDDDDSPPTHLRINDSDSSRMDLLPLTPKQEHP---DSNLPH---DLLTFN 60

Query: 61  ADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL 120
            DI K++SSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL
Sbjct: 61  PDIPKTLSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL 120

Query: 121 LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYV 180
           LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA KKRRKRPANSDYV
Sbjct: 121 LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANSDYV 180

Query: 181 DVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240
           DVNDALSVS+SASN       VAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC
Sbjct: 181 DVNDALSVSISASN-------VAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240

Query: 241 SSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM 300
           SSTRPQLFSF APAAP+INTTARPIS FPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
Sbjct: 241 SSTRPQLFSFSAPAAPVINTTARPISAFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM 300

Query: 301 APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSR 338
           APISSS+V  SGKTTTQMLRDFSLEIYDKEE QFM+R
Sbjct: 301 APISSSSVQRSGKTTTQMLRDFSLEIYDKEELQFMTR 324

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BLAST of Clc06G00210 vs. NCBI nr
Match: XP_004145050.1 (transcription factor TCP9 [Cucumis sativus] >KGN46217.1 hypothetical protein Csa_005673 [Cucumis sativus])

HSP 1 Score: 529.6 bits (1363), Expect = 1.9e-146
Identity = 302/342 (88.30%), Postives = 307/342 (89.77%), Query Frame = 0


Query: 1   MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFT 60
           MAD QKQELDDDDDSPPTHL INDSDSSR+DLL L PKQEHP   DSNLP     LL F 
Sbjct: 1   MADNQKQELDDDDDSPPTHLRINDSDSSRMDLLPLTPKQEHP---DSNLPH---DLLTFN 60

Query: 61  ADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL 120
            DI K++SSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL
Sbjct: 61  PDIPKTLSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL 120

Query: 121 LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYV 180
           LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA KKRRKRPANSDYV
Sbjct: 121 LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANSDYV 180

Query: 181 DVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240
           DVNDALSVS+SASN       VAGS AVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC
Sbjct: 181 DVNDALSVSISASN-------VAGSSAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240

Query: 241 SSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM 300
           SSTRPQLFSF  PAAPLINTTARPIS FPSK +TSHIQSSPTNQSSSTSSSSASKSQSVM
Sbjct: 241 SSTRPQLFSFSTPAAPLINTTARPISAFPSKAETSHIQSSPTNQSSSTSSSSASKSQSVM 300

Query: 301 APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSKH 343
           APISSS    SGKTTTQMLRDFSLEIYDKEE QFMS SSSKH
Sbjct: 301 APISSS----SGKTTTQMLRDFSLEIYDKEELQFMSSSSSKH 325

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BLAST of Clc06G00210 vs. NCBI nr
Match: KAG6574771.1 (Transcription factor TCP9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 518.8 bits (1335), Expect = 3.4e-143
Identity = 286/341 (83.87%), Postives = 307/341 (90.03%), Query Frame = 0


Query: 1   MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFT 60
           MADI KQ+LDD   SPPTHL IN+SDSS ++LL L PK+EHPD+D         Q++KFT
Sbjct: 1   MADIHKQDLDDHHHSPPTHLSINNSDSSPMNLLPLAPKREHPDNDHET------QVVKFT 60

Query: 61  ADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL 120
           A+I K+VSS+PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL
Sbjct: 61  AEIPKTVSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL 120

Query: 121 LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYV 180
           LERAEPAIIAATGTGT+PAIAMSVNGTLKIPTTTSSSNQDS D SA+KKRRKRPANSDYV
Sbjct: 121 LERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRPANSDYV 180

Query: 181 DVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240
           DVNDA+SVSVSASNG VQA TVAGSPAVQQ FPPGFVPVWAIPSNAIIPGAVFMVPSV C
Sbjct: 181 DVNDAVSVSVSASNGAVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIPGAVFMVPSVDC 240

Query: 241 SSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM 300
           SSTRPQ FSFP PAAPLINTTARPIST PSK  TSHIQ++ TNQSSSTS+SSASKS+SVM
Sbjct: 241 SSTRPQFFSFPTPAAPLINTTARPISTVPSKLHTSHIQANTTNQSSSTSNSSASKSESVM 300

Query: 301 APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSK 342
           APISSSTV T+GKTT QMLR+FSLEIYDKEE QFMSRSS +
Sbjct: 301 APISSSTVTTNGKTTKQMLREFSLEIYDKEELQFMSRSSER 335

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BLAST of Clc06G00210 vs. ExPASy Swiss-Prot
Match: O64647 (Transcription factor TCP9 OS=Arabidopsis thaliana OX=3702 GN=TCP9 PE=1 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.4e-67
Identity = 165/299 (55.18%), Postives = 205/299 (68.56%), Query Frame = 0


Query: 59  FTADIAKSVSSLPP-KRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 118
           F+  +A   S+ PP KR STKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDGETI
Sbjct: 56  FSMSLAPPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETI 115

Query: 119 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANS 178
           RWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTTT++ +      +  KK+RKRP+NS
Sbjct: 116 RWLLENAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTNADS--DMGENLMKKKRKRPSNS 175

Query: 179 DYVDVNDALSVS-----VSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIP--G 238
           +Y+D++DA+S S     ++ +  +     +A S   QQ  P G  P+WAIPSNA+IP  G
Sbjct: 176 EYIDISDAVSASSGLAPIATTTTIQPPQALASSTVAQQLLPQGMYPMWAIPSNAMIPTVG 235

Query: 239 AVFMVPSVACSSTRPQLFSFPAPAAPLINTTA--RPISTFPSKPDTSHIQSSPTNQSSST 298
           A F++P +A  S +PQL +FPA AA   +  A  +  ST    P    + SS     S  
Sbjct: 236 AFFLIPQIAGPSNQPQLLAFPAAAASPSSYVAAVQQASTMARPPPLQVVPSSGFVSVSDV 295

Query: 299 SSSSASKSQSVMAPISSSTVPTSGK-----TTTQMLRDFSLEIYDKEE-RQFMSRSSSK 342
           S S+ S++ SVMAP SSS V T        TTT  LRDFSLEIY+K+E  QFMS ++++
Sbjct: 296 SGSNLSRATSVMAPSSSSGVTTGSSSSIATTTTHTLRDFSLEIYEKQELHQFMSTTTAR 352

[Close]

BLAST of Clc06G00210 vs. ExPASy Swiss-Prot
Match: Q9LT89 (Transcription factor TCP19 OS=Arabidopsis thaliana OX=3702 GN=TCP19 PE=1 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 4.6e-50
Identity = 140/301 (46.51%), Postives = 175/301 (58.14%), Query Frame = 0


Query: 44  SDDSNLPPSGIQLLKFTADIAKSVSSLP-PKRPSTKDRHTKVEGRGRRIRIPATCAARIF 103
           SD +     G+ L+K      + V + P PKRP++KDRHTKVEGRGRRIR+PA CAAR+F
Sbjct: 23  SDPNPKTKPGMMLMKQEDGYLQPVKTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAARVF 82

Query: 104 QLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQD-- 163
           QLTRELGHKSDGETIRWLLERAEPAII ATGTGT+PAIA+SVNGTLKIPT++   N    
Sbjct: 83  QLTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVSVNGTLKIPTSSPVLNDGGR 142

Query: 164 SADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVW 223
             D    KKRRKR   SD+VDVND+   SV++    + A     +  +      GFVP W
Sbjct: 143 DGDGDLIKKRRKRNCTSDFVDVNDSCHSSVTSGLAPITASNYGVN--ILNVNTQGFVPFW 202

Query: 224 AIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPA-APLINTTARPISTFPSKPDTSHIQS 283
            +       G  F+           Q+++ P  A AP +N  ARP+S++           
Sbjct: 203 PMGM-----GTAFVTGG---PDQMGQMWAIPTVATAPFLNVGARPVSSY----------- 262

Query: 284 SPTNQSSSTSSSSASKSQSVMAPISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSS 341
                      S+AS +++ M         TSG  TTQ LRDFSLEIYDK E QF+  S 
Sbjct: 263 ----------VSNASDAEAEM--------ETSGGGTTQPLRDFSLEIYDKRELQFLGGSG 284

[Close]

BLAST of Clc06G00210 vs. ExPASy Swiss-Prot
Match: A2YXQ1 (Transcription factor PCF2 OS=Oryza sativa subsp. indica OX=39946 GN=PCF2 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.4e-32
Identity = 109/258 (42.25%), Postives = 144/258 (55.81%), Query Frame = 0


Query: 71  PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIA 130
           PP  P  +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETIRWLL+++EPAIIA
Sbjct: 71  PP--PRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAIIA 130

Query: 131 ATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSA------DPSAAKKRRKRPANSDYVDVND 190
           ATGTGT+PAIA +V+G L+IPT +SSS+  ++      + S+AK+RRK          + 
Sbjct: 131 ATGTGTVPAIATTVDGVLRIPTQSSSSSGPASSAVVDGEESSAKRRRKLQPTRAVAGASP 190

Query: 191 ALSVSVSASNGVVQAGTVAGS------------PAVQQAFPPGFVPVWAIPS-------- 250
             + + +A   V+    + GS            P      P G VPV+A+P+        
Sbjct: 191 LATAAPAAYYPVIADPLLQGSGGAAISVPSGLAPITATGAPQGLVPVFAVPATGSPAVAG 250

Query: 251 -NAIIP--GAVFMVP---SVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQ 297
            N +IP   AV+MVP     A +  +P  F     A  L+N      + FP+  + +  Q
Sbjct: 251 GNRMIPQATAVWMVPQPAGAAGAGNQPTQFWAIQSAPQLVNFAG---AQFPTAINVADFQ 310

[Close]

BLAST of Clc06G00210 vs. ExPASy Swiss-Prot
Match: Q6ZBH6 (Transcription factor PCF2 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF2 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.4e-32
Identity = 109/258 (42.25%), Postives = 144/258 (55.81%), Query Frame = 0


Query: 71  PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIA 130
           PP  P  +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETIRWLL+++EPAIIA
Sbjct: 71  PP--PRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAIIA 130

Query: 131 ATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSA------DPSAAKKRRKRPANSDYVDVND 190
           ATGTGT+PAIA +V+G L+IPT +SSS+  ++      + S+AK+RRK          + 
Sbjct: 131 ATGTGTVPAIATTVDGVLRIPTQSSSSSGPASSAVVDGEESSAKRRRKLQPTRAVAGASP 190

Query: 191 ALSVSVSASNGVVQAGTVAGS------------PAVQQAFPPGFVPVWAIPS-------- 250
             + + +A   V+    + GS            P      P G VPV+A+P+        
Sbjct: 191 LATAAPAAYYPVIADPLLQGSGGAAISVPSGLAPITATGAPQGLVPVFAVPATGSPAVAG 250

Query: 251 -NAIIP--GAVFMVP---SVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQ 297
            N +IP   AV+MVP     A +  +P  F     A  L+N      + FP+  + +  Q
Sbjct: 251 GNRMIPQATAVWMVPQPAGAAGAGNQPTQFWAIQSAPQLVNFAG---AQFPTAINVADFQ 310

[Close]

BLAST of Clc06G00210 vs. ExPASy Swiss-Prot
Match: Q9C9L2 (Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.0e-28
Identity = 91/212 (42.92%), Postives = 117/212 (55.19%), Query Frame = 0


Query: 42  PDSDDSNLPPSGIQLL-KFTADIAKSVSSL-------------PPKRPSTKDRHTKVEGR 101
           PD D ++ P   +QLL   T+  + S++ +             PPKR STKDRHTKVEGR
Sbjct: 3   PDPDHNHRPNFPLQLLDSSTSSSSTSLAIISTTSEPNSEPKKPPPKRTSTKDRHTKVEGR 62

Query: 102 GRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGT 161
           GRRIR+PA CAAR+FQLTRELGHKSDGETI WLL++AEPA+IAATGTGTIPA   S+N +
Sbjct: 63  GRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNIS 122

Query: 162 LK----------IPTTTSS----SNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSAS 221
           L+          + TT SS    S   S       + + RP N  +   + +  +     
Sbjct: 123 LRSSRSSLSAAHLRTTPSSYYFHSPHQSMTHHLQHQHQVRPKNESHSSSSSSSQLLDHNQ 182

Query: 222 NGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSN 226
            G     + AGS    Q+  P   P W+   N
Sbjct: 183 MGNYLVQSTAGSLPTSQS--PATAPFWSSGDN 212

[Close]

BLAST of Clc06G00210 vs. ExPASy TrEMBL
Match: A0A1S3CBF3 (transcription factor TCP9 OS=Cucumis melo OX=3656 GN=LOC103499048 PE=4 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 2.2e-151
Identity = 306/342 (89.47%), Postives = 313/342 (91.52%), Query Frame = 0


Query: 1   MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFT 60
           MAD QKQELDDDDDSPPTHL INDSDSSR+DLL L PKQEHP   DSNLP     LL F 
Sbjct: 1   MADNQKQELDDDDDSPPTHLRINDSDSSRMDLLPLTPKQEHP---DSNLPH---DLLTFN 60

Query: 61  ADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL 120
            DI K++SSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL
Sbjct: 61  PDIPKTLSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL 120

Query: 121 LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYV 180
           LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA KKRRKRPANSDYV
Sbjct: 121 LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANSDYV 180

Query: 181 DVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240
           DVNDALSVS+SASN       VAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC
Sbjct: 181 DVNDALSVSISASN-------VAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240

Query: 241 SSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM 300
           SSTRPQLFSF APAAP+INTTARPIS FPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
Sbjct: 241 SSTRPQLFSFSAPAAPVINTTARPISAFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM 300

Query: 301 APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSKH 343
           APISSS+V  SGKTTTQMLRDFSLEIYDKEE QFM+RSSSKH
Sbjct: 301 APISSSSVQRSGKTTTQMLRDFSLEIYDKEELQFMTRSSSKH 329

[Close]

BLAST of Clc06G00210 vs. ExPASy TrEMBL
Match: A0A5A7TAM9 (Transcription factor TCP9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00250 PE=4 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 1.0e-148
Identity = 301/337 (89.32%), Postives = 308/337 (91.39%), Query Frame = 0


Query: 1   MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFT 60
           MAD QKQELDDDDDSPPTHL INDSDSSR+DLL L PKQEHP   DSNLP     LL F 
Sbjct: 1   MADNQKQELDDDDDSPPTHLRINDSDSSRMDLLPLTPKQEHP---DSNLPH---DLLTFN 60

Query: 61  ADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL 120
            DI K++SSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL
Sbjct: 61  PDIPKTLSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL 120

Query: 121 LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYV 180
           LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA KKRRKRPANSDYV
Sbjct: 121 LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANSDYV 180

Query: 181 DVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240
           DVNDALSVS+SASN       VAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC
Sbjct: 181 DVNDALSVSISASN-------VAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240

Query: 241 SSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM 300
           SSTRPQLFSF APAAP+INTTARPIS FPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
Sbjct: 241 SSTRPQLFSFSAPAAPVINTTARPISAFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM 300

Query: 301 APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSR 338
           APISSS+V  SGKTTTQMLRDFSLEIYDKEE QFM+R
Sbjct: 301 APISSSSVQRSGKTTTQMLRDFSLEIYDKEELQFMTR 324

[Close]

BLAST of Clc06G00210 vs. ExPASy TrEMBL
Match: A0A0A0KCU1 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G075180 PE=4 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 9.4e-147
Identity = 302/342 (88.30%), Postives = 307/342 (89.77%), Query Frame = 0


Query: 1   MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFT 60
           MAD QKQELDDDDDSPPTHL INDSDSSR+DLL L PKQEHP   DSNLP     LL F 
Sbjct: 1   MADNQKQELDDDDDSPPTHLRINDSDSSRMDLLPLTPKQEHP---DSNLPH---DLLTFN 60

Query: 61  ADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL 120
            DI K++SSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL
Sbjct: 61  PDIPKTLSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL 120

Query: 121 LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYV 180
           LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA KKRRKRPANSDYV
Sbjct: 121 LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANSDYV 180

Query: 181 DVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240
           DVNDALSVS+SASN       VAGS AVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC
Sbjct: 181 DVNDALSVSISASN-------VAGSSAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240

Query: 241 SSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM 300
           SSTRPQLFSF  PAAPLINTTARPIS FPSK +TSHIQSSPTNQSSSTSSSSASKSQSVM
Sbjct: 241 SSTRPQLFSFSTPAAPLINTTARPISAFPSKAETSHIQSSPTNQSSSTSSSSASKSQSVM 300

Query: 301 APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSKH 343
           APISSS    SGKTTTQMLRDFSLEIYDKEE QFMS SSSKH
Sbjct: 301 APISSS----SGKTTTQMLRDFSLEIYDKEELQFMSSSSSKH 325

[Close]

BLAST of Clc06G00210 vs. ExPASy TrEMBL
Match: A0A6J1H4Z3 (transcription factor TCP9-like OS=Cucurbita moschata OX=3662 GN=LOC111460441 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 2.0e-141
Identity = 286/347 (82.42%), Postives = 307/347 (88.47%), Query Frame = 0


Query: 1   MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFT 60
           MADI KQ+LDD   SPPTHL IN+SDSS ++LL L PK+EHPD+D         Q++KFT
Sbjct: 70  MADIHKQDLDDHHHSPPTHLSINNSDSSPMNLLPLAPKREHPDNDHET------QVVKFT 129

Query: 61  ADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL 120
           A+I K+VSS+PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL
Sbjct: 130 AEIPKTVSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL 189

Query: 121 LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYV 180
           LERAEPAIIAATGTGT+PAIAMSVNGTLKIPTTTSSSNQDS D SA+KKRRKRPANSDYV
Sbjct: 190 LERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRPANSDYV 249

Query: 181 DVNDALSVSV------SASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFM 240
           DVNDA+SVSV      SASNG VQA TVAGSPAVQQ FPPGFVPVWAIPSNAIIPGAVFM
Sbjct: 250 DVNDAVSVSVSASASASASNGCVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIPGAVFM 309

Query: 241 VPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSAS 300
           VPSV CSSTRPQ FSFP PAAPLINTTARPIST PSK  TSHIQ++ TNQSSSTS+SSAS
Sbjct: 310 VPSVDCSSTRPQFFSFPTPAAPLINTTARPISTVPSKLHTSHIQANTTNQSSSTSNSSAS 369

Query: 301 KSQSVMAPISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSK 342
           KS+SVMAPISSSTV T+GKTT QMLR+FSLEIYDKEE QFMSRSS +
Sbjct: 370 KSESVMAPISSSTVTTNGKTTKQMLREFSLEIYDKEELQFMSRSSER 410

[Close]

BLAST of Clc06G00210 vs. ExPASy TrEMBL
Match: A0A6J1L1L3 (transcription factor TCP9-like OS=Cucurbita maxima OX=3661 GN=LOC111499026 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.7e-141
Identity = 288/352 (81.82%), Postives = 308/352 (87.50%), Query Frame = 0


Query: 1   MADIQKQELDDDDD-----SPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQ 60
           MADI KQELDDD+D     SPPTHL IN+SDSS ++LL L PK+EHPD+D         Q
Sbjct: 74  MADIHKQELDDDEDDDHHHSPPTHLCINNSDSSPMNLLPLAPKREHPDNDHET------Q 133

Query: 61  LLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGE 120
           +LKFTA+I K+VSS+PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGE
Sbjct: 134 VLKFTAEIPKTVSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGE 193

Query: 121 TIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPA 180
           TIRWLLERAEPAIIAATGTGT+PAIAMSVNGTLKIPTTTSSSNQDS D SA+KKRRKRP 
Sbjct: 194 TIRWLLERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRPT 253

Query: 181 NSDYVDVNDALSVSVSAS------NGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIP 240
           NSDYVDVNDA+SVSVS S      NG VQA TVAGSPAVQQ FPPGFVPVWAIPSNAIIP
Sbjct: 254 NSDYVDVNDAVSVSVSVSASASAPNGAVQAATVAGSPAVQQPFPPGFVPVWAIPSNAIIP 313

Query: 241 GAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTS 300
           GAVFMVPSV CSSTRPQ FSFP PAAPLINTTARPIST PSK  TSHIQ++ TNQSSSTS
Sbjct: 314 GAVFMVPSVDCSSTRPQFFSFPTPAAPLINTTARPISTVPSKLHTSHIQANTTNQSSSTS 373

Query: 301 SSSASKSQSVMAPISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSK 342
           +SSASKS+SVMAPISSSTVPT+ KTT QMLR+FSLEIYDKEE QFMSRSS +
Sbjct: 374 NSSASKSESVMAPISSSTVPTNDKTTKQMLREFSLEIYDKEELQFMSRSSER 419

[Close]

BLAST of Clc06G00210 vs. TAIR 10
Match: AT2G45680.1 (TCP family transcription factor )

HSP 1 Score: 257.3 bits (656), Expect = 1.7e-68
Identity = 165/299 (55.18%), Postives = 205/299 (68.56%), Query Frame = 0


Query: 59  FTADIAKSVSSLPP-KRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 118
           F+  +A   S+ PP KR STKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDGETI
Sbjct: 56  FSMSLAPPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETI 115

Query: 119 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANS 178
           RWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTTT++ +      +  KK+RKRP+NS
Sbjct: 116 RWLLENAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTNADS--DMGENLMKKKRKRPSNS 175

Query: 179 DYVDVNDALSVS-----VSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIP--G 238
           +Y+D++DA+S S     ++ +  +     +A S   QQ  P G  P+WAIPSNA+IP  G
Sbjct: 176 EYIDISDAVSASSGLAPIATTTTIQPPQALASSTVAQQLLPQGMYPMWAIPSNAMIPTVG 235

Query: 239 AVFMVPSVACSSTRPQLFSFPAPAAPLINTTA--RPISTFPSKPDTSHIQSSPTNQSSST 298
           A F++P +A  S +PQL +FPA AA   +  A  +  ST    P    + SS     S  
Sbjct: 236 AFFLIPQIAGPSNQPQLLAFPAAAASPSSYVAAVQQASTMARPPPLQVVPSSGFVSVSDV 295

Query: 299 SSSSASKSQSVMAPISSSTVPTSGK-----TTTQMLRDFSLEIYDKEE-RQFMSRSSSK 342
           S S+ S++ SVMAP SSS V T        TTT  LRDFSLEIY+K+E  QFMS ++++
Sbjct: 296 SGSNLSRATSVMAPSSSSGVTTGSSSSIATTTTHTLRDFSLEIYEKQELHQFMSTTTAR 352

[Close]

BLAST of Clc06G00210 vs. TAIR 10
Match: AT5G51910.1 (TCP family transcription factor )

HSP 1 Score: 199.9 bits (507), Expect = 3.3e-51
Identity = 140/301 (46.51%), Postives = 175/301 (58.14%), Query Frame = 0


Query: 44  SDDSNLPPSGIQLLKFTADIAKSVSSLP-PKRPSTKDRHTKVEGRGRRIRIPATCAARIF 103
           SD +     G+ L+K      + V + P PKRP++KDRHTKVEGRGRRIR+PA CAAR+F
Sbjct: 23  SDPNPKTKPGMMLMKQEDGYLQPVKTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAARVF 82

Query: 104 QLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQD-- 163
           QLTRELGHKSDGETIRWLLERAEPAII ATGTGT+PAIA+SVNGTLKIPT++   N    
Sbjct: 83  QLTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVSVNGTLKIPTSSPVLNDGGR 142

Query: 164 SADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVW 223
             D    KKRRKR   SD+VDVND+   SV++    + A     +  +      GFVP W
Sbjct: 143 DGDGDLIKKRRKRNCTSDFVDVNDSCHSSVTSGLAPITASNYGVN--ILNVNTQGFVPFW 202

Query: 224 AIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPA-APLINTTARPISTFPSKPDTSHIQS 283
            +       G  F+           Q+++ P  A AP +N  ARP+S++           
Sbjct: 203 PMGM-----GTAFVTGG---PDQMGQMWAIPTVATAPFLNVGARPVSSY----------- 262

Query: 284 SPTNQSSSTSSSSASKSQSVMAPISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSS 341
                      S+AS +++ M         TSG  TTQ LRDFSLEIYDK E QF+  S 
Sbjct: 263 ----------VSNASDAEAEM--------ETSGGGTTQPLRDFSLEIYDKRELQFLGGSG 284

[Close]

BLAST of Clc06G00210 vs. TAIR 10
Match: AT5G51910.2 (TCP family transcription factor )

HSP 1 Score: 199.9 bits (507), Expect = 3.3e-51
Identity = 140/301 (46.51%), Postives = 175/301 (58.14%), Query Frame = 0


Query: 44  SDDSNLPPSGIQLLKFTADIAKSVSSLP-PKRPSTKDRHTKVEGRGRRIRIPATCAARIF 103
           SD +     G+ L+K      + V + P PKRP++KDRHTKVEGRGRRIR+PA CAAR+F
Sbjct: 23  SDPNPKTKPGMMLMKQEDGYLQPVKTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAARVF 82

Query: 104 QLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQD-- 163
           QLTRELGHKSDGETIRWLLERAEPAII ATGTGT+PAIA+SVNGTLKIPT++   N    
Sbjct: 83  QLTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVSVNGTLKIPTSSPVLNDGGR 142

Query: 164 SADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVW 223
             D    KKRRKR   SD+VDVND+   SV++    + A     +  +      GFVP W
Sbjct: 143 DGDGDLIKKRRKRNCTSDFVDVNDSCHSSVTSGLAPITASNYGVN--ILNVNTQGFVPFW 202

Query: 224 AIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPA-APLINTTARPISTFPSKPDTSHIQS 283
            +       G  F+           Q+++ P  A AP +N  ARP+S++           
Sbjct: 203 PMGM-----GTAFVTGG---PDQMGQMWAIPTVATAPFLNVGARPVSSY----------- 262

Query: 284 SPTNQSSSTSSSSASKSQSVMAPISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSS 341
                      S+AS +++ M         TSG  TTQ LRDFSLEIYDK E QF+  S 
Sbjct: 263 ----------VSNASDAEAEM--------ETSGGGTTQPLRDFSLEIYDKRELQFLGGSG 284

[Close]

BLAST of Clc06G00210 vs. TAIR 10
Match: AT1G69690.1 (TCP family transcription factor )

HSP 1 Score: 129.0 bits (323), Expect = 7.1e-30
Identity = 91/212 (42.92%), Postives = 117/212 (55.19%), Query Frame = 0


Query: 42  PDSDDSNLPPSGIQLL-KFTADIAKSVSSL-------------PPKRPSTKDRHTKVEGR 101
           PD D ++ P   +QLL   T+  + S++ +             PPKR STKDRHTKVEGR
Sbjct: 3   PDPDHNHRPNFPLQLLDSSTSSSSTSLAIISTTSEPNSEPKKPPPKRTSTKDRHTKVEGR 62

Query: 102 GRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGT 161
           GRRIR+PA CAAR+FQLTRELGHKSDGETI WLL++AEPA+IAATGTGTIPA   S+N +
Sbjct: 63  GRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNIS 122

Query: 162 LK----------IPTTTSS----SNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSAS 221
           L+          + TT SS    S   S       + + RP N  +   + +  +     
Sbjct: 123 LRSSRSSLSAAHLRTTPSSYYFHSPHQSMTHHLQHQHQVRPKNESHSSSSSSSQLLDHNQ 182

Query: 222 NGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSN 226
            G     + AGS    Q+  P   P W+   N
Sbjct: 183 MGNYLVQSTAGSLPTSQS--PATAPFWSSGDN 212

[Close]

BLAST of Clc06G00210 vs. TAIR 10
Match: AT3G27010.1 (TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 )

HSP 1 Score: 126.7 bits (317), Expect = 3.5e-29
Identity = 61/80 (76.25%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 64  AKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLER 123
           +++ + L PKR S KDRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETI+WLL++
Sbjct: 65  SQNQNQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ 124

Query: 124 AEPAIIAATGTGTIPAIAMS 144
           AEP+IIAATG+GTIPA A++
Sbjct: 125 AEPSIIAATGSGTIPASALA 144

The following BLAST results are available for this feature:

BLAST of Clc06G00210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876433.1	7.4e-162	92.69	transcription factor TCP9 [Benincasa hispida]	[more]
XP_008460149.1	4.5e-151	89.47	PREDICTED: transcription factor TCP9 [Cucumis melo]	[more]
KAA0040018.1	2.1e-148	89.32	transcription factor TCP9 [Cucumis melo var. makuwa] >TYK24483.1 transcription f...	[more]
XP_004145050.1	1.9e-146	88.30	transcription factor TCP9 [Cucumis sativus] >KGN46217.1 hypothetical protein Csa...	[more]
KAG6574771.1	3.4e-143	83.87	Transcription factor TCP9, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Clc06G00210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64647	2.4e-67	55.18	Transcription factor TCP9 OS=Arabidopsis thaliana OX=3702 GN=TCP9 PE=1 SV=1	[more]
Q9LT89	4.6e-50	46.51	Transcription factor TCP19 OS=Arabidopsis thaliana OX=3702 GN=TCP19 PE=1 SV=1	[more]
A2YXQ1	7.4e-32	42.25	Transcription factor PCF2 OS=Oryza sativa subsp. indica OX=39946 GN=PCF2 PE=4 SV...	[more]
Q6ZBH6	7.4e-32	42.25	Transcription factor PCF2 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF2 PE=1 ...	[more]
Q9C9L2	1.0e-28	42.92	Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1	[more]

BLAST of Clc06G00210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CBF3	2.2e-151	89.47	transcription factor TCP9 OS=Cucumis melo OX=3656 GN=LOC103499048 PE=4 SV=1	[more]
A0A5A7TAM9	1.0e-148	89.32	Transcription factor TCP9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0KCU1	9.4e-147	88.30	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G075180 PE=4 SV...	[more]
A0A6J1H4Z3	2.0e-141	82.42	transcription factor TCP9-like OS=Cucurbita moschata OX=3662 GN=LOC111460441 PE=...	[more]
A0A6J1L1L3	2.7e-141	81.82	transcription factor TCP9-like OS=Cucurbita maxima OX=3661 GN=LOC111499026 PE=4 ...	[more]

BLAST of Clc06G00210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45680.1	1.7e-68	55.18	TCP family transcription factor	[more]
AT5G51910.1	3.3e-51	46.51	TCP family transcription factor	[more]
AT5G51910.2	3.3e-51	46.51	TCP family transcription factor	[more]
AT1G69690.1	7.1e-30	42.92	TCP family transcription factor	[more]
AT3G27010.1	3.5e-29	76.25	TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 76..169 e-value: 6.4E-30 score: 104.8
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 77..131 score: 26.203869
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..315
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	PANTHER	PTHR31072:SF83	TRANSCRIPTION FACTOR TCP9	coord: 28..340
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 28..340

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G00210.1	Clc06G00210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900056	negative regulation of leaf senescence
biological_process	GO:0008361	regulation of cell size
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0048364	root development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding