Clc03G18490 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G18490
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Glycoprotein membrane precursor GPI-anchored
Location	ClcChr03: 30825460 .. 30827565 (-)
RNA-Seq Expression	Clc03G18490
Synteny	Clc03G18490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATTTATTTTTTTTTGTGCGCTTCTTCTCCTCTTTTTATTGCTTTGGGTTGGGAGTTTGATTTGTTCATTGTTACCCACAAAATTGATGGCATCTCTCTTTAGATTGTTCACTCTATTCTTCTTTGTTGTGATCTCCAACTTCCTCCTTCTACCCAATGCTGTTCTTTGTGATGGTATTTTCTCTCATGAAAATTTTAAACAATTTATGTTGATTCTTTTCTTTTCGATGTTTGTCGATACATTCTTTACGTCAAAATTTTCATTTATTTAGTTTGAAAAATTGATTTTGATGTGTATTTTAGTATGATTGTGTTAAATCACTTCTAAACATAAAACTCATATTCTTTAATACTTTGATCTCACCTCAATTTGTTAATTGTGAAACTTTAAAAAATATATATTATATGGATTCGACTTCACGACTTCTTGTTTTGATGTTTCATTATGTCATTCGATAGCTTAAAAGATAAATTTGTAGTAAAATTTTATTATTTTTTTTTCATTTATTTAGAATTGGTACTTGCTTATAACTAATGGCTTTTCTTCTTTTTCTTTGTTTTCGTTCATAACACAGTCACATGGTATATATGTTATCGATATTTCCGTTAACATCTCTTTATTCAAAGATTTAGTTTCTATTATTTCTTTTCAATTCTCTTGTCCATTAATATCTTCTTTTATTTGTGTTTACATCTATTCACATTTTTTTAGTTTAAACATTTAGAGTTAGAATCCAACCATGAACCTTGGAGATAGTAATTTTAGTAGTTTTATCAATTGAACTATGCTCGAATTGACAGTTAAAATTAAATATCCACTTACGATCATATATTTTTTTTATTCTTTTGTCAATCATATGGATATTAAATATCCACTTACGATCATATTTTTTTTTATTCTTTTGTCAATCATATGGATATGCCATGTTATCAATATATTTTCATCAACATTCGACATCTGCATTTATAATCGAGAGTGTTGAAGTATGAATAAAAGATCAAGATCTCAATTGATAACTATTTCATTGTTTTGTTTTTTGTTTTCAAAAATCAAGTCTCTTCCCTCTCAATTTCCTACAATGATATGTATTTTTCTTAAGTAGCCGAATTTCAAAAACAAAAATAAATTTCTAAAAACTATTTTTTTAAAGTTAAATGTTCTAAATTTGACTTGGTTCTTGAAAAACACATTCATAAAAAATAAATTATAAATAAAAAAATAAAAAACTAAATGATTACTAAATCCAACGTGACTAATATACACTTTGTTTCTCGTAGCTTTTTCTTCTTTTGTTATTATATCCCTTGGTATCGACGTTTTCTTTCTTTGCAACCAACGATATAACATAACCAATGTGCTAACACGACATAGCTTCTTTTGTTGTACAGTGAAAGATGAAGATATTCTAAAGGCCATCAACAAATACAGGCAATCAAAGAATCTATCTGAGTTTTCTTATAACAAAAATGCAGCTTGTTTGGCTAGTAGACTTGTTTATAAGCTAAGAGATGAGCCTTGTTCAAGTGCAGATAATTTCAACAAAGAAATCAGCTCCGAAAGTAAGCTTGCAGATTACCCTAAGCTCTTGAAAAAATGTCACATAGCCTATGACTCCTCTGTTGATGGCATCATTCTTCCCGCTTGCATCCCCGAGCTCGACCCCGTGTCCGTTGCCAGTAACTACACTAAGTCCCATGACGTCGAGTACATCAATGACCGTAACTATACCGGTGCTGGGGTCGGGACGTTCGACAATTGGGTCGTCCTTGTTCTTAGCACTAACACATCGACCGGGAACTATGCGAGTGGTGGATCGTCGTCTTTGGTTGTTGCTGGGGGTGGCCACATTGGTGTGATTGTTGCATTCTTAGGGATGTTTGTTTTAGCTTTGTTATTTTGATTATCTTTTTCTTTCTTGGTTGAGCTTTTAAGGCCTTTTTTTTGGGTTTTATATGCAATCTGATTTGTTCTTTTTATGAGCATGCATATGAAATGTCTATATATTTGTTCTTTCAGCTAATTATATAATCAAACTTTGGACAAAACCACTCCTAAACTTTAGTGATTACTGTTGATGGGAAATCATAATAATTTGGATAAGTA

mRNA sequence

TTTATTTATTTTTTTTTGTGCGCTTCTTCTCCTCTTTTTATTGCTTTGGGTTGGGAGTTTGATTTGTTCATTGTTACCCACAAAATTGATGGCATCTCTCTTTAGATTGTTCACTCTATTCTTCTTTGTTGTGATCTCCAACTTCCTCCTTCTACCCAATGCTGTTCTTTGTGATGTGAAAGATGAAGATATTCTAAAGGCCATCAACAAATACAGGCAATCAAAGAATCTATCTGAGTTTTCTTATAACAAAAATGCAGCTTGTTTGGCTAGTAGACTTGTTTATAAGCTAAGAGATGAGCCTTGTTCAAGTGCAGATAATTTCAACAAAGAAATCAGCTCCGAAAGTAAGCTTGCAGATTACCCTAAGCTCTTGAAAAAATGTCACATAGCCTATGACTCCTCTGTTGATGGCATCATTCTTCCCGCTTGCATCCCCGAGCTCGACCCCGTGTCCGTTGCCAGTAACTACACTAAGTCCCATGACGTCGAGTACATCAATGACCGTAACTATACCGGTGCTGGGGTCGGGACGTTCGACAATTGGGTCGTCCTTGTTCTTAGCACTAACACATCGACCGGGAACTATGCGAGTGGTGGATCGTCGTCTTTGGTTGTTGCTGGGGGTGGCCACATTGGTGTGATTGTTGCATTCTTAGGGATGTTTGTTTTAGCTTTGTTATTTTGATTATCTTTTTCTTTCTTGGTTGAGCTTTTAAGGCCTTTTTTTTGGGTTTTATATGCAATCTGATTTGTTCTTTTTATGAGCATGCATATGAAATGTCTATATATTTGTTCTTTCAGCTAATTATATAATCAAACTTTGGACAAAACCACTCCTAAACTTTAGTGATTACTGTTGATGGGAAATCATAATAATTTGGATAAGTA

Coding sequence (CDS)

ATGGCATCTCTCTTTAGATTGTTCACTCTATTCTTCTTTGTTGTGATCTCCAACTTCCTCCTTCTACCCAATGCTGTTCTTTGTGATGTGAAAGATGAAGATATTCTAAAGGCCATCAACAAATACAGGCAATCAAAGAATCTATCTGAGTTTTCTTATAACAAAAATGCAGCTTGTTTGGCTAGTAGACTTGTTTATAAGCTAAGAGATGAGCCTTGTTCAAGTGCAGATAATTTCAACAAAGAAATCAGCTCCGAAAGTAAGCTTGCAGATTACCCTAAGCTCTTGAAAAAATGTCACATAGCCTATGACTCCTCTGTTGATGGCATCATTCTTCCCGCTTGCATCCCCGAGCTCGACCCCGTGTCCGTTGCCAGTAACTACACTAAGTCCCATGACGTCGAGTACATCAATGACCGTAACTATACCGGTGCTGGGGTCGGGACGTTCGACAATTGGGTCGTCCTTGTTCTTAGCACTAACACATCGACCGGGAACTATGCGAGTGGTGGATCGTCGTCTTTGGTTGTTGCTGGGGGTGGCCACATTGGTGTGATTGTTGCATTCTTAGGGATGTTTGTTTTAGCTTTGTTATTTTGA

Protein sequence

MASLFRLFTLFFFVVISNFLLLPNAVLCDVKDEDILKAINKYRQSKNLSEFSYNKNAACLASRLVYKLRDEPCSSADNFNKEISSESKLADYPKLLKKCHIAYDSSVDGIILPACIPELDPVSVASNYTKSHDVEYINDRNYTGAGVGTFDNWVVLVLSTNTSTGNYASGGSSSLVVAGGGHIGVIVAFLGMFVLALLF

Homology

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BLAST of Clc03G18490 vs. NCBI nr
Match: XP_038879946.1 (uncharacterized GPI-anchored protein At3g06035-like [Benincasa hispida])

HSP 1 Score: 322.4 bits (825), Expect = 2.7e-84
Identity = 167/200 (83.50%), Postives = 184/200 (92.00%), Query Frame = 0


Query: 1   MASLFRLFTLFFFVVISNFLLLPNAVLCDVKDEDILKAINKYRQSKNLSEFSYNKNAACL 60
           MASLFRLFTLFFFVVISNFLLLPN VLCDVKD++IL+AIN+YR SKNLS  S N+NAACL
Sbjct: 1   MASLFRLFTLFFFVVISNFLLLPNVVLCDVKDDNILEAINQYRLSKNLSSLSSNRNAACL 60

Query: 61  ASRLVYKLRDEPCSSADNFNKEISSESKLADYPKLLKKCHIAYDSSVDGIILPACIPELD 120
           ASRL YKLRDEPCSSA+NFNKEISSE+KLAD+PKLLKKCHIAY+SSVDGIILPAC+P+L+
Sbjct: 61  ASRLAYKLRDEPCSSAENFNKEISSEAKLADFPKLLKKCHIAYNSSVDGIILPACVPKLE 120

Query: 121 PVSVASNYTKSHDVEYINDRNYTGAGVGTFD-NWVVLVLSTNTSTGNYASGGSSSLVVAG 180
           P  V SNY+ SHDVEYIND NYTGAGVGTFD NWVV+VLSTNTSTG+YASGGS+SLVV G
Sbjct: 121 PAFVISNYSNSHDVEYINDGNYTGAGVGTFDNNWVVVVLSTNTSTGDYASGGSTSLVVVG 180

Query: 181 GGHIGVIVAFLGMFVLALLF 200
           GG IGV+VA LGMFV ALLF
Sbjct: 181 GGRIGVMVALLGMFVSALLF 200

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BLAST of Clc03G18490 vs. NCBI nr
Match: XP_008450653.1 (PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo] >TYK10235.1 putative GPI-anchored protein [Cucumis melo var. makuwa])

HSP 1 Score: 319.3 bits (817), Expect = 2.3e-83
Identity = 164/198 (82.83%), Postives = 180/198 (90.91%), Query Frame = 0


