Cla97C04G072150.1 (mRNA) Watermelon (97103) v2.5

Overview
NameCla97C04G072150.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionProteasome subunit beta
LocationCla97Chr04: 18856079 .. 18858324 (+)
Sequence length345
RNA-Seq ExpressionCla97C04G072150.1
SyntenyCla97C04G072150.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGCCTTTTATAGACTTCCAAGGGGTTAGTGTTTCTTTAAAATGCCTTTCAGCTCTTTCCTAATTAATATGGATGGAATAAATTCAAATTTGATATGATTTTGATCGAATTTTAGAAGAATTTTCAAATTGTAAAAAAACTAAAACTTTCTATTTTTTGAAGGTTGTGGCTACAATTCAATCGGAACCTGGACACAACTTTGACTCTTCCTTACAACATTGTGCTCTGTCATTTAAAGCCTTGTGACCTCAATTCAATCACAACTTTAACAATTTATGCAAATGACCTAAAAATACAAGAATTGCTCAAATTTTGACTCTCTTTTTACATATTTTACATTATTTCGTTGTTAAGCTTAAGACACATGCATGACTTGTTTTTGCATAAAATTATTGAGTTATCGATCCCAAAAATGACAACAATTTAGTGCTTACCCTTGACTGTTTTTTTAACGTTGACTCGTGGTCATCTCCATCCTAGTGCAACATGTACTTTCGGTAGGTTTTTTTCTTGGTCAATAAAATTTCAAACAAATTAAGGTATATGCCTTAGGTCATCCTATTATTCTATAAGAATTTAGAAAGGGAGCAAACTGTAGACTTGTTTATTTTTTTTTCCTTTAATAATAATAATAATAATAAAGTAATAAACAAAATAAAATAAAATAACTCATATTTCATCATTTTTACCTTAATACACCATCCAATGAAATCTTTCACCTAGGCATGTTTTTCATCATATGGAATTTTTGTTATTCAAAACTTTGCAAATTTTATTGATTTGATAAGTATACATTTGTATGTCATATATTTTATTGTCTTTTTTTTTTACTTGATCATTTTTTTTTTGAATTATTAAAATATTTTTTTGTCATTTTTTCTTTTTGAAAAATTTGAGAAATATTGTAAAATTGAGGAGCACAACGGGAACACAGATATGGAGAAAATATAATATAATAAATAAAAGAAAAAAATAACAACATATAAAATAATGAAAATAGGAATTTATGGAAATTCTATGGAAATTTAGAAATGAATTTTCTCACCAATGTGTATTCTCTCAAGATCTACCAAATGCTACTATTTATAGATAAATTGGTAAGTTGGATACTAAGCATGGATACATAATGAGCATCTATTATTATTATAATATTTATAATACTTTTCCTTAGATACTCATTATATATATGAAATATGTCTCATTAAAACCTTATTATAAAAAAGAAAAAACCAATAGAAAAACAATCGCAGTAAAAGAAAAAGAATACATATGTCATATAATCTAATTACTTCTAAAAGAATACAATACATTTGCTCTTTCTCATATAAACATCACTTGAGATATCTGAATTGCCGTATTCCAATATTCTGCAACAATTTTTCAAAGGTTGCAATAGATCTCACAGGATATCGCATCCAGCTCTCACCGCTCTCGTCTGGTCCAGATCTCGCCACCGGTGGATATTTTGGGGAGAGAAAGAGTAGCAGAGCAGCAGGAGCAGGACCTCGCTACTTCTCGGCTGCCTCCTTTTGCTTCGCCATTTTCAAGTTTGCTGTTTGTTTGATTACTTGTTTGGGTTTAAGGTTTTGGGGGGTTTATTCTGGTGTGTAGTGAATTTTGTTTCTGGGTACTAATTCCCTAATTTTGCTCTCCCTAATTTCTATCGAATAATAGGGTTGAAAAAACAAAGGGCTGAATCATGTTTATCCATCTTTTATTTATTCATTTTGGTTTCCAACTCATCATGTCTTTATCTCCAGCAATAAGCATCTAACTCTCCCTAGTTCAGAATGTGCATGTACAGACATGCTATCACCATAGCTTTTCTGTTCTATGGTTCATAGCTAACATATGATTATTTCTGTATTTCATCTCCCTTGTGTTTCAATATCTAGGGATTTATCTTCCTTTTCATATCTTAAATTTATCTATCAAGTTCTGTTCTAGCACAAATCACTTAGTTCTTGGGGGCTTTTAGACTGTACCACTGAAGCTAGTAAAATTTTTCAAGTGCTTATTTGTATTTTGTAATTGTATACTACTCTTGGGTCTTACTGGACTAATTGTGTCTATTTCAGAATCCATACTCTGTTAATATCCTCTTGGCTGGCTATGACAACCAGACTGGCCCATCACTTTACTACATCGATTACATTGCAATGCTTCACAAGGTTGAGAAAGGTGCTTTTGGTTACGGATCCTACTTTTCACTCTCTATGATGGATATTAGGGTCTGTTACTAA

