Cla97C01G018005 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C01G018005
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Unknown protein
Location	Cla97Chr01: 31416176 .. 31416799 (-)
RNA-Seq Expression	Cla97C01G018005
Synteny	Cla97C01G018005

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAAAGCCCTTCCTAGTAGTATGGCATGTATCGCATGGGCCTTCGGAAACGGGGCGTTTTCCTGTAGCAGGATGTGAGGAAAATGATTTGAGTATCAACCCTGATAGATGTGTATATATAATATATATATGTCACGCAGGAAACTTACCCATATCCTCCATATGGTGAGTAAAAATAAGGGGCCATGTAAGGCCTCCTGGATCGATAACCCATGTAAGGATTGTAACGCTGAGGAAAATACTGCTTCATCCCAGGAATATTTGTTCGCTTTTGTTGAACCTGAGATGAATAGGATGATATTAAAACCATTTGTCAGAAGTTATTAGAACTTGAATTACATGTTCAGATAAATAGGATGAAATTAAAACCATTTGTCAGAAGTTATTAGAACTTGAACTACATGTACAGATAATGACGCCAATAATACAAGGTGTATAATAAGTATGCCAATTCGAATACTTGACGGAACAGACGCATGGATCATCCTTTTCTCCAAGGAACTACCTTCAATTGTCTTCCATGCAACTCTGACTCATTTAAAAGGAGTGCCTCCTGAACAGCTTCGGCTTCAACAAACTCCACATAAGCGAAGCCCTTGGGATGACCAAATTTATCCGTAA

mRNA sequence

ATGAGCAAAGCCCTTCCTAGTAGTATGGCATGTATCGCATGGGCCTTCGGAAACGGGGCGTTTTCCTGTAGCAGGATGAAACTTACCCATATCCTCCATATGGTGAGTAAAAATAAGGGGCCATGTAAGGCCTCCTGGATCGATAACCCATGTAAGGATTGTAACGCTGAGGAAAATACTGCTTCATCCCAGGAATATTTGTTCGCTTTTGTTGAACCTGAGATGAATAGGATGATATTAAAACCATTTGTCAGAAACGCATGGATCATCCTTTTCTCCAAGGAACTACCTTCAATTGTCTTCCATGCAACTCTGACTCATTTAAAAGGAGTGCCTCCTGAACAGCTTCGGCTTCAACAAACTCCACATAAGCGAAGCCCTTGGGATGACCAAATTTATCCGTAA

Coding sequence (CDS)

ATGAGCAAAGCCCTTCCTAGTAGTATGGCATGTATCGCATGGGCCTTCGGAAACGGGGCGTTTTCCTGTAGCAGGATGAAACTTACCCATATCCTCCATATGGTGAGTAAAAATAAGGGGCCATGTAAGGCCTCCTGGATCGATAACCCATGTAAGGATTGTAACGCTGAGGAAAATACTGCTTCATCCCAGGAATATTTGTTCGCTTTTGTTGAACCTGAGATGAATAGGATGATATTAAAACCATTTGTCAGAAACGCATGGATCATCCTTTTCTCCAAGGAACTACCTTCAATTGTCTTCCATGCAACTCTGACTCATTTAAAAGGAGTGCCTCCTGAACAGCTTCGGCTTCAACAAACTCCACATAAGCGAAGCCCTTGGGATGACCAAATTTATCCGTAA

Protein sequence

MSKALPSSMACIAWAFGNGAFSCSRMKLTHILHMVSKNKGPCKASWIDNPCKDCNAEENTASSQEYLFAFVEPEMNRMILKPFVRNAWIILFSKELPSIVFHATLTHLKGVPPEQLRLQQTPHKRSPWDDQIYP

Homology

The following BLAST results are available for this feature:

BLAST of Cla97C01G018005 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C01G018005 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C01G018005 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C01G018005 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..134
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..23 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G018005.1	Cla97C01G018005.1	mRNA