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Sed0017866 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATAACTCCCAGTTCTTATTTGTTCTTCTTTATCCTTTAAATATATATTTCACTAAACAAACTTATCATTTTGCACTTACAAACAAACACATTCAAGTTTTCTTCATCATTTCACTGATCCAACAATGACTTCTGGGCCTCACAGAGAAGCAGAAGAATCTGCCATTAGCAAGGATACCTCCAAGGTTTGCTATTTGGATTTCATTTTTTTCTCTTCTTTTTCAAACTGTTTGTATGATTTTTATCATTATTTTATTATATTTTTTGTTCTAACATTTCTGATCTTTGATTCTATAGGGAACCACCATAATTTATCCGAAAGGACTCAACATCACATGGGGGAATGATGATCGCTATTGGCATATCATCCACTCCCCCGAGTAAGTGTCTCTCTCTTTAAAACGCGTTAAGAATATGAATAAAAGAATAAATTTATCGCTCTATATCTATATGATTAAGCTTTTGGTTCTATATGAGTTTGAATCATGATATCATTTAATATTTTAGGATCTTTTCTTGCCAACCAAATTTAGTAGATTAGGCAATATTTAATTTTTTCTTGTTTATGCACACCTTTACTATTTTAGATTTCTTTGGCTACTCAGCTAACCAAAATTGTCTGCTCCCCCAAAACCTTCTCTTCTAATATGTTTATATATATATATATATAGAAGAAAGATAAAGAAAGAGATTTATTATGGTTGAATTATGTTAAATAATTACAAATTAACTTAAAAGTTTAAATTGGTGGGTTAGAATAAATTTAATTATATTAACTAGCACTCCTCACATGTGGGGTTGAAAAATTTAAGAATATCTATCAAATAGAAATCAATATTAATCGAGGATGAAATGACACAGTCCAAATAGTACTCTCGAAGCAAACTTTATTTGTTATTTTCAAATGCATAATTTTATGCCTGTTTTTGGTTTTAGGTCCTAGAAGTTCGTAAGGCATGATTTAATCTTGTTTTCATAAATTTTTTTTTTTTTTTGAACAAGAGTAACCACGTCCGTCCCTAAGTCAGACACCGGTTTTCATAAAAACTTCATTCTAAATACTTTTGATACAGACTTCTTATAAACCTATAGATGTGTTCATTTTTGTCAAAAAATTAAAGTTGTCTTTGGTACGTTTCCTAACCGATGTCAAGAAATTAAAATTTTTGAACCCTTCGTGGGATCTAAGGTTTAGTGTACAGTTAGGCACCGTCTTCCAATTCCTCCCACATCACACCAATTTTGCTTACCAAAAATGACTCACTGGGGAAGAAGATCTGAACTTAGGACCTCCATTTTTAATATCATATTAAATCACCAATCAATCCAAAAAGTAAGCCGATAAGTTAGTAAATTTAATCATATATCAAACAATAATTATATGATGTCAAATAATTTTTTTGGATTAATTGGCAATCTAACATAATGATTTCGTGACAATAACTTCCCATAATTTTTTTGCAGGAAAAGTTTGTATGTAGCAGAGCTAAAGCAAGTATCATGGCTTGAAGTGACATGTTCAACAGATAATGTAAAAATTGGGAAGAAATACAATGTTGGTTTCAATATTTCAATGAGACCAGATTCATTTGGATGGGATGGAGTTGATGTTTATGTAATGGCTAAGGTTGGGAAGTCAGGGAAGTTCACTCCCATGAAAGTTTGTCTTGGAAATGAAAAACCAAATAAAAAGTTCACAATTCCTAAAAAGCCCTTAGAAATTGAAGTTCAAGATTCAACACCCCCAGGACAAATTAGAACAATCCATCTTGGTTTGTATGAAGTTTGGAGTTCAAAGTGGAAAGGGGGGTTGCAGATCCATGATGCATTCATTAACCAGATTGATGTTTGACTAAACTTTATGAGCTATAAACTTGTCAGAGACATGATATTTCATTTGTTTTTATTGTTTTCATGATTATGTTTGTTTTGATGTTTAATTAAGTAAAAGGAAACATGTCTTCCCAATTGTCATGGTGGATTGTGAGAAAATGTTTATAGCTTAATGAAAATATTGATATTGTACTTTA GATAACTCCCAGTTCTTATTTGTTCTTCTTTATCCTTTAAATATATATTTCACTAAACAAACTTATCATTTTGCACTTACAAACAAACACATTCAAGTTTTCTTCATCATTTCACTGATCCAACAATGACTTCTGGGCCTCACAGAGAAGCAGAAGAATCTGCCATTAGCAAGGATACCTCCAAGGGAACCACCATAATTTATCCGAAAGGACTCAACATCACATGGGGGAATGATGATCGCTATTGGCATATCATCCACTCCCCCGAGAAAAGTTTGTATGTAGCAGAGCTAAAGCAAGTATCATGGCTTGAAGTGACATGTTCAACAGATAATGTAAAAATTGGGAAGAAATACAATGTTGGTTTCAATATTTCAATGAGACCAGATTCATTTGGATGGGATGGAGTTGATGTTTATGTAATGGCTAAGGTTGGGAAGTCAGGGAAGTTCACTCCCATGAAAGTTTGTCTTGGAAATGAAAAACCAAATAAAAAGTTCACAATTCCTAAAAAGCCCTTAGAAATTGAAGTTCAAGATTCAACACCCCCAGGACAAATTAGAACAATCCATCTTGGTTTGTATGAAGTTTGGAGTTCAAAGTGGAAAGGGGGGTTGCAGATCCATGATGCATTCATTAACCAGATTGATGTTTGACTAAACTTTATGAGCTATAAACTTGTCAGAGACATGATATTTCATTTGTTTTTATTGTTTTCATGATTATGTTTGTTTTGATGTTTAATTAAGTAAAAGGAAACATGTCTTCCCAATTGTCATGGTGGATTGTGAGAAAATGTTTATAGCTTAATGAAAATATTGATATTGTACTTTA ATGACTTCTGGGCCTCACAGAGAAGCAGAAGAATCTGCCATTAGCAAGGATACCTCCAAGGGAACCACCATAATTTATCCGAAAGGACTCAACATCACATGGGGGAATGATGATCGCTATTGGCATATCATCCACTCCCCCGAGAAAAGTTTGTATGTAGCAGAGCTAAAGCAAGTATCATGGCTTGAAGTGACATGTTCAACAGATAATGTAAAAATTGGGAAGAAATACAATGTTGGTTTCAATATTTCAATGAGACCAGATTCATTTGGATGGGATGGAGTTGATGTTTATGTAATGGCTAAGGTTGGGAAGTCAGGGAAGTTCACTCCCATGAAAGTTTGTCTTGGAAATGAAAAACCAAATAAAAAGTTCACAATTCCTAAAAAGCCCTTAGAAATTGAAGTTCAAGATTCAACACCCCCAGGACAAATTAGAACAATCCATCTTGGTTTGTATGAAGTTTGGAGTTCAAAGTGGAAAGGGGGGTTGCAGATCCATGATGCATTCATTAACCAGATTGATGTTTGA MTSGPHREAEESAISKDTSKGTTIIYPKGLNITWGNDDRYWHIIHSPEKSLYVAELKQVSWLEVTCSTDNVKIGKKYNVGFNISMRPDSFGWDGVDVYVMAKVGKSGKFTPMKVCLGNEKPNKKFTIPKKPLEIEVQDSTPPGQIRTIHLGLYEVWSSKWKGGLQIHDAFINQIDV Homology
BLAST of Sed0017866 vs. NCBI nr
Match: XP_022142416.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia]) HSP 1 Score: 261.5 bits (667), Expect = 5.1e-66 Identity = 125/174 (71.84%), Postives = 147/174 (84.48%), Query Frame = 0
BLAST of Sed0017866 vs. NCBI nr
Match: XP_022142415.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia]) HSP 1 Score: 255.4 bits (651), Expect = 3.6e-64 Identity = 121/175 (69.14%), Postives = 145/175 (82.86%), Query Frame = 0
BLAST of Sed0017866 vs. NCBI nr
Match: XP_008459054.1 (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo] >KAA0043232.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo var. makuwa]) HSP 1 Score: 255.0 bits (650), Expect = 4.8e-64 Identity = 123/175 (70.29%), Postives = 144/175 (82.29%), Query Frame = 0
BLAST of Sed0017866 vs. NCBI nr
Match: XP_038894850.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]) HSP 1 Score: 253.1 bits (645), Expect = 1.8e-63 Identity = 122/172 (70.93%), Postives = 140/172 (81.40%), Query Frame = 0
BLAST of Sed0017866 vs. NCBI nr
Match: XP_022994910.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita maxima]) HSP 1 Score: 243.8 bits (621), Expect = 1.1e-60 Identity = 116/176 (65.91%), Postives = 139/176 (78.98%), Query Frame = 0
BLAST of Sed0017866 vs. ExPASy Swiss-Prot
Match: Q9SA16 (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 3.0e-29 Identity = 70/181 (38.67%), Postives = 101/181 (55.80%), Query Frame = 0
BLAST of Sed0017866 vs. ExPASy Swiss-Prot
Match: C0HJV2 (Lectin OS=Luffa acutangula OX=56866 PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 9.8e-04 Identity = 24/81 (29.63%), Postives = 35/81 (43.21%), Query Frame = 0
BLAST of Sed0017866 vs. ExPASy TrEMBL
Match: A0A6J1CM42 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC111012557 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 2.5e-66 Identity = 125/174 (71.84%), Postives = 147/174 (84.48%), Query Frame = 0
BLAST of Sed0017866 vs. ExPASy TrEMBL
Match: A0A6J1CKW1 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC111012556 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 1.8e-64 Identity = 121/175 (69.14%), Postives = 145/175 (82.86%), Query Frame = 0
BLAST of Sed0017866 vs. ExPASy TrEMBL
Match: A0A5A7TIU6 (Protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G001140 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 2.3e-64 Identity = 123/175 (70.29%), Postives = 144/175 (82.29%), Query Frame = 0
BLAST of Sed0017866 vs. ExPASy TrEMBL
Match: A0A1S3C9E6 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo OX=3656 GN=LOC103498278 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 2.3e-64 Identity = 123/175 (70.29%), Postives = 144/175 (82.29%), Query Frame = 0
BLAST of Sed0017866 vs. ExPASy TrEMBL
Match: A0A6J1K2M8 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucurbita maxima OX=3661 GN=LOC111490494 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 5.3e-61 Identity = 116/176 (65.91%), Postives = 139/176 (78.98%), Query Frame = 0
BLAST of Sed0017866 vs. TAIR 10
Match: AT1G31200.1 (phloem protein 2-A9 ) HSP 1 Score: 129.8 bits (325), Expect = 2.2e-30 Identity = 70/181 (38.67%), Postives = 101/181 (55.80%), Query Frame = 0
BLAST of Sed0017866 vs. TAIR 10
Match: AT1G10155.1 (phloem protein 2-A10 ) HSP 1 Score: 125.9 bits (315), Expect = 3.1e-29 Identity = 70/178 (39.33%), Postives = 95/178 (53.37%), Query Frame = 0
BLAST of Sed0017866 vs. TAIR 10
Match: AT1G80110.1 (phloem protein 2-B11 ) HSP 1 Score: 43.9 bits (102), Expect = 1.6e-04 Identity = 20/39 (51.28%), Postives = 24/39 (61.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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