mRNA sequence

ATGACGCCTTTTATAGACTTCCAAGGGGATATCGCATCCAGCTCTCACCGCTCTCGTCTGGTCCAGATCTCGCCACCGGTGGATATTTTGGGGAGAGAAAGAGTAGCAGAGCAGCAGGAGCAGGACCTCGCTACTTCTCGGCTGCCTCCTTTTGCTTCGCCATTTTCAAGTTTGCTGTTTAATCCATACTCTGTTAATATCCTCTTGGCTGGCTATGACAACCAGACTGGCCCATCACTTTACTACATCGATTACATTGCAATGCTTCACAAGGTTGAGAAAGGTGCTTTTGGTTACGGATCCTACTTTTCACTCTCTATGATGGATATTAGGGTCTGTTACTAA

Coding sequence (CDS)

ATGACGCCTTTTATAGACTTCCAAGGGGATATCGCATCCAGCTCTCACCGCTCTCGTCTGGTCCAGATCTCGCCACCGGTGGATATTTTGGGGAGAGAAAGAGTAGCAGAGCAGCAGGAGCAGGACCTCGCTACTTCTCGGCTGCCTCCTTTTGCTTCGCCATTTTCAAGTTTGCTGTTTAATCCATACTCTGTTAATATCCTCTTGGCTGGCTATGACAACCAGACTGGCCCATCACTTTACTACATCGATTACATTGCAATGCTTCACAAGGTTGAGAAAGGTGCTTTTGGTTACGGATCCTACTTTTCACTCTCTATGATGGATATTAGGGTCTGTTACTAA

Protein sequence

MTPFIDFQGDIASSSHRSRLVQISPPVDILGRERVAEQQEQDLATSRLPPFASPFSSLLFNPYSVNILLAGYDNQTGPSLYYIDYIAMLHKVEKGAFGYGSYFSLSMMDIRVCY
Homology
[Close]
BLAST of Cla97C04G072150.1 vs. NCBI nr
Match: XP_012069674.1 (proteasome subunit beta type-2-A [Jatropha curcas] >KDP40206.1 hypothetical protein JCGZ_02204 [Jatropha curcas])

HSP 1 Score: 100.9 bits (250), Expect = 7.5e-18
Identity = 47/54 (87.04%), Postives = 51/54 (94.44%), Query Frame = 0 

Query: 56  SSLLFNPYSVNILLAGYDNQTGPSLYYIDYIAMLHKVEKGAFGYGSYFSLSMMD 110
           ++L  NPYSVNILLAGYDN+TGPSLYYIDYIA LHKV+KGAFGYGSYFSLSMMD
Sbjct: 90  TALRKNPYSVNILLAGYDNETGPSLYYIDYIATLHKVDKGAFGYGSYFSLSMMD 143

[Close]
BLAST of Cla97C04G072150.1 vs. NCBI nr
Match: XP_030488509.1 (proteasome subunit beta type-2-B [Cannabis sativa])

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-17
Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 0 

Query: 56  SSLLFNPYSVNILLAGYDNQTGPSLYYIDYIAMLHKVEKGAFGYGSYFSLSMMD 110
           ++L  NPYSVNILLAGYD +TGPSLYYIDYIA LHKVEKGAFGYGSYFSLSMMD
Sbjct: 90  TALRKNPYSVNILLAGYDKETGPSLYYIDYIATLHKVEKGAFGYGSYFSLSMMD 143

[Close]
BLAST of Cla97C04G072150.1 vs. NCBI nr
Match: XP_023539479.1 (proteasome subunit beta type-2-A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-17
Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 0 

Query: 56  SSLLFNPYSVNILLAGYDNQTGPSLYYIDYIAMLHKVEKGAFGYGSYFSLSMMD 110
           ++L  NPYSVNILLAGYD QTGPSLYYIDYIA LHKVEKGAFGYGSYFSL+MMD
Sbjct: 90  TALRKNPYSVNILLAGYDKQTGPSLYYIDYIATLHKVEKGAFGYGSYFSLAMMD 143

[Close]
BLAST of Cla97C04G072150.1 vs. NCBI nr
Match: KAF7806876.1 (Proteasome subunit beta type-2-A [Senna tora])

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-17
Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 0 

Query: 56  SSLLFNPYSVNILLAGYDNQTGPSLYYIDYIAMLHKVEKGAFGYGSYFSLSMMD 110
           ++L  NPYSVNILLAGYD +TGPSLYYIDYIA LHKVEKGAFGYGSYFSLSMMD
Sbjct: 90  TALRKNPYSVNILLAGYDKETGPSLYYIDYIATLHKVEKGAFGYGSYFSLSMMD 143

[Close]
BLAST of Cla97C04G072150.1 vs. NCBI nr
Match: XP_030488508.1 (proteasome subunit beta type-2-B [Cannabis sativa])

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-17
Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 0 

Query: 56  SSLLFNPYSVNILLAGYDNQTGPSLYYIDYIAMLHKVEKGAFGYGSYFSLSMMD 110
           ++L  NPYSVNILLAGYD +TGPSLYYIDYIA LHKVEKGAFGYGSYFSLSMMD
Sbjct: 90  TALRKNPYSVNILLAGYDKETGPSLYYIDYIATLHKVEKGAFGYGSYFSLSMMD 143

[Close]
BLAST of Cla97C04G072150.1 vs. ExPASy Swiss-Prot
Match: O23714 (Proteasome subunit beta type-2-A OS=Arabidopsis thaliana OX=3702 GN=PBD1 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.7e-18
Identity = 42/54 (77.78%), Postives = 49/54 (90.74%), Query Frame = 0 

Query: 56  SSLLFNPYSVNILLAGYDNQTGPSLYYIDYIAMLHKVEKGAFGYGSYFSLSMMD 110
           ++L  NPYSVNIL+AGYD+++G SLYYIDYIA LHKV+KGAFGYGSYFSLS MD
Sbjct: 90  TALRKNPYSVNILMAGYDDESGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMD 143

[Close]
BLAST of Cla97C04G072150.1 vs. ExPASy Swiss-Prot
Match: O24633 (Proteasome subunit beta type-2-B OS=Arabidopsis thaliana OX=3702 GN=PBD2 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-17
Identity = 42/54 (77.78%), Postives = 47/54 (87.04%), Query Frame = 0 

Query: 56  SSLLFNPYSVNILLAGYDNQTGPSLYYIDYIAMLHKVEKGAFGYGSYFSLSMMD 110
           ++L  NPYSVNIL+AGYD + G SLYYIDYIA LHKV+KGAFGYGSYFSLS MD
Sbjct: 90  TALRKNPYSVNILMAGYDKEAGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMD 143

[Close]
BLAST of Cla97C04G072150.1 vs. ExPASy Swiss-Prot
Match: Q9LST6 (Proteasome subunit beta type-2 OS=Oryza sativa subsp. japonica OX=39947 GN=PBD1 PE=2 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 1.9e-16
Identity = 39/54 (72.22%), Postives = 45/54 (83.33%), Query Frame = 0 

Query: 56  SSLLFNPYSVNILLAGYDNQTGPSLYYIDYIAMLHKVEKGAFGYGSYFSLSMMD 110
           ++L  NPY VN+LLAGYD+  G SLYYIDYIA  HK+EKGAFGYGSYF LS+MD
Sbjct: 90  TALRKNPYYVNVLLAGYDSDVGASLYYIDYIATFHKIEKGAFGYGSYFCLSLMD 143

[Close]
BLAST of Cla97C04G072150.1 vs. ExPASy Swiss-Prot
Match: Q5E9K0 (Proteasome subunit beta type-2 OS=Bos taurus OX=9913 GN=PSMB2 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.7e-09
Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 0 

Query: 62  PYSVNILLAGYDNQTGPSLYYIDYIAMLHKVEKGAFGYGSYFSLSMMD 110
           PY VN+LLAGYD   GP+LYY+DY+A L K    A GYG++ +LS++D
Sbjct: 97  PYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILD 144

[Close]
BLAST of Cla97C04G072150.1 vs. ExPASy Swiss-Prot
Match: P49721 (Proteasome subunit beta type-2 OS=Homo sapiens OX=9606 GN=PSMB2 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.7e-09
Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 0 

Query: 62  PYSVNILLAGYDNQTGPSLYYIDYIAMLHKVEKGAFGYGSYFSLSMMD 110
           PY VN+LLAGYD   GP+LYY+DY+A L K    A GYG++ +LS++D
Sbjct: 97  PYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILD 144

[Close]
BLAST of Cla97C04G072150.1 vs. ExPASy TrEMBL
Match: A0A067KVK4 (Proteasome subunit beta OS=Jatropha curcas OX=180498 GN=JCGZ_02204 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 3.6e-18
Identity = 47/54 (87.04%), Postives = 51/54 (94.44%), Query Frame = 0 

Query: 56  SSLLFNPYSVNILLAGYDNQTGPSLYYIDYIAMLHKVEKGAFGYGSYFSLSMMD 110
           ++L  NPYSVNILLAGYDN+TGPSLYYIDYIA LHKV+KGAFGYGSYFSLSMMD
Sbjct: 90  TALRKNPYSVNILLAGYDNETGPSLYYIDYIATLHKVDKGAFGYGSYFSLSMMD 143

[Close]
BLAST of Cla97C04G072150.1 vs. ExPASy TrEMBL
Match: A0A6J1CE80 (Proteasome subunit beta OS=Momordica charantia OX=3673 GN=LOC111009899 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 8.0e-18
Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 0 

Query: 56  SSLLFNPYSVNILLAGYDNQTGPSLYYIDYIAMLHKVEKGAFGYGSYFSLSMMD 110
           ++L  NPYSVNILLAGYD +TGPSLYYIDYIA LHKVEKGAFGYGSYFSLSMMD
Sbjct: 90  TALRKNPYSVNILLAGYDKETGPSLYYIDYIATLHKVEKGAFGYGSYFSLSMMD 143

[Close]
BLAST of Cla97C04G072150.1 vs. ExPASy TrEMBL
Match: A0A7J6HWS7 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_022739 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 8.0e-18
Identity = 46/51 (90.20%), Postives = 48/51 (94.12%), Query Frame = 0 

