Sed0023703 (gene) Chayote v1

Overview


Name	Sed0023703
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Complex I-B22
Location	LG01: 1995675 .. 2000232 (-)
RNA-Seq Expression	Sed0023703
Synteny	Sed0023703

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACGGTGCGTTTGGATAATGGTTAAACGGCGTCGTGTTAGGTGTTAATCAGTCCCAATGAAAGCCCCAATCAAAGAAGAACACAAAAACAGTGAATACAGAGTCAGCGATTGAGAGGAGGAGAACGATGAGCTTTACGTCGACGGCGGCGTATTTGGGGCGGCGATCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCTCTCAAAGACACTCTCAACTGGGCCGTTCATCGCCATCTCTTCTACAAAGATGTATTCCATTTCCATTTCCGTTTTCACTTTTCTGCTTTTCAGATTTCTTCCATTCTAAATTCTGATTCGGTGATTTTTTTGCTGTTTTTTCTTTGTTTTAGGCTTCTGATCTTCGGGAGAGATTCGAGGCTAACAAGCATGTGGTGCGCTCTTTGTTTATTCCTTTAATTTCGTTTTTTATCGTTGATTTGAAATTTCTGCGTTGCGACCTCTTGTTTTGTGCTGCCGGATTCATGTTTGAGCTATACTGTGTGTGTGTGTGTTTTTAAATTTTTTTTAATTACGAATGTTTTTCGTTTAGAATGTTGTATGATTCTTGATGAAACATTCAAATGTGGTTTGTATTGATCTCTTATTTTTTATGGGAAACTAGAAAATGGTTACAATCTATCAAGATGAGAAGCGGAGAGGAAGTTATAAATGTATAAAGATATGAAGAGAAGGATATAAATATATGAACGAGAAACTTTCGTTGCTTAGTAGTTATGTTGTTTGTATTGATAGTTTTGGATTAGTGTTTGTGTTGTGATTTAGTTGTTATGTTCTCTGGATTGGCATTGTTGATTGATCCTTGATTTTCGTCTGAATATTGCTTTTGGATAATTGCGGATTGTACAATATGATATGCTGGGAATTTATTATGATGATCGTCCATAAACAAAGGATGTGTGCTTGGATTGTAGGATGTCCCTTATTTATTTCAATAACATGTAGGGTGGAGGTTTGAGTCAGAAAACCAGTTTGTAATTTCATTCATTATTGAAATTGTTTCTTATCCAAAATAATAAAATTATGGTTGTAATCAGTTGAGATGTCCCATATTTTAGGATTATATCACCCTCAATTTGTGTTTCAGATGAGTAAGCATTCTCTTGTAGAATTTATTTTTCTAGAAAGTTTAACAATTGAGTACTTATCCTTGGAGTTAAAGTAAAATAAGTTTGACATTTGATGTTCGTTAGCCCTGAGAATTGGGAAACTTATGGGAGTTTAACTTGAAATTATATTGAGTGATTTCAATAAAACTCAAGTATGTCATGACATAGCGGTCCACTTATGTTTTTGGAAATTTGTTTAAATCTTAGAGATCTCTGATTAAGTGAGTGTACAAACTCTGAATATGGTGTAAGGTGAATGTCTGCATGTATGAACTGGCAAATTTTAGTTATCAAGCTATATTTTCTATGCTATTGATCTTTTTGCTTATAGATCCTTCTTTGGGTGGATTTGCAGGAAGATCTTGACACAATAGACAAGCTGATAGCTGATGGGGAAGCTTCCTATAATAAGTGGAGACACCCTGATCCATATATTGGTAAGCACAATCATGAATGGATTTGATTATGCTTTTTTAACAAGAAACAACACTTTTCATTGATAAATGAAAAGAGAATATTGCTTGAGGATACAAGCTCCACTAGGGAGCTAAAGAAAGCAAGTAAAAACATAAAGTTAAAACAACAAGAAGCCATCCTGAAAATAAAAACCAGAGAGAGAAAATCAACCTAAGGATAATAGAGGAAATAAAATGGAACTACGAAACCAATCCAACTAAGTTAGCAATCCAACAAAAATCTCCTGCAAACAACAAGATCTCTGATTCCAAATTAGCCAGCTAAACCCTTGCTTTGTTTACTAAAAATGCCATTATCAGACCATGGAGTGTTTCACTTAAAAAAGAAAACAATCTCCTGGTATTCACAGAAAAATGGAGACTCAAGTTTTTTCTCAAAAGATCACCTGGAATCACAGAACAACTGCATGCCCCTACTACATTTGGTTTTCAAGTGAACATTTAGGAAATTTATTTTAGGTAGTAGCCACCATACATTGAGTTCATTTCTTCTTAGTTTTCCAATGCCCTTGTGACGACTAAGTCAACCCATGGTGGTTAAGAATTTTTTTCTTATTTCTGAACAATAAAACAAAAGTGAAACCTTTTCTTTGTTCCAAAAAATGAATCTAGAGTGACAGAGATTAGCAGTATTGTGATCTCAAAAGTTCAAGGAAGGCAGAGAGTATGGAAATGGACTCAATCATGGAACGTAGGTACTTAGATGCTCACGATCTTTAATTTCTACCAATTAGACCCAATCATATGGATAGCCATCCCCTTAACATCCATTATTACATCAAAGGATCCAACTCCGCATGGGGTTATGAAGATTTTTGCTTCATAAGTGATCTTCAATTCTATTTGTGTGTCAATCTCTGCATAAAGCTTTTGAGAAATTCTCTCTTTTTCATAAAATATGATGGTCTTCATTGAGTTTGGAACTACAAATCTTCAATTCTGGAATATATTTGTAGATGATAAGTAGTCAAATTGCTAGCATGCTTATCTAAATACAATGTTCTTTTTCCCCCTTCCAACCTACAAATGGTCGCCTCCTGTTATTTGACTTTTATTGACAATGAAAACTTCATGTCTGTTTTTTCAATTTCGTTTGCATGTATTATGATATTTATGCAGCTGTTAATCTTTTAATAAATTTTCCTTTTCCTCTGCACTGCAGTTCCTTGGGCTCCCGGTGGTTCTAAGTTTACGCGAAACCCAACTCCACCTCCTGGGGTAAGTTTCTTTTAGAAGAATGTTAACCTATTCCTTTTTGTTTTTCTAAGTGGTCATTCCTTCTCTTCCTTTCTTAACAATGCTATTGTTATTACTTTTATTTGCATATACATGCTTTTTTAATGAAAAATCAAACTTTCATCGAGAAACATGGAATCCATCTCAAAGATCTCTTTCAAGCCCCGGAAAGGTTCTATTGTTCCTCTCACCCCCACAACCCCTAAACATTATCACAGATCTAAGCCTAACAAGAACCTCTCATTCTCCCGAAATGGCGGATAGAGAAGGAACTCCTAGATCGTCCTTAGAACTATTTAAGCATCATTAACCATGATGGTCCTAAGCATTACTGAGCTATATAGCATAGCATTATTAGCCACCTCGTCCGTGACTATTCAAGAGAAGCCATGATGTAGAGAGTGCATCGCAATTATAAGCGCCGTGCCCTTTATTTGGTTCATTGCCCTAATGTAAAGAAACATAAAGTTCTGAAATATGTATAGTTTGTTTCCTTGTGACATTTTCTTTTTAAAAGATAATATACTGGTGTAAGCTAGACTCACTTTCCCCTACATTAAGAGCACTTGAAAATGGTAACTAGGACTATAAAAGCACACAATCATCGAGGGGAGTGGCTTGGTGGTCAAAAGGACCTTGGGGAATTAAGAGGGGATGGATTCAATCACATGGTAGTCACCTACTTAGAATAGGAATTAATTTTCTTTAGGTTTCCTTGACATCTAAATGTTTCATTATAGTAGTCAAAGTGTGTATAATGTGGCTCGGATTGTTACGAATATAAAAATAAAAATAAAATAAGAAGCACAGGAACTAAGTTCCATGTATCTTGTGTGTGTGTATTTATATATATATATCGTAGTTGACTTGAGTTCTCTACTTGTCTTTTTTATAGCTTTTTATACCATGTTTCTGTAGTCTCAAACAAATTCACTGACTCCATCTATGTACAGATCGAGATAATATATGACTATGGGCGGGAAGGTAACTGAAATCTTCATTTTCATGGTAATAAATAAAGGTAAGCTTTCACTATTTTCCCCAATCTGAATGCACTACCTATTATATTATTTATTCAATAGTGTGTTTTGTAATATTATTGCATGGAAATTATTAAACTGATCGATTGCCCCTTTAACGAGTGAAATTTGTGAACCCCATTTTGCGGAAACAATTTTCAAAATATAAGCTAATACACACTATTAACGCATGCCAGTGCATCGATCCCATCTGAACTCTGCGGTTAAGCATGTTTAAGTGAGAGTAGTACTTGGTTGGGTAATCACTTGAAAAGTCTTCGTGATGCACCCTTTTTAAAAAGTCTTTATAAAAAAAAAAAGCTGATACTAATAACAATAGTTTTCAATAAATAATTGCCATGGTTTGGTTTGTACCAATATGATTATAGCTCAATTAGCATAAAATCTATATTATCGATTGAGATATCAAATATTCAAAATCTTTATGTTGGAGTTCTAATATAGATGCTACATTACATCTTTCTGCTGCAGGTTTAAATGATTCGTTGCTTCGTCTTAGTTGATGATGATAAAGGGAGAGCTTTTGATGTGTAAAAACTTTGAATGAACACAAATTATAGTAATCCTTGTTGTTGATTTCTACTTTTGCTTAGAAAAATCACCATTGGAACGGTGCATTATGATGTTGCAACTTTTGATTAATTTAAGAGTTCATCCTTTGAATGTCCA

mRNA sequence

AAACGGTGCGTTTGGATAATGGTTAAACGGCGTCGTGTTAGGTGTTAATCAGTCCCAATGAAAGCCCCAATCAAAGAAGAACACAAAAACAGTGAATACAGAGTCAGCGATTGAGAGGAGGAGAACGATGAGCTTTACGTCGACGGCGGCGTATTTGGGGCGGCGATCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCTCTCAAAGACACTCTCAACTGGGCCGTTCATCGCCATCTCTTCTACAAAGATGCTTCTGATCTTCGGGAGAGATTCGAGGCTAACAAGCATGTGGAAGATCTTGACACAATAGACAAGCTGATAGCTGATGGGGAAGCTTCCTATAATAAGTGGAGACACCCTGATCCATATATTGTTCCTTGGGCTCCCGGTGGTTCTAAGTTTACGCGAAACCCAACTCCACCTCCTGGGATCGAGATAATATATGACTATGGGCGGGAAGGTAACTGAAATCTTCATTTTCATGGTAATAAATAAAGGTTTAAATGATTCGTTGCTTCGTCTTAGTTGATGATGATAAAGGGAGAGCTTTTGATGTGTAAAAACTTTGAATGAACACAAATTATAGTAATCCTTGTTGTTGATTTCTACTTTTGCTTAGAAAAATCACCATTGGAACGGTGCATTATGATGTTGCAACTTTTGATTAATTTAAGAGTTCATCCTTTGAATGTCCA

Coding sequence (CDS)

ATGAGCTTTACGTCGACGGCGGCGTATTTGGGGCGGCGATCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCTCTCAAAGACACTCTCAACTGGGCCGTTCATCGCCATCTCTTCTACAAAGATGCTTCTGATCTTCGGGAGAGATTCGAGGCTAACAAGCATGTGGAAGATCTTGACACAATAGACAAGCTGATAGCTGATGGGGAAGCTTCCTATAATAAGTGGAGACACCCTGATCCATATATTGTTCCTTGGGCTCCCGGTGGTTCTAAGTTTACGCGAAACCCAACTCCACCTCCTGGGATCGAGATAATATATGACTATGGGCGGGAAGGTAACTGA

Protein sequence

MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYDYGREGN

Homology

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BLAST of Sed0023703 vs. NCBI nr
Match: XP_023532128.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.0 bits (580), Expect = 4.1e-56
Identity = 106/114 (92.98%), Postives = 111/114 (97.37%), Query Frame = 0


Query: 1   MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVED 60
           MS +STA YL RR+AQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERFEANK+VED
Sbjct: 1   MSISSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVED 60

Query: 61  LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYDYGRE 115
           +DTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYDYGRE
Sbjct: 61  VDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYDYGRE 114

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BLAST of Sed0023703 vs. NCBI nr
Match: XP_022944756.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X1 [Cucurbita moschata] >XP_022944757.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X1 [Cucurbita moschata] >XP_022986637.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X1 [Cucurbita maxima] >XP_022986638.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X1 [Cucurbita maxima] >XP_022986639.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X1 [Cucurbita maxima] >XP_023511797.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.9 bits (577), Expect = 9.2e-56
Identity = 104/114 (91.23%), Postives = 111/114 (97.37%), Query Frame = 0


Query: 1   MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVED 60
           MSF+STA YL RR+AQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERF+ANKHVED
Sbjct: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVED 60

Query: 61  LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYDYGRE 115
           LD ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIY+YGRE
Sbjct: 61  LDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYNYGRE 114

[Close]

BLAST of Sed0023703 vs. NCBI nr
Match: XP_022146081.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Momordica charantia])

HSP 1 Score: 226.5 bits (576), Expect = 1.2e-55
Identity = 106/114 (92.98%), Postives = 110/114 (96.49%), Query Frame = 0


Query: 1   MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVED 60
           MSF+STA YL RR+AQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERFEANKHVED
Sbjct: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVED 60

Query: 61  LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYDYGRE 115
           LDTIDKLIA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPTPP GIEIIYDYGRE
Sbjct: 61  LDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPTPPAGIEIIYDYGRE 114

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BLAST of Sed0023703 vs. NCBI nr
Match: XP_038902763.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Benincasa hispida])

HSP 1 Score: 225.3 bits (573), Expect = 2.7e-55
Identity = 105/114 (92.11%), Postives = 110/114 (96.49%), Query Frame = 0


Query: 1   MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVED 60
           MSF+STA YL RR+AQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERFEA+KHVED
Sbjct: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAHKHVED 60

Query: 61  LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYDYGRE 115
           LDTID+LIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPP GIEIIY YGRE
Sbjct: 61  LDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPEGIEIIYGYGRE 114

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BLAST of Sed0023703 vs. NCBI nr
Match: KAG6605042.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 224.6 bits (571), Expect = 4.5e-55
Identity = 104/116 (89.66%), Postives = 111/116 (95.69%), Query Frame = 0


Query: 1   MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVED 60
           MS +STA YL RR+AQ+ERVRILYRRALKDTLNWAVHRHLFY+DASDLRERFEANK+VED
Sbjct: 1   MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVED 60

Query: 61  LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYDYGREGN 117
           LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPP G+EIIYDYGRE +
Sbjct: 61  LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPSGVEIIYDYGRENH 116

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BLAST of Sed0023703 vs. ExPASy Swiss-Prot
Match: Q945M1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Arabidopsis thaliana OX=3702 GN=CIB22 PE=1 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.4e-51
Identity = 94/116 (81.03%), Postives = 102/116 (87.93%), Query Frame = 0


Query: 1   MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVED 60
           MS  STAAY  RR+AQKERVRILYRRALKDTLNWAVHRH+FY+DASDLRE+F  N+ VED
Sbjct: 1   MSGVSTAAYFARRAAQKERVRILYRRALKDTLNWAVHRHIFYRDASDLREKFNVNQDVED 60

Query: 61  LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYDYGREGN 117
           +D IDKLIA GEA YNKWRHPDPYIVPWAPGGSKF RNPTPP GIEI+Y+YG E N
Sbjct: 61  VDRIDKLIAHGEAEYNKWRHPDPYIVPWAPGGSKFCRNPTPPAGIEIVYNYGLEDN 116

[Close]

BLAST of Sed0023703 vs. ExPASy Swiss-Prot
Match: Q02369 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Bos taurus OX=9913 GN=NDUFB9 PE=1 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-10
Identity = 34/97 (35.05%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 1  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVED 60
          M+F S+ AYL      +++V  LY+RAL+   +W +HR  +   A  LR RF+ +K+ +D
Sbjct: 1  MAFLSSGAYL----THQQKVLRLYKRALRHLESWCIHRDKYRYFACLLRARFDEHKNEKD 60

Query: 61 LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR 98
          +    +L+ + E  +   +HP PYI P +PGG+ + R
Sbjct: 61 MVKATQLLREAEEEFWHGQHPQPYIFPESPGGTSYER 93

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BLAST of Sed0023703 vs. ExPASy Swiss-Prot
Match: Q9CQJ8 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Mus musculus OX=10090 GN=Ndufb9 PE=1 SV=3)

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-10
Identity = 34/97 (35.05%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 1  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVED 60
          M+F +  AYL      +++V  LY+RAL+   +W +HR  +   A  +R RFE +K+ +D
Sbjct: 1  MAFCAPPAYL----THQQKVLRLYKRALRHLESWCIHRDKYRYFACLMRARFEEHKNEKD 60

Query: 61 LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR 98
          +    +L+ + E  + + +HP PYI P +PGG+ F R
Sbjct: 61 MMRATQLLREAEEEFWQNQHPQPYIFPDSPGGTSFER 93

[Close]

BLAST of Sed0023703 vs. ExPASy Swiss-Prot
Match: Q0MQE8 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Pongo abelii OX=9601 GN=NDUFB9 PE=2 SV=3)

HSP 1 Score: 62.8 bits (151), Expect = 3.0e-09
Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 0


Query: 1  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVED 60
          M+F ++ AYL  R    ++V  LY+RAL+   +W V R  +   A  +R RFE +K+ +D
Sbjct: 1  MAFLASGAYLTHR----QKVLRLYKRALRHLESWCVQRDKYRYFACLMRARFEEHKNEKD 60

Query: 61 LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR 98
          +    +L+ + E  +   +HP PYI P +PGG+ + R
Sbjct: 61 MVRATQLLKEAEEEFWYRQHPQPYIFPDSPGGTSYER 93

[Close]

BLAST of Sed0023703 vs. ExPASy Swiss-Prot
Match: Q0MQE9 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Gorilla gorilla gorilla OX=9595 GN=NDUFB9 PE=2 SV=3)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08
Identity = 32/97 (32.99%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 1  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVED 60
          M+F ++  YL      +++V  LY+RAL+   +W V R  +   A  +R RFE +K+ +D
Sbjct: 1  MAFLASGRYL----THQQKVLRLYKRALRHLESWCVQRDKYRYFACLMRARFEEHKNEKD 60

Query: 61 LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR 98
          +    +L+ + E  +   +HP PYI P +PGG+ + R
Sbjct: 61 MAKATQLLKEAEEEFWYRQHPQPYIFPDSPGGTSYER 93

[Close]

BLAST of Sed0023703 vs. ExPASy TrEMBL
Match: A0A6J1J845 (Complex I-B22 OS=Cucurbita maxima OX=3661 GN=LOC111484318 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.4e-56
Identity = 104/114 (91.23%), Postives = 111/114 (97.37%), Query Frame = 0


Query: 1   MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVED 60
           MSF+STA YL RR+AQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERF+ANKHVED
Sbjct: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVED 60

Query: 61  LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYDYGRE 115
           LD ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIY+YGRE
Sbjct: 61  LDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYNYGRE 114

[Close]

BLAST of Sed0023703 vs. ExPASy TrEMBL
Match: A0A6J1FYY7 (Complex I-B22 OS=Cucurbita moschata OX=3662 GN=LOC111449115 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.4e-56
Identity = 104/114 (91.23%), Postives = 111/114 (97.37%), Query Frame = 0


Query: 1   MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVED 60
           MSF+STA YL RR+AQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERF+ANKHVED
Sbjct: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVED 60

Query: 61  LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYDYGRE 115
           LD ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIY+YGRE
Sbjct: 61  LDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYNYGRE 114

[Close]

BLAST of Sed0023703 vs. ExPASy TrEMBL
Match: A0A6J1CYA5 (Complex I-B22 OS=Momordica charantia OX=3673 GN=LOC111015377 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 5.8e-56
Identity = 106/114 (92.98%), Postives = 110/114 (96.49%), Query Frame = 0


Query: 1   MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVED 60
           MSF+STA YL RR+AQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERFEANKHVED
Sbjct: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVED 60

Query: 61  LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYDYGRE 115
           LDTIDKLIA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPTPP GIEIIYDYGRE
Sbjct: 61  LDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPTPPAGIEIIYDYGRE 114

[Close]

BLAST of Sed0023703 vs. ExPASy TrEMBL
Match: A0A6J1L2P5 (Complex I-B22 OS=Cucurbita maxima OX=3661 GN=LOC111499865 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.9e-55
Identity = 103/114 (90.35%), Postives = 111/114 (97.37%), Query Frame = 0


Query: 1   MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVED 60
           MS +STA YL RR+AQ+ERVRILYRRALK+TLNWAVHRHLFY+DASDLRERFEANK+VED
Sbjct: 1   MSISSTAGYLARRAAQRERVRILYRRALKETLNWAVHRHLFYRDASDLRERFEANKNVED 60

Query: 61  LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYDYGRE 115
           LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPG+EIIY+YGRE
Sbjct: 61  LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGVEIIYNYGRE 114

[Close]

BLAST of Sed0023703 vs. ExPASy TrEMBL
Match: A0A1S3CDS7 (Complex I-B22 OS=Cucumis melo OX=3656 GN=LOC103499726 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 6.4e-55
Identity = 104/114 (91.23%), Postives = 109/114 (95.61%), Query Frame = 0


Query: 1   MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVED 60
           MSF+STA YL RR+AQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEAN+HVED
Sbjct: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVED 60

Query: 61  LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYDYGRE 115
           LDTIDKLI +GEASY+KWRHPDPYIVPWAPGGSKFTRNP PP GIEIIYDYGRE
Sbjct: 61  LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGRE 114

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BLAST of Sed0023703 vs. TAIR 10
Match: AT4G34700.1 (LYR family of Fe/S cluster biogenesis protein )

HSP 1 Score: 203.4 bits (516), Expect = 1.0e-52
Identity = 94/116 (81.03%), Postives = 102/116 (87.93%), Query Frame = 0


Query: 1   MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVED 60
           MS  STAAY  RR+AQKERVRILYRRALKDTLNWAVHRH+FY+DASDLRE+F  N+ VED
Sbjct: 1   MSGVSTAAYFARRAAQKERVRILYRRALKDTLNWAVHRHIFYRDASDLREKFNVNQDVED 60

Query: 61  LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYDYGREGN 117
           +D IDKLIA GEA YNKWRHPDPYIVPWAPGGSKF RNPTPP GIEI+Y+YG E N
Sbjct: 61  VDRIDKLIAHGEAEYNKWRHPDPYIVPWAPGGSKFCRNPTPPAGIEIVYNYGLEDN 116

The following BLAST results are available for this feature:

BLAST of Sed0023703 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532128.1	4.1e-56	92.98	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like [Cucurbita pepo...	[more]
XP_022944756.1	9.2e-56	91.23	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X1 [Cuc...	[more]
XP_022146081.1	1.2e-55	92.98	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Momordica charantia...	[more]
XP_038902763.1	2.7e-55	92.11	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Benincasa hispida]	[more]
KAG6605042.1	4.5e-55	89.66	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, partial [Cucurbita ...	[more]

BLAST of Sed0023703 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q945M1	1.4e-51	81.03	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Arabidopsis thali...	[more]
Q02369	1.6e-10	35.05	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Bos taurus OX=991...	[more]
Q9CQJ8	3.5e-10	35.05	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Mus musculus OX=1...	[more]
Q0MQE8	3.0e-09	35.05	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Pongo abelii OX=9...	[more]
Q0MQE9	1.1e-08	32.99	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Gorilla gorilla g...	[more]

BLAST of Sed0023703 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J845	4.4e-56	91.23	Complex I-B22 OS=Cucurbita maxima OX=3661 GN=LOC111484318 PE=3 SV=1	[more]
A0A6J1FYY7	4.4e-56	91.23	Complex I-B22 OS=Cucurbita moschata OX=3662 GN=LOC111449115 PE=3 SV=1	[more]
A0A6J1CYA5	5.8e-56	92.98	Complex I-B22 OS=Momordica charantia OX=3673 GN=LOC111015377 PE=3 SV=1	[more]
A0A6J1L2P5	2.9e-55	90.35	Complex I-B22 OS=Cucurbita maxima OX=3661 GN=LOC111499865 PE=3 SV=1	[more]
A0A1S3CDS7	6.4e-55	91.23	Complex I-B22 OS=Cucumis melo OX=3656 GN=LOC103499726 PE=3 SV=1	[more]

BLAST of Sed0023703 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34700.1	1.0e-52	81.03	LYR family of Fe/S cluster biogenesis protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008011	Complex 1 LYR protein	PFAM	PF05347	Complex1_LYR	coord: 19..72 e-value: 1.4E-7 score: 31.5
None	No IPR available	PANTHER	PTHR12868:SF0	NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 9	coord: 2..114
None	No IPR available	CDD	cd20263	Complex1_LYR_NDUFB9_LYRM3	coord: 16..92 e-value: 3.27602E-37 score: 118.82
IPR033034	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9	PANTHER	PTHR12868	NADH-UBIQUINONE OXIDOREDUCTASE B22 SUBUNIT	coord: 2..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023703.1	Sed0023703.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
cellular_component	GO:0005747	mitochondrial respiratory chain complex I