Cla97C09G179110 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C09G179110
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Unknown protein
Location	Cla97Chr09: 32644642 .. 32645039 (+)
RNA-Seq Expression	Cla97C09G179110
Synteny	Cla97C09G179110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGCAATGGTAGAGTCATGGATGAGCGAGCTGGGGAAATGGAAAAACAGAGTTGAAGCTCAAAACAACAAGAAGAAGCCATTGATGCCCAAATCCAAGCAACTGCAACTACATCAACTCAAACAATCCAATAATCACATGGCGGATTCCGACGACACAGAAACCACCACCCTCTCTGAATCCACCATTTGTTTGCTCATAGATCGTTTTGCTCCCTTGTGATGCCCCGTTTTTCCTCTCTTTCTAAATGAACTAGATTTGTAATTTGCCTTATGCTCACCGCCGTTTCCAGGGAGGACAGAGGAGGAGAGTACGGTGGCCAGTCGTTCTTCTCTTCTCTCGCAGGTGTCGGTGCCGTTGCCGTGGTTGGAAACTTCTGGCTTTCGGTTCTTTAA

mRNA sequence

ATGTCGGCAATGGTAGAGTCATGGATGAGCGAGCTGGGGAAATGGAAAAACAGAGTTGAAGCTCAAAACAACAAGAAGAAGCCATTGATGCCCAAATCCAAGCAACTGCAACTACATCAACTCAAACAATCCAATAATCACATGGCGGATTCCGACGACACAGAAACCACCACCCTCTCTGAATCCACCATTTGTTTGCTCATAGATCGTTTTGCTCCCTTGGAGGACAGAGGAGGAGAGTACGGTGGCCAGTCGTTCTTCTCTTCTCTCGCAGGTGTCGGTGCCGTTGCCGTGGTTGGAAACTTCTGGCTTTCGGTTCTTTAA

Coding sequence (CDS)

ATGTCGGCAATGGTAGAGTCATGGATGAGCGAGCTGGGGAAATGGAAAAACAGAGTTGAAGCTCAAAACAACAAGAAGAAGCCATTGATGCCCAAATCCAAGCAACTGCAACTACATCAACTCAAACAATCCAATAATCACATGGCGGATTCCGACGACACAGAAACCACCACCCTCTCTGAATCCACCATTTGTTTGCTCATAGATCGTTTTGCTCCCTTGGAGGACAGAGGAGGAGAGTACGGTGGCCAGTCGTTCTTCTCTTCTCTCGCAGGTGTCGGTGCCGTTGCCGTGGTTGGAAACTTCTGGCTTTCGGTTCTTTAA

Protein sequence

MSAMVESWMSELGKWKNRVEAQNNKKKPLMPKSKQLQLHQLKQSNNHMADSDDTETTTLSESTICLLIDRFAPLEDRGGEYGGQSFFSSLAGVGAVAVVGNFWLSVL

Homology

[Close]

BLAST of Cla97C09G179110 vs. NCBI nr
Match: KGN61756.1 (hypothetical protein Csa_006080 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 2.7e-22
Identity = 62/76 (81.58%), Postives = 66/76 (86.84%), Query Frame = 0


Query: 1   MSAMVESWMSELGKWKNRVEAQ-NNKKKPLMPKSKQLQLHQLKQ-SNNHMADSDDTETTT 60
           MSAMVESWM+ELGKW+NRVEAQ NN KKPLMPKSKQLQ    KQ +  HMADSDDTET+ 
Sbjct: 37  MSAMVESWMNELGKWRNRVEAQDNNNKKPLMPKSKQLQTDHFKQPAKTHMADSDDTETSV 96

Query: 61  LSESTICLLIDRFAPL 75
           LSESTICLLIDRFAPL
Sbjct: 97  LSESTICLLIDRFAPL 112

[Close]

BLAST of Cla97C09G179110 vs. NCBI nr
Match: KAG6571144.1 (hypothetical protein SDJN03_30059, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 89.0 bits (219), Expect = 2.7e-14
Identity = 52/73 (71.23%), Postives = 56/73 (76.71%), Query Frame = 0


Query: 1  MSAMVESWMSELGKWKNRVEAQNNKKKPLMPKSKQLQLHQLKQSNNHMADSDDTETTTLS 60
          MSAMVESWMSELGKWKNRVEAQ  KKKPLMPKS     +Q  Q++   A SDDTET    
Sbjct: 1  MSAMVESWMSELGKWKNRVEAQ-KKKKPLMPKS-----NQFLQNDVVSAHSDDTETERER 60

Query: 61 ESTICLLIDRFAP 74
          E+TICLLIDRFAP
Sbjct: 61 ETTICLLIDRFAP 67

[Close]

BLAST of Cla97C09G179110 vs. NCBI nr
Match: KAG6605111.1 (hypothetical protein SDJN03_02428, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 80.9 bits (198), Expect = 7.5e-12
Identity = 57/103 (55.34%), Postives = 65/103 (63.11%), Query Frame = 0


Query: 1   MSAMVESWMSELGKWKNRVEAQNNKKKPLMPKSKQLQLHQLKQSNNHM---ADSDDTETT 60
           M+AMVESWMSELGKWKNRVEAQ  KKKPLMPKSK      LK+S N++   ADSDD E  
Sbjct: 1   MAAMVESWMSELGKWKNRVEAQ--KKKPLMPKSKLCHQRDLKESENNLVISADSDDRE-A 60

Query: 61  TLSESTICLLID-----RFAPL------------EDRGGEYGG 84
           TLS+STI  + D     R AP             E+RGG+ GG
Sbjct: 61  TLSDSTILCVNDFIIELRPAPALGLAVVSPPCWEEERGGDGGG 100

[Close]

BLAST of Cla97C09G179110 vs. NCBI nr
Match: OMO75267.1 (hypothetical protein CCACVL1_16259 [Corchorus capsularis] >OMO92173.1 hypothetical protein COLO4_17779 [Corchorus olitorius])

HSP 1 Score: 55.5 bits (132), Expect = 3.4e-04
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 0


Query: 1  MSAMVESWMSELGKWKNRVEAQNNKKKPLMPKSKQLQLHQLKQSNN---HMADSDDTETT 60
          MSA+V  WM EL K K +V+A   +++PL   S+  +  QL +  +     A  DDT  T
Sbjct: 1  MSAIVGEWMDELAKLKEKVQA---RRRPLFLSSRPKKEQQLAKEGHVEQKEAAKDDTNET 60

Query: 61 TLSESTICLLIDRFAP 74
          T+SE+T+CLL+DRF P
Sbjct: 61 TMSETTVCLLMDRFVP 73

[Close]

BLAST of Cla97C09G179110 vs. ExPASy TrEMBL
Match: A0A0A0LP24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237740 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.3e-22
Identity = 62/76 (81.58%), Postives = 66/76 (86.84%), Query Frame = 0


Query: 1   MSAMVESWMSELGKWKNRVEAQ-NNKKKPLMPKSKQLQLHQLKQ-SNNHMADSDDTETTT 60
           MSAMVESWM+ELGKW+NRVEAQ NN KKPLMPKSKQLQ    KQ +  HMADSDDTET+ 
Sbjct: 37  MSAMVESWMNELGKWRNRVEAQDNNNKKPLMPKSKQLQTDHFKQPAKTHMADSDDTETSV 96

Query: 61  LSESTICLLIDRFAPL 75
           LSESTICLLIDRFAPL
Sbjct: 97  LSESTICLLIDRFAPL 112

[Close]

BLAST of Cla97C09G179110 vs. ExPASy TrEMBL
Match: A0A1R3HY48 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_16259 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-04
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 0


Query: 1  MSAMVESWMSELGKWKNRVEAQNNKKKPLMPKSKQLQLHQLKQSNN---HMADSDDTETT 60
          MSA+V  WM EL K K +V+A   +++PL   S+  +  QL +  +     A  DDT  T
Sbjct: 1  MSAIVGEWMDELAKLKEKVQA---RRRPLFLSSRPKKEQQLAKEGHVEQKEAAKDDTNET 60

Query: 61 TLSESTICLLIDRFAP 74
          T+SE+T+CLL+DRF P
Sbjct: 61 TMSETTVCLLMDRFVP 73

[Close]

BLAST of Cla97C09G179110 vs. ExPASy TrEMBL
Match: A0A1R3JBF3 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_17779 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-04
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 0


Query: 1  MSAMVESWMSELGKWKNRVEAQNNKKKPLMPKSKQLQLHQLKQSNN---HMADSDDTETT 60
          MSA+V  WM EL K K +V+A   +++PL   S+  +  QL +  +     A  DDT  T
Sbjct: 1  MSAIVGEWMDELAKLKEKVQA---RRRPLFLSSRPKKEQQLAKEGHVEQKEAAKDDTNET 60

Query: 61 TLSESTICLLIDRFAP 74
          T+SE+T+CLL+DRF P
Sbjct: 61 TMSETTVCLLMDRFVP 73

The following BLAST results are available for this feature:

BLAST of Cla97C09G179110 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61756.1	2.7e-22	81.58	hypothetical protein Csa_006080 [Cucumis sativus]	[more]
KAG6571144.1	2.7e-14	71.23	hypothetical protein SDJN03_30059, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6605111.1	7.5e-12	55.34	hypothetical protein SDJN03_02428, partial [Cucurbita argyrosperma subsp. sorori...	[more]
OMO75267.1	3.4e-04	43.42	hypothetical protein CCACVL1_16259 [Corchorus capsularis] >OMO92173.1 hypothetic...	[more]

BLAST of Cla97C09G179110 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C09G179110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LP24	1.3e-22	81.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237740 PE=4 SV=1	[more]
A0A1R3HY48	1.6e-04	43.42	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_16259 PE=4 ...	[more]
A0A1R3JBF3	1.6e-04	43.42	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_17779 PE=4 SV=1	[more]

BLAST of Cla97C09G179110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..56
None	No IPR available	PANTHER	PTHR36346:SF2	EXPRESSED PROTEIN	coord: 1..74
None	No IPR available	PANTHER	PTHR36346	EXPRESSED PROTEIN	coord: 1..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C09G179110.1	Cla97C09G179110.1	mRNA