Query: 3   SLFRLFTLFFFVVISNFLLLPNAVLCDVKDEDILKAINKYRQSKNLSEFSYNKNAACLAS 62
           SLFRLFTLFFFVVIS FLL PN VLCDVKD++IL AINKYRQSKNLSEFSYNKNAACLA 
Sbjct: 4   SLFRLFTLFFFVVISIFLLHPNVVLCDVKDDNILSAINKYRQSKNLSEFSYNKNAACLAG 63

Query: 63  RLVYKLRDEPCSSADNFNKEISSESKLADYPKLLKKCHIAYDSSVDGIILPACIPELDPV 122
           +LVYKLRDEPCSSA+NFNKEISSE+KLAD+PKLL+KCHIAY+SS+DGIILP+C+P LDP 
Sbjct: 64  KLVYKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSIDGIILPSCVPGLDPT 123

Query: 123 SVASNYTKSHDVEYINDRNYTGAGVGTF-DNWVVLVLSTNTSTGNYASGGSSSLVVAGGG 182
           SV SNYT SHD EYIND+NYTGAGVGT  D WVVL+LSTNTSTGNY S GSSSLVVAGGG
Sbjct: 124 SVTSNYTHSHDAEYINDQNYTGAGVGTIEDAWVVLILSTNTSTGNYDSSGSSSLVVAGGG 183

Query: 183 HIGVIVAFLGMFVLALLF 200
            +GV+VA LGMFV +LLF
Sbjct: 184 RVGVMVALLGMFVSSLLF 201

[Close]

BLAST of Clc03G18490 vs. NCBI nr
Match: KAA0050883.1 (putative GPI-anchored protein [Cucumis melo var. makuwa])

HSP 1 Score: 318.2 bits (814), Expect = 5.2e-83
Identity = 163/198 (82.32%), Postives = 180/198 (90.91%), Query Frame = 0


Query: 3   SLFRLFTLFFFVVISNFLLLPNAVLCDVKDEDILKAINKYRQSKNLSEFSYNKNAACLAS 62
           SLFRLFTLFFFVVIS FLL PN VLCDVKD++IL AINKYRQSKNLSEFSYNKNAACLA 
Sbjct: 4   SLFRLFTLFFFVVISIFLLHPNVVLCDVKDDNILSAINKYRQSKNLSEFSYNKNAACLAG 63

Query: 63  RLVYKLRDEPCSSADNFNKEISSESKLADYPKLLKKCHIAYDSSVDGIILPACIPELDPV 122
           +LVYKLRDEPCSSA+NFNKEISSE+KLAD+PKLL+KCHIAY++S+DGIILP+C+P LDP 
Sbjct: 64  KLVYKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNTSIDGIILPSCVPGLDPT 123

Query: 123 SVASNYTKSHDVEYINDRNYTGAGVGTF-DNWVVLVLSTNTSTGNYASGGSSSLVVAGGG 182
           SV SNYT SHD EYIND+NYTGAGVGT  D WVVL+LSTNTSTGNY S GSSSLVVAGGG
Sbjct: 124 SVTSNYTHSHDAEYINDQNYTGAGVGTIEDAWVVLILSTNTSTGNYDSSGSSSLVVAGGG 183

Query: 183 HIGVIVAFLGMFVLALLF 200
            +GV+VA LGMFV +LLF
Sbjct: 184 RVGVMVALLGMFVSSLLF 201

[Close]

BLAST of Clc03G18490 vs. NCBI nr
Match: XP_004135621.1 (uncharacterized GPI-anchored protein At5g19250 [Cucumis sativus] >KAE8653371.1 hypothetical protein Csa_007256 [Cucumis sativus])

HSP 1 Score: 308.5 bits (789), Expect = 4.1e-80
Identity = 158/198 (79.80%), Postives = 180/198 (90.91%), Query Frame = 0


Query: 3   SLFRLFTLFFFVVISNFLLLPNAVLCDVKDEDILKAINKYRQSKNLSEFSYNKNAACLAS 62
           SLFRLFTLFFFV+IS FLL PN VLCDVKD++IL AIN+YR+SKNLS  SYN+NAACLA 
Sbjct: 4   SLFRLFTLFFFVLISIFLLHPNVVLCDVKDDNILNAINEYRESKNLSRLSYNRNAACLAG 63

Query: 63  RLVYKLRDEPCSSADNFNKEISSESKLADYPKLLKKCHIAYDSSVDGIILPACIPELDPV 122
           +LVYKLRDEPCSSA+NFNKEISSE+KLAD+PKLL+KCHIAY+SSVDGIILP+C+  LD +
Sbjct: 64  KLVYKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGLDAI 123

Query: 123 SVASNYTKSHDVEYINDRNYTGAGVGTFDN-WVVLVLSTNTSTGNYASGGSSSLVVAGGG 182
           SV SNYT+SHD EYIND+NYTGAGVGT D+ WVVL+LSTNTSTGNY + GSSSLVVAGGG
Sbjct: 124 SVTSNYTRSHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYDNSGSSSLVVAGGG 183

Query: 183 HIGVIVAFLGMFVLALLF 200
           HIGV+VA LGMFV +LLF
Sbjct: 184 HIGVMVALLGMFVSSLLF 201

[Close]

BLAST of Clc03G18490 vs. NCBI nr
Match: KAG7023953.1 (putative GPI-anchored protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 292.4 bits (747), Expect = 3.0e-75
Identity = 146/192 (76.04%), Postives = 171/192 (89.06%), Query Frame = 0


Query: 6   RLFTLFFFVVISNFLLLPNAVLCDVKDEDILKAINKYRQSKNLSEFSYNKNAACLASRLV 65
           R+F LFFF VI+ FLLLPNAVLCDVKD +IL AIN YRQSK+LS  ++NKNAACLASR V
Sbjct: 2   RVFALFFFAVIATFLLLPNAVLCDVKDTEILNAINNYRQSKHLSNLTHNKNAACLASRFV 61

Query: 66  YKLRDEPCSSADNFNKEISSESKLADYPKLLKKCHIAYDSSVDGIILPACIPELDPVSVA 125
           YKLRDEPCSS D+F+KEI+SE+ LAD+ KLLKKCHIAY+S+VDGI+LPAC+P LDP SVA
Sbjct: 62  YKLRDEPCSSPDDFHKEINSENTLADFLKLLKKCHIAYNSTVDGIMLPACVPHLDPKSVA 121

Query: 126 SNYTKSHDVEYINDRNYTGAGVGTFDNWVVLVLSTNTSTGNYASGGSSSLVVAGGGHIGV 185
            NYTKSHDV+YIN +N+TGAGVGT D+W+VLVLSTNTSTGN+A+GGSSSLVVA GG IG+
Sbjct: 122 DNYTKSHDVDYINSKNFTGAGVGTSDDWIVLVLSTNTSTGNFANGGSSSLVVARGGCIGI 181

Query: 186 IVAFLGMFVLAL 198
           +V FLG+FVL L
Sbjct: 182 MVGFLGLFVLLL 193

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BLAST of Clc03G18490 vs. ExPASy Swiss-Prot
Match: Q84MC0 (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 GN=At3g06035 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.6e-26
Identity = 67/180 (37.22%), Postives = 106/180 (58.89%), Query Frame = 0


Query: 16  ISNFLLLPNAVLCDVKDEDI-LKAINKYRQSKNLSEFSYNKNAACLASRLVYKLRDEPCS 75
           +S  L L   VL D  +EDI L  IN YR ++NL+  S N+NA CLA  +  + +++PC+
Sbjct: 12  LSILLCLNRPVLSDTDEEDILLTGINSYRTTQNLTILSKNENAECLADEIADQFKNKPCT 71

Query: 76  SADNFNKEISSESKLADYPKLLKKCHIAYDSSVDGIILPACIPELDPVSVASNYTKSHDV 135
           +         +E + A+YP++L KCH+    + DG I+PAC+P L+   V +N+TKS   
Sbjct: 72  NDTGSATVPGTEPQFANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKSQYS 131

Query: 136 EYINDRNYTGAGVGTFDNWVVLVLSTNTSTGNYASG----GSSSLVVAGGGHIGVIVAFL 191
             +ND  +TG G+G  D+W+V+VL+TNT  G+Y++       S+    G G +  +V F+
Sbjct: 132 MSLNDSKFTGIGIGKEDDWIVVVLTTNTPEGSYSTATPTKQESNGFTFGIGLVSYLVIFM 191

[Close]

BLAST of Clc03G18490 vs. ExPASy Swiss-Prot
Match: P59833 (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 GN=At5g19250 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-24
Identity = 69/192 (35.94%), Postives = 105/192 (54.69%), Query Frame = 0


Query: 10  LFFFVVISNFLLLPNAVLCDVKDED--ILKAINKYRQSKNLSEFSYNKNAACLASRLVYK 69
           L    ++S FL L   VL D  DE+  +L  IN YR S NL+   +N NA CLA  +  +
Sbjct: 6   LHLLFLLSVFLSLHPLVLSDTADEEDVLLTGINSYRASLNLTTLIHNHNAECLADEIADQ 65

Query: 70  LRDEPCSSADNFNKEISSESKLADYPKLLKKCHIAYDSSVDGIILPACIPELDPVSVASN 129
            +++PC++         +     + P LL KC +    + DG ILPAC+P LDP  V +N
Sbjct: 66  FKNQPCTNTTGSASVPGTTPGFPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLTN 125

Query: 130 YTKSHDVEYINDRNYTGAGVGTFDNWVVLVLSTNTSTGNYASGGSSSLVVAGGGHIGVIV 189
           +T S   + +ND  +TG G+G+ DNW+V+VL+T+T  G+Y+   +S     G   +  +V
Sbjct: 126 FTMSQYSKDLNDSKFTGIGIGSDDNWIVVVLTTSTPEGSYSPASNSGAFAFG---VNGLV 185

Query: 190 AFLGMFVLALLF 200
           +   MF+L   F
Sbjct: 186 SSSLMFLLFCFF 194

[Close]

BLAST of Clc03G18490 vs. ExPASy Swiss-Prot
Match: Q84VZ5 (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 GN=At5g19240 PE=2 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 4.2e-19
Identity = 61/172 (35.47%), Postives = 99/172 (57.56%), Query Frame = 0


Query: 15  VISNFLLLPNAVLCDVKDEDILKAI-NKYRQSKNLSEFSYNKNAACLASRLVYKLRDEPC 74
           ++S FL L   VL +   E++L  + N+YR+S NL+    NKNA CLA  +V +L+++PC
Sbjct: 12  LLSVFLSLHRPVLSNTDGENLLFTVFNQYRESVNLTNLKKNKNAECLADEVVDQLQNQPC 71

Query: 75  SSADNFNKEISSESKLADYPKLLKKCHIAYDSSVDGIILPACIPE----LDPVSVASNYT 134
           ++         ++  + ++P LL KC +  + + DG+IL  C P+     D  S A+  T
Sbjct: 72  TNTTGSASVPGTDPGIPNFPNLLAKCRLNTNVTRDGLILQVCAPKHHSTPDLSSFANVLT 131

Query: 135 KSHDVEYINDRNYTGAGVGTFDN--WVVLVLSTNTSTGNYASGGSSSLVVAG 180
           K+     +ND  +TGAGVG   +  W+V VL+TNT  G+Y++ G+ +  V G
Sbjct: 132 KN-----LNDSKFTGAGVGIDSDGIWLVTVLTTNTPGGSYSNSGAFAFGVNG 178

[Close]

BLAST of Clc03G18490 vs. ExPASy Swiss-Prot
Match: Q8GUL8 (Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana OX=3702 GN=At5g19230 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.1e-16
Identity = 57/161 (35.40%), Postives = 86/161 (53.42%), Query Frame = 0


Query: 10  LFFFVVISNFLLLPNAVL--CDVKDEDILKAINKYRQSKNLSEFSYNKNAACLASRLVYK 69
           L    ++S FL L   VL   D +D+ +L   NKYR   NL   + N+NA CLA  +V +
Sbjct: 6   LHLLCLLSVFLSLHRLVLSGTDGEDDLLLTVFNKYRTGLNLKTLTKNENAECLADEVVDQ 65

Query: 70  LRDEPCSSADNFNKEISSESKLADYPKLLKKCHIAYDSSVDGIILPACIPELDPVSVASN 129
           L+++PC++ +N        S       LL KC +      DG+I+  C P+ D     SN
Sbjct: 66  LKNQPCTNTNN--------SAPVPGNNLLAKCSLNTTVVRDGVIMQVCFPKHDKNPDLSN 125

Query: 130 YTKSHDVEYINDRNYTGAGVGTFDNWVVLVLSTNTSTGNYA 169
           +  S  ++ +ND   TG G+G+ D WVV++L+TNT  G Y+
Sbjct: 126 F-NSVVLKNLNDSKITGIGIGSGDIWVVVILTTNTPEGGYS 157

[Close]

BLAST of Clc03G18490 vs. ExPASy TrEMBL
Match: A0A5D3CFH2 (Putative GPI-anchored protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003820 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 164/198 (82.83%), Postives = 180/198 (90.91%), Query Frame = 0


Query: 3   SLFRLFTLFFFVVISNFLLLPNAVLCDVKDEDILKAINKYRQSKNLSEFSYNKNAACLAS 62
           SLFRLFTLFFFVVIS FLL PN VLCDVKD++IL AINKYRQSKNLSEFSYNKNAACLA 
Sbjct: 4   SLFRLFTLFFFVVISIFLLHPNVVLCDVKDDNILSAINKYRQSKNLSEFSYNKNAACLAG 63

Query: 63  RLVYKLRDEPCSSADNFNKEISSESKLADYPKLLKKCHIAYDSSVDGIILPACIPELDPV 122
           +LVYKLRDEPCSSA+NFNKEISSE+KLAD+PKLL+KCHIAY+SS+DGIILP+C+P LDP 
Sbjct: 64  KLVYKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSIDGIILPSCVPGLDPT 123

Query: 123 SVASNYTKSHDVEYINDRNYTGAGVGTF-DNWVVLVLSTNTSTGNYASGGSSSLVVAGGG 182
           SV SNYT SHD EYIND+NYTGAGVGT  D WVVL+LSTNTSTGNY S GSSSLVVAGGG
Sbjct: 124 SVTSNYTHSHDAEYINDQNYTGAGVGTIEDAWVVLILSTNTSTGNYDSSGSSSLVVAGGG 183

Query: 183 HIGVIVAFLGMFVLALLF 200
            +GV+VA LGMFV +LLF
Sbjct: 184 RVGVMVALLGMFVSSLLF 201

[Close]

BLAST of Clc03G18490 vs. ExPASy TrEMBL
Match: A0A1S3BQD0 (uncharacterized GPI-anchored protein At5g19250-like OS=Cucumis melo OX=3656 GN=LOC103492177 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 164/198 (82.83%), Postives = 180/198 (90.91%), Query Frame = 0


Query: 3   SLFRLFTLFFFVVISNFLLLPNAVLCDVKDEDILKAINKYRQSKNLSEFSYNKNAACLAS 62
           SLFRLFTLFFFVVIS FLL PN VLCDVKD++IL AINKYRQSKNLSEFSYNKNAACLA 
Sbjct: 4   SLFRLFTLFFFVVISIFLLHPNVVLCDVKDDNILSAINKYRQSKNLSEFSYNKNAACLAG 63

Query: 63  RLVYKLRDEPCSSADNFNKEISSESKLADYPKLLKKCHIAYDSSVDGIILPACIPELDPV 122
           +LVYKLRDEPCSSA+NFNKEISSE+KLAD+PKLL+KCHIAY+SS+DGIILP+C+P LDP 
Sbjct: 64  KLVYKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSIDGIILPSCVPGLDPT 123

Query: 123 SVASNYTKSHDVEYINDRNYTGAGVGTF-DNWVVLVLSTNTSTGNYASGGSSSLVVAGGG 182
           SV SNYT SHD EYIND+NYTGAGVGT  D WVVL+LSTNTSTGNY S GSSSLVVAGGG
Sbjct: 124 SVTSNYTHSHDAEYINDQNYTGAGVGTIEDAWVVLILSTNTSTGNYDSSGSSSLVVAGGG 183

Query: 183 HIGVIVAFLGMFVLALLF 200
            +GV+VA LGMFV +LLF
Sbjct: 184 RVGVMVALLGMFVSSLLF 201

[Close]

BLAST of Clc03G18490 vs. ExPASy TrEMBL
Match: A0A5A7U4V6 (Putative GPI-anchored protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold761G00080 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.5e-83
Identity = 163/198 (82.32%), Postives = 180/198 (90.91%), Query Frame = 0


Query: 3   SLFRLFTLFFFVVISNFLLLPNAVLCDVKDEDILKAINKYRQSKNLSEFSYNKNAACLAS 62
           SLFRLFTLFFFVVIS FLL PN VLCDVKD++IL AINKYRQSKNLSEFSYNKNAACLA 
Sbjct: 4   SLFRLFTLFFFVVISIFLLHPNVVLCDVKDDNILSAINKYRQSKNLSEFSYNKNAACLAG 63

Query: 63  RLVYKLRDEPCSSADNFNKEISSESKLADYPKLLKKCHIAYDSSVDGIILPACIPELDPV 122
           +LVYKLRDEPCSSA+NFNKEISSE+KLAD+PKLL+KCHIAY++S+DGIILP+C+P LDP 
Sbjct: 64  KLVYKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNTSIDGIILPSCVPGLDPT 123

Query: 123 SVASNYTKSHDVEYINDRNYTGAGVGTF-DNWVVLVLSTNTSTGNYASGGSSSLVVAGGG 182
           SV SNYT SHD EYIND+NYTGAGVGT  D WVVL+LSTNTSTGNY S GSSSLVVAGGG
Sbjct: 124 SVTSNYTHSHDAEYINDQNYTGAGVGTIEDAWVVLILSTNTSTGNYDSSGSSSLVVAGGG 183

Query: 183 HIGVIVAFLGMFVLALLF 200
            +GV+VA LGMFV +LLF
Sbjct: 184 RVGVMVALLGMFVSSLLF 201

[Close]

BLAST of Clc03G18490 vs. ExPASy TrEMBL
Match: A0A6J1HEB1 (uncharacterized GPI-anchored protein At5g19250-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462076 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.5e-75
Identity = 146/192 (76.04%), Postives = 171/192 (89.06%), Query Frame = 0


Query: 6   RLFTLFFFVVISNFLLLPNAVLCDVKDEDILKAINKYRQSKNLSEFSYNKNAACLASRLV 65
           R+F LFFF VI+ FLLLPNAVLCDVKD +IL AIN YRQSK+LS  ++NKNAACLASR V
Sbjct: 33  RVFALFFFAVIATFLLLPNAVLCDVKDTEILNAINNYRQSKHLSNLTHNKNAACLASRFV 92

Query: 66  YKLRDEPCSSADNFNKEISSESKLADYPKLLKKCHIAYDSSVDGIILPACIPELDPVSVA 125
           YKLRDEPCSS D+F+KEI+SE+ LAD+ KLLKKCHIAY+S+VDGI+LPAC+P LDP SVA
Sbjct: 93  YKLRDEPCSSPDDFHKEINSENTLADFLKLLKKCHIAYNSTVDGIMLPACVPHLDPKSVA 152

Query: 126 SNYTKSHDVEYINDRNYTGAGVGTFDNWVVLVLSTNTSTGNYASGGSSSLVVAGGGHIGV 185
            NYTKSHDV+YIN +N+TGAGVGT D+W+VLVLSTNTSTGN+A+GGSSSLVVA GG IG+
Sbjct: 153 DNYTKSHDVDYINSKNFTGAGVGTSDDWIVLVLSTNTSTGNFANGGSSSLVVARGGCIGI 212

Query: 186 IVAFLGMFVLAL 198
           +V FLG+FVL L
Sbjct: 213 MVGFLGLFVLLL 224

[Close]

BLAST of Clc03G18490 vs. ExPASy TrEMBL
Match: A0A6J1HY77 (uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita maxima OX=3661 GN=LOC111467926 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 6.8e-73
Identity = 142/192 (73.96%), Postives = 169/192 (88.02%), Query Frame = 0


Query: 6   RLFTLFFFVVISNFLLLPNAVLCDVKDEDILKAINKYRQSKNLSEFSYNKNAACLASRLV 65
           R+F L FF VI+ FLLLPNAVLCDV+D +IL AIN YRQ K+LS F+YNKNAACLASR V
Sbjct: 2   RVFAL-FFAVIATFLLLPNAVLCDVRDIEILNAINNYRQKKSLSNFTYNKNAACLASRFV 61

Query: 66  YKLRDEPCSSADNFNKEISSESKLADYPKLLKKCHIAYDSSVDGIILPACIPELDPVSVA 125
           YKLRDEPCSS D+FNKEI+SE+ LAD+ KLLKKCHIAY+S+VDGI+LPAC+P LDP SV+
Sbjct: 62  YKLRDEPCSSPDDFNKEINSENTLADFHKLLKKCHIAYNSTVDGIMLPACVPHLDPESVS 121

Query: 126 SNYTKSHDVEYINDRNYTGAGVGTFDNWVVLVLSTNTSTGNYASGGSSSLVVAGGGHIGV 185
           +NYTKS DV+YIN +N+TGAGVGT D+W+VL+LSTNTSTGN+A+GGSSSLVVA GG IG+
Sbjct: 122 NNYTKSRDVDYINSKNFTGAGVGTSDDWIVLILSTNTSTGNFANGGSSSLVVARGGCIGI 181

Query: 186 IVAFLGMFVLAL 198
           +  FLG+FVL L
Sbjct: 182 MAGFLGLFVLLL 192

[Close]

BLAST of Clc03G18490 vs. TAIR 10
Match: AT3G06035.1 (Glycoprotein membrane precursor GPI-anchored )

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27
Identity = 67/180 (37.22%), Postives = 106/180 (58.89%), Query Frame = 0


Query: 16  ISNFLLLPNAVLCDVKDEDI-LKAINKYRQSKNLSEFSYNKNAACLASRLVYKLRDEPCS 75
           +S  L L   VL D  +EDI L  IN YR ++NL+  S N+NA CLA  +  + +++PC+
Sbjct: 12  LSILLCLNRPVLSDTDEEDILLTGINSYRTTQNLTILSKNENAECLADEIADQFKNKPCT 71

Query: 76  SADNFNKEISSESKLADYPKLLKKCHIAYDSSVDGIILPACIPELDPVSVASNYTKSHDV 135
           +         +E + A+YP++L KCH+    + DG I+PAC+P L+   V +N+TKS   
Sbjct: 72  NDTGSATVPGTEPQFANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKSQYS 131

Query: 136 EYINDRNYTGAGVGTFDNWVVLVLSTNTSTGNYASG----GSSSLVVAGGGHIGVIVAFL 191
             +ND  +TG G+G  D+W+V+VL+TNT  G+Y++       S+    G G +  +V F+
Sbjct: 132 MSLNDSKFTGIGIGKEDDWIVVVLTTNTPEGSYSTATPTKQESNGFTFGIGLVSYLVIFM 191

[Close]

BLAST of Clc03G18490 vs. TAIR 10
Match: AT5G19250.1 (Glycoprotein membrane precursor GPI-anchored )

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-25
Identity = 69/192 (35.94%), Postives = 105/192 (54.69%), Query Frame = 0


Query: 10  LFFFVVISNFLLLPNAVLCDVKDED--ILKAINKYRQSKNLSEFSYNKNAACLASRLVYK 69
           L    ++S FL L   VL D  DE+  +L  IN YR S NL+   +N NA CLA  +  +
Sbjct: 6   LHLLFLLSVFLSLHPLVLSDTADEEDVLLTGINSYRASLNLTTLIHNHNAECLADEIADQ 65

Query: 70  LRDEPCSSADNFNKEISSESKLADYPKLLKKCHIAYDSSVDGIILPACIPELDPVSVASN 129
            +++PC++         +     + P LL KC +    + DG ILPAC+P LDP  V +N
Sbjct: 66  FKNQPCTNTTGSASVPGTTPGFPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLTN 125

Query: 130 YTKSHDVEYINDRNYTGAGVGTFDNWVVLVLSTNTSTGNYASGGSSSLVVAGGGHIGVIV 189
           +T S   + +ND  +TG G+G+ DNW+V+VL+T+T  G+Y+   +S     G   +  +V
Sbjct: 126 FTMSQYSKDLNDSKFTGIGIGSDDNWIVVVLTTSTPEGSYSPASNSGAFAFG---VNGLV 185

Query: 190 AFLGMFVLALLF 200
           +   MF+L   F
Sbjct: 186 SSSLMFLLFCFF 194

[Close]

BLAST of Clc03G18490 vs. TAIR 10
Match: AT1G54860.1 (Glycoprotein membrane precursor GPI-anchored )

HSP 1 Score: 108.6 bits (270), Expect = 5.8e-24
Identity = 62/200 (31.00%), Postives = 115/200 (57.50%), Query Frame = 0


Query: 1   MASLFRLFTLFFFVVISNFLLLPNAVLCDVKDEDILKAINKYRQSKNLSEFSYNKNAACL 60
           M  + ++   F+ + +  F L+   V+ +  ++++L+ +N YR ++ +  F+ N+ A C+
Sbjct: 1   MVLITKMSLSFYIIHLLIFSLISTCVVSNQAEDNLLQGLNSYRTAQRVPPFAKNEKADCV 60

Query: 61  ASRLVYKLRDEPCSSADNFNKEI--SSESKLADYPKLLKKCHIAYDSSVDGIILPACIPE 120
           A  +  KL D+PC++    +     S   +L +Y  +L +C I  +++ DG+ILP CIP 
Sbjct: 61  ADEIADKLEDQPCTNHTTASTVTPGSVPPRLTNYQDILSECKIDPNTTRDGLILPVCIPN 120

Query: 121 LDPVSVASNYTKSHDVEYINDRNYTGAGVGTFDNWVVLVLSTNTSTGNYASG-----GSS 180
             P    +NYT++    Y+ND  Y GAGVG+   W+V+VL+T+T  G++ +G      +S
Sbjct: 121 RIPTLALTNYTQTGYARYLNDSRYVGAGVGSEKEWMVVVLTTSTPGGSFTAGVAAGKATS 180

Query: 181 SLVVAGGGHIGVIVAFLGMF 194
             V+AG G +G++ + L +F
Sbjct: 181 VRVMAGLGLMGLLFSCLVLF 200

[Close]

BLAST of Clc03G18490 vs. TAIR 10
Match: AT5G19240.1 (Glycoprotein membrane precursor GPI-anchored )

HSP 1 Score: 96.3 bits (238), Expect = 3.0e-20
Identity = 61/172 (35.47%), Postives = 99/172 (57.56%), Query Frame = 0


Query: 15  VISNFLLLPNAVLCDVKDEDILKAI-NKYRQSKNLSEFSYNKNAACLASRLVYKLRDEPC 74
           ++S FL L   VL +   E++L  + N+YR+S NL+    NKNA CLA  +V +L+++PC
Sbjct: 12  LLSVFLSLHRPVLSNTDGENLLFTVFNQYRESVNLTNLKKNKNAECLADEVVDQLQNQPC 71

Query: 75  SSADNFNKEISSESKLADYPKLLKKCHIAYDSSVDGIILPACIPE----LDPVSVASNYT 134
           ++         ++  + ++P LL KC +  + + DG+IL  C P+     D  S A+  T
Sbjct: 72  TNTTGSASVPGTDPGIPNFPNLLAKCRLNTNVTRDGLILQVCAPKHHSTPDLSSFANVLT 131

Query: 135 KSHDVEYINDRNYTGAGVGTFDN--WVVLVLSTNTSTGNYASGGSSSLVVAG 180
           K+     +ND  +TGAGVG   +  W+V VL+TNT  G+Y++ G+ +  V G
Sbjct: 132 KN-----LNDSKFTGAGVGIDSDGIWLVTVLTTNTPGGSYSNSGAFAFGVNG 178

[Close]

BLAST of Clc03G18490 vs. TAIR 10
Match: AT5G19230.1 (Glycoprotein membrane precursor GPI-anchored )

HSP 1 Score: 88.2 bits (217), Expect = 8.1e-18
Identity = 57/161 (35.40%), Postives = 86/161 (53.42%), Query Frame = 0


Query: 10  LFFFVVISNFLLLPNAVL--CDVKDEDILKAINKYRQSKNLSEFSYNKNAACLASRLVYK 69
           L    ++S FL L   VL   D +D+ +L   NKYR   NL   + N+NA CLA  +V +
Sbjct: 6   LHLLCLLSVFLSLHRLVLSGTDGEDDLLLTVFNKYRTGLNLKTLTKNENAECLADEVVDQ 65

Query: 70  LRDEPCSSADNFNKEISSESKLADYPKLLKKCHIAYDSSVDGIILPACIPELDPVSVASN 129
           L+++PC++ +N        S       LL KC +      DG+I+  C P+ D     SN
Sbjct: 66  LKNQPCTNTNN--------SAPVPGNNLLAKCSLNTTVVRDGVIMQVCFPKHDKNPDLSN 125

Query: 130 YTKSHDVEYINDRNYTGAGVGTFDNWVVLVLSTNTSTGNYA 169
           +  S  ++ +ND   TG G+G+ D WVV++L+TNT  G Y+
Sbjct: 126 F-NSVVLKNLNDSKITGIGIGSGDIWVVVILTTNTPEGGYS 157

The following BLAST results are available for this feature:

BLAST of Clc03G18490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879946.1	2.7e-84	83.50	uncharacterized GPI-anchored protein At3g06035-like [Benincasa hispida]	[more]
XP_008450653.1	2.3e-83	82.83	PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo] >T...	[more]
KAA0050883.1	5.2e-83	82.32	putative GPI-anchored protein [Cucumis melo var. makuwa]	[more]
XP_004135621.1	4.1e-80	79.80	uncharacterized GPI-anchored protein At5g19250 [Cucumis sativus] >KAE8653371.1 h...	[more]
KAG7023953.1	3.0e-75	76.04	putative GPI-anchored protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Clc03G18490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84MC0	1.6e-26	37.22	Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 G...	[more]
P59833	1.9e-24	35.94	Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q84VZ5	4.2e-19	35.47	Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q8GUL8	1.1e-16	35.40	Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Clc03G18490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CFH2	1.1e-83	82.83	Putative GPI-anchored protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BQD0	1.1e-83	82.83	uncharacterized GPI-anchored protein At5g19250-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A5A7U4V6	2.5e-83	82.32	Putative GPI-anchored protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A6J1HEB1	1.5e-75	76.04	uncharacterized GPI-anchored protein At5g19250-like isoform X1 OS=Cucurbita mosc...	[more]
A0A6J1HY77	6.8e-73	73.96	uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of Clc03G18490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06035.1	1.1e-27	37.22	Glycoprotein membrane precursor GPI-anchored	[more]
AT5G19250.1	1.4e-25	35.94	Glycoprotein membrane precursor GPI-anchored	[more]
AT1G54860.1	5.8e-24	31.00	Glycoprotein membrane precursor GPI-anchored	[more]
AT5G19240.1	3.0e-20	35.47	Glycoprotein membrane precursor GPI-anchored	[more]
AT5G19230.1	8.1e-18	35.40	Glycoprotein membrane precursor GPI-anchored	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33976	OS07G0645000 PROTEIN	coord: 8..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G18490.1	Clc03G18490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane