Cla97C01G017660 (gene) Watermelon (97103) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTAACGGCCACCACCGATCTTTGTTCAGAGGTAGCCTTGCTCCCTACCAGACCTCCGTACCAGAAAACGGCGACGCTTCCGTTGTGGACAATCTACGGGGTCGATTAGAGGAAACCGAGTCACGGCTGGCTCAAGTTAGGGCTCGAGAGGCGGAGCTCAGCCGACTCTTGGAGGAAATGAAACGATTAGTCTCTGTGATGGAGATCCTCGAGAACTACCTGAAACGGCAGTACAATTACCGCCAAGAATATGTGGTTCGTCTCCTCTCCCCTGTATCTCGAAAATAGAAATTCCTCTTCGCCGTCGGTGTCTGTAATTTTAGCGGTACCATCCAAAAATCGTTTTCCTTACTTGCATCTTCGTTCTTCTTATTCTCAGTCCTCGTTGATTGTATTCGCCATCAAATCTATGGATATATTCGCCCTTGATTTCACTTGTGAGTGGAATCGTGGAATTGATACCATTAACTCGTTCAATCGAAGGAGATTTTGAGTTTGTTGAATGAGAGCGAATTGCGAATCGCTGAAAAGAGCGTTTTGTTGTTTCTTGATGGAATTTATGGCAGTTTTCTATAATATAATTAGTCATTTTGTAAGTATTTCTCAGAGTAACACTGGTTTCCAAAATTCTTTGGATGAAACTTTGAGAAAGTCGTCCATTTCAAGTACCGAAGCGATTTCGCTTGGGAATGGAATCGTGGAATTGATACCATTAGCTCGTCCAATCGCAGGAGAGTTGAGTATGCCGAATGAGAGAGAATCCATGAGAAGAATGTTTTGTTAG ATGTGTAACGGCCACCACCGATCTTTGTTCAGAGGTAGCCTTGCTCCCTACCAGACCTCCGTACCAGAAAACGGCGACGCTTCCGTTGTGGACAATCTACGGGGTCGATTAGAGGAAACCGAGTCACGGCTGGCTCAAGTTAGGGCTCGAGAGGCGGAGCTCAGCCGACTCTTGGAGGAAATGAAACGATTAGTCTCTGTGATGGAGATCCTCGAGAACTACCTGAAACGGCAGTACAATTACCGCCAAGAATATGTGGTTCGTCTCCTCTCCCCTTCCTCGTTGATTGTATTCGCCATCAAATCTATGGATATATTCGCCCTTGATTTCACTTTTTTCTATAATATAATTAGTCATTTTGTAAGTATTTCTCAGAGTAACACTGGTTTCCAAAATTCTTTGGATGAAACTTTGAGAAAGTCGTCCATTTCAAGTACCGAAGCGATTTCGCTTGGGAATGGAATCGTGGAATTGATACCATTAGCTCGTCCAATCGCAGGAGAGTTGAGTATGCCGAATGAGAGAGAATCCATGAGAAGAATGTTTTGTTAG ATGTGTAACGGCCACCACCGATCTTTGTTCAGAGGTAGCCTTGCTCCCTACCAGACCTCCGTACCAGAAAACGGCGACGCTTCCGTTGTGGACAATCTACGGGGTCGATTAGAGGAAACCGAGTCACGGCTGGCTCAAGTTAGGGCTCGAGAGGCGGAGCTCAGCCGACTCTTGGAGGAAATGAAACGATTAGTCTCTGTGATGGAGATCCTCGAGAACTACCTGAAACGGCAGTACAATTACCGCCAAGAATATGTGGTTCGTCTCCTCTCCCCTTCCTCGTTGATTGTATTCGCCATCAAATCTATGGATATATTCGCCCTTGATTTCACTTTTTTCTATAATATAATTAGTCATTTTGTAAGTATTTCTCAGAGTAACACTGGTTTCCAAAATTCTTTGGATGAAACTTTGAGAAAGTCGTCCATTTCAAGTACCGAAGCGATTTCGCTTGGGAATGGAATCGTGGAATTGATACCATTAGCTCGTCCAATCGCAGGAGAGTTGAGTATGCCGAATGAGAGAGAATCCATGAGAAGAATGTTTTGTTAG MCNGHHRSLFRGSLAPYQTSVPENGDASVVDNLRGRLEETESRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYNYRQEYVVRLLSPSSLIVFAIKSMDIFALDFTFFYNIISHFVSISQSNTGFQNSLDETLRKSSISSTEAISLGNGIVELIPLARPIAGELSMPNERESMRRMFC Homology
BLAST of Cla97C01G017660 vs. NCBI nr
Match: XP_011657944.1 (protein SKIP34 [Cucumis sativus]) HSP 1 Score: 162.5 bits (410), Expect = 3.3e-36 Identity = 86/94 (91.49%), Postives = 87/94 (92.55%), Query Frame = 0
BLAST of Cla97C01G017660 vs. NCBI nr
Match: XP_008440533.1 (PREDICTED: protein SKIP34 [Cucumis melo] >KAA0036348.1 protein SKIP34 [Cucumis melo var. makuwa] >TYK12742.1 protein SKIP34 [Cucumis melo var. makuwa]) HSP 1 Score: 161.4 bits (407), Expect = 7.5e-36 Identity = 86/94 (91.49%), Postives = 87/94 (92.55%), Query Frame = 0
BLAST of Cla97C01G017660 vs. NCBI nr
Match: XP_022978829.1 (protein SKIP34 [Cucurbita maxima]) HSP 1 Score: 157.9 bits (398), Expect = 8.2e-35 Identity = 82/94 (87.23%), Postives = 88/94 (93.62%), Query Frame = 0
BLAST of Cla97C01G017660 vs. NCBI nr
Match: XP_023544310.1 (protein SKIP34 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 157.1 bits (396), Expect = 1.4e-34 Identity = 82/94 (87.23%), Postives = 87/94 (92.55%), Query Frame = 0
BLAST of Cla97C01G017660 vs. NCBI nr
Match: XP_022950522.1 (protein SKIP34 [Cucurbita moschata]) HSP 1 Score: 156.0 bits (393), Expect = 3.1e-34 Identity = 84/95 (88.42%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Cla97C01G017660 vs. ExPASy Swiss-Prot
Match: Q8GWU7 (Protein SKIP34 OS=Arabidopsis thaliana OX=3702 GN=SKIP34 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.2e-15 Identity = 49/94 (52.13%), Postives = 66/94 (70.21%), Query Frame = 0
BLAST of Cla97C01G017660 vs. ExPASy TrEMBL
Match: A0A0A0KIR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G498950 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 1.6e-36 Identity = 86/94 (91.49%), Postives = 87/94 (92.55%), Query Frame = 0
BLAST of Cla97C01G017660 vs. ExPASy TrEMBL
Match: A0A5D3CN14 (Protein SKIP34 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003300 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 3.6e-36 Identity = 86/94 (91.49%), Postives = 87/94 (92.55%), Query Frame = 0
BLAST of Cla97C01G017660 vs. ExPASy TrEMBL
Match: A0A1S3B1B8 (protein SKIP34 OS=Cucumis melo OX=3656 GN=LOC103484928 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 3.6e-36 Identity = 86/94 (91.49%), Postives = 87/94 (92.55%), Query Frame = 0
BLAST of Cla97C01G017660 vs. ExPASy TrEMBL
Match: A0A6J1IV54 (protein SKIP34 OS=Cucurbita maxima OX=3661 GN=LOC111478670 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 4.0e-35 Identity = 82/94 (87.23%), Postives = 88/94 (93.62%), Query Frame = 0
BLAST of Cla97C01G017660 vs. ExPASy TrEMBL
Match: A0A6J1GF20 (protein SKIP34 OS=Cucurbita moschata OX=3662 GN=LOC111453605 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 1.5e-34 Identity = 84/95 (88.42%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Cla97C01G017660 vs. TAIR 10
Match: AT5G65495.1 (unknown protein; Has 9 Blast hits to 9 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 84.7 bits (208), Expect = 8.3e-17 Identity = 49/94 (52.13%), Postives = 66/94 (70.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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