Query: 59  LFNPYSVNILLAGYDNQTGPSLYYIDYIAMLHKVEKGAFGYGSYFSLSMMD 110
           + NPYSVNILLAGYD +TGPSLYYIDYIA LHKVEKGAFGYGSYFSLSMMD
Sbjct: 141 VLNPYSVNILLAGYDKETGPSLYYIDYIATLHKVEKGAFGYGSYFSLSMMD 191

[Close]
BLAST of Cla97C04G072150.1 vs. ExPASy TrEMBL
Match: A0A7J6FP32 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_027137 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 8.0e-18
Identity = 46/51 (90.20%), Postives = 48/51 (94.12%), Query Frame = 0 

Query: 59  LFNPYSVNILLAGYDNQTGPSLYYIDYIAMLHKVEKGAFGYGSYFSLSMMD 110
           + NPYSVNILLAGYD +TGPSLYYIDYIA LHKVEKGAFGYGSYFSLSMMD
Sbjct: 141 VLNPYSVNILLAGYDKETGPSLYYIDYIATLHKVEKGAFGYGSYFSLSMMD 191

[Close]
BLAST of Cla97C04G072150.1 vs. ExPASy TrEMBL
Match: A0A6J1KYM9 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111499391 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.0e-17
Identity = 46/54 (85.19%), Postives = 50/54 (92.59%), Query Frame = 0 

Query: 56  SSLLFNPYSVNILLAGYDNQTGPSLYYIDYIAMLHKVEKGAFGYGSYFSLSMMD 110
           ++L  NPYSVN+LLAGYD +TGPSLYYIDYIA LHKVEKGAFGYGSYFSLSMMD
Sbjct: 90  TALRKNPYSVNVLLAGYDKETGPSLYYIDYIATLHKVEKGAFGYGSYFSLSMMD 143

[Close]
BLAST of Cla97C04G072150.1 vs. TAIR 10
Match: AT4G14800.2 (20S proteasome beta subunit D2 )

HSP 1 Score: 94.4 bits (233), Expect = 6.5e-20
Identity = 47/73 (64.38%), Postives = 54/73 (73.97%), Query Frame = 0 

Query: 42  DLATSRLPPFASPFSS-----LLFNPYSVNILLAGYDNQTGPSLYYIDYIAMLHKVEKGA 101
           +LAT+    F + F       +L NPYSVNIL+AGYD + G SLYYIDYIA LHKV+KGA
Sbjct: 87  ELATALRKEFCATFQGYSDFCVLMNPYSVNILMAGYDKEAGASLYYIDYIATLHKVDKGA 146

Query: 102 FGYGSYFSLSMMD 110
           FGYGSYFSLS MD
Sbjct: 147 FGYGSYFSLSTMD 159

[Close]
BLAST of Cla97C04G072150.1 vs. TAIR 10
Match: AT3G22630.1 (20S proteasome beta subunit D1 )

HSP 1 Score: 91.3 bits (225), Expect = 5.5e-19
Identity = 42/54 (77.78%), Postives = 49/54 (90.74%), Query Frame = 0 

Query: 56  SSLLFNPYSVNILLAGYDNQTGPSLYYIDYIAMLHKVEKGAFGYGSYFSLSMMD 110
           ++L  NPYSVNIL+AGYD+++G SLYYIDYIA LHKV+KGAFGYGSYFSLS MD
Sbjct: 90  TALRKNPYSVNILMAGYDDESGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMD 143

[Close]
BLAST of Cla97C04G072150.1 vs. TAIR 10
Match: AT4G14800.1 (20S proteasome beta subunit D2 )

HSP 1 Score: 90.5 bits (223), Expect = 9.4e-19
Identity = 42/54 (77.78%), Postives = 47/54 (87.04%), Query Frame = 0 

Query: 56  SSLLFNPYSVNILLAGYDNQTGPSLYYIDYIAMLHKVEKGAFGYGSYFSLSMMD 110
           ++L  NPYSVNIL+AGYD + G SLYYIDYIA LHKV+KGAFGYGSYFSLS MD
Sbjct: 90  TALRKNPYSVNILMAGYDKEAGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMD 143

The following BLAST results are available for this feature:
BLAST of Cla97C04G072150.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_012069674.17.5e-1887.04proteasome subunit beta type-2-A [Jatropha curcas] >KDP40206.1 hypothetical prot... [more]
XP_030488509.11.7e-1787.04proteasome subunit beta type-2-B [Cannabis sativa][more]
XP_023539479.11.7e-1787.04proteasome subunit beta type-2-A-like [Cucurbita pepo subsp. pepo][more]
KAF7806876.11.7e-1787.04Proteasome subunit beta type-2-A [Senna tora][more]
XP_030488508.11.7e-1787.04proteasome subunit beta type-2-B [Cannabis sativa][more]
BLAST of Cla97C04G072150.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O237147.7e-1877.78Proteasome subunit beta type-2-A OS=Arabidopsis thaliana OX=3702 GN=PBD1 PE=1 SV... [more]
O246331.3e-1777.78Proteasome subunit beta type-2-B OS=Arabidopsis thaliana OX=3702 GN=PBD2 PE=1 SV... [more]
Q9LST61.9e-1672.22Proteasome subunit beta type-2 OS=Oryza sativa subsp. japonica OX=39947 GN=PBD1 ... [more]
Q5E9K01.7e-0956.25Proteasome subunit beta type-2 OS=Bos taurus OX=9913 GN=PSMB2 PE=1 SV=1[more]
P497211.7e-0956.25Proteasome subunit beta type-2 OS=Homo sapiens OX=9606 GN=PSMB2 PE=1 SV=1[more]
BLAST of Cla97C04G072150.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A067KVK43.6e-1887.04Proteasome subunit beta OS=Jatropha curcas OX=180498 GN=JCGZ_02204 PE=3 SV=1[more]
A0A6J1CE808.0e-1887.04Proteasome subunit beta OS=Momordica charantia OX=3673 GN=LOC111009899 PE=3 SV=1[more]
A0A7J6HWS78.0e-1890.20Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_022739 PE=4 SV=1[more]
A0A7J6FP328.0e-1890.20Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_027137 PE=4 SV=1[more]
A0A6J1KYM91.0e-1785.19Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111499391 PE=3 SV=1[more]
BLAST of Cla97C04G072150.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G14800.26.5e-2064.3820S proteasome beta subunit D2 [more]
AT3G22630.15.5e-1977.7820S proteasome beta subunit D1 [more]
AT4G14800.19.4e-1977.7820S proteasome beta subunit D2 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1coord: 43..112
e-value: 1.9E-10
score: 42.6
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 51..109
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 60..109
e-value: 1.2E-8
score: 34.7
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 58..110
NoneNo IPR availablePANTHERPTHR11599:SF181PROTEASOME SUBUNIT BETA TYPE-2-Bcoord: 58..110

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C04G072150Cla97C04G072150gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C04G072150.1-exonCla97C04G072150.1-exon-Cla97Chr04:18856079..18856105exon
Cla97C04G072150.1-exonCla97C04G072150.1-exon-Cla97Chr04:18857487..18857639exon
Cla97C04G072150.1-exonCla97C04G072150.1-exon-Cla97Chr04:18858160..18858324exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C04G072150.1-cdsCla97C04G072150.1-cds-Cla97Chr04:18856079..18856105CDS
Cla97C04G072150.1-cdsCla97C04G072150.1-cds-Cla97Chr04:18857487..18857639CDS
Cla97C04G072150.1-cdsCla97C04G072150.1-cds-Cla97Chr04:18858160..18858324CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C04G072150.1Cla97C04G072150.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051603 proteolysis involved in cellular protein catabolic process
cellular_component GO:0005839 proteasome core complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0004298 threonine-type endopeptidase activity